data_8YEL # _entry.id 8YEL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YEL pdb_00008yel 10.2210/pdb8yel/pdb WWPDB D_1300045340 ? ? EMDB EMD-39199 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-09-04 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YEL _pdbx_database_status.recvd_initial_deposition_date 2024-02-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of the channelrhodopsin GtCCR4' _pdbx_database_related.db_id EMD-39199 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email nureki@bs.s.u-tokyo.ac.jp _pdbx_contact_author.name_first Osamu _pdbx_contact_author.name_last Nureki _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-1813-7008 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Tanaka, T.' 1 0000-0001-5728-7573 'Iida, W.' 2 ? 'Sano, F.K.' 3 0000-0002-8965-788X 'Oda, K.' 4 0000-0003-0996-0393 'Shihoya, W.' 5 0000-0003-4813-5740 'Nureki, O.' 6 0000-0003-1813-7008 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Cell _citation.journal_id_ASTM MOCEFL _citation.journal_id_CSD 2168 _citation.journal_id_ISSN 1097-2765 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'The high-light-sensitivity mechanism and optogenetic properties of the bacteriorhodopsin-like channelrhodopsin GtCCR4' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.molcel.2024.08.016 _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tanaka, T.' 1 0000-0001-5728-7573 primary 'Hososhima, H.' 2 ? primary 'Yamashita, Y.' 3 ? primary 'Sugimoto, T.' 4 ? primary 'Nakamura, T.' 5 ? primary 'Shigemura, S.' 6 ? primary 'Iida, W.' 7 ? primary 'Sano, F.K.' 8 0000-0002-8965-788X primary 'Oda, K.' 9 0000-0003-0996-0393 primary 'Uchihashi, T.' 10 ? primary 'Katayama, K.' 11 ? primary 'Furutani, Y.' 12 ? primary 'Tsunoda, S.P.' 13 ? primary 'Shihoya, W.' 14 0000-0003-4813-5740 primary 'Kandori, H.' 15 ? primary 'Nureki, O.' 16 0000-0003-1813-7008 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Cation channel rhodopsin 4' 45933.734 1 ? ? ? ? 2 non-polymer syn RETINAL 284.436 1 ? ? ? ? 3 non-polymer syn 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 790.145 3 ? ? ? ? 4 water nat water 18.015 9 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MKTIIALSYIFCLVFADYKDDDDAMGTTSAPSLSDPNWQYGMGGWNNPRLPNFNLHDPTVIGVDWLGFLCLLGASLALMY KLMSFKGPDGDQEFFVGYREEKCLSIYVNLIAAITYWGRICAHFNNDMGLSLSVNYFKYLDYIFTCPILTLDLLWSLNLP YKITYSLFVGLTIACGVFCNAFEPPARYLWFMFGCFIFAFTWISIIRLVYARFQQFLNEDAKKIRAPLKLSLTLYFSIWC GYPALWLLTEFGAISQLAAHVTTVIMDVAAKSVYGFALLKFQLGVDKRDVWLDELKSVRYRDVVPQIRPSKTREGRMEYS EDGDFMRPSKGKRAEGDYMNPRWDHHDDGRRLPDSREMDEQVHEKDQEISSTMKQIADLNKQLSAMQESEAVENLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MKTIIALSYIFCLVFADYKDDDDAMGTTSAPSLSDPNWQYGMGGWNNPRLPNFNLHDPTVIGVDWLGFLCLLGASLALMY KLMSFKGPDGDQEFFVGYREEKCLSIYVNLIAAITYWGRICAHFNNDMGLSLSVNYFKYLDYIFTCPILTLDLLWSLNLP YKITYSLFVGLTIACGVFCNAFEPPARYLWFMFGCFIFAFTWISIIRLVYARFQQFLNEDAKKIRAPLKLSLTLYFSIWC GYPALWLLTEFGAISQLAAHVTTVIMDVAAKSVYGFALLKFQLGVDKRDVWLDELKSVRYRDVVPQIRPSKTREGRMEYS EDGDFMRPSKGKRAEGDYMNPRWDHHDDGRRLPDSREMDEQVHEKDQEISSTMKQIADLNKQLSAMQESEAVENLYFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 RETINAL RET 3 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE PC1 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 THR n 1 4 ILE n 1 5 ILE n 1 6 ALA n 1 7 LEU n 1 8 SER n 1 9 TYR n 1 10 ILE n 1 11 PHE n 1 12 CYS n 1 13 LEU n 1 14 VAL n 1 15 PHE n 1 16 ALA n 1 17 ASP n 1 18 TYR n 1 19 LYS n 1 20 ASP n 1 21 ASP n 1 22 ASP n 1 23 ASP n 1 24 ALA n 1 25 MET n 1 26 GLY n 1 27 THR n 1 28 THR n 1 29 SER n 1 30 ALA n 1 31 PRO n 1 32 SER n 1 33 LEU n 1 34 SER n 1 35 ASP n 1 36 PRO n 1 37 ASN n 1 38 TRP n 1 39 GLN n 1 40 TYR n 1 41 GLY n 1 42 MET n 1 43 GLY n 1 44 GLY n 1 45 TRP n 1 46 ASN n 1 47 ASN n 1 48 PRO n 1 49 ARG n 1 50 LEU n 1 51 PRO n 1 52 ASN n 1 53 PHE n 1 54 ASN n 1 55 LEU n 1 56 HIS n 1 57 ASP n 1 58 PRO n 1 59 THR n 1 60 VAL n 1 61 ILE n 1 62 GLY n 1 63 VAL n 1 64 ASP n 1 65 TRP n 1 66 LEU n 1 67 GLY n 1 68 PHE n 1 69 LEU n 1 70 CYS n 1 71 LEU n 1 72 LEU n 1 73 GLY n 1 74 ALA n 1 75 SER n 1 76 LEU n 1 77 ALA n 1 78 LEU n 1 79 MET n 1 80 TYR n 1 81 LYS n 1 82 LEU n 1 83 MET n 1 84 SER n 1 85 PHE n 1 86 LYS n 1 87 GLY n 1 88 PRO n 1 89 ASP n 1 90 GLY n 1 91 ASP n 1 92 GLN n 1 93 GLU n 1 94 PHE n 1 95 PHE n 1 96 VAL n 1 97 GLY n 1 98 TYR n 1 99 ARG n 1 100 GLU n 1 101 GLU n 1 102 LYS n 1 103 CYS n 1 104 LEU n 1 105 SER n 1 106 ILE n 1 107 TYR n 1 108 VAL n 1 109 ASN n 1 110 LEU n 1 111 ILE n 1 112 ALA n 1 113 ALA n 1 114 ILE n 1 115 THR n 1 116 TYR n 1 117 TRP n 1 118 GLY n 1 119 ARG n 1 120 ILE n 1 121 CYS n 1 122 ALA n 1 123 HIS n 1 124 PHE n 1 125 ASN n 1 126 ASN n 1 127 ASP n 1 128 MET n 1 129 GLY n 1 130 LEU n 1 131 SER n 1 132 LEU n 1 133 SER n 1 134 VAL n 1 135 ASN n 1 136 TYR n 1 137 PHE n 1 138 LYS n 1 139 TYR n 1 140 LEU n 1 141 ASP n 1 142 TYR n 1 143 ILE n 1 144 PHE n 1 145 THR n 1 146 CYS n 1 147 PRO n 1 148 ILE n 1 149 LEU n 1 150 THR n 1 151 LEU n 1 152 ASP n 1 153 LEU n 1 154 LEU n 1 155 TRP n 1 156 SER n 1 157 LEU n 1 158 ASN n 1 159 LEU n 1 160 PRO n 1 161 TYR n 1 162 LYS n 1 163 ILE n 1 164 THR n 1 165 TYR n 1 166 SER n 1 167 LEU n 1 168 PHE n 1 169 VAL n 1 170 GLY n 1 171 LEU n 1 172 THR n 1 173 ILE n 1 174 ALA n 1 175 CYS n 1 176 GLY n 1 177 VAL n 1 178 PHE n 1 179 CYS n 1 180 ASN n 1 181 ALA n 1 182 PHE n 1 183 GLU n 1 184 PRO n 1 185 PRO n 1 186 ALA n 1 187 ARG n 1 188 TYR n 1 189 LEU n 1 190 TRP n 1 191 PHE n 1 192 MET n 1 193 PHE n 1 194 GLY n 1 195 CYS n 1 196 PHE n 1 197 ILE n 1 198 PHE n 1 199 ALA n 1 200 PHE n 1 201 THR n 1 202 TRP n 1 203 ILE n 1 204 SER n 1 205 ILE n 1 206 ILE n 1 207 ARG n 1 208 LEU n 1 209 VAL n 1 210 TYR n 1 211 ALA n 1 212 ARG n 1 213 PHE n 1 214 GLN n 1 215 GLN n 1 216 PHE n 1 217 LEU n 1 218 ASN n 1 219 GLU n 1 220 ASP n 1 221 ALA n 1 222 LYS n 1 223 LYS n 1 224 ILE n 1 225 ARG n 1 226 ALA n 1 227 PRO n 1 228 LEU n 1 229 LYS n 1 230 LEU n 1 231 SER n 1 232 LEU n 1 233 THR n 1 234 LEU n 1 235 TYR n 1 236 PHE n 1 237 SER n 1 238 ILE n 1 239 TRP n 1 240 CYS n 1 241 GLY n 1 242 TYR n 1 243 PRO n 1 244 ALA n 1 245 LEU n 1 246 TRP n 1 247 LEU n 1 248 LEU n 1 249 THR n 1 250 GLU n 1 251 PHE n 1 252 GLY n 1 253 ALA n 1 254 ILE n 1 255 SER n 1 256 GLN n 1 257 LEU n 1 258 ALA n 1 259 ALA n 1 260 HIS n 1 261 VAL n 1 262 THR n 1 263 THR n 1 264 VAL n 1 265 ILE n 1 266 MET n 1 267 ASP n 1 268 VAL n 1 269 ALA n 1 270 ALA n 1 271 LYS n 1 272 SER n 1 273 VAL n 1 274 TYR n 1 275 GLY n 1 276 PHE n 1 277 ALA n 1 278 LEU n 1 279 LEU n 1 280 LYS n 1 281 PHE n 1 282 GLN n 1 283 LEU n 1 284 GLY n 1 285 VAL n 1 286 ASP n 1 287 LYS n 1 288 ARG n 1 289 ASP n 1 290 VAL n 1 291 TRP n 1 292 LEU n 1 293 ASP n 1 294 GLU n 1 295 LEU n 1 296 LYS n 1 297 SER n 1 298 VAL n 1 299 ARG n 1 300 TYR n 1 301 ARG n 1 302 ASP n 1 303 VAL n 1 304 VAL n 1 305 PRO n 1 306 GLN n 1 307 ILE n 1 308 ARG n 1 309 PRO n 1 310 SER n 1 311 LYS n 1 312 THR n 1 313 ARG n 1 314 GLU n 1 315 GLY n 1 316 ARG n 1 317 MET n 1 318 GLU n 1 319 TYR n 1 320 SER n 1 321 GLU n 1 322 ASP n 1 323 GLY n 1 324 ASP n 1 325 PHE n 1 326 MET n 1 327 ARG n 1 328 PRO n 1 329 SER n 1 330 LYS n 1 331 GLY n 1 332 LYS n 1 333 ARG n 1 334 ALA n 1 335 GLU n 1 336 GLY n 1 337 ASP n 1 338 TYR n 1 339 MET n 1 340 ASN n 1 341 PRO n 1 342 ARG n 1 343 TRP n 1 344 ASP n 1 345 HIS n 1 346 HIS n 1 347 ASP n 1 348 ASP n 1 349 GLY n 1 350 ARG n 1 351 ARG n 1 352 LEU n 1 353 PRO n 1 354 ASP n 1 355 SER n 1 356 ARG n 1 357 GLU n 1 358 MET n 1 359 ASP n 1 360 GLU n 1 361 GLN n 1 362 VAL n 1 363 HIS n 1 364 GLU n 1 365 LYS n 1 366 ASP n 1 367 GLN n 1 368 GLU n 1 369 ILE n 1 370 SER n 1 371 SER n 1 372 THR n 1 373 MET n 1 374 LYS n 1 375 GLN n 1 376 ILE n 1 377 ALA n 1 378 ASP n 1 379 LEU n 1 380 ASN n 1 381 LYS n 1 382 GLN n 1 383 LEU n 1 384 SER n 1 385 ALA n 1 386 MET n 1 387 GLN n 1 388 GLU n 1 389 SER n 1 390 GLU n 1 391 ALA n 1 392 VAL n 1 393 GLU n 1 394 ASN n 1 395 LEU n 1 396 TYR n 1 397 PHE n 1 398 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 398 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene CCR4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Guillardia theta' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 55529 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PC1 non-polymer . 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE 3-SN-PHOSPHATIDYLCHOLINE 'C44 H88 N O8 P' 790.145 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -24 ? ? ? A . n A 1 2 LYS 2 -23 ? ? ? A . n A 1 3 THR 3 -22 ? ? ? A . n A 1 4 ILE 4 -21 ? ? ? A . n A 1 5 ILE 5 -20 ? ? ? A . n A 1 6 ALA 6 -19 ? ? ? A . n A 1 7 LEU 7 -18 ? ? ? A . n A 1 8 SER 8 -17 ? ? ? A . n A 1 9 TYR 9 -16 ? ? ? A . n A 1 10 ILE 10 -15 ? ? ? A . n A 1 11 PHE 11 -14 ? ? ? A . n A 1 12 CYS 12 -13 ? ? ? A . n A 1 13 LEU 13 -12 ? ? ? A . n A 1 14 VAL 14 -11 ? ? ? A . n A 1 15 PHE 15 -10 ? ? ? A . n A 1 16 ALA 16 -9 ? ? ? A . n A 1 17 ASP 17 -8 ? ? ? A . n A 1 18 TYR 18 -7 ? ? ? A . n A 1 19 LYS 19 -6 ? ? ? A . n A 1 20 ASP 20 -5 ? ? ? A . n A 1 21 ASP 21 -4 ? ? ? A . n A 1 22 ASP 22 -3 ? ? ? A . n A 1 23 ASP 23 -2 ? ? ? A . n A 1 24 ALA 24 -1 ? ? ? A . n A 1 25 MET 25 0 ? ? ? A . n A 1 26 GLY 26 1 ? ? ? A . n A 1 27 THR 27 2 ? ? ? A . n A 1 28 THR 28 3 ? ? ? A . n A 1 29 SER 29 4 ? ? ? A . n A 1 30 ALA 30 5 5 ALA ALA A . n A 1 31 PRO 31 6 6 PRO PRO A . n A 1 32 SER 32 7 7 SER SER A . n A 1 33 LEU 33 8 8 LEU LEU A . n A 1 34 SER 34 9 9 SER SER A . n A 1 35 ASP 35 10 10 ASP ASP A . n A 1 36 PRO 36 11 11 PRO PRO A . n A 1 37 ASN 37 12 12 ASN ASN A . n A 1 38 TRP 38 13 13 TRP TRP A . n A 1 39 GLN 39 14 14 GLN GLN A . n A 1 40 TYR 40 15 15 TYR TYR A . n A 1 41 GLY 41 16 16 GLY GLY A . n A 1 42 MET 42 17 17 MET MET A . n A 1 43 GLY 43 18 18 GLY GLY A . n A 1 44 GLY 44 19 19 GLY GLY A . n A 1 45 TRP 45 20 20 TRP TRP A . n A 1 46 ASN 46 21 21 ASN ASN A . n A 1 47 ASN 47 22 22 ASN ASN A . n A 1 48 PRO 48 23 23 PRO PRO A . n A 1 49 ARG 49 24 24 ARG ARG A . n A 1 50 LEU 50 25 25 LEU LEU A . n A 1 51 PRO 51 26 26 PRO PRO A . n A 1 52 ASN 52 27 27 ASN ASN A . n A 1 53 PHE 53 28 28 PHE PHE A . n A 1 54 ASN 54 29 29 ASN ASN A . n A 1 55 LEU 55 30 30 LEU LEU A . n A 1 56 HIS 56 31 31 HIS HIS A . n A 1 57 ASP 57 32 32 ASP ASP A . n A 1 58 PRO 58 33 33 PRO PRO A . n A 1 59 THR 59 34 34 THR THR A . n A 1 60 VAL 60 35 35 VAL VAL A . n A 1 61 ILE 61 36 36 ILE ILE A . n A 1 62 GLY 62 37 37 GLY GLY A . n A 1 63 VAL 63 38 38 VAL VAL A . n A 1 64 ASP 64 39 39 ASP ASP A . n A 1 65 TRP 65 40 40 TRP TRP A . n A 1 66 LEU 66 41 41 LEU LEU A . n A 1 67 GLY 67 42 42 GLY GLY A . n A 1 68 PHE 68 43 43 PHE PHE A . n A 1 69 LEU 69 44 44 LEU LEU A . n A 1 70 CYS 70 45 45 CYS CYS A . n A 1 71 LEU 71 46 46 LEU LEU A . n A 1 72 LEU 72 47 47 LEU LEU A . n A 1 73 GLY 73 48 48 GLY GLY A . n A 1 74 ALA 74 49 49 ALA ALA A . n A 1 75 SER 75 50 50 SER SER A . n A 1 76 LEU 76 51 51 LEU LEU A . n A 1 77 ALA 77 52 52 ALA ALA A . n A 1 78 LEU 78 53 53 LEU LEU A . n A 1 79 MET 79 54 54 MET MET A . n A 1 80 TYR 80 55 55 TYR TYR A . n A 1 81 LYS 81 56 56 LYS LYS A . n A 1 82 LEU 82 57 57 LEU LEU A . n A 1 83 MET 83 58 58 MET MET A . n A 1 84 SER 84 59 59 SER SER A . n A 1 85 PHE 85 60 60 PHE PHE A . n A 1 86 LYS 86 61 61 LYS LYS A . n A 1 87 GLY 87 62 62 GLY GLY A . n A 1 88 PRO 88 63 63 PRO PRO A . n A 1 89 ASP 89 64 64 ASP ASP A . n A 1 90 GLY 90 65 65 GLY GLY A . n A 1 91 ASP 91 66 66 ASP ASP A . n A 1 92 GLN 92 67 67 GLN GLN A . n A 1 93 GLU 93 68 68 GLU GLU A . n A 1 94 PHE 94 69 69 PHE PHE A . n A 1 95 PHE 95 70 70 PHE PHE A . n A 1 96 VAL 96 71 71 VAL VAL A . n A 1 97 GLY 97 72 72 GLY GLY A . n A 1 98 TYR 98 73 73 TYR TYR A . n A 1 99 ARG 99 74 74 ARG ARG A . n A 1 100 GLU 100 75 75 GLU GLU A . n A 1 101 GLU 101 76 76 GLU GLU A . n A 1 102 LYS 102 77 77 LYS LYS A . n A 1 103 CYS 103 78 78 CYS CYS A . n A 1 104 LEU 104 79 79 LEU LEU A . n A 1 105 SER 105 80 80 SER SER A . n A 1 106 ILE 106 81 81 ILE ILE A . n A 1 107 TYR 107 82 82 TYR TYR A . n A 1 108 VAL 108 83 83 VAL VAL A . n A 1 109 ASN 109 84 84 ASN ASN A . n A 1 110 LEU 110 85 85 LEU LEU A . n A 1 111 ILE 111 86 86 ILE ILE A . n A 1 112 ALA 112 87 87 ALA ALA A . n A 1 113 ALA 113 88 88 ALA ALA A . n A 1 114 ILE 114 89 89 ILE ILE A . n A 1 115 THR 115 90 90 THR THR A . n A 1 116 TYR 116 91 91 TYR TYR A . n A 1 117 TRP 117 92 92 TRP TRP A . n A 1 118 GLY 118 93 93 GLY GLY A . n A 1 119 ARG 119 94 94 ARG ARG A . n A 1 120 ILE 120 95 95 ILE ILE A . n A 1 121 CYS 121 96 96 CYS CYS A . n A 1 122 ALA 122 97 97 ALA ALA A . n A 1 123 HIS 123 98 98 HIS HIS A . n A 1 124 PHE 124 99 99 PHE PHE A . n A 1 125 ASN 125 100 100 ASN ASN A . n A 1 126 ASN 126 101 101 ASN ASN A . n A 1 127 ASP 127 102 102 ASP ASP A . n A 1 128 MET 128 103 103 MET MET A . n A 1 129 GLY 129 104 104 GLY GLY A . n A 1 130 LEU 130 105 105 LEU LEU A . n A 1 131 SER 131 106 106 SER SER A . n A 1 132 LEU 132 107 107 LEU LEU A . n A 1 133 SER 133 108 108 SER SER A . n A 1 134 VAL 134 109 109 VAL VAL A . n A 1 135 ASN 135 110 110 ASN ASN A . n A 1 136 TYR 136 111 111 TYR TYR A . n A 1 137 PHE 137 112 112 PHE PHE A . n A 1 138 LYS 138 113 113 LYS LYS A . n A 1 139 TYR 139 114 114 TYR TYR A . n A 1 140 LEU 140 115 115 LEU LEU A . n A 1 141 ASP 141 116 116 ASP ASP A . n A 1 142 TYR 142 117 117 TYR TYR A . n A 1 143 ILE 143 118 118 ILE ILE A . n A 1 144 PHE 144 119 119 PHE PHE A . n A 1 145 THR 145 120 120 THR THR A . n A 1 146 CYS 146 121 121 CYS CYS A . n A 1 147 PRO 147 122 122 PRO PRO A . n A 1 148 ILE 148 123 123 ILE ILE A . n A 1 149 LEU 149 124 124 LEU LEU A . n A 1 150 THR 150 125 125 THR THR A . n A 1 151 LEU 151 126 126 LEU LEU A . n A 1 152 ASP 152 127 127 ASP ASP A . n A 1 153 LEU 153 128 128 LEU LEU A . n A 1 154 LEU 154 129 129 LEU LEU A . n A 1 155 TRP 155 130 130 TRP TRP A . n A 1 156 SER 156 131 131 SER SER A . n A 1 157 LEU 157 132 132 LEU LEU A . n A 1 158 ASN 158 133 133 ASN ASN A . n A 1 159 LEU 159 134 134 LEU LEU A . n A 1 160 PRO 160 135 135 PRO PRO A . n A 1 161 TYR 161 136 136 TYR TYR A . n A 1 162 LYS 162 137 137 LYS LYS A . n A 1 163 ILE 163 138 138 ILE ILE A . n A 1 164 THR 164 139 139 THR THR A . n A 1 165 TYR 165 140 140 TYR TYR A . n A 1 166 SER 166 141 141 SER SER A . n A 1 167 LEU 167 142 142 LEU LEU A . n A 1 168 PHE 168 143 143 PHE PHE A . n A 1 169 VAL 169 144 144 VAL VAL A . n A 1 170 GLY 170 145 145 GLY GLY A . n A 1 171 LEU 171 146 146 LEU LEU A . n A 1 172 THR 172 147 147 THR THR A . n A 1 173 ILE 173 148 148 ILE ILE A . n A 1 174 ALA 174 149 149 ALA ALA A . n A 1 175 CYS 175 150 150 CYS CYS A . n A 1 176 GLY 176 151 151 GLY GLY A . n A 1 177 VAL 177 152 152 VAL VAL A . n A 1 178 PHE 178 153 153 PHE PHE A . n A 1 179 CYS 179 154 154 CYS CYS A . n A 1 180 ASN 180 155 155 ASN ASN A . n A 1 181 ALA 181 156 156 ALA ALA A . n A 1 182 PHE 182 157 157 PHE PHE A . n A 1 183 GLU 183 158 158 GLU GLU A . n A 1 184 PRO 184 159 159 PRO PRO A . n A 1 185 PRO 185 160 160 PRO PRO A . n A 1 186 ALA 186 161 161 ALA ALA A . n A 1 187 ARG 187 162 162 ARG ARG A . n A 1 188 TYR 188 163 163 TYR TYR A . n A 1 189 LEU 189 164 164 LEU LEU A . n A 1 190 TRP 190 165 165 TRP TRP A . n A 1 191 PHE 191 166 166 PHE PHE A . n A 1 192 MET 192 167 167 MET MET A . n A 1 193 PHE 193 168 168 PHE PHE A . n A 1 194 GLY 194 169 169 GLY GLY A . n A 1 195 CYS 195 170 170 CYS CYS A . n A 1 196 PHE 196 171 171 PHE PHE A . n A 1 197 ILE 197 172 172 ILE ILE A . n A 1 198 PHE 198 173 173 PHE PHE A . n A 1 199 ALA 199 174 174 ALA ALA A . n A 1 200 PHE 200 175 175 PHE PHE A . n A 1 201 THR 201 176 176 THR THR A . n A 1 202 TRP 202 177 177 TRP TRP A . n A 1 203 ILE 203 178 178 ILE ILE A . n A 1 204 SER 204 179 179 SER SER A . n A 1 205 ILE 205 180 180 ILE ILE A . n A 1 206 ILE 206 181 181 ILE ILE A . n A 1 207 ARG 207 182 182 ARG ARG A . n A 1 208 LEU 208 183 183 LEU LEU A . n A 1 209 VAL 209 184 184 VAL VAL A . n A 1 210 TYR 210 185 185 TYR TYR A . n A 1 211 ALA 211 186 186 ALA ALA A . n A 1 212 ARG 212 187 187 ARG ARG A . n A 1 213 PHE 213 188 188 PHE PHE A . n A 1 214 GLN 214 189 189 GLN GLN A . n A 1 215 GLN 215 190 190 GLN GLN A . n A 1 216 PHE 216 191 191 PHE PHE A . n A 1 217 LEU 217 192 192 LEU LEU A . n A 1 218 ASN 218 193 193 ASN ASN A . n A 1 219 GLU 219 194 ? ? ? A . n A 1 220 ASP 220 195 ? ? ? A . n A 1 221 ALA 221 196 ? ? ? A . n A 1 222 LYS 222 197 ? ? ? A . n A 1 223 LYS 223 198 198 LYS LYS A . n A 1 224 ILE 224 199 199 ILE ILE A . n A 1 225 ARG 225 200 200 ARG ARG A . n A 1 226 ALA 226 201 201 ALA ALA A . n A 1 227 PRO 227 202 202 PRO PRO A . n A 1 228 LEU 228 203 203 LEU LEU A . n A 1 229 LYS 229 204 204 LYS LYS A . n A 1 230 LEU 230 205 205 LEU LEU A . n A 1 231 SER 231 206 206 SER SER A . n A 1 232 LEU 232 207 207 LEU LEU A . n A 1 233 THR 233 208 208 THR THR A . n A 1 234 LEU 234 209 209 LEU LEU A . n A 1 235 TYR 235 210 210 TYR TYR A . n A 1 236 PHE 236 211 211 PHE PHE A . n A 1 237 SER 237 212 212 SER SER A . n A 1 238 ILE 238 213 213 ILE ILE A . n A 1 239 TRP 239 214 214 TRP TRP A . n A 1 240 CYS 240 215 215 CYS CYS A . n A 1 241 GLY 241 216 216 GLY GLY A . n A 1 242 TYR 242 217 217 TYR TYR A . n A 1 243 PRO 243 218 218 PRO PRO A . n A 1 244 ALA 244 219 219 ALA ALA A . n A 1 245 LEU 245 220 220 LEU LEU A . n A 1 246 TRP 246 221 221 TRP TRP A . n A 1 247 LEU 247 222 222 LEU LEU A . n A 1 248 LEU 248 223 223 LEU LEU A . n A 1 249 THR 249 224 224 THR THR A . n A 1 250 GLU 250 225 225 GLU GLU A . n A 1 251 PHE 251 226 226 PHE PHE A . n A 1 252 GLY 252 227 227 GLY GLY A . n A 1 253 ALA 253 228 228 ALA ALA A . n A 1 254 ILE 254 229 229 ILE ILE A . n A 1 255 SER 255 230 230 SER SER A . n A 1 256 GLN 256 231 231 GLN GLN A . n A 1 257 LEU 257 232 232 LEU LEU A . n A 1 258 ALA 258 233 233 ALA ALA A . n A 1 259 ALA 259 234 234 ALA ALA A . n A 1 260 HIS 260 235 235 HIS HIS A . n A 1 261 VAL 261 236 236 VAL VAL A . n A 1 262 THR 262 237 237 THR THR A . n A 1 263 THR 263 238 238 THR THR A . n A 1 264 VAL 264 239 239 VAL VAL A . n A 1 265 ILE 265 240 240 ILE ILE A . n A 1 266 MET 266 241 241 MET MET A . n A 1 267 ASP 267 242 242 ASP ASP A . n A 1 268 VAL 268 243 243 VAL VAL A . n A 1 269 ALA 269 244 244 ALA ALA A . n A 1 270 ALA 270 245 245 ALA ALA A . n A 1 271 LYS 271 246 246 LYS LYS A . n A 1 272 SER 272 247 247 SER SER A . n A 1 273 VAL 273 248 248 VAL VAL A . n A 1 274 TYR 274 249 249 TYR TYR A . n A 1 275 GLY 275 250 250 GLY GLY A . n A 1 276 PHE 276 251 251 PHE PHE A . n A 1 277 ALA 277 252 252 ALA ALA A . n A 1 278 LEU 278 253 253 LEU LEU A . n A 1 279 LEU 279 254 254 LEU LEU A . n A 1 280 LYS 280 255 255 LYS LYS A . n A 1 281 PHE 281 256 256 PHE PHE A . n A 1 282 GLN 282 257 257 GLN GLN A . n A 1 283 LEU 283 258 258 LEU LEU A . n A 1 284 GLY 284 259 259 GLY GLY A . n A 1 285 VAL 285 260 260 VAL VAL A . n A 1 286 ASP 286 261 261 ASP ASP A . n A 1 287 LYS 287 262 262 LYS LYS A . n A 1 288 ARG 288 263 263 ARG ARG A . n A 1 289 ASP 289 264 264 ASP ASP A . n A 1 290 VAL 290 265 265 VAL VAL A . n A 1 291 TRP 291 266 266 TRP TRP A . n A 1 292 LEU 292 267 267 LEU LEU A . n A 1 293 ASP 293 268 268 ASP ASP A . n A 1 294 GLU 294 269 269 GLU GLU A . n A 1 295 LEU 295 270 270 LEU LEU A . n A 1 296 LYS 296 271 271 LYS LYS A . n A 1 297 SER 297 272 272 SER SER A . n A 1 298 VAL 298 273 273 VAL VAL A . n A 1 299 ARG 299 274 ? ? ? A . n A 1 300 TYR 300 275 ? ? ? A . n A 1 301 ARG 301 276 ? ? ? A . n A 1 302 ASP 302 277 ? ? ? A . n A 1 303 VAL 303 278 ? ? ? A . n A 1 304 VAL 304 279 ? ? ? A . n A 1 305 PRO 305 280 ? ? ? A . n A 1 306 GLN 306 281 ? ? ? A . n A 1 307 ILE 307 282 ? ? ? A . n A 1 308 ARG 308 283 ? ? ? A . n A 1 309 PRO 309 284 ? ? ? A . n A 1 310 SER 310 285 ? ? ? A . n A 1 311 LYS 311 286 ? ? ? A . n A 1 312 THR 312 287 ? ? ? A . n A 1 313 ARG 313 288 ? ? ? A . n A 1 314 GLU 314 289 ? ? ? A . n A 1 315 GLY 315 290 ? ? ? A . n A 1 316 ARG 316 291 ? ? ? A . n A 1 317 MET 317 292 ? ? ? A . n A 1 318 GLU 318 293 ? ? ? A . n A 1 319 TYR 319 294 ? ? ? A . n A 1 320 SER 320 295 ? ? ? A . n A 1 321 GLU 321 296 ? ? ? A . n A 1 322 ASP 322 297 ? ? ? A . n A 1 323 GLY 323 298 ? ? ? A . n A 1 324 ASP 324 299 ? ? ? A . n A 1 325 PHE 325 300 ? ? ? A . n A 1 326 MET 326 301 ? ? ? A . n A 1 327 ARG 327 302 ? ? ? A . n A 1 328 PRO 328 303 ? ? ? A . n A 1 329 SER 329 304 ? ? ? A . n A 1 330 LYS 330 305 ? ? ? A . n A 1 331 GLY 331 306 ? ? ? A . n A 1 332 LYS 332 307 ? ? ? A . n A 1 333 ARG 333 308 ? ? ? A . n A 1 334 ALA 334 309 ? ? ? A . n A 1 335 GLU 335 310 ? ? ? A . n A 1 336 GLY 336 311 ? ? ? A . n A 1 337 ASP 337 312 ? ? ? A . n A 1 338 TYR 338 313 ? ? ? A . n A 1 339 MET 339 314 ? ? ? A . n A 1 340 ASN 340 315 ? ? ? A . n A 1 341 PRO 341 316 ? ? ? A . n A 1 342 ARG 342 317 ? ? ? A . n A 1 343 TRP 343 318 ? ? ? A . n A 1 344 ASP 344 319 ? ? ? A . n A 1 345 HIS 345 320 ? ? ? A . n A 1 346 HIS 346 321 ? ? ? A . n A 1 347 ASP 347 322 ? ? ? A . n A 1 348 ASP 348 323 ? ? ? A . n A 1 349 GLY 349 324 ? ? ? A . n A 1 350 ARG 350 325 ? ? ? A . n A 1 351 ARG 351 326 ? ? ? A . n A 1 352 LEU 352 327 ? ? ? A . n A 1 353 PRO 353 328 ? ? ? A . n A 1 354 ASP 354 329 ? ? ? A . n A 1 355 SER 355 330 ? ? ? A . n A 1 356 ARG 356 331 ? ? ? A . n A 1 357 GLU 357 332 ? ? ? A . n A 1 358 MET 358 333 ? ? ? A . n A 1 359 ASP 359 334 ? ? ? A . n A 1 360 GLU 360 335 ? ? ? A . n A 1 361 GLN 361 336 ? ? ? A . n A 1 362 VAL 362 337 ? ? ? A . n A 1 363 HIS 363 338 ? ? ? A . n A 1 364 GLU 364 339 ? ? ? A . n A 1 365 LYS 365 340 ? ? ? A . n A 1 366 ASP 366 341 ? ? ? A . n A 1 367 GLN 367 342 ? ? ? A . n A 1 368 GLU 368 343 ? ? ? A . n A 1 369 ILE 369 344 ? ? ? A . n A 1 370 SER 370 345 ? ? ? A . n A 1 371 SER 371 346 ? ? ? A . n A 1 372 THR 372 347 ? ? ? A . n A 1 373 MET 373 348 ? ? ? A . n A 1 374 LYS 374 349 ? ? ? A . n A 1 375 GLN 375 350 ? ? ? A . n A 1 376 ILE 376 351 ? ? ? A . n A 1 377 ALA 377 352 ? ? ? A . n A 1 378 ASP 378 353 ? ? ? A . n A 1 379 LEU 379 354 ? ? ? A . n A 1 380 ASN 380 355 ? ? ? A . n A 1 381 LYS 381 356 ? ? ? A . n A 1 382 GLN 382 357 ? ? ? A . n A 1 383 LEU 383 358 ? ? ? A . n A 1 384 SER 384 359 ? ? ? A . n A 1 385 ALA 385 360 ? ? ? A . n A 1 386 MET 386 361 ? ? ? A . n A 1 387 GLN 387 362 ? ? ? A . n A 1 388 GLU 388 363 ? ? ? A . n A 1 389 SER 389 364 ? ? ? A . n A 1 390 GLU 390 365 ? ? ? A . n A 1 391 ALA 391 366 ? ? ? A . n A 1 392 VAL 392 367 ? ? ? A . n A 1 393 GLU 393 368 ? ? ? A . n A 1 394 ASN 394 369 ? ? ? A . n A 1 395 LEU 395 370 ? ? ? A . n A 1 396 TYR 396 371 ? ? ? A . n A 1 397 PHE 397 372 ? ? ? A . n A 1 398 GLN 398 373 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id RET _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id RET _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET 1 401 301 RET RET A . C 3 PC1 1 402 401 PC1 PC1 A . D 3 PC1 1 403 402 PC1 PC1 A . E 3 PC1 1 404 403 PC1 PC1 A . F 4 HOH 1 501 3 HOH HOH A . F 4 HOH 2 502 10 HOH HOH A . F 4 HOH 3 503 6 HOH HOH A . F 4 HOH 4 504 1 HOH HOH A . F 4 HOH 5 505 7 HOH HOH A . F 4 HOH 6 506 9 HOH HOH A . F 4 HOH 7 507 5 HOH HOH A . F 4 HOH 8 508 8 HOH HOH A . F 4 HOH 9 509 4 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A PC1 402 ? C11 ? C PC1 1 C11 2 1 N 1 A PC1 402 ? C12 ? C PC1 1 C12 3 1 N 1 A PC1 402 ? N ? C PC1 1 N 4 1 N 1 A PC1 402 ? C13 ? C PC1 1 C13 5 1 N 1 A PC1 402 ? C14 ? C PC1 1 C14 6 1 N 1 A PC1 402 ? C15 ? C PC1 1 C15 7 1 N 1 A PC1 402 ? C2G ? C PC1 1 C2G 8 1 N 1 A PC1 402 ? C2H ? C PC1 1 C2H 9 1 N 1 A PC1 402 ? C2I ? C PC1 1 C2I 10 1 N 1 A PC1 402 ? C3B ? C PC1 1 C3B 11 1 N 1 A PC1 402 ? C3C ? C PC1 1 C3C 12 1 N 1 A PC1 402 ? C3D ? C PC1 1 C3D 13 1 N 1 A PC1 402 ? C3E ? C PC1 1 C3E 14 1 N 1 A PC1 402 ? C3F ? C PC1 1 C3F 15 1 N 1 A PC1 402 ? C3G ? C PC1 1 C3G 16 1 N 1 A PC1 402 ? C3H ? C PC1 1 C3H 17 1 N 1 A PC1 402 ? C3I ? C PC1 1 C3I 18 1 N 1 A PC1 403 ? C11 ? D PC1 1 C11 19 1 N 1 A PC1 403 ? C12 ? D PC1 1 C12 20 1 N 1 A PC1 403 ? N ? D PC1 1 N 21 1 N 1 A PC1 403 ? C13 ? D PC1 1 C13 22 1 N 1 A PC1 403 ? C14 ? D PC1 1 C14 23 1 N 1 A PC1 403 ? C15 ? D PC1 1 C15 24 1 N 1 A PC1 403 ? C3F ? D PC1 1 C3F 25 1 N 1 A PC1 403 ? C3G ? D PC1 1 C3G 26 1 N 1 A PC1 403 ? C3H ? D PC1 1 C3H 27 1 N 1 A PC1 403 ? C3I ? D PC1 1 C3I 28 1 N 1 A PC1 404 ? O12 ? E PC1 1 O12 29 1 N 1 A PC1 404 ? P ? E PC1 1 P 30 1 N 1 A PC1 404 ? O14 ? E PC1 1 O14 31 1 N 1 A PC1 404 ? O13 ? E PC1 1 O13 32 1 N 1 A PC1 404 ? C11 ? E PC1 1 C11 33 1 N 1 A PC1 404 ? C12 ? E PC1 1 C12 34 1 N 1 A PC1 404 ? N ? E PC1 1 N 35 1 N 1 A PC1 404 ? C13 ? E PC1 1 C13 36 1 N 1 A PC1 404 ? C14 ? E PC1 1 C14 37 1 N 1 A PC1 404 ? C15 ? E PC1 1 C15 38 1 N 1 A PC1 404 ? O11 ? E PC1 1 O11 39 1 N 1 A PC1 404 ? C1 ? E PC1 1 C1 40 1 N 1 A PC1 404 ? C3 ? E PC1 1 C3 41 1 N 1 A PC1 404 ? O31 ? E PC1 1 O31 42 1 N 1 A PC1 404 ? C31 ? E PC1 1 C31 43 1 N 1 A PC1 404 ? O32 ? E PC1 1 O32 44 1 N 1 A PC1 404 ? C32 ? E PC1 1 C32 45 1 N 1 A PC1 404 ? C33 ? E PC1 1 C33 46 1 N 1 A PC1 404 ? C34 ? E PC1 1 C34 47 1 N 1 A PC1 404 ? C35 ? E PC1 1 C35 48 1 N 1 A PC1 404 ? C36 ? E PC1 1 C36 49 1 N 1 A PC1 404 ? C37 ? E PC1 1 C37 50 1 N 1 A PC1 404 ? C38 ? E PC1 1 C38 51 1 N 1 A PC1 404 ? C39 ? E PC1 1 C39 52 1 N 1 A PC1 404 ? C3A ? E PC1 1 C3A 53 1 N 1 A PC1 404 ? C3B ? E PC1 1 C3B 54 1 N 1 A PC1 404 ? C3C ? E PC1 1 C3C 55 1 N 1 A PC1 404 ? C3D ? E PC1 1 C3D 56 1 N 1 A PC1 404 ? C3E ? E PC1 1 C3E 57 1 N 1 A PC1 404 ? C3F ? E PC1 1 C3F 58 1 N 1 A PC1 404 ? C3G ? E PC1 1 C3G 59 1 N 1 A PC1 404 ? C3H ? E PC1 1 C3H 60 1 N 1 A PC1 404 ? C3I ? E PC1 1 C3I # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8YEL _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YEL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YEL _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 76.494 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.830 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8YEL _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.71 _refine.ls_d_res_low 2.71 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 189241 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.45849 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.45849 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'PARAMETERS FOR MASK CACLULATION' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.103 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 2.676 _refine.overall_SU_ML 0.085 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.number_atoms_solvent ? _refine_hist.number_atoms_total 2277 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein ? _refine_hist.pdbx_number_atoms_nucleic_acid ? _refine_hist.pdbx_number_atoms_ligand ? _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 0.013 2336 ? r_bond_refined_d ? ? 'ELECTRON MICROSCOPY' ? 0.030 0.017 2263 ? r_bond_other_d ? ? 'ELECTRON MICROSCOPY' ? 1.133 1.638 3157 ? r_angle_refined_deg ? ? 'ELECTRON MICROSCOPY' ? 1.496 1.562 5202 ? r_angle_other_deg ? ? 'ELECTRON MICROSCOPY' ? 4.287 5.000 263 ? r_dihedral_angle_1_deg ? ? 'ELECTRON MICROSCOPY' ? 34.081 21.091 110 ? r_dihedral_angle_2_deg ? ? 'ELECTRON MICROSCOPY' ? 18.904 15.000 345 ? r_dihedral_angle_3_deg ? ? 'ELECTRON MICROSCOPY' ? 24.024 15.000 8 ? r_dihedral_angle_4_deg ? ? 'ELECTRON MICROSCOPY' ? 0.064 0.200 279 ? r_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.004 0.020 2507 ? r_gen_planes_refined ? ? 'ELECTRON MICROSCOPY' ? 0.002 0.020 572 ? r_gen_planes_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? 1.317 7.863 1058 ? r_mcbond_it ? ? 'ELECTRON MICROSCOPY' ? 1.318 7.861 1057 ? r_mcbond_other ? ? 'ELECTRON MICROSCOPY' ? 2.437 11.779 1319 ? r_mcangle_it ? ? 'ELECTRON MICROSCOPY' ? 2.436 11.781 1320 ? r_mcangle_other ? ? 'ELECTRON MICROSCOPY' ? 0.889 8.409 1278 ? r_scbond_it ? ? 'ELECTRON MICROSCOPY' ? 0.889 8.411 1279 ? r_scbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_scangle_it ? ? 'ELECTRON MICROSCOPY' ? 1.700 12.415 1839 ? r_scangle_other ? ? 'ELECTRON MICROSCOPY' ? 9.148 ? 9356 ? r_long_range_B_refined ? ? 'ELECTRON MICROSCOPY' ? 9.147 ? 9353 ? r_long_range_B_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_rigid_bond_restr ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_free ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_ls_shell.d_res_high 2.000 _refine_ls_shell.d_res_low 2.052 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 0 _refine_ls_shell.number_reflns_R_work 14019 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.708 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.000 # loop_ _struct_ncs_oper.id _struct_ncs_oper.code _struct_ncs_oper.details _struct_ncs_oper.matrix[1][1] _struct_ncs_oper.matrix[1][2] _struct_ncs_oper.matrix[1][3] _struct_ncs_oper.matrix[2][1] _struct_ncs_oper.matrix[2][2] _struct_ncs_oper.matrix[2][3] _struct_ncs_oper.matrix[3][1] _struct_ncs_oper.matrix[3][2] _struct_ncs_oper.matrix[3][3] _struct_ncs_oper.vector[1] _struct_ncs_oper.vector[2] _struct_ncs_oper.vector[3] 1 given ? 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 2 generate ? -0.500000 -0.866025 0.000000 0.866025 -0.500000 0.000000 0.000000 0.000000 1.000000 314.20816 84.19182 0.00000 3 generate ? -0.500000 0.866025 0.000000 -0.866025 -0.500000 0.000000 0.000000 0.000000 1.000000 84.19182 314.20816 0.00000 # _struct.entry_id 8YEL _struct.title 'Cryo-EM structure of the channelrhodopsin GtCCR4' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YEL _struct_keywords.text 'Microbial rhodopsin, MEMBRANE PROTEIN' _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A3G1I4H9_GUITH _struct_ref.pdbx_db_accession A0A3G1I4H9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TTSAPSLSDPNWQYGMGGWNNPRLPNFNLHDPTVIGVDWLGFLCLLGASLALMYKLMSFKGPDGDQEFFVGYREEKCLSI YVNLIAAITYWGRICAHFNNDMGLSLSVNYFKYLDYIFTCPILTLDLLWSLNLPYKITYSLFVGLTIACGVFCNAFEPPA RYLWFMFGCFIFAFTWISIIRLVYARFQQFLNEDAKKIRAPLKLSLTLYFSIWCGYPALWLLTEFGAISQLAAHVTTVIM DVAAKSVYGFALLKFQLGVDKRDVWLDELKSVRYRDVVPQIRPSKTREGRMEYSEDGDFMRPSKGKRAEGDYMNPRWDHH DDGRRLPDSREMDEQVHEKDQEISSTMKQIADLNKQLSAMQESEAV ; _struct_ref.pdbx_align_begin 2 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8YEL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 27 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 392 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A3G1I4H9 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 367 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 367 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8YEL MET A 1 ? UNP A0A3G1I4H9 ? ? 'initiating methionine' -24 1 1 8YEL LYS A 2 ? UNP A0A3G1I4H9 ? ? 'expression tag' -23 2 1 8YEL THR A 3 ? UNP A0A3G1I4H9 ? ? 'expression tag' -22 3 1 8YEL ILE A 4 ? UNP A0A3G1I4H9 ? ? 'expression tag' -21 4 1 8YEL ILE A 5 ? UNP A0A3G1I4H9 ? ? 'expression tag' -20 5 1 8YEL ALA A 6 ? UNP A0A3G1I4H9 ? ? 'expression tag' -19 6 1 8YEL LEU A 7 ? UNP A0A3G1I4H9 ? ? 'expression tag' -18 7 1 8YEL SER A 8 ? UNP A0A3G1I4H9 ? ? 'expression tag' -17 8 1 8YEL TYR A 9 ? UNP A0A3G1I4H9 ? ? 'expression tag' -16 9 1 8YEL ILE A 10 ? UNP A0A3G1I4H9 ? ? 'expression tag' -15 10 1 8YEL PHE A 11 ? UNP A0A3G1I4H9 ? ? 'expression tag' -14 11 1 8YEL CYS A 12 ? UNP A0A3G1I4H9 ? ? 'expression tag' -13 12 1 8YEL LEU A 13 ? UNP A0A3G1I4H9 ? ? 'expression tag' -12 13 1 8YEL VAL A 14 ? UNP A0A3G1I4H9 ? ? 'expression tag' -11 14 1 8YEL PHE A 15 ? UNP A0A3G1I4H9 ? ? 'expression tag' -10 15 1 8YEL ALA A 16 ? UNP A0A3G1I4H9 ? ? 'expression tag' -9 16 1 8YEL ASP A 17 ? UNP A0A3G1I4H9 ? ? 'expression tag' -8 17 1 8YEL TYR A 18 ? UNP A0A3G1I4H9 ? ? 'expression tag' -7 18 1 8YEL LYS A 19 ? UNP A0A3G1I4H9 ? ? 'expression tag' -6 19 1 8YEL ASP A 20 ? UNP A0A3G1I4H9 ? ? 'expression tag' -5 20 1 8YEL ASP A 21 ? UNP A0A3G1I4H9 ? ? 'expression tag' -4 21 1 8YEL ASP A 22 ? UNP A0A3G1I4H9 ? ? 'expression tag' -3 22 1 8YEL ASP A 23 ? UNP A0A3G1I4H9 ? ? 'expression tag' -2 23 1 8YEL ALA A 24 ? UNP A0A3G1I4H9 ? ? 'expression tag' -1 24 1 8YEL MET A 25 ? UNP A0A3G1I4H9 ? ? 'expression tag' 0 25 1 8YEL GLY A 26 ? UNP A0A3G1I4H9 ? ? 'expression tag' 1 26 1 8YEL GLU A 393 ? UNP A0A3G1I4H9 ? ? 'expression tag' 368 27 1 8YEL ASN A 394 ? UNP A0A3G1I4H9 ? ? 'expression tag' 369 28 1 8YEL LEU A 395 ? UNP A0A3G1I4H9 ? ? 'expression tag' 370 29 1 8YEL TYR A 396 ? UNP A0A3G1I4H9 ? ? 'expression tag' 371 30 1 8YEL PHE A 397 ? UNP A0A3G1I4H9 ? ? 'expression tag' 372 31 1 8YEL GLN A 398 ? UNP A0A3G1I4H9 ? ? 'expression tag' 373 32 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F 1 2 A,B,C,D,E,F 1 3 A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0 0.0 0.0 0.0 0.0 1.0 0.0 0.0 0.0 0.0 1.0 0.0 2 'point symmetry operation' ? ? -0.500000 -0.866025 0.000000 314.20816 0.866025 -0.500000 0.000000 84.19182 0.000000 0.000000 1.000000 0.00000 3 'point symmetry operation' ? ? -0.500000 0.866025 0.000000 84.19182 -0.866025 -0.500000 0.000000 314.20816 0.000000 0.000000 1.000000 0.00000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 57 ? SER A 84 ? ASP A 32 SER A 59 1 ? 28 HELX_P HELX_P2 AA2 ARG A 99 ? LYS A 102 ? ARG A 74 LYS A 77 5 ? 4 HELX_P HELX_P3 AA3 CYS A 103 ? ASN A 125 ? CYS A 78 ASN A 100 1 ? 23 HELX_P HELX_P4 AA4 MET A 128 ? TYR A 136 ? MET A 103 TYR A 111 5 ? 9 HELX_P HELX_P5 AA5 LEU A 140 ? PHE A 144 ? LEU A 115 PHE A 119 5 ? 5 HELX_P HELX_P6 AA6 THR A 145 ? LEU A 157 ? THR A 120 LEU A 132 1 ? 13 HELX_P HELX_P7 AA7 ILE A 163 ? PHE A 182 ? ILE A 138 PHE A 157 1 ? 20 HELX_P HELX_P8 AA8 GLU A 183 ? LEU A 217 ? GLU A 158 LEU A 192 1 ? 35 HELX_P HELX_P9 AA9 ILE A 224 ? PHE A 251 ? ILE A 199 PHE A 226 1 ? 28 HELX_P HELX_P10 AB1 SER A 255 ? LYS A 280 ? SER A 230 LYS A 255 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 271 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 246 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 401 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.344 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 40 ? GLY A 41 ? TYR A 15 GLY A 16 AA1 2 GLY A 44 ? TRP A 45 ? GLY A 19 TRP A 20 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id GLY _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 41 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id GLY _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 16 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id GLY _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 44 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id GLY _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 19 # _pdbx_entry_details.entry_id 8YEL _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 TYR _pdbx_validate_close_contact.auth_seq_id_1 55 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 59 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.07 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 114 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 71.80 _pdbx_validate_torsion.psi -2.43 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8YEL _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'RIGID BODY FIT' # _em_3d_fitting_list.id 1 _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.pdb_entry_id . _em_3d_fitting_list.pdb_chain_id . _em_3d_fitting_list.pdb_chain_residue_range . _em_3d_fitting_list.details ? _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.source_name AlphaFold _em_3d_fitting_list.type 'in silico model' _em_3d_fitting_list.accession_code ? _em_3d_fitting_list.initial_refinement_model_id ? # _em_3d_reconstruction.entry_id 8YEL _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details 'With C3 symmetry' _em_3d_reconstruction.resolution 2.71 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 581115 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name GtCCR4 _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8YEL _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 8YEL _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 277 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8YEL _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -24 ? A MET 1 2 1 Y 1 A LYS -23 ? A LYS 2 3 1 Y 1 A THR -22 ? A THR 3 4 1 Y 1 A ILE -21 ? A ILE 4 5 1 Y 1 A ILE -20 ? A ILE 5 6 1 Y 1 A ALA -19 ? A ALA 6 7 1 Y 1 A LEU -18 ? A LEU 7 8 1 Y 1 A SER -17 ? A SER 8 9 1 Y 1 A TYR -16 ? A TYR 9 10 1 Y 1 A ILE -15 ? A ILE 10 11 1 Y 1 A PHE -14 ? A PHE 11 12 1 Y 1 A CYS -13 ? A CYS 12 13 1 Y 1 A LEU -12 ? A LEU 13 14 1 Y 1 A VAL -11 ? A VAL 14 15 1 Y 1 A PHE -10 ? A PHE 15 16 1 Y 1 A ALA -9 ? A ALA 16 17 1 Y 1 A ASP -8 ? A ASP 17 18 1 Y 1 A TYR -7 ? A TYR 18 19 1 Y 1 A LYS -6 ? A LYS 19 20 1 Y 1 A ASP -5 ? A ASP 20 21 1 Y 1 A ASP -4 ? A ASP 21 22 1 Y 1 A ASP -3 ? A ASP 22 23 1 Y 1 A ASP -2 ? A ASP 23 24 1 Y 1 A ALA -1 ? A ALA 24 25 1 Y 1 A MET 0 ? A MET 25 26 1 Y 1 A GLY 1 ? A GLY 26 27 1 Y 1 A THR 2 ? A THR 27 28 1 Y 1 A THR 3 ? A THR 28 29 1 Y 1 A SER 4 ? A SER 29 30 1 Y 1 A GLU 194 ? A GLU 219 31 1 Y 1 A ASP 195 ? A ASP 220 32 1 Y 1 A ALA 196 ? A ALA 221 33 1 Y 1 A LYS 197 ? A LYS 222 34 1 Y 1 A ARG 274 ? A ARG 299 35 1 Y 1 A TYR 275 ? A TYR 300 36 1 Y 1 A ARG 276 ? A ARG 301 37 1 Y 1 A ASP 277 ? A ASP 302 38 1 Y 1 A VAL 278 ? A VAL 303 39 1 Y 1 A VAL 279 ? A VAL 304 40 1 Y 1 A PRO 280 ? A PRO 305 41 1 Y 1 A GLN 281 ? A GLN 306 42 1 Y 1 A ILE 282 ? A ILE 307 43 1 Y 1 A ARG 283 ? A ARG 308 44 1 Y 1 A PRO 284 ? A PRO 309 45 1 Y 1 A SER 285 ? A SER 310 46 1 Y 1 A LYS 286 ? A LYS 311 47 1 Y 1 A THR 287 ? A THR 312 48 1 Y 1 A ARG 288 ? A ARG 313 49 1 Y 1 A GLU 289 ? A GLU 314 50 1 Y 1 A GLY 290 ? A GLY 315 51 1 Y 1 A ARG 291 ? A ARG 316 52 1 Y 1 A MET 292 ? A MET 317 53 1 Y 1 A GLU 293 ? A GLU 318 54 1 Y 1 A TYR 294 ? A TYR 319 55 1 Y 1 A SER 295 ? A SER 320 56 1 Y 1 A GLU 296 ? A GLU 321 57 1 Y 1 A ASP 297 ? A ASP 322 58 1 Y 1 A GLY 298 ? A GLY 323 59 1 Y 1 A ASP 299 ? A ASP 324 60 1 Y 1 A PHE 300 ? A PHE 325 61 1 Y 1 A MET 301 ? A MET 326 62 1 Y 1 A ARG 302 ? A ARG 327 63 1 Y 1 A PRO 303 ? A PRO 328 64 1 Y 1 A SER 304 ? A SER 329 65 1 Y 1 A LYS 305 ? A LYS 330 66 1 Y 1 A GLY 306 ? A GLY 331 67 1 Y 1 A LYS 307 ? A LYS 332 68 1 Y 1 A ARG 308 ? A ARG 333 69 1 Y 1 A ALA 309 ? A ALA 334 70 1 Y 1 A GLU 310 ? A GLU 335 71 1 Y 1 A GLY 311 ? A GLY 336 72 1 Y 1 A ASP 312 ? A ASP 337 73 1 Y 1 A TYR 313 ? A TYR 338 74 1 Y 1 A MET 314 ? A MET 339 75 1 Y 1 A ASN 315 ? A ASN 340 76 1 Y 1 A PRO 316 ? A PRO 341 77 1 Y 1 A ARG 317 ? A ARG 342 78 1 Y 1 A TRP 318 ? A TRP 343 79 1 Y 1 A ASP 319 ? A ASP 344 80 1 Y 1 A HIS 320 ? A HIS 345 81 1 Y 1 A HIS 321 ? A HIS 346 82 1 Y 1 A ASP 322 ? A ASP 347 83 1 Y 1 A ASP 323 ? A ASP 348 84 1 Y 1 A GLY 324 ? A GLY 349 85 1 Y 1 A ARG 325 ? A ARG 350 86 1 Y 1 A ARG 326 ? A ARG 351 87 1 Y 1 A LEU 327 ? A LEU 352 88 1 Y 1 A PRO 328 ? A PRO 353 89 1 Y 1 A ASP 329 ? A ASP 354 90 1 Y 1 A SER 330 ? A SER 355 91 1 Y 1 A ARG 331 ? A ARG 356 92 1 Y 1 A GLU 332 ? A GLU 357 93 1 Y 1 A MET 333 ? A MET 358 94 1 Y 1 A ASP 334 ? A ASP 359 95 1 Y 1 A GLU 335 ? A GLU 360 96 1 Y 1 A GLN 336 ? A GLN 361 97 1 Y 1 A VAL 337 ? A VAL 362 98 1 Y 1 A HIS 338 ? A HIS 363 99 1 Y 1 A GLU 339 ? A GLU 364 100 1 Y 1 A LYS 340 ? A LYS 365 101 1 Y 1 A ASP 341 ? A ASP 366 102 1 Y 1 A GLN 342 ? A GLN 367 103 1 Y 1 A GLU 343 ? A GLU 368 104 1 Y 1 A ILE 344 ? A ILE 369 105 1 Y 1 A SER 345 ? A SER 370 106 1 Y 1 A SER 346 ? A SER 371 107 1 Y 1 A THR 347 ? A THR 372 108 1 Y 1 A MET 348 ? A MET 373 109 1 Y 1 A LYS 349 ? A LYS 374 110 1 Y 1 A GLN 350 ? A GLN 375 111 1 Y 1 A ILE 351 ? A ILE 376 112 1 Y 1 A ALA 352 ? A ALA 377 113 1 Y 1 A ASP 353 ? A ASP 378 114 1 Y 1 A LEU 354 ? A LEU 379 115 1 Y 1 A ASN 355 ? A ASN 380 116 1 Y 1 A LYS 356 ? A LYS 381 117 1 Y 1 A GLN 357 ? A GLN 382 118 1 Y 1 A LEU 358 ? A LEU 383 119 1 Y 1 A SER 359 ? A SER 384 120 1 Y 1 A ALA 360 ? A ALA 385 121 1 Y 1 A MET 361 ? A MET 386 122 1 Y 1 A GLN 362 ? A GLN 387 123 1 Y 1 A GLU 363 ? A GLU 388 124 1 Y 1 A SER 364 ? A SER 389 125 1 Y 1 A GLU 365 ? A GLU 390 126 1 Y 1 A ALA 366 ? A ALA 391 127 1 Y 1 A VAL 367 ? A VAL 392 128 1 Y 1 A GLU 368 ? A GLU 393 129 1 Y 1 A ASN 369 ? A ASN 394 130 1 Y 1 A LEU 370 ? A LEU 395 131 1 Y 1 A TYR 371 ? A TYR 396 132 1 Y 1 A PHE 372 ? A PHE 397 133 1 Y 1 A GLN 373 ? A GLN 398 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PC1 O12 O N N 250 PC1 P P N N 251 PC1 O14 O N N 252 PC1 O13 O N N 253 PC1 C11 C N N 254 PC1 C12 C N N 255 PC1 N N N N 256 PC1 C13 C N N 257 PC1 C14 C N N 258 PC1 C15 C N N 259 PC1 O11 O N N 260 PC1 C1 C N N 261 PC1 C2 C N R 262 PC1 O21 O N N 263 PC1 C21 C N N 264 PC1 O22 O N N 265 PC1 C22 C N N 266 PC1 C23 C N N 267 PC1 C24 C N N 268 PC1 C25 C N N 269 PC1 C26 C N N 270 PC1 C27 C N N 271 PC1 C28 C N N 272 PC1 C29 C N N 273 PC1 C2A C N N 274 PC1 C2B C N N 275 PC1 C2C C N N 276 PC1 C2D C N N 277 PC1 C2E C N N 278 PC1 C2F C N N 279 PC1 C2G C N N 280 PC1 C2H C N N 281 PC1 C2I C N N 282 PC1 C3 C N N 283 PC1 O31 O N N 284 PC1 C31 C N N 285 PC1 O32 O N N 286 PC1 C32 C N N 287 PC1 C33 C N N 288 PC1 C34 C N N 289 PC1 C35 C N N 290 PC1 C36 C N N 291 PC1 C37 C N N 292 PC1 C38 C N N 293 PC1 C39 C N N 294 PC1 C3A C N N 295 PC1 C3B C N N 296 PC1 C3C C N N 297 PC1 C3D C N N 298 PC1 C3E C N N 299 PC1 C3F C N N 300 PC1 C3G C N N 301 PC1 C3H C N N 302 PC1 C3I C N N 303 PC1 H111 H N N 304 PC1 H112 H N N 305 PC1 H121 H N N 306 PC1 H122 H N N 307 PC1 H131 H N N 308 PC1 H132 H N N 309 PC1 H133 H N N 310 PC1 H141 H N N 311 PC1 H142 H N N 312 PC1 H143 H N N 313 PC1 H151 H N N 314 PC1 H152 H N N 315 PC1 H153 H N N 316 PC1 H11 H N N 317 PC1 H12 H N N 318 PC1 H2 H N N 319 PC1 H221 H N N 320 PC1 H222 H N N 321 PC1 H231 H N N 322 PC1 H232 H N N 323 PC1 H241 H N N 324 PC1 H242 H N N 325 PC1 H251 H N N 326 PC1 H252 H N N 327 PC1 H261 H N N 328 PC1 H262 H N N 329 PC1 H271 H N N 330 PC1 H272 H N N 331 PC1 H281 H N N 332 PC1 H282 H N N 333 PC1 H291 H N N 334 PC1 H292 H N N 335 PC1 H2A1 H N N 336 PC1 H2A2 H N N 337 PC1 H2B1 H N N 338 PC1 H2B2 H N N 339 PC1 H2C1 H N N 340 PC1 H2C2 H N N 341 PC1 H2D1 H N N 342 PC1 H2D2 H N N 343 PC1 H2E1 H N N 344 PC1 H2E2 H N N 345 PC1 H2F1 H N N 346 PC1 H2F2 H N N 347 PC1 H2G1 H N N 348 PC1 H2G2 H N N 349 PC1 H2H1 H N N 350 PC1 H2H2 H N N 351 PC1 H2I1 H N N 352 PC1 H2I2 H N N 353 PC1 H2I3 H N N 354 PC1 H31 H N N 355 PC1 H32 H N N 356 PC1 H321 H N N 357 PC1 H322 H N N 358 PC1 H331 H N N 359 PC1 H332 H N N 360 PC1 H341 H N N 361 PC1 H342 H N N 362 PC1 H351 H N N 363 PC1 H352 H N N 364 PC1 H361 H N N 365 PC1 H362 H N N 366 PC1 H371 H N N 367 PC1 H372 H N N 368 PC1 H381 H N N 369 PC1 H382 H N N 370 PC1 H391 H N N 371 PC1 H392 H N N 372 PC1 H3A1 H N N 373 PC1 H3A2 H N N 374 PC1 H3B1 H N N 375 PC1 H3B2 H N N 376 PC1 H3C1 H N N 377 PC1 H3C2 H N N 378 PC1 H3D1 H N N 379 PC1 H3D2 H N N 380 PC1 H3E1 H N N 381 PC1 H3E2 H N N 382 PC1 H3F1 H N N 383 PC1 H3F2 H N N 384 PC1 H3G1 H N N 385 PC1 H3G2 H N N 386 PC1 H3H1 H N N 387 PC1 H3H2 H N N 388 PC1 H3I1 H N N 389 PC1 H3I2 H N N 390 PC1 H3I3 H N N 391 PHE N N N N 392 PHE CA C N S 393 PHE C C N N 394 PHE O O N N 395 PHE CB C N N 396 PHE CG C Y N 397 PHE CD1 C Y N 398 PHE CD2 C Y N 399 PHE CE1 C Y N 400 PHE CE2 C Y N 401 PHE CZ C Y N 402 PHE OXT O N N 403 PHE H H N N 404 PHE H2 H N N 405 PHE HA H N N 406 PHE HB2 H N N 407 PHE HB3 H N N 408 PHE HD1 H N N 409 PHE HD2 H N N 410 PHE HE1 H N N 411 PHE HE2 H N N 412 PHE HZ H N N 413 PHE HXT H N N 414 PRO N N N N 415 PRO CA C N S 416 PRO C C N N 417 PRO O O N N 418 PRO CB C N N 419 PRO CG C N N 420 PRO CD C N N 421 PRO OXT O N N 422 PRO H H N N 423 PRO HA H N N 424 PRO HB2 H N N 425 PRO HB3 H N N 426 PRO HG2 H N N 427 PRO HG3 H N N 428 PRO HD2 H N N 429 PRO HD3 H N N 430 PRO HXT H N N 431 RET C1 C N N 432 RET C2 C N N 433 RET C3 C N N 434 RET C4 C N N 435 RET C5 C N N 436 RET C6 C N N 437 RET C7 C N N 438 RET C8 C N N 439 RET C9 C N N 440 RET C10 C N N 441 RET C11 C N N 442 RET C12 C N N 443 RET C13 C N N 444 RET C14 C N N 445 RET C15 C N N 446 RET O1 O N N 447 RET C16 C N N 448 RET C17 C N N 449 RET C18 C N N 450 RET C19 C N N 451 RET C20 C N N 452 RET H21 H N N 453 RET H22 H N N 454 RET H31 H N N 455 RET H32 H N N 456 RET H41 H N N 457 RET H42 H N N 458 RET H7 H N N 459 RET H8 H N N 460 RET H10 H N N 461 RET H11 H N N 462 RET H12 H N N 463 RET H14 H N N 464 RET H15 H N N 465 RET H161 H N N 466 RET H162 H N N 467 RET H163 H N N 468 RET H171 H N N 469 RET H172 H N N 470 RET H173 H N N 471 RET H181 H N N 472 RET H182 H N N 473 RET H183 H N N 474 RET H191 H N N 475 RET H192 H N N 476 RET H193 H N N 477 RET H201 H N N 478 RET H202 H N N 479 RET H203 H N N 480 SER N N N N 481 SER CA C N S 482 SER C C N N 483 SER O O N N 484 SER CB C N N 485 SER OG O N N 486 SER OXT O N N 487 SER H H N N 488 SER H2 H N N 489 SER HA H N N 490 SER HB2 H N N 491 SER HB3 H N N 492 SER HG H N N 493 SER HXT H N N 494 THR N N N N 495 THR CA C N S 496 THR C C N N 497 THR O O N N 498 THR CB C N R 499 THR OG1 O N N 500 THR CG2 C N N 501 THR OXT O N N 502 THR H H N N 503 THR H2 H N N 504 THR HA H N N 505 THR HB H N N 506 THR HG1 H N N 507 THR HG21 H N N 508 THR HG22 H N N 509 THR HG23 H N N 510 THR HXT H N N 511 TRP N N N N 512 TRP CA C N S 513 TRP C C N N 514 TRP O O N N 515 TRP CB C N N 516 TRP CG C Y N 517 TRP CD1 C Y N 518 TRP CD2 C Y N 519 TRP NE1 N Y N 520 TRP CE2 C Y N 521 TRP CE3 C Y N 522 TRP CZ2 C Y N 523 TRP CZ3 C Y N 524 TRP CH2 C Y N 525 TRP OXT O N N 526 TRP H H N N 527 TRP H2 H N N 528 TRP HA H N N 529 TRP HB2 H N N 530 TRP HB3 H N N 531 TRP HD1 H N N 532 TRP HE1 H N N 533 TRP HE3 H N N 534 TRP HZ2 H N N 535 TRP HZ3 H N N 536 TRP HH2 H N N 537 TRP HXT H N N 538 TYR N N N N 539 TYR CA C N S 540 TYR C C N N 541 TYR O O N N 542 TYR CB C N N 543 TYR CG C Y N 544 TYR CD1 C Y N 545 TYR CD2 C Y N 546 TYR CE1 C Y N 547 TYR CE2 C Y N 548 TYR CZ C Y N 549 TYR OH O N N 550 TYR OXT O N N 551 TYR H H N N 552 TYR H2 H N N 553 TYR HA H N N 554 TYR HB2 H N N 555 TYR HB3 H N N 556 TYR HD1 H N N 557 TYR HD2 H N N 558 TYR HE1 H N N 559 TYR HE2 H N N 560 TYR HH H N N 561 TYR HXT H N N 562 VAL N N N N 563 VAL CA C N S 564 VAL C C N N 565 VAL O O N N 566 VAL CB C N N 567 VAL CG1 C N N 568 VAL CG2 C N N 569 VAL OXT O N N 570 VAL H H N N 571 VAL H2 H N N 572 VAL HA H N N 573 VAL HB H N N 574 VAL HG11 H N N 575 VAL HG12 H N N 576 VAL HG13 H N N 577 VAL HG21 H N N 578 VAL HG22 H N N 579 VAL HG23 H N N 580 VAL HXT H N N 581 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PC1 O12 P sing N N 237 PC1 P O14 doub N N 238 PC1 P O13 sing N N 239 PC1 P O11 sing N N 240 PC1 O13 C11 sing N N 241 PC1 C11 C12 sing N N 242 PC1 C11 H111 sing N N 243 PC1 C11 H112 sing N N 244 PC1 C12 N sing N N 245 PC1 C12 H121 sing N N 246 PC1 C12 H122 sing N N 247 PC1 N C13 sing N N 248 PC1 N C14 sing N N 249 PC1 N C15 sing N N 250 PC1 C13 H131 sing N N 251 PC1 C13 H132 sing N N 252 PC1 C13 H133 sing N N 253 PC1 C14 H141 sing N N 254 PC1 C14 H142 sing N N 255 PC1 C14 H143 sing N N 256 PC1 C15 H151 sing N N 257 PC1 C15 H152 sing N N 258 PC1 C15 H153 sing N N 259 PC1 O11 C1 sing N N 260 PC1 C1 C2 sing N N 261 PC1 C1 H11 sing N N 262 PC1 C1 H12 sing N N 263 PC1 C2 O21 sing N N 264 PC1 C2 C3 sing N N 265 PC1 C2 H2 sing N N 266 PC1 O21 C21 sing N N 267 PC1 C21 O22 doub N N 268 PC1 C21 C22 sing N N 269 PC1 C22 C23 sing N N 270 PC1 C22 H221 sing N N 271 PC1 C22 H222 sing N N 272 PC1 C23 C24 sing N N 273 PC1 C23 H231 sing N N 274 PC1 C23 H232 sing N N 275 PC1 C24 C25 sing N N 276 PC1 C24 H241 sing N N 277 PC1 C24 H242 sing N N 278 PC1 C25 C26 sing N N 279 PC1 C25 H251 sing N N 280 PC1 C25 H252 sing N N 281 PC1 C26 C27 sing N N 282 PC1 C26 H261 sing N N 283 PC1 C26 H262 sing N N 284 PC1 C27 C28 sing N N 285 PC1 C27 H271 sing N N 286 PC1 C27 H272 sing N N 287 PC1 C28 C29 sing N N 288 PC1 C28 H281 sing N N 289 PC1 C28 H282 sing N N 290 PC1 C29 C2A sing N N 291 PC1 C29 H291 sing N N 292 PC1 C29 H292 sing N N 293 PC1 C2A C2B sing N N 294 PC1 C2A H2A1 sing N N 295 PC1 C2A H2A2 sing N N 296 PC1 C2B C2C sing N N 297 PC1 C2B H2B1 sing N N 298 PC1 C2B H2B2 sing N N 299 PC1 C2C C2D sing N N 300 PC1 C2C H2C1 sing N N 301 PC1 C2C H2C2 sing N N 302 PC1 C2D C2E sing N N 303 PC1 C2D H2D1 sing N N 304 PC1 C2D H2D2 sing N N 305 PC1 C2E C2F sing N N 306 PC1 C2E H2E1 sing N N 307 PC1 C2E H2E2 sing N N 308 PC1 C2F C2G sing N N 309 PC1 C2F H2F1 sing N N 310 PC1 C2F H2F2 sing N N 311 PC1 C2G C2H sing N N 312 PC1 C2G H2G1 sing N N 313 PC1 C2G H2G2 sing N N 314 PC1 C2H C2I sing N N 315 PC1 C2H H2H1 sing N N 316 PC1 C2H H2H2 sing N N 317 PC1 C2I H2I1 sing N N 318 PC1 C2I H2I2 sing N N 319 PC1 C2I H2I3 sing N N 320 PC1 C3 O31 sing N N 321 PC1 C3 H31 sing N N 322 PC1 C3 H32 sing N N 323 PC1 O31 C31 sing N N 324 PC1 C31 O32 doub N N 325 PC1 C31 C32 sing N N 326 PC1 C32 C33 sing N N 327 PC1 C32 H321 sing N N 328 PC1 C32 H322 sing N N 329 PC1 C33 C34 sing N N 330 PC1 C33 H331 sing N N 331 PC1 C33 H332 sing N N 332 PC1 C34 C35 sing N N 333 PC1 C34 H341 sing N N 334 PC1 C34 H342 sing N N 335 PC1 C35 C36 sing N N 336 PC1 C35 H351 sing N N 337 PC1 C35 H352 sing N N 338 PC1 C36 C37 sing N N 339 PC1 C36 H361 sing N N 340 PC1 C36 H362 sing N N 341 PC1 C37 C38 sing N N 342 PC1 C37 H371 sing N N 343 PC1 C37 H372 sing N N 344 PC1 C38 C39 sing N N 345 PC1 C38 H381 sing N N 346 PC1 C38 H382 sing N N 347 PC1 C39 C3A sing N N 348 PC1 C39 H391 sing N N 349 PC1 C39 H392 sing N N 350 PC1 C3A C3B sing N N 351 PC1 C3A H3A1 sing N N 352 PC1 C3A H3A2 sing N N 353 PC1 C3B C3C sing N N 354 PC1 C3B H3B1 sing N N 355 PC1 C3B H3B2 sing N N 356 PC1 C3C C3D sing N N 357 PC1 C3C H3C1 sing N N 358 PC1 C3C H3C2 sing N N 359 PC1 C3D C3E sing N N 360 PC1 C3D H3D1 sing N N 361 PC1 C3D H3D2 sing N N 362 PC1 C3E C3F sing N N 363 PC1 C3E H3E1 sing N N 364 PC1 C3E H3E2 sing N N 365 PC1 C3F C3G sing N N 366 PC1 C3F H3F1 sing N N 367 PC1 C3F H3F2 sing N N 368 PC1 C3G C3H sing N N 369 PC1 C3G H3G1 sing N N 370 PC1 C3G H3G2 sing N N 371 PC1 C3H C3I sing N N 372 PC1 C3H H3H1 sing N N 373 PC1 C3H H3H2 sing N N 374 PC1 C3I H3I1 sing N N 375 PC1 C3I H3I2 sing N N 376 PC1 C3I H3I3 sing N N 377 PHE N CA sing N N 378 PHE N H sing N N 379 PHE N H2 sing N N 380 PHE CA C sing N N 381 PHE CA CB sing N N 382 PHE CA HA sing N N 383 PHE C O doub N N 384 PHE C OXT sing N N 385 PHE CB CG sing N N 386 PHE CB HB2 sing N N 387 PHE CB HB3 sing N N 388 PHE CG CD1 doub Y N 389 PHE CG CD2 sing Y N 390 PHE CD1 CE1 sing Y N 391 PHE CD1 HD1 sing N N 392 PHE CD2 CE2 doub Y N 393 PHE CD2 HD2 sing N N 394 PHE CE1 CZ doub Y N 395 PHE CE1 HE1 sing N N 396 PHE CE2 CZ sing Y N 397 PHE CE2 HE2 sing N N 398 PHE CZ HZ sing N N 399 PHE OXT HXT sing N N 400 PRO N CA sing N N 401 PRO N CD sing N N 402 PRO N H sing N N 403 PRO CA C sing N N 404 PRO CA CB sing N N 405 PRO CA HA sing N N 406 PRO C O doub N N 407 PRO C OXT sing N N 408 PRO CB CG sing N N 409 PRO CB HB2 sing N N 410 PRO CB HB3 sing N N 411 PRO CG CD sing N N 412 PRO CG HG2 sing N N 413 PRO CG HG3 sing N N 414 PRO CD HD2 sing N N 415 PRO CD HD3 sing N N 416 PRO OXT HXT sing N N 417 RET C1 C2 sing N N 418 RET C1 C6 sing N N 419 RET C1 C16 sing N N 420 RET C1 C17 sing N N 421 RET C2 C3 sing N N 422 RET C2 H21 sing N N 423 RET C2 H22 sing N N 424 RET C3 C4 sing N N 425 RET C3 H31 sing N N 426 RET C3 H32 sing N N 427 RET C4 C5 sing N N 428 RET C4 H41 sing N N 429 RET C4 H42 sing N N 430 RET C5 C6 doub N N 431 RET C5 C18 sing N N 432 RET C6 C7 sing N N 433 RET C7 C8 doub N E 434 RET C7 H7 sing N N 435 RET C8 C9 sing N N 436 RET C8 H8 sing N N 437 RET C9 C10 doub N E 438 RET C9 C19 sing N N 439 RET C10 C11 sing N N 440 RET C10 H10 sing N N 441 RET C11 C12 doub N E 442 RET C11 H11 sing N N 443 RET C12 C13 sing N N 444 RET C12 H12 sing N N 445 RET C13 C14 doub N E 446 RET C13 C20 sing N N 447 RET C14 C15 sing N N 448 RET C14 H14 sing N N 449 RET C15 O1 doub N N 450 RET C15 H15 sing N N 451 RET C16 H161 sing N N 452 RET C16 H162 sing N N 453 RET C16 H163 sing N N 454 RET C17 H171 sing N N 455 RET C17 H172 sing N N 456 RET C17 H173 sing N N 457 RET C18 H181 sing N N 458 RET C18 H182 sing N N 459 RET C18 H183 sing N N 460 RET C19 H191 sing N N 461 RET C19 H192 sing N N 462 RET C19 H193 sing N N 463 RET C20 H201 sing N N 464 RET C20 H202 sing N N 465 RET C20 H203 sing N N 466 SER N CA sing N N 467 SER N H sing N N 468 SER N H2 sing N N 469 SER CA C sing N N 470 SER CA CB sing N N 471 SER CA HA sing N N 472 SER C O doub N N 473 SER C OXT sing N N 474 SER CB OG sing N N 475 SER CB HB2 sing N N 476 SER CB HB3 sing N N 477 SER OG HG sing N N 478 SER OXT HXT sing N N 479 THR N CA sing N N 480 THR N H sing N N 481 THR N H2 sing N N 482 THR CA C sing N N 483 THR CA CB sing N N 484 THR CA HA sing N N 485 THR C O doub N N 486 THR C OXT sing N N 487 THR CB OG1 sing N N 488 THR CB CG2 sing N N 489 THR CB HB sing N N 490 THR OG1 HG1 sing N N 491 THR CG2 HG21 sing N N 492 THR CG2 HG22 sing N N 493 THR CG2 HG23 sing N N 494 THR OXT HXT sing N N 495 TRP N CA sing N N 496 TRP N H sing N N 497 TRP N H2 sing N N 498 TRP CA C sing N N 499 TRP CA CB sing N N 500 TRP CA HA sing N N 501 TRP C O doub N N 502 TRP C OXT sing N N 503 TRP CB CG sing N N 504 TRP CB HB2 sing N N 505 TRP CB HB3 sing N N 506 TRP CG CD1 doub Y N 507 TRP CG CD2 sing Y N 508 TRP CD1 NE1 sing Y N 509 TRP CD1 HD1 sing N N 510 TRP CD2 CE2 doub Y N 511 TRP CD2 CE3 sing Y N 512 TRP NE1 CE2 sing Y N 513 TRP NE1 HE1 sing N N 514 TRP CE2 CZ2 sing Y N 515 TRP CE3 CZ3 doub Y N 516 TRP CE3 HE3 sing N N 517 TRP CZ2 CH2 doub Y N 518 TRP CZ2 HZ2 sing N N 519 TRP CZ3 CH2 sing Y N 520 TRP CZ3 HZ3 sing N N 521 TRP CH2 HH2 sing N N 522 TRP OXT HXT sing N N 523 TYR N CA sing N N 524 TYR N H sing N N 525 TYR N H2 sing N N 526 TYR CA C sing N N 527 TYR CA CB sing N N 528 TYR CA HA sing N N 529 TYR C O doub N N 530 TYR C OXT sing N N 531 TYR CB CG sing N N 532 TYR CB HB2 sing N N 533 TYR CB HB3 sing N N 534 TYR CG CD1 doub Y N 535 TYR CG CD2 sing Y N 536 TYR CD1 CE1 sing Y N 537 TYR CD1 HD1 sing N N 538 TYR CD2 CE2 doub Y N 539 TYR CD2 HD2 sing N N 540 TYR CE1 CZ doub Y N 541 TYR CE1 HE1 sing N N 542 TYR CE2 CZ sing Y N 543 TYR CE2 HE2 sing N N 544 TYR CZ OH sing N N 545 TYR OH HH sing N N 546 TYR OXT HXT sing N N 547 VAL N CA sing N N 548 VAL N H sing N N 549 VAL N H2 sing N N 550 VAL CA C sing N N 551 VAL CA CB sing N N 552 VAL CA HA sing N N 553 VAL C O doub N N 554 VAL C OXT sing N N 555 VAL CB CG1 sing N N 556 VAL CB CG2 sing N N 557 VAL CB HB sing N N 558 VAL CG1 HG11 sing N N 559 VAL CG1 HG12 sing N N 560 VAL CG1 HG13 sing N N 561 VAL CG2 HG21 sing N N 562 VAL CG2 HG22 sing N N 563 VAL CG2 HG23 sing N N 564 VAL OXT HXT sing N N 565 # _em_admin.current_status REL _em_admin.deposition_date 2024-02-22 _em_admin.deposition_site PDBJ _em_admin.entry_id 8YEL _em_admin.last_update 2024-09-04 _em_admin.map_release_date 2024-09-04 _em_admin.title 'Cryo-EM structure of the channelrhodopsin GtCCR4' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 20 mM C4H11NO3 1 'Tris(hydroxymethyl)aminomethane' 1 150 mM NaCl 2 'Sodium chloride' 1 2 mM C4H10O2S2 3 Dithiothreitol 1 0.01 % C56H92O29 4 Digitonin # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units ? _em_entity_assembly_molwt.value ? # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 55529 _em_entity_assembly_naturalsource.organism 'Guillardia theta' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 7108 _em_entity_assembly_recombinant.organism 'Spodoptera frugiperda' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 2 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 1 _em_image_recording.num_real_images 16366 # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 5403048 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? cryoSPARC 3.3.2 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 3.3.2 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? MOLREP ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'MODEL REFINEMENT' ? 10 ? 1 ? Servalcat ? 'INITIAL EULER ASSIGNMENT' ? 11 1 ? ? cryoSPARC 3.3.2 'FINAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC 3.3.2 CLASSIFICATION ? 13 1 ? ? cryoSPARC 3.3.2 RECONSTRUCTION ? 14 1 ? ? cryoSPARC 3.3.2 # _em_specimen.concentration 5 _em_specimen.details 'The protein was reconstituted in lipid nanodiscs.' _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 22KJ0577 1 'Japan Society for the Promotion of Science (JSPS)' Japan 19H05777 2 'Japan Society for the Promotion of Science (JSPS)' Japan 22K19371 3 'Japan Society for the Promotion of Science (JSPS)' Japan 22H02751 4 'Japan Society for the Promotion of Science (JSPS)' Japan 21H05037 5 'Japan Agency for Medical Research and Development (AMED)' Japan JP233fa627001 6 'Japan Agency for Medical Research and Development (AMED)' Japan JP23ama121002 7 'Japan Agency for Medical Research and Development (AMED)' Japan JP23ama121012 8 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? # _atom_sites.entry_id 8YEL _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P S # loop_