data_8YFT # _entry.id 8YFT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YFT pdb_00008yft 10.2210/pdb8yft/pdb WWPDB D_1300045558 ? ? EMDB EMD-39229 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-10-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YFT _pdbx_database_status.recvd_initial_deposition_date 2024-02-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBC _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of SARS-CoV-2 alpha variant spike protein in complex with raccoon dog ACE2 (local refinement)' _pdbx_database_related.db_id EMD-39229 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 gaof@im.ac.cn 'George Fu' Gao ? 'principal investigator/group leader' 0000-0002-3869-615X 3 jxqi@im.ac.cn Jianxun Qi ? 'principal investigator/group leader' 0000-0002-9358-4732 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Li, L.J.' 1 ? 'Luo, C.L.' 2 ? 'Qi, J.X.' 3 ? 'Gao, G.F.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural basis and analysis of raccoon dog ACE2 binding to different SARS-CoV-2 spike RBDs' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Luo, C.L.' 1 ? primary 'Li, L.J.' 2 ? primary 'Gao, G.F.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Angiotensin-converting enzyme' 70600.086 1 3.4.-.- ? ? ? 2 polymer man 'Spike protein S1' 25171.408 1 ? ? 'RBD domain' ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 4 ? ? ? ? 4 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 5 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QSTEDLVNTFLEKFNYEAEELSYQSSLASWNYNTNITDENLQKMNNAGAKWSAFYEEQSKLAKTYPLEEIQDSTVKRQLR ALQHSGSSVLSADKNQRLNTILNSMSTIYSTGKACNPSNPQECLLLEPGLDDIMENSKDYNERLWAWEGWRSEVGKQLRP LYEEYVALKNEMARANNYEDYGDYWRGDYEEEWENGYNYSRNQLIDDVEHTFTQIMPLYQHLHAYVRTKLMDTYPSYISP TGCLPAHLLGDMWGRFWTNLYPLTVPFGQKPNIDVTNAMVNQSWDARKIFKEAEKFFVSVGLPNMTQGFWENSMLTEPSD SWKVVCHPTAWDLGRGDFRIKMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEGFHEAVGEIMSLSAATPNHL KNIGLLPPSFFEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKTWWEMKRNIVGVVEPVPHDETYC DPASLFHVANDYSFIRYYTRTIYQFQFQEALCQIAKHEGPLHKCDISNSSEAGQKLLEMLKLGKSKPWTYALEIVVGAKN MDVRPLLNYFEPLFTWLKEQNRNSFVGWNTDWSPYADQSHHHHHH ; ;QSTEDLVNTFLEKFNYEAEELSYQSSLASWNYNTNITDENLQKMNNAGAKWSAFYEEQSKLAKTYPLEEIQDSTVKRQLR ALQHSGSSVLSADKNQRLNTILNSMSTIYSTGKACNPSNPQECLLLEPGLDDIMENSKDYNERLWAWEGWRSEVGKQLRP LYEEYVALKNEMARANNYEDYGDYWRGDYEEEWENGYNYSRNQLIDDVEHTFTQIMPLYQHLHAYVRTKLMDTYPSYISP TGCLPAHLLGDMWGRFWTNLYPLTVPFGQKPNIDVTNAMVNQSWDARKIFKEAEKFFVSVGLPNMTQGFWENSMLTEPSD SWKVVCHPTAWDLGRGDFRIKMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEGFHEAVGEIMSLSAATPNHL KNIGLLPPSFFEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKTWWEMKRNIVGVVEPVPHDETYC DPASLFHVANDYSFIRYYTRTIYQFQFQEALCQIAKHEGPLHKCDISNSSEAGQKLLEMLKLGKSKPWTYALEIVVGAKN MDVRPLLNYFEPLFTWLKEQNRNSFVGWNTDWSPYADQSHHHHHH ; A ? 2 'polypeptide(L)' no no ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF ; ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTYGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'ZINC ION' ZN 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 SER n 1 3 THR n 1 4 GLU n 1 5 ASP n 1 6 LEU n 1 7 VAL n 1 8 ASN n 1 9 THR n 1 10 PHE n 1 11 LEU n 1 12 GLU n 1 13 LYS n 1 14 PHE n 1 15 ASN n 1 16 TYR n 1 17 GLU n 1 18 ALA n 1 19 GLU n 1 20 GLU n 1 21 LEU n 1 22 SER n 1 23 TYR n 1 24 GLN n 1 25 SER n 1 26 SER n 1 27 LEU n 1 28 ALA n 1 29 SER n 1 30 TRP n 1 31 ASN n 1 32 TYR n 1 33 ASN n 1 34 THR n 1 35 ASN n 1 36 ILE n 1 37 THR n 1 38 ASP n 1 39 GLU n 1 40 ASN n 1 41 LEU n 1 42 GLN n 1 43 LYS n 1 44 MET n 1 45 ASN n 1 46 ASN n 1 47 ALA n 1 48 GLY n 1 49 ALA n 1 50 LYS n 1 51 TRP n 1 52 SER n 1 53 ALA n 1 54 PHE n 1 55 TYR n 1 56 GLU n 1 57 GLU n 1 58 GLN n 1 59 SER n 1 60 LYS n 1 61 LEU n 1 62 ALA n 1 63 LYS n 1 64 THR n 1 65 TYR n 1 66 PRO n 1 67 LEU n 1 68 GLU n 1 69 GLU n 1 70 ILE n 1 71 GLN n 1 72 ASP n 1 73 SER n 1 74 THR n 1 75 VAL n 1 76 LYS n 1 77 ARG n 1 78 GLN n 1 79 LEU n 1 80 ARG n 1 81 ALA n 1 82 LEU n 1 83 GLN n 1 84 HIS n 1 85 SER n 1 86 GLY n 1 87 SER n 1 88 SER n 1 89 VAL n 1 90 LEU n 1 91 SER n 1 92 ALA n 1 93 ASP n 1 94 LYS n 1 95 ASN n 1 96 GLN n 1 97 ARG n 1 98 LEU n 1 99 ASN n 1 100 THR n 1 101 ILE n 1 102 LEU n 1 103 ASN n 1 104 SER n 1 105 MET n 1 106 SER n 1 107 THR n 1 108 ILE n 1 109 TYR n 1 110 SER n 1 111 THR n 1 112 GLY n 1 113 LYS n 1 114 ALA n 1 115 CYS n 1 116 ASN n 1 117 PRO n 1 118 SER n 1 119 ASN n 1 120 PRO n 1 121 GLN n 1 122 GLU n 1 123 CYS n 1 124 LEU n 1 125 LEU n 1 126 LEU n 1 127 GLU n 1 128 PRO n 1 129 GLY n 1 130 LEU n 1 131 ASP n 1 132 ASP n 1 133 ILE n 1 134 MET n 1 135 GLU n 1 136 ASN n 1 137 SER n 1 138 LYS n 1 139 ASP n 1 140 TYR n 1 141 ASN n 1 142 GLU n 1 143 ARG n 1 144 LEU n 1 145 TRP n 1 146 ALA n 1 147 TRP n 1 148 GLU n 1 149 GLY n 1 150 TRP n 1 151 ARG n 1 152 SER n 1 153 GLU n 1 154 VAL n 1 155 GLY n 1 156 LYS n 1 157 GLN n 1 158 LEU n 1 159 ARG n 1 160 PRO n 1 161 LEU n 1 162 TYR n 1 163 GLU n 1 164 GLU n 1 165 TYR n 1 166 VAL n 1 167 ALA n 1 168 LEU n 1 169 LYS n 1 170 ASN n 1 171 GLU n 1 172 MET n 1 173 ALA n 1 174 ARG n 1 175 ALA n 1 176 ASN n 1 177 ASN n 1 178 TYR n 1 179 GLU n 1 180 ASP n 1 181 TYR n 1 182 GLY n 1 183 ASP n 1 184 TYR n 1 185 TRP n 1 186 ARG n 1 187 GLY n 1 188 ASP n 1 189 TYR n 1 190 GLU n 1 191 GLU n 1 192 GLU n 1 193 TRP n 1 194 GLU n 1 195 ASN n 1 196 GLY n 1 197 TYR n 1 198 ASN n 1 199 TYR n 1 200 SER n 1 201 ARG n 1 202 ASN n 1 203 GLN n 1 204 LEU n 1 205 ILE n 1 206 ASP n 1 207 ASP n 1 208 VAL n 1 209 GLU n 1 210 HIS n 1 211 THR n 1 212 PHE n 1 213 THR n 1 214 GLN n 1 215 ILE n 1 216 MET n 1 217 PRO n 1 218 LEU n 1 219 TYR n 1 220 GLN n 1 221 HIS n 1 222 LEU n 1 223 HIS n 1 224 ALA n 1 225 TYR n 1 226 VAL n 1 227 ARG n 1 228 THR n 1 229 LYS n 1 230 LEU n 1 231 MET n 1 232 ASP n 1 233 THR n 1 234 TYR n 1 235 PRO n 1 236 SER n 1 237 TYR n 1 238 ILE n 1 239 SER n 1 240 PRO n 1 241 THR n 1 242 GLY n 1 243 CYS n 1 244 LEU n 1 245 PRO n 1 246 ALA n 1 247 HIS n 1 248 LEU n 1 249 LEU n 1 250 GLY n 1 251 ASP n 1 252 MET n 1 253 TRP n 1 254 GLY n 1 255 ARG n 1 256 PHE n 1 257 TRP n 1 258 THR n 1 259 ASN n 1 260 LEU n 1 261 TYR n 1 262 PRO n 1 263 LEU n 1 264 THR n 1 265 VAL n 1 266 PRO n 1 267 PHE n 1 268 GLY n 1 269 GLN n 1 270 LYS n 1 271 PRO n 1 272 ASN n 1 273 ILE n 1 274 ASP n 1 275 VAL n 1 276 THR n 1 277 ASN n 1 278 ALA n 1 279 MET n 1 280 VAL n 1 281 ASN n 1 282 GLN n 1 283 SER n 1 284 TRP n 1 285 ASP n 1 286 ALA n 1 287 ARG n 1 288 LYS n 1 289 ILE n 1 290 PHE n 1 291 LYS n 1 292 GLU n 1 293 ALA n 1 294 GLU n 1 295 LYS n 1 296 PHE n 1 297 PHE n 1 298 VAL n 1 299 SER n 1 300 VAL n 1 301 GLY n 1 302 LEU n 1 303 PRO n 1 304 ASN n 1 305 MET n 1 306 THR n 1 307 GLN n 1 308 GLY n 1 309 PHE n 1 310 TRP n 1 311 GLU n 1 312 ASN n 1 313 SER n 1 314 MET n 1 315 LEU n 1 316 THR n 1 317 GLU n 1 318 PRO n 1 319 SER n 1 320 ASP n 1 321 SER n 1 322 TRP n 1 323 LYS n 1 324 VAL n 1 325 VAL n 1 326 CYS n 1 327 HIS n 1 328 PRO n 1 329 THR n 1 330 ALA n 1 331 TRP n 1 332 ASP n 1 333 LEU n 1 334 GLY n 1 335 ARG n 1 336 GLY n 1 337 ASP n 1 338 PHE n 1 339 ARG n 1 340 ILE n 1 341 LYS n 1 342 MET n 1 343 CYS n 1 344 THR n 1 345 LYS n 1 346 VAL n 1 347 THR n 1 348 MET n 1 349 ASP n 1 350 ASP n 1 351 PHE n 1 352 LEU n 1 353 THR n 1 354 ALA n 1 355 HIS n 1 356 HIS n 1 357 GLU n 1 358 MET n 1 359 GLY n 1 360 HIS n 1 361 ILE n 1 362 GLN n 1 363 TYR n 1 364 ASP n 1 365 MET n 1 366 ALA n 1 367 TYR n 1 368 ALA n 1 369 ALA n 1 370 GLN n 1 371 PRO n 1 372 PHE n 1 373 LEU n 1 374 LEU n 1 375 ARG n 1 376 ASN n 1 377 GLY n 1 378 ALA n 1 379 ASN n 1 380 GLU n 1 381 GLY n 1 382 PHE n 1 383 HIS n 1 384 GLU n 1 385 ALA n 1 386 VAL n 1 387 GLY n 1 388 GLU n 1 389 ILE n 1 390 MET n 1 391 SER n 1 392 LEU n 1 393 SER n 1 394 ALA n 1 395 ALA n 1 396 THR n 1 397 PRO n 1 398 ASN n 1 399 HIS n 1 400 LEU n 1 401 LYS n 1 402 ASN n 1 403 ILE n 1 404 GLY n 1 405 LEU n 1 406 LEU n 1 407 PRO n 1 408 PRO n 1 409 SER n 1 410 PHE n 1 411 PHE n 1 412 GLU n 1 413 ASP n 1 414 SER n 1 415 GLU n 1 416 THR n 1 417 GLU n 1 418 ILE n 1 419 ASN n 1 420 PHE n 1 421 LEU n 1 422 LEU n 1 423 LYS n 1 424 GLN n 1 425 ALA n 1 426 LEU n 1 427 THR n 1 428 ILE n 1 429 VAL n 1 430 GLY n 1 431 THR n 1 432 LEU n 1 433 PRO n 1 434 PHE n 1 435 THR n 1 436 TYR n 1 437 MET n 1 438 LEU n 1 439 GLU n 1 440 LYS n 1 441 TRP n 1 442 ARG n 1 443 TRP n 1 444 MET n 1 445 VAL n 1 446 PHE n 1 447 LYS n 1 448 GLY n 1 449 GLU n 1 450 ILE n 1 451 PRO n 1 452 LYS n 1 453 ASP n 1 454 GLN n 1 455 TRP n 1 456 MET n 1 457 LYS n 1 458 THR n 1 459 TRP n 1 460 TRP n 1 461 GLU n 1 462 MET n 1 463 LYS n 1 464 ARG n 1 465 ASN n 1 466 ILE n 1 467 VAL n 1 468 GLY n 1 469 VAL n 1 470 VAL n 1 471 GLU n 1 472 PRO n 1 473 VAL n 1 474 PRO n 1 475 HIS n 1 476 ASP n 1 477 GLU n 1 478 THR n 1 479 TYR n 1 480 CYS n 1 481 ASP n 1 482 PRO n 1 483 ALA n 1 484 SER n 1 485 LEU n 1 486 PHE n 1 487 HIS n 1 488 VAL n 1 489 ALA n 1 490 ASN n 1 491 ASP n 1 492 TYR n 1 493 SER n 1 494 PHE n 1 495 ILE n 1 496 ARG n 1 497 TYR n 1 498 TYR n 1 499 THR n 1 500 ARG n 1 501 THR n 1 502 ILE n 1 503 TYR n 1 504 GLN n 1 505 PHE n 1 506 GLN n 1 507 PHE n 1 508 GLN n 1 509 GLU n 1 510 ALA n 1 511 LEU n 1 512 CYS n 1 513 GLN n 1 514 ILE n 1 515 ALA n 1 516 LYS n 1 517 HIS n 1 518 GLU n 1 519 GLY n 1 520 PRO n 1 521 LEU n 1 522 HIS n 1 523 LYS n 1 524 CYS n 1 525 ASP n 1 526 ILE n 1 527 SER n 1 528 ASN n 1 529 SER n 1 530 SER n 1 531 GLU n 1 532 ALA n 1 533 GLY n 1 534 GLN n 1 535 LYS n 1 536 LEU n 1 537 LEU n 1 538 GLU n 1 539 MET n 1 540 LEU n 1 541 LYS n 1 542 LEU n 1 543 GLY n 1 544 LYS n 1 545 SER n 1 546 LYS n 1 547 PRO n 1 548 TRP n 1 549 THR n 1 550 TYR n 1 551 ALA n 1 552 LEU n 1 553 GLU n 1 554 ILE n 1 555 VAL n 1 556 VAL n 1 557 GLY n 1 558 ALA n 1 559 LYS n 1 560 ASN n 1 561 MET n 1 562 ASP n 1 563 VAL n 1 564 ARG n 1 565 PRO n 1 566 LEU n 1 567 LEU n 1 568 ASN n 1 569 TYR n 1 570 PHE n 1 571 GLU n 1 572 PRO n 1 573 LEU n 1 574 PHE n 1 575 THR n 1 576 TRP n 1 577 LEU n 1 578 LYS n 1 579 GLU n 1 580 GLN n 1 581 ASN n 1 582 ARG n 1 583 ASN n 1 584 SER n 1 585 PHE n 1 586 VAL n 1 587 GLY n 1 588 TRP n 1 589 ASN n 1 590 THR n 1 591 ASP n 1 592 TRP n 1 593 SER n 1 594 PRO n 1 595 TYR n 1 596 ALA n 1 597 ASP n 1 598 GLN n 1 599 SER n 1 600 HIS n 1 601 HIS n 1 602 HIS n 1 603 HIS n 1 604 HIS n 1 605 HIS n 2 1 ARG n 2 2 VAL n 2 3 GLN n 2 4 PRO n 2 5 THR n 2 6 GLU n 2 7 SER n 2 8 ILE n 2 9 VAL n 2 10 ARG n 2 11 PHE n 2 12 PRO n 2 13 ASN n 2 14 ILE n 2 15 THR n 2 16 ASN n 2 17 LEU n 2 18 CYS n 2 19 PRO n 2 20 PHE n 2 21 GLY n 2 22 GLU n 2 23 VAL n 2 24 PHE n 2 25 ASN n 2 26 ALA n 2 27 THR n 2 28 ARG n 2 29 PHE n 2 30 ALA n 2 31 SER n 2 32 VAL n 2 33 TYR n 2 34 ALA n 2 35 TRP n 2 36 ASN n 2 37 ARG n 2 38 LYS n 2 39 ARG n 2 40 ILE n 2 41 SER n 2 42 ASN n 2 43 CYS n 2 44 VAL n 2 45 ALA n 2 46 ASP n 2 47 TYR n 2 48 SER n 2 49 VAL n 2 50 LEU n 2 51 TYR n 2 52 ASN n 2 53 SER n 2 54 ALA n 2 55 SER n 2 56 PHE n 2 57 SER n 2 58 THR n 2 59 PHE n 2 60 LYS n 2 61 CYS n 2 62 TYR n 2 63 GLY n 2 64 VAL n 2 65 SER n 2 66 PRO n 2 67 THR n 2 68 LYS n 2 69 LEU n 2 70 ASN n 2 71 ASP n 2 72 LEU n 2 73 CYS n 2 74 PHE n 2 75 THR n 2 76 ASN n 2 77 VAL n 2 78 TYR n 2 79 ALA n 2 80 ASP n 2 81 SER n 2 82 PHE n 2 83 VAL n 2 84 ILE n 2 85 ARG n 2 86 GLY n 2 87 ASP n 2 88 GLU n 2 89 VAL n 2 90 ARG n 2 91 GLN n 2 92 ILE n 2 93 ALA n 2 94 PRO n 2 95 GLY n 2 96 GLN n 2 97 THR n 2 98 GLY n 2 99 LYS n 2 100 ILE n 2 101 ALA n 2 102 ASP n 2 103 TYR n 2 104 ASN n 2 105 TYR n 2 106 LYS n 2 107 LEU n 2 108 PRO n 2 109 ASP n 2 110 ASP n 2 111 PHE n 2 112 THR n 2 113 GLY n 2 114 CYS n 2 115 VAL n 2 116 ILE n 2 117 ALA n 2 118 TRP n 2 119 ASN n 2 120 SER n 2 121 ASN n 2 122 ASN n 2 123 LEU n 2 124 ASP n 2 125 SER n 2 126 LYS n 2 127 VAL n 2 128 GLY n 2 129 GLY n 2 130 ASN n 2 131 TYR n 2 132 ASN n 2 133 TYR n 2 134 LEU n 2 135 TYR n 2 136 ARG n 2 137 LEU n 2 138 PHE n 2 139 ARG n 2 140 LYS n 2 141 SER n 2 142 ASN n 2 143 LEU n 2 144 LYS n 2 145 PRO n 2 146 PHE n 2 147 GLU n 2 148 ARG n 2 149 ASP n 2 150 ILE n 2 151 SER n 2 152 THR n 2 153 GLU n 2 154 ILE n 2 155 TYR n 2 156 GLN n 2 157 ALA n 2 158 GLY n 2 159 SER n 2 160 THR n 2 161 PRO n 2 162 CYS n 2 163 ASN n 2 164 GLY n 2 165 VAL n 2 166 GLU n 2 167 GLY n 2 168 PHE n 2 169 ASN n 2 170 CYS n 2 171 TYR n 2 172 PHE n 2 173 PRO n 2 174 LEU n 2 175 GLN n 2 176 SER n 2 177 TYR n 2 178 GLY n 2 179 PHE n 2 180 GLN n 2 181 PRO n 2 182 THR n 2 183 TYR n 2 184 GLY n 2 185 VAL n 2 186 GLY n 2 187 TYR n 2 188 GLN n 2 189 PRO n 2 190 TYR n 2 191 ARG n 2 192 VAL n 2 193 VAL n 2 194 VAL n 2 195 LEU n 2 196 SER n 2 197 PHE n 2 198 GLU n 2 199 LEU n 2 200 LEU n 2 201 HIS n 2 202 ALA n 2 203 PRO n 2 204 ALA n 2 205 THR n 2 206 VAL n 2 207 CYS n 2 208 GLY n 2 209 PRO n 2 210 LYS n 2 211 LYS n 2 212 SER n 2 213 THR n 2 214 ASN n 2 215 LEU n 2 216 VAL n 2 217 LYS n 2 218 ASN n 2 219 LYS n 2 220 CYS n 2 221 VAL n 2 222 ASN n 2 223 PHE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 605 'raccoon dog' ? 'ACE2, NYPRO_LOCUS14582' ? ? ? ? ? ? 'Nyctereutes procyonoides' 34880 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 223 ? ? 'S, 2' ? Alpha ? ? ? ? 'Severe acute respiratory syndrome coronavirus 2' 2697049 ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 3 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 19 19 GLN GLN A . n A 1 2 SER 2 20 20 SER SER A . n A 1 3 THR 3 21 21 THR THR A . n A 1 4 GLU 4 22 22 GLU GLU A . n A 1 5 ASP 5 23 23 ASP ASP A . n A 1 6 LEU 6 24 24 LEU LEU A . n A 1 7 VAL 7 25 25 VAL VAL A . n A 1 8 ASN 8 26 26 ASN ASN A . n A 1 9 THR 9 27 27 THR THR A . n A 1 10 PHE 10 28 28 PHE PHE A . n A 1 11 LEU 11 29 29 LEU LEU A . n A 1 12 GLU 12 30 30 GLU GLU A . n A 1 13 LYS 13 31 31 LYS LYS A . n A 1 14 PHE 14 32 32 PHE PHE A . n A 1 15 ASN 15 33 33 ASN ASN A . n A 1 16 TYR 16 34 34 TYR TYR A . n A 1 17 GLU 17 35 35 GLU GLU A . n A 1 18 ALA 18 36 36 ALA ALA A . n A 1 19 GLU 19 37 37 GLU GLU A . n A 1 20 GLU 20 38 38 GLU GLU A . n A 1 21 LEU 21 39 39 LEU LEU A . n A 1 22 SER 22 40 40 SER SER A . n A 1 23 TYR 23 41 41 TYR TYR A . n A 1 24 GLN 24 42 42 GLN GLN A . n A 1 25 SER 25 43 43 SER SER A . n A 1 26 SER 26 44 44 SER SER A . n A 1 27 LEU 27 45 45 LEU LEU A . n A 1 28 ALA 28 46 46 ALA ALA A . n A 1 29 SER 29 47 47 SER SER A . n A 1 30 TRP 30 48 48 TRP TRP A . n A 1 31 ASN 31 49 49 ASN ASN A . n A 1 32 TYR 32 50 50 TYR TYR A . n A 1 33 ASN 33 51 51 ASN ASN A . n A 1 34 THR 34 52 52 THR THR A . n A 1 35 ASN 35 53 53 ASN ASN A . n A 1 36 ILE 36 54 54 ILE ILE A . n A 1 37 THR 37 55 55 THR THR A . n A 1 38 ASP 38 56 56 ASP ASP A . n A 1 39 GLU 39 57 57 GLU GLU A . n A 1 40 ASN 40 58 58 ASN ASN A . n A 1 41 LEU 41 59 59 LEU LEU A . n A 1 42 GLN 42 60 60 GLN GLN A . n A 1 43 LYS 43 61 61 LYS LYS A . n A 1 44 MET 44 62 62 MET MET A . n A 1 45 ASN 45 63 63 ASN ASN A . n A 1 46 ASN 46 64 64 ASN ASN A . n A 1 47 ALA 47 65 65 ALA ALA A . n A 1 48 GLY 48 66 66 GLY GLY A . n A 1 49 ALA 49 67 67 ALA ALA A . n A 1 50 LYS 50 68 68 LYS LYS A . n A 1 51 TRP 51 69 69 TRP TRP A . n A 1 52 SER 52 70 70 SER SER A . n A 1 53 ALA 53 71 71 ALA ALA A . n A 1 54 PHE 54 72 72 PHE PHE A . n A 1 55 TYR 55 73 73 TYR TYR A . n A 1 56 GLU 56 74 74 GLU GLU A . n A 1 57 GLU 57 75 75 GLU GLU A . n A 1 58 GLN 58 76 76 GLN GLN A . n A 1 59 SER 59 77 77 SER SER A . n A 1 60 LYS 60 78 78 LYS LYS A . n A 1 61 LEU 61 79 79 LEU LEU A . n A 1 62 ALA 62 80 80 ALA ALA A . n A 1 63 LYS 63 81 81 LYS LYS A . n A 1 64 THR 64 82 82 THR THR A . n A 1 65 TYR 65 83 83 TYR TYR A . n A 1 66 PRO 66 84 84 PRO PRO A . n A 1 67 LEU 67 85 85 LEU LEU A . n A 1 68 GLU 68 86 86 GLU GLU A . n A 1 69 GLU 69 87 87 GLU GLU A . n A 1 70 ILE 70 88 88 ILE ILE A . n A 1 71 GLN 71 89 89 GLN GLN A . n A 1 72 ASP 72 90 90 ASP ASP A . n A 1 73 SER 73 91 91 SER SER A . n A 1 74 THR 74 92 92 THR THR A . n A 1 75 VAL 75 93 93 VAL VAL A . n A 1 76 LYS 76 94 94 LYS LYS A . n A 1 77 ARG 77 95 95 ARG ARG A . n A 1 78 GLN 78 96 96 GLN GLN A . n A 1 79 LEU 79 97 97 LEU LEU A . n A 1 80 ARG 80 98 98 ARG ARG A . n A 1 81 ALA 81 99 99 ALA ALA A . n A 1 82 LEU 82 100 100 LEU LEU A . n A 1 83 GLN 83 101 101 GLN GLN A . n A 1 84 HIS 84 102 102 HIS HIS A . n A 1 85 SER 85 103 103 SER SER A . n A 1 86 GLY 86 104 104 GLY GLY A . n A 1 87 SER 87 105 105 SER SER A . n A 1 88 SER 88 106 106 SER SER A . n A 1 89 VAL 89 107 107 VAL VAL A . n A 1 90 LEU 90 108 108 LEU LEU A . n A 1 91 SER 91 109 109 SER SER A . n A 1 92 ALA 92 110 110 ALA ALA A . n A 1 93 ASP 93 111 111 ASP ASP A . n A 1 94 LYS 94 112 112 LYS LYS A . n A 1 95 ASN 95 113 113 ASN ASN A . n A 1 96 GLN 96 114 114 GLN GLN A . n A 1 97 ARG 97 115 115 ARG ARG A . n A 1 98 LEU 98 116 116 LEU LEU A . n A 1 99 ASN 99 117 117 ASN ASN A . n A 1 100 THR 100 118 118 THR THR A . n A 1 101 ILE 101 119 119 ILE ILE A . n A 1 102 LEU 102 120 120 LEU LEU A . n A 1 103 ASN 103 121 121 ASN ASN A . n A 1 104 SER 104 122 122 SER SER A . n A 1 105 MET 105 123 123 MET MET A . n A 1 106 SER 106 124 124 SER SER A . n A 1 107 THR 107 125 125 THR THR A . n A 1 108 ILE 108 126 126 ILE ILE A . n A 1 109 TYR 109 127 127 TYR TYR A . n A 1 110 SER 110 128 128 SER SER A . n A 1 111 THR 111 129 129 THR THR A . n A 1 112 GLY 112 130 130 GLY GLY A . n A 1 113 LYS 113 131 131 LYS LYS A . n A 1 114 ALA 114 132 132 ALA ALA A . n A 1 115 CYS 115 133 133 CYS CYS A . n A 1 116 ASN 116 134 ? ? ? A . n A 1 117 PRO 117 135 ? ? ? A . n A 1 118 SER 118 136 ? ? ? A . n A 1 119 ASN 119 137 ? ? ? A . n A 1 120 PRO 120 138 ? ? ? A . n A 1 121 GLN 121 139 ? ? ? A . n A 1 122 GLU 122 140 ? ? ? A . n A 1 123 CYS 123 141 ? ? ? A . n A 1 124 LEU 124 142 142 LEU LEU A . n A 1 125 LEU 125 143 143 LEU LEU A . n A 1 126 LEU 126 144 144 LEU LEU A . n A 1 127 GLU 127 145 145 GLU GLU A . n A 1 128 PRO 128 146 146 PRO PRO A . n A 1 129 GLY 129 147 147 GLY GLY A . n A 1 130 LEU 130 148 148 LEU LEU A . n A 1 131 ASP 131 149 149 ASP ASP A . n A 1 132 ASP 132 150 150 ASP ASP A . n A 1 133 ILE 133 151 151 ILE ILE A . n A 1 134 MET 134 152 152 MET MET A . n A 1 135 GLU 135 153 153 GLU GLU A . n A 1 136 ASN 136 154 154 ASN ASN A . n A 1 137 SER 137 155 155 SER SER A . n A 1 138 LYS 138 156 156 LYS LYS A . n A 1 139 ASP 139 157 157 ASP ASP A . n A 1 140 TYR 140 158 158 TYR TYR A . n A 1 141 ASN 141 159 159 ASN ASN A . n A 1 142 GLU 142 160 160 GLU GLU A . n A 1 143 ARG 143 161 161 ARG ARG A . n A 1 144 LEU 144 162 162 LEU LEU A . n A 1 145 TRP 145 163 163 TRP TRP A . n A 1 146 ALA 146 164 164 ALA ALA A . n A 1 147 TRP 147 165 165 TRP TRP A . n A 1 148 GLU 148 166 166 GLU GLU A . n A 1 149 GLY 149 167 167 GLY GLY A . n A 1 150 TRP 150 168 168 TRP TRP A . n A 1 151 ARG 151 169 169 ARG ARG A . n A 1 152 SER 152 170 170 SER SER A . n A 1 153 GLU 153 171 171 GLU GLU A . n A 1 154 VAL 154 172 172 VAL VAL A . n A 1 155 GLY 155 173 173 GLY GLY A . n A 1 156 LYS 156 174 174 LYS LYS A . n A 1 157 GLN 157 175 175 GLN GLN A . n A 1 158 LEU 158 176 176 LEU LEU A . n A 1 159 ARG 159 177 177 ARG ARG A . n A 1 160 PRO 160 178 178 PRO PRO A . n A 1 161 LEU 161 179 179 LEU LEU A . n A 1 162 TYR 162 180 180 TYR TYR A . n A 1 163 GLU 163 181 181 GLU GLU A . n A 1 164 GLU 164 182 182 GLU GLU A . n A 1 165 TYR 165 183 183 TYR TYR A . n A 1 166 VAL 166 184 184 VAL VAL A . n A 1 167 ALA 167 185 185 ALA ALA A . n A 1 168 LEU 168 186 186 LEU LEU A . n A 1 169 LYS 169 187 187 LYS LYS A . n A 1 170 ASN 170 188 188 ASN ASN A . n A 1 171 GLU 171 189 189 GLU GLU A . n A 1 172 MET 172 190 190 MET MET A . n A 1 173 ALA 173 191 191 ALA ALA A . n A 1 174 ARG 174 192 192 ARG ARG A . n A 1 175 ALA 175 193 193 ALA ALA A . n A 1 176 ASN 176 194 194 ASN ASN A . n A 1 177 ASN 177 195 195 ASN ASN A . n A 1 178 TYR 178 196 196 TYR TYR A . n A 1 179 GLU 179 197 197 GLU GLU A . n A 1 180 ASP 180 198 198 ASP ASP A . n A 1 181 TYR 181 199 199 TYR TYR A . n A 1 182 GLY 182 200 200 GLY GLY A . n A 1 183 ASP 183 201 201 ASP ASP A . n A 1 184 TYR 184 202 202 TYR TYR A . n A 1 185 TRP 185 203 203 TRP TRP A . n A 1 186 ARG 186 204 204 ARG ARG A . n A 1 187 GLY 187 205 205 GLY GLY A . n A 1 188 ASP 188 206 206 ASP ASP A . n A 1 189 TYR 189 207 207 TYR TYR A . n A 1 190 GLU 190 208 208 GLU GLU A . n A 1 191 GLU 191 209 209 GLU GLU A . n A 1 192 GLU 192 210 210 GLU GLU A . n A 1 193 TRP 193 211 211 TRP TRP A . n A 1 194 GLU 194 212 212 GLU GLU A . n A 1 195 ASN 195 213 213 ASN ASN A . n A 1 196 GLY 196 214 214 GLY GLY A . n A 1 197 TYR 197 215 215 TYR TYR A . n A 1 198 ASN 198 216 216 ASN ASN A . n A 1 199 TYR 199 217 217 TYR TYR A . n A 1 200 SER 200 218 218 SER SER A . n A 1 201 ARG 201 219 219 ARG ARG A . n A 1 202 ASN 202 220 220 ASN ASN A . n A 1 203 GLN 203 221 221 GLN GLN A . n A 1 204 LEU 204 222 222 LEU LEU A . n A 1 205 ILE 205 223 223 ILE ILE A . n A 1 206 ASP 206 224 224 ASP ASP A . n A 1 207 ASP 207 225 225 ASP ASP A . n A 1 208 VAL 208 226 226 VAL VAL A . n A 1 209 GLU 209 227 227 GLU GLU A . n A 1 210 HIS 210 228 228 HIS HIS A . n A 1 211 THR 211 229 229 THR THR A . n A 1 212 PHE 212 230 230 PHE PHE A . n A 1 213 THR 213 231 231 THR THR A . n A 1 214 GLN 214 232 232 GLN GLN A . n A 1 215 ILE 215 233 233 ILE ILE A . n A 1 216 MET 216 234 234 MET MET A . n A 1 217 PRO 217 235 235 PRO PRO A . n A 1 218 LEU 218 236 236 LEU LEU A . n A 1 219 TYR 219 237 237 TYR TYR A . n A 1 220 GLN 220 238 238 GLN GLN A . n A 1 221 HIS 221 239 239 HIS HIS A . n A 1 222 LEU 222 240 240 LEU LEU A . n A 1 223 HIS 223 241 241 HIS HIS A . n A 1 224 ALA 224 242 242 ALA ALA A . n A 1 225 TYR 225 243 243 TYR TYR A . n A 1 226 VAL 226 244 244 VAL VAL A . n A 1 227 ARG 227 245 245 ARG ARG A . n A 1 228 THR 228 246 246 THR THR A . n A 1 229 LYS 229 247 247 LYS LYS A . n A 1 230 LEU 230 248 248 LEU LEU A . n A 1 231 MET 231 249 249 MET MET A . n A 1 232 ASP 232 250 250 ASP ASP A . n A 1 233 THR 233 251 251 THR THR A . n A 1 234 TYR 234 252 252 TYR TYR A . n A 1 235 PRO 235 253 253 PRO PRO A . n A 1 236 SER 236 254 254 SER SER A . n A 1 237 TYR 237 255 255 TYR TYR A . n A 1 238 ILE 238 256 256 ILE ILE A . n A 1 239 SER 239 257 257 SER SER A . n A 1 240 PRO 240 258 258 PRO PRO A . n A 1 241 THR 241 259 259 THR THR A . n A 1 242 GLY 242 260 260 GLY GLY A . n A 1 243 CYS 243 261 261 CYS CYS A . n A 1 244 LEU 244 262 262 LEU LEU A . n A 1 245 PRO 245 263 263 PRO PRO A . n A 1 246 ALA 246 264 264 ALA ALA A . n A 1 247 HIS 247 265 265 HIS HIS A . n A 1 248 LEU 248 266 266 LEU LEU A . n A 1 249 LEU 249 267 267 LEU LEU A . n A 1 250 GLY 250 268 268 GLY GLY A . n A 1 251 ASP 251 269 269 ASP ASP A . n A 1 252 MET 252 270 270 MET MET A . n A 1 253 TRP 253 271 271 TRP TRP A . n A 1 254 GLY 254 272 272 GLY GLY A . n A 1 255 ARG 255 273 273 ARG ARG A . n A 1 256 PHE 256 274 274 PHE PHE A . n A 1 257 TRP 257 275 275 TRP TRP A . n A 1 258 THR 258 276 276 THR THR A . n A 1 259 ASN 259 277 277 ASN ASN A . n A 1 260 LEU 260 278 278 LEU LEU A . n A 1 261 TYR 261 279 279 TYR TYR A . n A 1 262 PRO 262 280 280 PRO PRO A . n A 1 263 LEU 263 281 281 LEU LEU A . n A 1 264 THR 264 282 282 THR THR A . n A 1 265 VAL 265 283 283 VAL VAL A . n A 1 266 PRO 266 284 284 PRO PRO A . n A 1 267 PHE 267 285 285 PHE PHE A . n A 1 268 GLY 268 286 286 GLY GLY A . n A 1 269 GLN 269 287 287 GLN GLN A . n A 1 270 LYS 270 288 288 LYS LYS A . n A 1 271 PRO 271 289 289 PRO PRO A . n A 1 272 ASN 272 290 290 ASN ASN A . n A 1 273 ILE 273 291 291 ILE ILE A . n A 1 274 ASP 274 292 292 ASP ASP A . n A 1 275 VAL 275 293 293 VAL VAL A . n A 1 276 THR 276 294 294 THR THR A . n A 1 277 ASN 277 295 295 ASN ASN A . n A 1 278 ALA 278 296 296 ALA ALA A . n A 1 279 MET 279 297 297 MET MET A . n A 1 280 VAL 280 298 298 VAL VAL A . n A 1 281 ASN 281 299 299 ASN ASN A . n A 1 282 GLN 282 300 300 GLN GLN A . n A 1 283 SER 283 301 301 SER SER A . n A 1 284 TRP 284 302 302 TRP TRP A . n A 1 285 ASP 285 303 303 ASP ASP A . n A 1 286 ALA 286 304 304 ALA ALA A . n A 1 287 ARG 287 305 305 ARG ARG A . n A 1 288 LYS 288 306 306 LYS LYS A . n A 1 289 ILE 289 307 307 ILE ILE A . n A 1 290 PHE 290 308 308 PHE PHE A . n A 1 291 LYS 291 309 309 LYS LYS A . n A 1 292 GLU 292 310 310 GLU GLU A . n A 1 293 ALA 293 311 311 ALA ALA A . n A 1 294 GLU 294 312 312 GLU GLU A . n A 1 295 LYS 295 313 313 LYS LYS A . n A 1 296 PHE 296 314 314 PHE PHE A . n A 1 297 PHE 297 315 315 PHE PHE A . n A 1 298 VAL 298 316 316 VAL VAL A . n A 1 299 SER 299 317 317 SER SER A . n A 1 300 VAL 300 318 318 VAL VAL A . n A 1 301 GLY 301 319 319 GLY GLY A . n A 1 302 LEU 302 320 320 LEU LEU A . n A 1 303 PRO 303 321 321 PRO PRO A . n A 1 304 ASN 304 322 322 ASN ASN A . n A 1 305 MET 305 323 323 MET MET A . n A 1 306 THR 306 324 324 THR THR A . n A 1 307 GLN 307 325 325 GLN GLN A . n A 1 308 GLY 308 326 326 GLY GLY A . n A 1 309 PHE 309 327 327 PHE PHE A . n A 1 310 TRP 310 328 328 TRP TRP A . n A 1 311 GLU 311 329 329 GLU GLU A . n A 1 312 ASN 312 330 330 ASN ASN A . n A 1 313 SER 313 331 331 SER SER A . n A 1 314 MET 314 332 332 MET MET A . n A 1 315 LEU 315 333 333 LEU LEU A . n A 1 316 THR 316 334 334 THR THR A . n A 1 317 GLU 317 335 335 GLU GLU A . n A 1 318 PRO 318 336 336 PRO PRO A . n A 1 319 SER 319 337 337 SER SER A . n A 1 320 ASP 320 338 338 ASP ASP A . n A 1 321 SER 321 339 339 SER SER A . n A 1 322 TRP 322 340 340 TRP TRP A . n A 1 323 LYS 323 341 341 LYS LYS A . n A 1 324 VAL 324 342 342 VAL VAL A . n A 1 325 VAL 325 343 343 VAL VAL A . n A 1 326 CYS 326 344 344 CYS CYS A . n A 1 327 HIS 327 345 345 HIS HIS A . n A 1 328 PRO 328 346 346 PRO PRO A . n A 1 329 THR 329 347 347 THR THR A . n A 1 330 ALA 330 348 348 ALA ALA A . n A 1 331 TRP 331 349 349 TRP TRP A . n A 1 332 ASP 332 350 350 ASP ASP A . n A 1 333 LEU 333 351 351 LEU LEU A . n A 1 334 GLY 334 352 352 GLY GLY A . n A 1 335 ARG 335 353 353 ARG ARG A . n A 1 336 GLY 336 354 354 GLY GLY A . n A 1 337 ASP 337 355 355 ASP ASP A . n A 1 338 PHE 338 356 356 PHE PHE A . n A 1 339 ARG 339 357 357 ARG ARG A . n A 1 340 ILE 340 358 358 ILE ILE A . n A 1 341 LYS 341 359 359 LYS LYS A . n A 1 342 MET 342 360 360 MET MET A . n A 1 343 CYS 343 361 361 CYS CYS A . n A 1 344 THR 344 362 362 THR THR A . n A 1 345 LYS 345 363 363 LYS LYS A . n A 1 346 VAL 346 364 364 VAL VAL A . n A 1 347 THR 347 365 365 THR THR A . n A 1 348 MET 348 366 366 MET MET A . n A 1 349 ASP 349 367 367 ASP ASP A . n A 1 350 ASP 350 368 368 ASP ASP A . n A 1 351 PHE 351 369 369 PHE PHE A . n A 1 352 LEU 352 370 370 LEU LEU A . n A 1 353 THR 353 371 371 THR THR A . n A 1 354 ALA 354 372 372 ALA ALA A . n A 1 355 HIS 355 373 373 HIS HIS A . n A 1 356 HIS 356 374 374 HIS HIS A . n A 1 357 GLU 357 375 375 GLU GLU A . n A 1 358 MET 358 376 376 MET MET A . n A 1 359 GLY 359 377 377 GLY GLY A . n A 1 360 HIS 360 378 378 HIS HIS A . n A 1 361 ILE 361 379 379 ILE ILE A . n A 1 362 GLN 362 380 380 GLN GLN A . n A 1 363 TYR 363 381 381 TYR TYR A . n A 1 364 ASP 364 382 382 ASP ASP A . n A 1 365 MET 365 383 383 MET MET A . n A 1 366 ALA 366 384 384 ALA ALA A . n A 1 367 TYR 367 385 385 TYR TYR A . n A 1 368 ALA 368 386 386 ALA ALA A . n A 1 369 ALA 369 387 387 ALA ALA A . n A 1 370 GLN 370 388 388 GLN GLN A . n A 1 371 PRO 371 389 389 PRO PRO A . n A 1 372 PHE 372 390 390 PHE PHE A . n A 1 373 LEU 373 391 391 LEU LEU A . n A 1 374 LEU 374 392 392 LEU LEU A . n A 1 375 ARG 375 393 393 ARG ARG A . n A 1 376 ASN 376 394 394 ASN ASN A . n A 1 377 GLY 377 395 395 GLY GLY A . n A 1 378 ALA 378 396 396 ALA ALA A . n A 1 379 ASN 379 397 397 ASN ASN A . n A 1 380 GLU 380 398 398 GLU GLU A . n A 1 381 GLY 381 399 399 GLY GLY A . n A 1 382 PHE 382 400 400 PHE PHE A . n A 1 383 HIS 383 401 401 HIS HIS A . n A 1 384 GLU 384 402 402 GLU GLU A . n A 1 385 ALA 385 403 403 ALA ALA A . n A 1 386 VAL 386 404 404 VAL VAL A . n A 1 387 GLY 387 405 405 GLY GLY A . n A 1 388 GLU 388 406 406 GLU GLU A . n A 1 389 ILE 389 407 407 ILE ILE A . n A 1 390 MET 390 408 408 MET MET A . n A 1 391 SER 391 409 409 SER SER A . n A 1 392 LEU 392 410 410 LEU LEU A . n A 1 393 SER 393 411 411 SER SER A . n A 1 394 ALA 394 412 412 ALA ALA A . n A 1 395 ALA 395 413 413 ALA ALA A . n A 1 396 THR 396 414 414 THR THR A . n A 1 397 PRO 397 415 415 PRO PRO A . n A 1 398 ASN 398 416 416 ASN ASN A . n A 1 399 HIS 399 417 417 HIS HIS A . n A 1 400 LEU 400 418 418 LEU LEU A . n A 1 401 LYS 401 419 419 LYS LYS A . n A 1 402 ASN 402 420 420 ASN ASN A . n A 1 403 ILE 403 421 421 ILE ILE A . n A 1 404 GLY 404 422 422 GLY GLY A . n A 1 405 LEU 405 423 423 LEU LEU A . n A 1 406 LEU 406 424 424 LEU LEU A . n A 1 407 PRO 407 425 425 PRO PRO A . n A 1 408 PRO 408 426 426 PRO PRO A . n A 1 409 SER 409 427 427 SER SER A . n A 1 410 PHE 410 428 428 PHE PHE A . n A 1 411 PHE 411 429 429 PHE PHE A . n A 1 412 GLU 412 430 430 GLU GLU A . n A 1 413 ASP 413 431 431 ASP ASP A . n A 1 414 SER 414 432 432 SER SER A . n A 1 415 GLU 415 433 433 GLU GLU A . n A 1 416 THR 416 434 434 THR THR A . n A 1 417 GLU 417 435 435 GLU GLU A . n A 1 418 ILE 418 436 436 ILE ILE A . n A 1 419 ASN 419 437 437 ASN ASN A . n A 1 420 PHE 420 438 438 PHE PHE A . n A 1 421 LEU 421 439 439 LEU LEU A . n A 1 422 LEU 422 440 440 LEU LEU A . n A 1 423 LYS 423 441 441 LYS LYS A . n A 1 424 GLN 424 442 442 GLN GLN A . n A 1 425 ALA 425 443 443 ALA ALA A . n A 1 426 LEU 426 444 444 LEU LEU A . n A 1 427 THR 427 445 445 THR THR A . n A 1 428 ILE 428 446 446 ILE ILE A . n A 1 429 VAL 429 447 447 VAL VAL A . n A 1 430 GLY 430 448 448 GLY GLY A . n A 1 431 THR 431 449 449 THR THR A . n A 1 432 LEU 432 450 450 LEU LEU A . n A 1 433 PRO 433 451 451 PRO PRO A . n A 1 434 PHE 434 452 452 PHE PHE A . n A 1 435 THR 435 453 453 THR THR A . n A 1 436 TYR 436 454 454 TYR TYR A . n A 1 437 MET 437 455 455 MET MET A . n A 1 438 LEU 438 456 456 LEU LEU A . n A 1 439 GLU 439 457 457 GLU GLU A . n A 1 440 LYS 440 458 458 LYS LYS A . n A 1 441 TRP 441 459 459 TRP TRP A . n A 1 442 ARG 442 460 460 ARG ARG A . n A 1 443 TRP 443 461 461 TRP TRP A . n A 1 444 MET 444 462 462 MET MET A . n A 1 445 VAL 445 463 463 VAL VAL A . n A 1 446 PHE 446 464 464 PHE PHE A . n A 1 447 LYS 447 465 465 LYS LYS A . n A 1 448 GLY 448 466 466 GLY GLY A . n A 1 449 GLU 449 467 467 GLU GLU A . n A 1 450 ILE 450 468 468 ILE ILE A . n A 1 451 PRO 451 469 469 PRO PRO A . n A 1 452 LYS 452 470 470 LYS LYS A . n A 1 453 ASP 453 471 471 ASP ASP A . n A 1 454 GLN 454 472 472 GLN GLN A . n A 1 455 TRP 455 473 473 TRP TRP A . n A 1 456 MET 456 474 474 MET MET A . n A 1 457 LYS 457 475 475 LYS LYS A . n A 1 458 THR 458 476 476 THR THR A . n A 1 459 TRP 459 477 477 TRP TRP A . n A 1 460 TRP 460 478 478 TRP TRP A . n A 1 461 GLU 461 479 479 GLU GLU A . n A 1 462 MET 462 480 480 MET MET A . n A 1 463 LYS 463 481 481 LYS LYS A . n A 1 464 ARG 464 482 482 ARG ARG A . n A 1 465 ASN 465 483 483 ASN ASN A . n A 1 466 ILE 466 484 484 ILE ILE A . n A 1 467 VAL 467 485 485 VAL VAL A . n A 1 468 GLY 468 486 486 GLY GLY A . n A 1 469 VAL 469 487 487 VAL VAL A . n A 1 470 VAL 470 488 488 VAL VAL A . n A 1 471 GLU 471 489 489 GLU GLU A . n A 1 472 PRO 472 490 490 PRO PRO A . n A 1 473 VAL 473 491 491 VAL VAL A . n A 1 474 PRO 474 492 492 PRO PRO A . n A 1 475 HIS 475 493 493 HIS HIS A . n A 1 476 ASP 476 494 494 ASP ASP A . n A 1 477 GLU 477 495 495 GLU GLU A . n A 1 478 THR 478 496 496 THR THR A . n A 1 479 TYR 479 497 497 TYR TYR A . n A 1 480 CYS 480 498 498 CYS CYS A . n A 1 481 ASP 481 499 499 ASP ASP A . n A 1 482 PRO 482 500 500 PRO PRO A . n A 1 483 ALA 483 501 501 ALA ALA A . n A 1 484 SER 484 502 502 SER SER A . n A 1 485 LEU 485 503 503 LEU LEU A . n A 1 486 PHE 486 504 504 PHE PHE A . n A 1 487 HIS 487 505 505 HIS HIS A . n A 1 488 VAL 488 506 506 VAL VAL A . n A 1 489 ALA 489 507 507 ALA ALA A . n A 1 490 ASN 490 508 508 ASN ASN A . n A 1 491 ASP 491 509 509 ASP ASP A . n A 1 492 TYR 492 510 510 TYR TYR A . n A 1 493 SER 493 511 511 SER SER A . n A 1 494 PHE 494 512 512 PHE PHE A . n A 1 495 ILE 495 513 513 ILE ILE A . n A 1 496 ARG 496 514 514 ARG ARG A . n A 1 497 TYR 497 515 515 TYR TYR A . n A 1 498 TYR 498 516 516 TYR TYR A . n A 1 499 THR 499 517 517 THR THR A . n A 1 500 ARG 500 518 518 ARG ARG A . n A 1 501 THR 501 519 519 THR THR A . n A 1 502 ILE 502 520 520 ILE ILE A . n A 1 503 TYR 503 521 521 TYR TYR A . n A 1 504 GLN 504 522 522 GLN GLN A . n A 1 505 PHE 505 523 523 PHE PHE A . n A 1 506 GLN 506 524 524 GLN GLN A . n A 1 507 PHE 507 525 525 PHE PHE A . n A 1 508 GLN 508 526 526 GLN GLN A . n A 1 509 GLU 509 527 527 GLU GLU A . n A 1 510 ALA 510 528 528 ALA ALA A . n A 1 511 LEU 511 529 529 LEU LEU A . n A 1 512 CYS 512 530 530 CYS CYS A . n A 1 513 GLN 513 531 531 GLN GLN A . n A 1 514 ILE 514 532 532 ILE ILE A . n A 1 515 ALA 515 533 533 ALA ALA A . n A 1 516 LYS 516 534 534 LYS LYS A . n A 1 517 HIS 517 535 535 HIS HIS A . n A 1 518 GLU 518 536 536 GLU GLU A . n A 1 519 GLY 519 537 537 GLY GLY A . n A 1 520 PRO 520 538 538 PRO PRO A . n A 1 521 LEU 521 539 539 LEU LEU A . n A 1 522 HIS 522 540 540 HIS HIS A . n A 1 523 LYS 523 541 541 LYS LYS A . n A 1 524 CYS 524 542 542 CYS CYS A . n A 1 525 ASP 525 543 543 ASP ASP A . n A 1 526 ILE 526 544 544 ILE ILE A . n A 1 527 SER 527 545 545 SER SER A . n A 1 528 ASN 528 546 546 ASN ASN A . n A 1 529 SER 529 547 547 SER SER A . n A 1 530 SER 530 548 548 SER SER A . n A 1 531 GLU 531 549 549 GLU GLU A . n A 1 532 ALA 532 550 550 ALA ALA A . n A 1 533 GLY 533 551 551 GLY GLY A . n A 1 534 GLN 534 552 552 GLN GLN A . n A 1 535 LYS 535 553 553 LYS LYS A . n A 1 536 LEU 536 554 554 LEU LEU A . n A 1 537 LEU 537 555 555 LEU LEU A . n A 1 538 GLU 538 556 556 GLU GLU A . n A 1 539 MET 539 557 557 MET MET A . n A 1 540 LEU 540 558 558 LEU LEU A . n A 1 541 LYS 541 559 559 LYS LYS A . n A 1 542 LEU 542 560 560 LEU LEU A . n A 1 543 GLY 543 561 561 GLY GLY A . n A 1 544 LYS 544 562 562 LYS LYS A . n A 1 545 SER 545 563 563 SER SER A . n A 1 546 LYS 546 564 564 LYS LYS A . n A 1 547 PRO 547 565 565 PRO PRO A . n A 1 548 TRP 548 566 566 TRP TRP A . n A 1 549 THR 549 567 567 THR THR A . n A 1 550 TYR 550 568 568 TYR TYR A . n A 1 551 ALA 551 569 569 ALA ALA A . n A 1 552 LEU 552 570 570 LEU LEU A . n A 1 553 GLU 553 571 571 GLU GLU A . n A 1 554 ILE 554 572 572 ILE ILE A . n A 1 555 VAL 555 573 573 VAL VAL A . n A 1 556 VAL 556 574 574 VAL VAL A . n A 1 557 GLY 557 575 575 GLY GLY A . n A 1 558 ALA 558 576 576 ALA ALA A . n A 1 559 LYS 559 577 577 LYS LYS A . n A 1 560 ASN 560 578 578 ASN ASN A . n A 1 561 MET 561 579 579 MET MET A . n A 1 562 ASP 562 580 580 ASP ASP A . n A 1 563 VAL 563 581 581 VAL VAL A . n A 1 564 ARG 564 582 582 ARG ARG A . n A 1 565 PRO 565 583 583 PRO PRO A . n A 1 566 LEU 566 584 584 LEU LEU A . n A 1 567 LEU 567 585 585 LEU LEU A . n A 1 568 ASN 568 586 586 ASN ASN A . n A 1 569 TYR 569 587 587 TYR TYR A . n A 1 570 PHE 570 588 588 PHE PHE A . n A 1 571 GLU 571 589 589 GLU GLU A . n A 1 572 PRO 572 590 590 PRO PRO A . n A 1 573 LEU 573 591 591 LEU LEU A . n A 1 574 PHE 574 592 592 PHE PHE A . n A 1 575 THR 575 593 593 THR THR A . n A 1 576 TRP 576 594 594 TRP TRP A . n A 1 577 LEU 577 595 595 LEU LEU A . n A 1 578 LYS 578 596 596 LYS LYS A . n A 1 579 GLU 579 597 597 GLU GLU A . n A 1 580 GLN 580 598 598 GLN GLN A . n A 1 581 ASN 581 599 599 ASN ASN A . n A 1 582 ARG 582 600 600 ARG ARG A . n A 1 583 ASN 583 601 601 ASN ASN A . n A 1 584 SER 584 602 602 SER SER A . n A 1 585 PHE 585 603 603 PHE PHE A . n A 1 586 VAL 586 604 604 VAL VAL A . n A 1 587 GLY 587 605 605 GLY GLY A . n A 1 588 TRP 588 606 606 TRP TRP A . n A 1 589 ASN 589 607 607 ASN ASN A . n A 1 590 THR 590 608 608 THR THR A . n A 1 591 ASP 591 609 609 ASP ASP A . n A 1 592 TRP 592 610 610 TRP TRP A . n A 1 593 SER 593 611 611 SER SER A . n A 1 594 PRO 594 612 612 PRO PRO A . n A 1 595 TYR 595 613 613 TYR TYR A . n A 1 596 ALA 596 614 614 ALA ALA A . n A 1 597 ASP 597 615 615 ASP ASP A . n A 1 598 GLN 598 616 ? ? ? A . n A 1 599 SER 599 617 ? ? ? A . n A 1 600 HIS 600 618 ? ? ? A . n A 1 601 HIS 601 619 ? ? ? A . n A 1 602 HIS 602 620 ? ? ? A . n A 1 603 HIS 603 621 ? ? ? A . n A 1 604 HIS 604 622 ? ? ? A . n A 1 605 HIS 605 623 ? ? ? A . n B 2 1 ARG 1 319 ? ? ? B . n B 2 2 VAL 2 320 ? ? ? B . n B 2 3 GLN 3 321 ? ? ? B . n B 2 4 PRO 4 322 ? ? ? B . n B 2 5 THR 5 323 ? ? ? B . n B 2 6 GLU 6 324 ? ? ? B . n B 2 7 SER 7 325 ? ? ? B . n B 2 8 ILE 8 326 ? ? ? B . n B 2 9 VAL 9 327 ? ? ? B . n B 2 10 ARG 10 328 ? ? ? B . n B 2 11 PHE 11 329 ? ? ? B . n B 2 12 PRO 12 330 ? ? ? B . n B 2 13 ASN 13 331 ? ? ? B . n B 2 14 ILE 14 332 ? ? ? B . n B 2 15 THR 15 333 ? ? ? B . n B 2 16 ASN 16 334 ? ? ? B . n B 2 17 LEU 17 335 335 LEU LEU B . n B 2 18 CYS 18 336 336 CYS CYS B . n B 2 19 PRO 19 337 337 PRO PRO B . n B 2 20 PHE 20 338 338 PHE PHE B . n B 2 21 GLY 21 339 339 GLY GLY B . n B 2 22 GLU 22 340 340 GLU GLU B . n B 2 23 VAL 23 341 341 VAL VAL B . n B 2 24 PHE 24 342 342 PHE PHE B . n B 2 25 ASN 25 343 343 ASN ASN B . n B 2 26 ALA 26 344 344 ALA ALA B . n B 2 27 THR 27 345 345 THR THR B . n B 2 28 ARG 28 346 346 ARG ARG B . n B 2 29 PHE 29 347 347 PHE PHE B . n B 2 30 ALA 30 348 348 ALA ALA B . n B 2 31 SER 31 349 349 SER SER B . n B 2 32 VAL 32 350 350 VAL VAL B . n B 2 33 TYR 33 351 351 TYR TYR B . n B 2 34 ALA 34 352 352 ALA ALA B . n B 2 35 TRP 35 353 353 TRP TRP B . n B 2 36 ASN 36 354 354 ASN ASN B . n B 2 37 ARG 37 355 355 ARG ARG B . n B 2 38 LYS 38 356 356 LYS LYS B . n B 2 39 ARG 39 357 357 ARG ARG B . n B 2 40 ILE 40 358 358 ILE ILE B . n B 2 41 SER 41 359 359 SER SER B . n B 2 42 ASN 42 360 360 ASN ASN B . n B 2 43 CYS 43 361 361 CYS CYS B . n B 2 44 VAL 44 362 362 VAL VAL B . n B 2 45 ALA 45 363 363 ALA ALA B . n B 2 46 ASP 46 364 364 ASP ASP B . n B 2 47 TYR 47 365 365 TYR TYR B . n B 2 48 SER 48 366 366 SER SER B . n B 2 49 VAL 49 367 367 VAL VAL B . n B 2 50 LEU 50 368 368 LEU LEU B . n B 2 51 TYR 51 369 369 TYR TYR B . n B 2 52 ASN 52 370 370 ASN ASN B . n B 2 53 SER 53 371 371 SER SER B . n B 2 54 ALA 54 372 372 ALA ALA B . n B 2 55 SER 55 373 373 SER SER B . n B 2 56 PHE 56 374 374 PHE PHE B . n B 2 57 SER 57 375 375 SER SER B . n B 2 58 THR 58 376 376 THR THR B . n B 2 59 PHE 59 377 377 PHE PHE B . n B 2 60 LYS 60 378 378 LYS LYS B . n B 2 61 CYS 61 379 379 CYS CYS B . n B 2 62 TYR 62 380 380 TYR TYR B . n B 2 63 GLY 63 381 381 GLY GLY B . n B 2 64 VAL 64 382 382 VAL VAL B . n B 2 65 SER 65 383 383 SER SER B . n B 2 66 PRO 66 384 384 PRO PRO B . n B 2 67 THR 67 385 385 THR THR B . n B 2 68 LYS 68 386 386 LYS LYS B . n B 2 69 LEU 69 387 387 LEU LEU B . n B 2 70 ASN 70 388 388 ASN ASN B . n B 2 71 ASP 71 389 389 ASP ASP B . n B 2 72 LEU 72 390 390 LEU LEU B . n B 2 73 CYS 73 391 391 CYS CYS B . n B 2 74 PHE 74 392 392 PHE PHE B . n B 2 75 THR 75 393 393 THR THR B . n B 2 76 ASN 76 394 394 ASN ASN B . n B 2 77 VAL 77 395 395 VAL VAL B . n B 2 78 TYR 78 396 396 TYR TYR B . n B 2 79 ALA 79 397 397 ALA ALA B . n B 2 80 ASP 80 398 398 ASP ASP B . n B 2 81 SER 81 399 399 SER SER B . n B 2 82 PHE 82 400 400 PHE PHE B . n B 2 83 VAL 83 401 401 VAL VAL B . n B 2 84 ILE 84 402 402 ILE ILE B . n B 2 85 ARG 85 403 403 ARG ARG B . n B 2 86 GLY 86 404 404 GLY GLY B . n B 2 87 ASP 87 405 405 ASP ASP B . n B 2 88 GLU 88 406 406 GLU GLU B . n B 2 89 VAL 89 407 407 VAL VAL B . n B 2 90 ARG 90 408 408 ARG ARG B . n B 2 91 GLN 91 409 409 GLN GLN B . n B 2 92 ILE 92 410 410 ILE ILE B . n B 2 93 ALA 93 411 411 ALA ALA B . n B 2 94 PRO 94 412 412 PRO PRO B . n B 2 95 GLY 95 413 413 GLY GLY B . n B 2 96 GLN 96 414 414 GLN GLN B . n B 2 97 THR 97 415 415 THR THR B . n B 2 98 GLY 98 416 416 GLY GLY B . n B 2 99 LYS 99 417 417 LYS LYS B . n B 2 100 ILE 100 418 418 ILE ILE B . n B 2 101 ALA 101 419 419 ALA ALA B . n B 2 102 ASP 102 420 420 ASP ASP B . n B 2 103 TYR 103 421 421 TYR TYR B . n B 2 104 ASN 104 422 422 ASN ASN B . n B 2 105 TYR 105 423 423 TYR TYR B . n B 2 106 LYS 106 424 424 LYS LYS B . n B 2 107 LEU 107 425 425 LEU LEU B . n B 2 108 PRO 108 426 426 PRO PRO B . n B 2 109 ASP 109 427 427 ASP ASP B . n B 2 110 ASP 110 428 428 ASP ASP B . n B 2 111 PHE 111 429 429 PHE PHE B . n B 2 112 THR 112 430 430 THR THR B . n B 2 113 GLY 113 431 431 GLY GLY B . n B 2 114 CYS 114 432 432 CYS CYS B . n B 2 115 VAL 115 433 433 VAL VAL B . n B 2 116 ILE 116 434 434 ILE ILE B . n B 2 117 ALA 117 435 435 ALA ALA B . n B 2 118 TRP 118 436 436 TRP TRP B . n B 2 119 ASN 119 437 437 ASN ASN B . n B 2 120 SER 120 438 438 SER SER B . n B 2 121 ASN 121 439 439 ASN ASN B . n B 2 122 ASN 122 440 440 ASN ASN B . n B 2 123 LEU 123 441 441 LEU LEU B . n B 2 124 ASP 124 442 442 ASP ASP B . n B 2 125 SER 125 443 443 SER SER B . n B 2 126 LYS 126 444 444 LYS LYS B . n B 2 127 VAL 127 445 445 VAL VAL B . n B 2 128 GLY 128 446 446 GLY GLY B . n B 2 129 GLY 129 447 447 GLY GLY B . n B 2 130 ASN 130 448 448 ASN ASN B . n B 2 131 TYR 131 449 449 TYR TYR B . n B 2 132 ASN 132 450 450 ASN ASN B . n B 2 133 TYR 133 451 451 TYR TYR B . n B 2 134 LEU 134 452 452 LEU LEU B . n B 2 135 TYR 135 453 453 TYR TYR B . n B 2 136 ARG 136 454 454 ARG ARG B . n B 2 137 LEU 137 455 455 LEU LEU B . n B 2 138 PHE 138 456 456 PHE PHE B . n B 2 139 ARG 139 457 457 ARG ARG B . n B 2 140 LYS 140 458 458 LYS LYS B . n B 2 141 SER 141 459 459 SER SER B . n B 2 142 ASN 142 460 460 ASN ASN B . n B 2 143 LEU 143 461 461 LEU LEU B . n B 2 144 LYS 144 462 462 LYS LYS B . n B 2 145 PRO 145 463 463 PRO PRO B . n B 2 146 PHE 146 464 464 PHE PHE B . n B 2 147 GLU 147 465 465 GLU GLU B . n B 2 148 ARG 148 466 466 ARG ARG B . n B 2 149 ASP 149 467 467 ASP ASP B . n B 2 150 ILE 150 468 468 ILE ILE B . n B 2 151 SER 151 469 469 SER SER B . n B 2 152 THR 152 470 470 THR THR B . n B 2 153 GLU 153 471 471 GLU GLU B . n B 2 154 ILE 154 472 472 ILE ILE B . n B 2 155 TYR 155 473 473 TYR TYR B . n B 2 156 GLN 156 474 474 GLN GLN B . n B 2 157 ALA 157 475 475 ALA ALA B . n B 2 158 GLY 158 476 476 GLY GLY B . n B 2 159 SER 159 477 477 SER SER B . n B 2 160 THR 160 478 478 THR THR B . n B 2 161 PRO 161 479 479 PRO PRO B . n B 2 162 CYS 162 480 480 CYS CYS B . n B 2 163 ASN 163 481 481 ASN ASN B . n B 2 164 GLY 164 482 482 GLY GLY B . n B 2 165 VAL 165 483 483 VAL VAL B . n B 2 166 GLU 166 484 484 GLU GLU B . n B 2 167 GLY 167 485 485 GLY GLY B . n B 2 168 PHE 168 486 486 PHE PHE B . n B 2 169 ASN 169 487 487 ASN ASN B . n B 2 170 CYS 170 488 488 CYS CYS B . n B 2 171 TYR 171 489 489 TYR TYR B . n B 2 172 PHE 172 490 490 PHE PHE B . n B 2 173 PRO 173 491 491 PRO PRO B . n B 2 174 LEU 174 492 492 LEU LEU B . n B 2 175 GLN 175 493 493 GLN GLN B . n B 2 176 SER 176 494 494 SER SER B . n B 2 177 TYR 177 495 495 TYR TYR B . n B 2 178 GLY 178 496 496 GLY GLY B . n B 2 179 PHE 179 497 497 PHE PHE B . n B 2 180 GLN 180 498 498 GLN GLN B . n B 2 181 PRO 181 499 499 PRO PRO B . n B 2 182 THR 182 500 500 THR THR B . n B 2 183 TYR 183 501 501 TYR TYR B . n B 2 184 GLY 184 502 502 GLY GLY B . n B 2 185 VAL 185 503 503 VAL VAL B . n B 2 186 GLY 186 504 504 GLY GLY B . n B 2 187 TYR 187 505 505 TYR TYR B . n B 2 188 GLN 188 506 506 GLN GLN B . n B 2 189 PRO 189 507 507 PRO PRO B . n B 2 190 TYR 190 508 508 TYR TYR B . n B 2 191 ARG 191 509 509 ARG ARG B . n B 2 192 VAL 192 510 510 VAL VAL B . n B 2 193 VAL 193 511 511 VAL VAL B . n B 2 194 VAL 194 512 512 VAL VAL B . n B 2 195 LEU 195 513 513 LEU LEU B . n B 2 196 SER 196 514 514 SER SER B . n B 2 197 PHE 197 515 515 PHE PHE B . n B 2 198 GLU 198 516 516 GLU GLU B . n B 2 199 LEU 199 517 517 LEU LEU B . n B 2 200 LEU 200 518 518 LEU LEU B . n B 2 201 HIS 201 519 519 HIS HIS B . n B 2 202 ALA 202 520 520 ALA ALA B . n B 2 203 PRO 203 521 521 PRO PRO B . n B 2 204 ALA 204 522 522 ALA ALA B . n B 2 205 THR 205 523 523 THR THR B . n B 2 206 VAL 206 524 524 VAL VAL B . n B 2 207 CYS 207 525 525 CYS CYS B . n B 2 208 GLY 208 526 526 GLY GLY B . n B 2 209 PRO 209 527 527 PRO PRO B . n B 2 210 LYS 210 528 528 LYS LYS B . n B 2 211 LYS 211 529 ? ? ? B . n B 2 212 SER 212 530 ? ? ? B . n B 2 213 THR 213 531 ? ? ? B . n B 2 214 ASN 214 532 ? ? ? B . n B 2 215 LEU 215 533 ? ? ? B . n B 2 216 VAL 216 534 ? ? ? B . n B 2 217 LYS 217 535 ? ? ? B . n B 2 218 ASN 218 536 ? ? ? B . n B 2 219 LYS 219 537 ? ? ? B . n B 2 220 CYS 220 538 ? ? ? B . n B 2 221 VAL 221 539 ? ? ? B . n B 2 222 ASN 222 540 ? ? ? B . n B 2 223 PHE 223 541 ? ? ? B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 A NAG 696 n C 3 NAG 2 C NAG 2 A NAG 697 n D 3 NAG 1 D NAG 1 A NAG 698 n D 3 NAG 2 D NAG 2 A NAG 703 n E 3 NAG 1 E NAG 1 A NAG 699 n E 3 NAG 2 E NAG 2 A NAG 700 n F 3 NAG 1 F NAG 1 B NAG 702 n F 3 NAG 2 F NAG 2 B NAG 703 n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? 2 ZN ? ? ZN ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 ZN 1 701 701 ZN ZN A . H 5 NAG 1 702 702 NAG NAG A . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8YFT _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YFT _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YFT _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 8YFT _struct.title 'Cryo-EM structure of SARS-CoV-2 alpha variant spike protein in complex with raccoon dog ACE2 (local refinement)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YFT _struct_keywords.text 'SARS-CoV-2, alpha, RBD, raccoon dog, ACE2, VIRAL PROTEIN-HYDROLASE Complex' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN/HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP B4XEP4_NYCPR B4XEP4 ? 1 ;QSTEDLVNTFLEKFNYEAEELSYQSSLASWNYNTNITDENLQKMNNAGAKWSAFYEEQSKLAKTYPLEEIQDSTVKRQLR ALQHSGSSVLSADKNQRLNTILNSMSTIYSTGKACNPSNPQECLLLEPGLDDIMENSKDYNERLWAWEGWRSEVGKQLRP LYEEYVALKNEMARANNYEDYGDYWRGDYEEEWENGYNYSRNQLIDDVEHTFTQIMPLYQHLHAYVRTKLMDTYPSYISP TGCLPAHLLGDMWGRFWTNLYPLTVPFGQKPNIDVTNAMVNQSWDARKIFKEAEKFFVSVGLPNMTQGFWENSMLTEPSD SWKVVCHPTAWDLGRGDFRIKMCTKVTMDDFLTAHHEMGHIQYDMAYAAQPFLLRNGANEGFHEAVGEIMSLSAATPNHL KNIGLLPPSFFEDSETEINFLLKQALTIVGTLPFTYMLEKWRWMVFKGEIPKDQWMKTWWEMKRNIVGVVEPVPHDETYC DPASLFHVANDYSFIRYYTRTIYQFQFQEALCQIAKHEGPLHKCDISNSSEAGQKLLEMLKLGKSKPWTYALEIVVGAKN MDVRPLLNYFEPLFTWLKEQNRNSFVGWNTDWSPYADQS ; 18 2 UNP SPIKE_SARS2 P0DTC2 ? 2 ;RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYAD SFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGST PCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNF ; 319 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8YFT A 1 ? 599 ? B4XEP4 18 ? 616 ? 19 617 2 2 8YFT B 1 ? 223 ? P0DTC2 319 ? 541 ? 319 541 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8YFT HIS A 600 ? UNP B4XEP4 ? ? 'expression tag' 618 1 1 8YFT HIS A 601 ? UNP B4XEP4 ? ? 'expression tag' 619 2 1 8YFT HIS A 602 ? UNP B4XEP4 ? ? 'expression tag' 620 3 1 8YFT HIS A 603 ? UNP B4XEP4 ? ? 'expression tag' 621 4 1 8YFT HIS A 604 ? UNP B4XEP4 ? ? 'expression tag' 622 5 1 8YFT HIS A 605 ? UNP B4XEP4 ? ? 'expression tag' 623 6 2 8YFT TYR B 183 ? UNP P0DTC2 ASN 501 variant 501 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 2 ? ILE A 36 ? SER A 20 ILE A 54 1 ? 35 HELX_P HELX_P2 AA2 GLU A 39 ? ALA A 62 ? GLU A 57 ALA A 80 1 ? 24 HELX_P HELX_P3 AA3 LYS A 63 ? TYR A 65 ? LYS A 81 TYR A 83 5 ? 3 HELX_P HELX_P4 AA4 ASP A 72 ? SER A 85 ? ASP A 90 SER A 103 1 ? 14 HELX_P HELX_P5 AA5 SER A 91 ? THR A 111 ? SER A 109 THR A 129 1 ? 21 HELX_P HELX_P6 AA6 GLY A 129 ? ASN A 136 ? GLY A 147 ASN A 154 1 ? 8 HELX_P HELX_P7 AA7 ASP A 139 ? ASN A 176 ? ASP A 157 ASN A 194 1 ? 38 HELX_P HELX_P8 AA8 ASP A 180 ? ARG A 186 ? ASP A 198 ARG A 204 1 ? 7 HELX_P HELX_P9 AA9 GLY A 187 ? TYR A 189 ? GLY A 205 TYR A 207 5 ? 3 HELX_P HELX_P10 AB1 SER A 200 ? PHE A 212 ? SER A 218 PHE A 230 1 ? 13 HELX_P HELX_P11 AB2 ILE A 215 ? LEU A 230 ? ILE A 233 LEU A 248 1 ? 16 HELX_P HELX_P12 AB3 HIS A 247 ? LEU A 249 ? HIS A 265 LEU A 267 5 ? 3 HELX_P HELX_P13 AB4 TRP A 257 ? TYR A 261 ? TRP A 275 TYR A 279 5 ? 5 HELX_P HELX_P14 AB5 VAL A 275 ? SER A 283 ? VAL A 293 SER A 301 1 ? 9 HELX_P HELX_P15 AB6 ASP A 285 ? VAL A 300 ? ASP A 303 VAL A 318 1 ? 16 HELX_P HELX_P16 AB7 THR A 306 ? SER A 313 ? THR A 324 SER A 331 1 ? 8 HELX_P HELX_P17 AB8 MET A 348 ? TYR A 367 ? MET A 366 TYR A 385 1 ? 20 HELX_P HELX_P18 AB9 PRO A 371 ? ARG A 375 ? PRO A 389 ARG A 393 5 ? 5 HELX_P HELX_P19 AC1 GLY A 381 ? ALA A 394 ? GLY A 399 ALA A 412 1 ? 14 HELX_P HELX_P20 AC2 THR A 396 ? GLY A 404 ? THR A 414 GLY A 422 1 ? 9 HELX_P HELX_P21 AC3 ASP A 413 ? VAL A 429 ? ASP A 431 VAL A 447 1 ? 17 HELX_P HELX_P22 AC4 THR A 431 ? GLY A 448 ? THR A 449 GLY A 466 1 ? 18 HELX_P HELX_P23 AC5 PRO A 451 ? ASP A 453 ? PRO A 469 ASP A 471 5 ? 3 HELX_P HELX_P24 AC6 GLN A 454 ? ILE A 466 ? GLN A 472 ILE A 484 1 ? 13 HELX_P HELX_P25 AC7 ASP A 481 ? SER A 484 ? ASP A 499 SER A 502 5 ? 4 HELX_P HELX_P26 AC8 LEU A 485 ? ASN A 490 ? LEU A 503 ASN A 508 1 ? 6 HELX_P HELX_P27 AC9 ILE A 495 ? LYS A 516 ? ILE A 513 LYS A 534 1 ? 22 HELX_P HELX_P28 AD1 PRO A 520 ? CYS A 524 ? PRO A 538 CYS A 542 5 ? 5 HELX_P HELX_P29 AD2 GLU A 531 ? LYS A 541 ? GLU A 549 LYS A 559 1 ? 11 HELX_P HELX_P30 AD3 PRO A 547 ? VAL A 556 ? PRO A 565 VAL A 574 1 ? 10 HELX_P HELX_P31 AD4 VAL A 563 ? PHE A 570 ? VAL A 581 PHE A 588 1 ? 8 HELX_P HELX_P32 AD5 PHE A 570 ? ASN A 581 ? PHE A 588 ASN A 599 1 ? 12 HELX_P HELX_P33 AD6 PRO B 19 ? ASN B 25 ? PRO B 337 ASN B 343 1 ? 7 HELX_P HELX_P34 AD7 TYR B 47 ? ASN B 52 ? TYR B 365 ASN B 370 1 ? 6 HELX_P HELX_P35 AD8 SER B 65 ? LEU B 69 ? SER B 383 LEU B 387 5 ? 5 HELX_P HELX_P36 AD9 GLU B 88 ? ILE B 92 ? GLU B 406 ILE B 410 5 ? 5 HELX_P HELX_P37 AE1 LYS B 99 ? ASN B 104 ? LYS B 417 ASN B 422 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 326 SG ? ? ? 1_555 A CYS 343 SG ? ? A CYS 344 A CYS 361 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf2 disulf ? ? A CYS 512 SG ? ? ? 1_555 A CYS 524 SG ? ? A CYS 530 A CYS 542 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? B CYS 18 SG ? ? ? 1_555 B CYS 43 SG ? ? B CYS 336 B CYS 361 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf4 disulf ? ? B CYS 61 SG ? ? ? 1_555 B CYS 114 SG ? ? B CYS 379 B CYS 432 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf5 disulf ? ? B CYS 73 SG ? ? ? 1_555 B CYS 207 SG ? ? B CYS 391 B CYS 525 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf6 disulf ? ? B CYS 162 SG ? ? ? 1_555 B CYS 170 SG ? ? B CYS 480 B CYS 488 1_555 ? ? ? ? ? ? ? 2.057 ? ? covale1 covale one ? A ASN 35 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 53 A NAG 702 1_555 ? ? ? ? ? ? ? 1.465 ? N-Glycosylation covale2 covale one ? A ASN 198 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 216 C NAG 1 1_555 ? ? ? ? ? ? ? 1.436 ? N-Glycosylation covale3 covale one ? A ASN 281 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 299 E NAG 1 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale4 covale one ? A ASN 304 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 322 D NAG 1 1_555 ? ? ? ? ? ? ? 1.457 ? N-Glycosylation covale5 covale one ? B ASN 25 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 343 F NAG 1 1_555 ? ? ? ? ? ? ? 1.428 ? N-Glycosylation covale6 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale7 covale both ? D NAG . O4 ? ? ? 1_555 D NAG . C1 ? ? D NAG 1 D NAG 2 1_555 ? ? ? ? ? ? ? 1.393 ? ? covale8 covale both ? E NAG . O4 ? ? ? 1_555 E NAG . C1 ? ? E NAG 1 E NAG 2 1_555 ? ? ? ? ? ? ? 1.392 ? ? covale9 covale both ? F NAG . O4 ? ? ? 1_555 F NAG . C1 ? ? F NAG 1 F NAG 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? metalc1 metalc ? ? A HIS 356 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 374 A ZN 701 1_555 ? ? ? ? ? ? ? 2.297 ? ? metalc2 metalc ? ? A HIS 360 NE2 ? ? ? 1_555 G ZN . ZN ? ? A HIS 378 A ZN 701 1_555 ? ? ? ? ? ? ? 2.344 ? ? metalc3 metalc ? ? A GLU 384 OE1 ? ? ? 1_555 G ZN . ZN ? ? A GLU 402 A ZN 701 1_555 ? ? ? ? ? ? ? 2.317 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 356 ? A HIS 374 ? 1_555 ZN ? G ZN . ? A ZN 701 ? 1_555 NE2 ? A HIS 360 ? A HIS 378 ? 1_555 104.9 ? 2 NE2 ? A HIS 356 ? A HIS 374 ? 1_555 ZN ? G ZN . ? A ZN 701 ? 1_555 OE1 ? A GLU 384 ? A GLU 402 ? 1_555 123.0 ? 3 NE2 ? A HIS 360 ? A HIS 378 ? 1_555 ZN ? G ZN . ? A ZN 701 ? 1_555 OE1 ? A GLU 384 ? A GLU 402 ? 1_555 80.6 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG C . ? ASN A 198 ? NAG C 1 ? 1_555 ASN A 216 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 NAG D . ? ASN A 304 ? NAG D 1 ? 1_555 ASN A 322 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 3 NAG E . ? ASN A 281 ? NAG E 1 ? 1_555 ASN A 299 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 4 NAG F . ? ASN B 25 ? NAG F 1 ? 1_555 ASN B 343 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 5 NAG H . ? ASN A 35 ? NAG A 702 ? 1_555 ASN A 53 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 6 CYS A 326 ? CYS A 343 ? CYS A 344 ? 1_555 CYS A 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS A 512 ? CYS A 524 ? CYS A 530 ? 1_555 CYS A 542 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 18 ? CYS B 43 ? CYS B 336 ? 1_555 CYS B 361 ? 1_555 SG SG . . . None 'Disulfide bridge' 9 CYS B 61 ? CYS B 114 ? CYS B 379 ? 1_555 CYS B 432 ? 1_555 SG SG . . . None 'Disulfide bridge' 10 CYS B 73 ? CYS B 207 ? CYS B 391 ? 1_555 CYS B 525 ? 1_555 SG SG . . . None 'Disulfide bridge' 11 CYS B 162 ? CYS B 170 ? CYS B 480 ? 1_555 CYS B 488 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? AA3 ? 5 ? AA4 ? 2 ? AA5 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 244 ? PRO A 245 ? LEU A 262 PRO A 263 AA1 2 VAL A 469 ? VAL A 470 ? VAL A 487 VAL A 488 AA2 1 THR A 329 ? ASP A 332 ? THR A 347 ASP A 350 AA2 2 PHE A 338 ? LYS A 341 ? PHE A 356 LYS A 359 AA3 1 ASN B 36 ? SER B 41 ? ASN B 354 SER B 359 AA3 2 ASN B 76 ? ILE B 84 ? ASN B 394 ILE B 402 AA3 3 TYR B 190 ? GLU B 198 ? TYR B 508 GLU B 516 AA3 4 GLY B 113 ? ASN B 119 ? GLY B 431 ASN B 437 AA3 5 CYS B 61 ? TYR B 62 ? CYS B 379 TYR B 380 AA4 1 LEU B 134 ? ARG B 136 ? LEU B 452 ARG B 454 AA4 2 LEU B 174 ? SER B 176 ? LEU B 492 SER B 494 AA5 1 TYR B 155 ? GLN B 156 ? TYR B 473 GLN B 474 AA5 2 CYS B 170 ? TYR B 171 ? CYS B 488 TYR B 489 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LEU A 244 ? N LEU A 262 O VAL A 470 ? O VAL A 488 AA2 1 2 N THR A 329 ? N THR A 347 O LYS A 341 ? O LYS A 359 AA3 1 2 N ILE B 40 ? N ILE B 358 O VAL B 77 ? O VAL B 395 AA3 2 3 N PHE B 82 ? N PHE B 400 O VAL B 192 ? O VAL B 510 AA3 3 4 O VAL B 193 ? O VAL B 511 N ILE B 116 ? N ILE B 434 AA3 4 5 O GLY B 113 ? O GLY B 431 N TYR B 62 ? N TYR B 380 AA4 1 2 N TYR B 135 ? N TYR B 453 O GLN B 175 ? O GLN B 493 AA5 1 2 N TYR B 155 ? N TYR B 473 O TYR B 171 ? O TYR B 489 # _pdbx_entry_details.entry_id 8YFT _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ILE A 54 ? ? 53.40 101.87 2 1 ASN A 194 ? ? -95.60 31.18 3 1 ARG A 204 ? ? -65.83 0.44 4 1 GLU A 212 ? ? -68.36 -176.04 5 1 THR A 229 ? ? -67.49 0.16 6 1 ASN A 322 ? ? -104.74 -161.23 7 1 ASP A 338 ? ? -96.05 30.39 8 1 ILE A 484 ? ? -105.37 -61.10 9 1 VAL A 573 ? ? -93.11 -61.73 10 1 ASN A 601 ? ? -97.68 57.15 11 1 THR A 608 ? ? -90.89 54.30 12 1 ASN B 343 ? ? -98.88 38.48 13 1 ALA B 352 ? ? -93.95 55.65 14 1 ALA B 372 ? ? 58.91 19.40 15 1 ARG B 403 ? ? -79.98 -168.91 16 1 GLU B 484 ? ? -80.46 -149.37 17 1 ASN B 487 ? ? 28.69 26.53 18 1 THR B 500 ? ? -99.74 35.49 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8YFT _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8YFT _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.16 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 306176 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'SARS-CoV-2 alpha spike in complex with raccoon dog ACE2' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8YFT _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 1000 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8YFT _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8YFT _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 134 ? A ASN 116 2 1 Y 1 A PRO 135 ? A PRO 117 3 1 Y 1 A SER 136 ? A SER 118 4 1 Y 1 A ASN 137 ? A ASN 119 5 1 Y 1 A PRO 138 ? A PRO 120 6 1 Y 1 A GLN 139 ? A GLN 121 7 1 Y 1 A GLU 140 ? A GLU 122 8 1 Y 1 A CYS 141 ? A CYS 123 9 1 Y 1 A GLN 616 ? A GLN 598 10 1 Y 1 A SER 617 ? A SER 599 11 1 Y 1 A HIS 618 ? A HIS 600 12 1 Y 1 A HIS 619 ? A HIS 601 13 1 Y 1 A HIS 620 ? A HIS 602 14 1 Y 1 A HIS 621 ? A HIS 603 15 1 Y 1 A HIS 622 ? A HIS 604 16 1 Y 1 A HIS 623 ? A HIS 605 17 1 Y 1 B ARG 319 ? B ARG 1 18 1 Y 1 B VAL 320 ? B VAL 2 19 1 Y 1 B GLN 321 ? B GLN 3 20 1 Y 1 B PRO 322 ? B PRO 4 21 1 Y 1 B THR 323 ? B THR 5 22 1 Y 1 B GLU 324 ? B GLU 6 23 1 Y 1 B SER 325 ? B SER 7 24 1 Y 1 B ILE 326 ? B ILE 8 25 1 Y 1 B VAL 327 ? B VAL 9 26 1 Y 1 B ARG 328 ? B ARG 10 27 1 Y 1 B PHE 329 ? B PHE 11 28 1 Y 1 B PRO 330 ? B PRO 12 29 1 Y 1 B ASN 331 ? B ASN 13 30 1 Y 1 B ILE 332 ? B ILE 14 31 1 Y 1 B THR 333 ? B THR 15 32 1 Y 1 B ASN 334 ? B ASN 16 33 1 Y 1 B LYS 529 ? B LYS 211 34 1 Y 1 B SER 530 ? B SER 212 35 1 Y 1 B THR 531 ? B THR 213 36 1 Y 1 B ASN 532 ? B ASN 214 37 1 Y 1 B LEU 533 ? B LEU 215 38 1 Y 1 B VAL 534 ? B VAL 216 39 1 Y 1 B LYS 535 ? B LYS 217 40 1 Y 1 B ASN 536 ? B ASN 218 41 1 Y 1 B LYS 537 ? B LYS 219 42 1 Y 1 B CYS 538 ? B CYS 220 43 1 Y 1 B VAL 539 ? B VAL 221 44 1 Y 1 B ASN 540 ? B ASN 222 45 1 Y 1 B PHE 541 ? B PHE 223 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 VAL N N N N 399 VAL CA C N S 400 VAL C C N N 401 VAL O O N N 402 VAL CB C N N 403 VAL CG1 C N N 404 VAL CG2 C N N 405 VAL OXT O N N 406 VAL H H N N 407 VAL H2 H N N 408 VAL HA H N N 409 VAL HB H N N 410 VAL HG11 H N N 411 VAL HG12 H N N 412 VAL HG13 H N N 413 VAL HG21 H N N 414 VAL HG22 H N N 415 VAL HG23 H N N 416 VAL HXT H N N 417 ZN ZN ZN N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _em_admin.current_status REL _em_admin.deposition_date 2024-02-25 _em_admin.deposition_site PDBJ _em_admin.entry_id 8YFT _em_admin.last_update 2024-10-23 _em_admin.map_release_date 2024-10-23 _em_admin.title 'Cryo-EM structure of SARS-CoV-2 alpha variant spike protein in complex with raccoon dog ACE2 (local refinement)' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 2697049 _em_entity_assembly_naturalsource.organism 'Severe acute respiratory syndrome coronavirus 2' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'MODEL REFINEMENT' ? 1 ? ? ? PHENIX 1.20.1_4487: 'IMAGE ACQUISITION' ? 2 1 ? 1 ? ? 'PARTICLE SELECTION' ? 3 1 1 1 ? ? 'VOLUME SELECTION' ? 4 1 1 1 ? ? CLASSIFICATION ? 5 1 1 1 ? ? MASKING ? 6 1 1 1 ? ? RECONSTRUCTION ? 7 1 1 1 ? ? 'INITIAL EULER ASSIGNMENT' ? 8 1 1 1 ? ? 'FINAL EULER ASSIGNMENT' ? 9 1 1 1 ? ? 'CTF CORRECTION' ? 10 1 1 1 ? ? 'LAYERLINE INDEXING' ? 11 1 1 1 ? ? 'DIFFRACTION INDEXING' ? 12 1 1 1 ? ? 'MODEL FITTING' ? 13 1 1 1 ? ? 'SERIES ALIGNMENT' ? 14 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 15 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 16 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 17 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 18 1 1 1 ? ? OTHER ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Natural Science Foundation of China (NSFC)' _pdbx_audit_support.country China _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 NAG 2 n # _atom_sites.entry_id 8YFT _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S ZN # loop_