HEADER SUGAR BINDING PROTEIN 01-MAR-24 8YJ9 TITLE CRYSTALLIZATION STUDIES OF CONCANAVALIN A IN-COMPLEX WITH D-ARABINOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN-BR; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CON BR SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA ENSIFORMIS; SOURCE 3 ORGANISM_COMMON: JACK BEAN; SOURCE 4 ORGANISM_TAXID: 3823 KEYWDS D-ARABINOSE, PLANT LECTIN, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.RASHEED,R.ARIF REVDAT 1 05-MAR-25 8YJ9 0 JRNL AUTH S.RASHEED,R.ARIF JRNL TITL CRYSTALLIZATION STUDIES OF CONCANAVALIN A IN-COMPLEX WITH JRNL TITL 2 D-ARABINOSE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0411 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.90 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 11789 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 647 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 848 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2030 REMARK 3 BIN FREE R VALUE SET COUNT : 39 REMARK 3 BIN FREE R VALUE : 0.2350 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.09000 REMARK 3 B22 (A**2) : -0.65000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.268 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.138 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.490 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1883 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 1716 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2562 ; 1.329 ; 1.640 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3968 ; 0.471 ; 1.573 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 236 ; 8.099 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 6 ; 6.672 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 289 ;13.776 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 298 ; 0.063 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2159 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 413 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 947 ; 1.342 ; 1.411 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 947 ; 1.340 ; 1.412 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1182 ; 2.299 ; 2.531 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1183 ; 2.299 ; 2.532 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 936 ; 1.807 ; 1.651 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 929 ; 1.769 ; 1.615 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1369 ; 2.858 ; 2.856 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2096 ; 5.178 ;17.460 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2078 ; 5.074 ;17.200 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8YJ9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1300045557. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-NOV-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5-5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER D8 QUEST REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5406 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : BRUKER PHOTON II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12438 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 21.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.19000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.50100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION SOLUTION WAS COMPRISED REMARK 280 OF SODIUM ACETATE (100 MM, PH=5), PEG6000 (5%), AND AMMONIUN REMARK 280 SULPHATE (2M) IN HANGING DROP VAPOR DIFFUSION SETUP., PH 5.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 30.94100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.31350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 44.34000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 30.94100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.31350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 44.34000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 30.94100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 43.31350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 44.34000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 30.94100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 43.31350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 44.34000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 427 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 21 39.55 -83.38 REMARK 500 ASN A 104 66.42 -119.83 REMARK 500 HIS A 121 62.18 61.54 REMARK 500 ASP A 136 79.41 -114.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 306 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 98.9 REMARK 620 3 ASP A 19 OD1 164.8 95.3 REMARK 620 4 HIS A 24 NE2 93.2 91.6 91.7 REMARK 620 5 HOH A 426 O 85.2 89.7 89.6 178.1 REMARK 620 6 HOH A 448 O 83.0 177.5 82.6 89.9 88.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD1 REMARK 620 2 ASP A 10 OD2 55.2 REMARK 620 3 TYR A 12 O 73.3 111.7 REMARK 620 4 ASN A 14 OD1 145.3 159.4 81.4 REMARK 620 5 ASP A 19 OD2 109.5 76.5 82.8 90.1 REMARK 620 6 HOH A 454 O 70.5 108.1 90.9 86.8 173.3 REMARK 620 7 HOH A 462 O 111.4 74.0 174.3 92.9 98.2 87.8 REMARK 620 N 1 2 3 4 5 6 DBREF 8YJ9 A 1 237 UNP P55915 CONA_CANBR 1 237 SEQADV 8YJ9 ASP A 58 UNP P55915 GLY 58 CONFLICT SEQADV 8YJ9 ALA A 70 UNP P55915 GLY 70 CONFLICT SEQADV 8YJ9 ASP A 151 UNP P55915 GLU 151 CONFLICT SEQADV 8YJ9 GLU A 155 UNP P55915 ARG 155 CONFLICT SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL ASP LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN ALA ASP SER ALA THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR ASP GLY ASN LEU GLU LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN HET GOL A 301 6 HET GOL A 302 6 HET GOL A 303 6 HET ROR A 304 10 HET CA A 305 1 HET MN A 306 1 HET SO4 A 307 5 HET SO4 A 308 5 HETNAM GOL GLYCEROL HETNAM ROR L-RIBOSE HETNAM CA CALCIUM ION HETNAM MN MANGANESE (II) ION HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 ROR C5 H10 O5 FORMUL 6 CA CA 2+ FORMUL 7 MN MN 2+ FORMUL 8 SO4 2(O4 S 2-) FORMUL 10 HOH *120(H2 O) HELIX 1 AA1 ASN A 14 GLY A 18 5 5 HELIX 2 AA2 ASP A 80 VAL A 84 5 5 HELIX 3 AA3 THR A 150 GLY A 152 5 3 HELIX 4 AA4 THR A 226 LEU A 230 5 5 SHEET 1 AA1 7 LYS A 36 LYS A 39 0 SHEET 2 AA1 7 HIS A 24 ILE A 29 -1 N ILE A 25 O ALA A 38 SHEET 3 AA1 7 ILE A 4 ASP A 10 -1 N ALA A 6 O ASP A 28 SHEET 4 AA1 7 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 AA1 7 TRP A 88 SER A 96 -1 N GLY A 92 O PHE A 213 SHEET 6 AA1 7 VAL A 170 PHE A 175 -1 O ALA A 173 N LEU A 93 SHEET 7 AA1 7 LEU A 140 GLY A 144 -1 N ILE A 141 O LEU A 174 SHEET 1 AA2 6 LYS A 36 LYS A 39 0 SHEET 2 AA2 6 HIS A 24 ILE A 29 -1 N ILE A 25 O ALA A 38 SHEET 3 AA2 6 ILE A 4 ASP A 10 -1 N ALA A 6 O ASP A 28 SHEET 4 AA2 6 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 AA2 6 TRP A 88 SER A 96 -1 N GLY A 92 O PHE A 213 SHEET 6 AA2 6 VAL A 179 HIS A 180 -1 O VAL A 179 N VAL A 89 SHEET 1 AA3 6 ALA A 73 ASP A 78 0 SHEET 2 AA3 6 ARG A 60 SER A 66 -1 N VAL A 65 O ALA A 73 SHEET 3 AA3 6 VAL A 47 ASN A 55 -1 N HIS A 51 O VAL A 64 SHEET 4 AA3 6 ALA A 186 LEU A 198 -1 O ALA A 193 N ILE A 52 SHEET 5 AA3 6 THR A 105 SER A 117 -1 N LYS A 116 O VAL A 187 SHEET 6 AA3 6 THR A 123 PHE A 130 -1 O ASN A 124 N LEU A 115 SHEET 1 AA4 7 ALA A 73 ASP A 78 0 SHEET 2 AA4 7 ARG A 60 SER A 66 -1 N VAL A 65 O ALA A 73 SHEET 3 AA4 7 VAL A 47 ASN A 55 -1 N HIS A 51 O VAL A 64 SHEET 4 AA4 7 ALA A 186 LEU A 198 -1 O ALA A 193 N ILE A 52 SHEET 5 AA4 7 THR A 105 SER A 117 -1 N LYS A 116 O VAL A 187 SHEET 6 AA4 7 LEU A 154 GLU A 155 -1 O LEU A 154 N ILE A 106 SHEET 7 AA4 7 THR A 147 THR A 148 -1 N THR A 147 O GLU A 155 LINK OE2 GLU A 8 MN MN A 306 1555 1555 2.18 LINK OD1 ASP A 10 CA CA A 305 1555 1555 2.39 LINK OD2 ASP A 10 CA CA A 305 1555 1555 2.39 LINK OD2 ASP A 10 MN MN A 306 1555 1555 2.12 LINK O TYR A 12 CA CA A 305 1555 1555 2.38 LINK OD1 ASN A 14 CA CA A 305 1555 1555 2.44 LINK OD2 ASP A 19 CA CA A 305 1555 1555 2.36 LINK OD1 ASP A 19 MN MN A 306 1555 1555 2.20 LINK NE2 HIS A 24 MN MN A 306 1555 1555 2.22 LINK CA CA A 305 O HOH A 454 1555 1555 2.29 LINK CA CA A 305 O HOH A 462 1555 1555 2.43 LINK MN MN A 306 O HOH A 426 1555 1555 2.37 LINK MN MN A 306 O HOH A 448 1555 1555 2.12 CISPEP 1 ALA A 207 ASP A 208 0 3.76 CRYST1 61.882 86.627 88.680 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016160 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011544 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011276 0.00000 TER 1810 ASN A 237 HETATM 1811 C1 GOL A 301 8.343 21.892 25.692 1.00 18.93 C HETATM 1812 O1 GOL A 301 8.819 23.230 25.793 1.00 16.24 O HETATM 1813 C2 GOL A 301 9.444 20.863 25.829 1.00 19.15 C HETATM 1814 O2 GOL A 301 8.961 19.741 26.562 1.00 25.79 O HETATM 1815 C3 GOL A 301 9.984 20.348 24.515 1.00 18.44 C HETATM 1816 O3 GOL A 301 9.052 20.477 23.449 1.00 16.64 O HETATM 1817 C1 GOL A 302 31.775 36.967 -11.362 1.00 30.78 C HETATM 1818 O1 GOL A 302 31.379 36.934 -9.992 1.00 25.64 O HETATM 1819 C2 GOL A 302 30.613 37.105 -12.327 1.00 34.47 C HETATM 1820 O2 GOL A 302 31.033 37.821 -13.487 1.00 38.60 O HETATM 1821 C3 GOL A 302 29.996 35.798 -12.781 1.00 36.19 C HETATM 1822 O3 GOL A 302 28.822 36.028 -13.567 1.00 35.51 O HETATM 1823 C1 GOL A 303 34.561 26.239 27.900 1.00 30.13 C HETATM 1824 O1 GOL A 303 35.291 26.193 26.669 1.00 22.18 O HETATM 1825 C2 GOL A 303 33.409 27.233 27.931 1.00 32.17 C HETATM 1826 O2 GOL A 303 32.405 26.746 28.817 1.00 32.50 O HETATM 1827 C3 GOL A 303 33.778 28.654 28.337 1.00 34.29 C HETATM 1828 O3 GOL A 303 34.106 28.779 29.722 1.00 36.12 O HETATM 1829 C5 ROR A 304 17.347 38.800 -3.867 1.00 23.88 C HETATM 1830 O5 ROR A 304 16.095 39.449 -3.672 1.00 16.73 O HETATM 1831 C4 ROR A 304 17.494 38.048 -5.181 1.00 25.46 C HETATM 1832 O4 ROR A 304 17.996 36.801 -4.739 1.00 24.85 O HETATM 1833 C3 ROR A 304 18.482 38.672 -6.192 1.00 27.67 C HETATM 1834 O3 ROR A 304 18.801 39.997 -5.754 1.00 32.56 O HETATM 1835 C2 ROR A 304 18.094 38.841 -7.666 1.00 24.25 C HETATM 1836 O2 ROR A 304 16.756 39.315 -7.688 1.00 29.79 O HETATM 1837 C1 ROR A 304 18.219 37.576 -8.524 1.00 24.46 C HETATM 1838 O1 ROR A 304 17.651 37.393 -9.600 1.00 19.83 O HETATM 1839 CA CA A 305 13.652 19.429 20.375 1.00 8.77 CA HETATM 1840 MN MN A 306 15.941 18.441 17.089 1.00 12.44 MN HETATM 1841 S SO4 A 307 17.384 9.366 27.301 1.00 58.51 S HETATM 1842 O1 SO4 A 307 17.600 8.051 26.744 1.00 56.36 O HETATM 1843 O2 SO4 A 307 17.397 10.350 26.249 1.00 62.59 O HETATM 1844 O3 SO4 A 307 16.104 9.402 27.960 1.00 60.05 O HETATM 1845 O4 SO4 A 307 18.433 9.661 28.253 1.00 58.90 O HETATM 1846 S SO4 A 308 9.120 26.681 -8.538 1.00 59.68 S HETATM 1847 O1 SO4 A 308 10.057 25.590 -8.721 1.00 61.71 O HETATM 1848 O2 SO4 A 308 8.552 27.062 -9.808 1.00 66.88 O HETATM 1849 O3 SO4 A 308 8.048 26.275 -7.655 1.00 54.30 O HETATM 1850 O4 SO4 A 308 9.826 27.800 -7.981 1.00 53.23 O HETATM 1851 O HOH A 401 18.694 29.850 -19.089 1.00 19.74 O HETATM 1852 O HOH A 402 20.052 35.858 -5.195 1.00 11.66 O HETATM 1853 O HOH A 403 31.980 24.459 28.957 1.00 24.60 O HETATM 1854 O HOH A 404 16.633 21.834 27.545 1.00 17.25 O HETATM 1855 O HOH A 405 33.572 24.348 -2.456 1.00 16.04 O HETATM 1856 O HOH A 406 33.425 37.735 -13.884 1.00 28.68 O HETATM 1857 O HOH A 407 35.184 27.625 18.729 1.00 27.25 O HETATM 1858 O HOH A 408 12.074 25.875 31.079 1.00 12.73 O HETATM 1859 O HOH A 409 8.507 38.945 21.060 1.00 13.91 O HETATM 1860 O HOH A 410 5.604 42.236 16.207 1.00 27.16 O HETATM 1861 O HOH A 411 2.640 16.500 7.611 1.00 35.57 O HETATM 1862 O HOH A 412 2.911 27.907 28.565 1.00 27.12 O HETATM 1863 O HOH A 413 8.227 17.349 26.859 1.00 21.26 O HETATM 1864 O HOH A 414 30.059 30.100 15.105 1.00 29.21 O HETATM 1865 O HOH A 415 17.118 20.409 -9.953 1.00 15.56 O HETATM 1866 O HOH A 416 5.117 39.371 15.221 1.00 31.44 O HETATM 1867 O HOH A 417 9.148 45.705 13.414 1.00 14.36 O HETATM 1868 O HOH A 418 5.858 21.936 5.978 1.00 19.31 O HETATM 1869 O HOH A 419 3.965 21.607 19.135 1.00 20.02 O HETATM 1870 O HOH A 420 19.649 26.005 31.817 1.00 24.99 O HETATM 1871 O HOH A 421 29.121 34.446 19.660 1.00 9.09 O HETATM 1872 O HOH A 422 5.499 24.059 7.591 1.00 14.04 O HETATM 1873 O HOH A 423 7.016 18.319 4.867 1.00 19.82 O HETATM 1874 O HOH A 424 21.110 24.233 -5.485 1.00 19.95 O HETATM 1875 O HOH A 425 3.706 23.121 21.920 1.00 19.06 O HETATM 1876 O HOH A 426 13.938 18.852 15.895 1.00 9.35 O HETATM 1877 O HOH A 427 30.929 22.311 -0.021 0.50 26.64 O HETATM 1878 O HOH A 428 31.119 31.840 25.988 1.00 20.50 O HETATM 1879 O HOH A 429 10.570 12.311 8.446 1.00 18.18 O HETATM 1880 O HOH A 430 20.904 16.957 -8.081 1.00 17.91 O HETATM 1881 O HOH A 431 9.281 30.214 -7.116 1.00 7.44 O HETATM 1882 O HOH A 432 19.592 20.625 -9.518 1.00 20.14 O HETATM 1883 O HOH A 433 1.492 28.977 5.010 1.00 14.97 O HETATM 1884 O HOH A 434 11.843 14.961 4.500 1.00 18.00 O HETATM 1885 O HOH A 435 26.536 37.730 4.873 1.00 24.39 O HETATM 1886 O HOH A 436 25.319 37.978 12.937 1.00 25.04 O HETATM 1887 O HOH A 437 21.202 44.223 18.768 1.00 14.01 O HETATM 1888 O HOH A 438 23.434 26.834 -9.798 1.00 27.53 O HETATM 1889 O HOH A 439 27.560 23.541 -0.574 1.00 18.83 O HETATM 1890 O HOH A 440 7.838 17.439 10.784 1.00 12.16 O HETATM 1891 O HOH A 441 29.831 19.893 9.307 1.00 16.31 O HETATM 1892 O HOH A 442 11.132 33.968 25.070 1.00 14.04 O HETATM 1893 O HOH A 443 35.736 24.125 17.548 1.00 27.89 O HETATM 1894 O HOH A 444 27.185 44.278 5.403 1.00 25.78 O HETATM 1895 O HOH A 445 13.091 13.227 8.458 1.00 11.71 O HETATM 1896 O HOH A 446 22.773 36.310 -12.768 1.00 17.51 O HETATM 1897 O HOH A 447 0.420 20.816 17.469 1.00 20.83 O HETATM 1898 O HOH A 448 16.536 17.112 15.549 1.00 7.44 O HETATM 1899 O HOH A 449 7.887 30.614 -3.095 1.00 14.79 O HETATM 1900 O HOH A 450 22.684 31.126 24.354 1.00 12.64 O HETATM 1901 O HOH A 451 30.925 32.564 19.002 1.00 14.04 O HETATM 1902 O HOH A 452 29.806 25.720 24.198 1.00 5.32 O HETATM 1903 O HOH A 453 13.185 36.826 2.365 1.00 10.49 O HETATM 1904 O HOH A 454 12.907 21.496 21.005 1.00 8.08 O HETATM 1905 O HOH A 455 24.986 19.077 24.481 1.00 24.41 O HETATM 1906 O HOH A 456 12.216 22.295 -6.032 1.00 23.00 O HETATM 1907 O HOH A 457 24.049 14.285 17.429 1.00 25.25 O HETATM 1908 O HOH A 458 5.783 34.779 4.246 1.00 16.05 O HETATM 1909 O HOH A 459 14.365 16.858 8.291 1.00 16.53 O HETATM 1910 O HOH A 460 12.660 35.944 22.757 1.00 5.91 O HETATM 1911 O HOH A 461 5.284 54.146 9.438 1.00 36.14 O HETATM 1912 O HOH A 462 12.386 19.699 18.323 1.00 8.92 O HETATM 1913 O HOH A 463 8.430 23.781 32.921 1.00 23.65 O HETATM 1914 O HOH A 464 7.118 16.015 7.484 1.00 22.47 O HETATM 1915 O HOH A 465 28.121 20.008 -9.045 1.00 23.92 O HETATM 1916 O HOH A 466 7.944 44.379 10.819 1.00 14.14 O HETATM 1917 O HOH A 467 23.655 26.087 29.566 1.00 15.41 O HETATM 1918 O HOH A 468 25.259 14.339 4.017 1.00 15.65 O HETATM 1919 O HOH A 469 14.529 14.556 15.217 1.00 17.11 O HETATM 1920 O HOH A 470 19.424 15.011 0.231 1.00 28.35 O HETATM 1921 O HOH A 471 22.493 12.989 1.559 1.00 19.33 O HETATM 1922 O HOH A 472 24.182 16.586 -2.322 1.00 25.22 O HETATM 1923 O HOH A 473 32.631 29.100 26.468 1.00 32.63 O HETATM 1924 O HOH A 474 31.066 21.523 20.258 1.00 15.53 O HETATM 1925 O HOH A 475 35.623 31.022 30.500 1.00 28.59 O HETATM 1926 O HOH A 476 5.558 18.137 8.952 1.00 17.94 O HETATM 1927 O HOH A 477 6.195 26.901 8.046 1.00 14.80 O HETATM 1928 O HOH A 478 19.173 16.150 -2.670 1.00 20.69 O HETATM 1929 O HOH A 479 1.851 27.269 7.349 1.00 19.85 O HETATM 1930 O HOH A 480 16.014 36.505 30.779 1.00 19.03 O HETATM 1931 O HOH A 481 8.258 21.368 4.676 1.00 12.72 O HETATM 1932 O HOH A 482 2.341 33.388 10.582 1.00 16.39 O HETATM 1933 O HOH A 483 29.090 40.114 -12.082 1.00 28.01 O HETATM 1934 O HOH A 484 30.643 32.834 33.184 1.00 28.85 O HETATM 1935 O HOH A 485 1.674 30.598 20.817 1.00 21.03 O HETATM 1936 O HOH A 486 0.114 25.867 20.086 1.00 26.83 O HETATM 1937 O HOH A 487 23.060 12.757 12.568 1.00 15.71 O HETATM 1938 O HOH A 488 27.422 16.485 10.012 1.00 13.03 O HETATM 1939 O HOH A 489 15.312 26.468 -6.258 1.00 21.79 O HETATM 1940 O HOH A 490 28.036 26.659 19.957 1.00 15.94 O HETATM 1941 O HOH A 491 24.386 43.443 17.278 1.00 20.33 O HETATM 1942 O HOH A 492 34.496 24.180 24.745 1.00 10.17 O HETATM 1943 O HOH A 493 21.407 10.427 22.157 1.00 15.51 O HETATM 1944 O HOH A 494 15.389 31.320 -15.002 1.00 21.99 O HETATM 1945 O HOH A 495 26.033 40.152 18.749 1.00 22.70 O HETATM 1946 O HOH A 496 29.131 22.726 21.160 1.00 7.32 O HETATM 1947 O HOH A 497 16.980 18.399 36.464 1.00 32.00 O HETATM 1948 O HOH A 498 7.849 45.036 17.116 1.00 11.49 O HETATM 1949 O HOH A 499 2.828 24.761 6.746 1.00 16.01 O HETATM 1950 O HOH A 500 36.839 33.317 21.906 1.00 22.58 O HETATM 1951 O HOH A 501 21.526 42.868 23.892 1.00 32.15 O HETATM 1952 O HOH A 502 15.787 13.149 13.448 1.00 23.14 O HETATM 1953 O HOH A 503 27.967 15.149 17.655 1.00 22.84 O HETATM 1954 O HOH A 504 18.462 14.273 27.942 1.00 21.96 O HETATM 1955 O HOH A 505 10.011 15.004 24.734 1.00 20.09 O HETATM 1956 O HOH A 506 27.730 32.210 7.270 1.00 17.18 O HETATM 1957 O HOH A 507 16.721 15.126 2.039 1.00 31.48 O HETATM 1958 O HOH A 508 30.283 19.106 15.994 1.00 8.98 O HETATM 1959 O HOH A 509 5.918 21.410 25.866 1.00 28.04 O HETATM 1960 O HOH A 510 8.390 39.802 23.701 1.00 18.08 O HETATM 1961 O HOH A 511 25.902 35.993 6.189 1.00 22.36 O HETATM 1962 O HOH A 512 5.646 42.840 10.376 1.00 22.04 O HETATM 1963 O HOH A 513 23.831 28.372 -18.089 1.00 20.01 O HETATM 1964 O HOH A 514 5.192 31.397 31.136 1.00 19.88 O HETATM 1965 O HOH A 515 32.155 21.954 22.751 1.00 21.42 O HETATM 1966 O HOH A 516 4.446 39.066 21.977 1.00 26.63 O HETATM 1967 O HOH A 517 28.097 39.326 6.226 1.00 36.78 O HETATM 1968 O HOH A 518 29.632 17.328 10.125 1.00 23.33 O HETATM 1969 O HOH A 519 31.773 23.740 24.616 1.00 14.20 O HETATM 1970 O HOH A 520 0.656 23.561 7.507 1.00 19.68 O CONECT 56 1840 CONECT 71 1839 CONECT 72 1839 1840 CONECT 83 1839 CONECT 105 1839 CONECT 140 1840 CONECT 141 1839 CONECT 183 1840 CONECT 1811 1812 1813 CONECT 1812 1811 CONECT 1813 1811 1814 1815 CONECT 1814 1813 CONECT 1815 1813 1816 CONECT 1816 1815 CONECT 1817 1818 1819 CONECT 1818 1817 CONECT 1819 1817 1820 1821 CONECT 1820 1819 CONECT 1821 1819 1822 CONECT 1822 1821 CONECT 1823 1824 1825 CONECT 1824 1823 CONECT 1825 1823 1826 1827 CONECT 1826 1825 CONECT 1827 1825 1828 CONECT 1828 1827 CONECT 1829 1830 1831 CONECT 1830 1829 CONECT 1831 1829 1832 1833 CONECT 1832 1831 CONECT 1833 1831 1834 1835 CONECT 1834 1833 CONECT 1835 1833 1836 1837 CONECT 1836 1835 CONECT 1837 1835 1838 CONECT 1838 1837 CONECT 1839 71 72 83 105 CONECT 1839 141 1904 1912 CONECT 1840 56 72 140 183 CONECT 1840 1876 1898 CONECT 1841 1842 1843 1844 1845 CONECT 1842 1841 CONECT 1843 1841 CONECT 1844 1841 CONECT 1845 1841 CONECT 1846 1847 1848 1849 1850 CONECT 1847 1846 CONECT 1848 1846 CONECT 1849 1846 CONECT 1850 1846 CONECT 1876 1840 CONECT 1898 1840 CONECT 1904 1839 CONECT 1912 1839 MASTER 310 0 8 4 26 0 0 6 1969 1 54 19 END