data_8YJY # _entry.id 8YJY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YJY pdb_00008yjy 10.2210/pdb8yjy/pdb WWPDB D_1300045771 ? ? EMDB EMD-39353 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-05-01 2 'Structure model' 1 1 2024-06-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.identifier_ORCID' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YJY _pdbx_database_status.recvd_initial_deposition_date 2024-03-03 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM Structure of CdnG-E2 complex from Serratia marcescens' _pdbx_database_related.db_id EMD-39353 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email wanglf@whu.edu.cn _pdbx_contact_author.name_first Longfei _pdbx_contact_author.name_last Wang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7788-2123 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xiao, J.' 1 ? 'Wang, L.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Microbiol' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2058-5276 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 9 _citation.language ? _citation.page_first 1566 _citation.page_last 1578 _citation.title 'Phage defence system CBASS is regulated by a prokaryotic E2 enzyme that imitates the ubiquitin pathway.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41564-024-01684-z _citation.pdbx_database_id_PubMed 38649411 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yan, Y.' 1 ? primary 'Xiao, J.' 2 ? primary 'Huang, F.' 3 ? primary 'Xian, W.' 4 ? primary 'Yu, B.' 5 ? primary 'Cheng, R.' 6 ? primary 'Wu, H.' 7 ? primary 'Lu, X.' 8 ? primary 'Wang, X.' 9 ? primary 'Huang, W.' 10 ? primary 'Li, J.' 11 ? primary 'Oyejobi, G.K.' 12 ? primary 'Robinson, C.V.' 13 ? primary 'Wu, H.' 14 ? primary 'Wu, D.' 15 ? primary 'Liu, X.' 16 ? primary 'Wang, L.' 17 ? primary 'Zhu, B.' 18 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man SmCdnG 45481.707 1 ? ? ? ? 2 polymer man 'Type VI secretion protein' 18782.670 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name SmE2 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MYGSTTARNLPSGKKQRIADLLSQIIETLDLTKTQYANIESAYNGVGTFLSEGDDPLLQDAVIYPQGSVRLNTTVKPKNE EQYDIDLICYLPHATQADYTGVISAIRQRLESHKTYKTLLSELPRGFRINYAGDYHLDITPGRDHTGTAHPGQPLWVVDA QTAWKESNPSGYAEWFESSASVQPLRTILVMDSASRVGTEALLPLPDSTDKKLLNHIVQILKRHRDEWAAEQDEVRQRCR PISVIITTLACHAYNHIIADRRAYDNDLDILLDVLELMPDFIVSTQGAIHVNNPHMPEENFAEKWNRSEQDEGPQRSEAF YQWHAAAQATFNTIAASVGEDNLFLSLEDSFGKTPVDVVRQRLMEHMQSAREQGSLHLDKKTGGLIATGLAGTAAQAGVP KNTFYGE ; ;MYGSTTARNLPSGKKQRIADLLSQIIETLDLTKTQYANIESAYNGVGTFLSEGDDPLLQDAVIYPQGSVRLNTTVKPKNE EQYDIDLICYLPHATQADYTGVISAIRQRLESHKTYKTLLSELPRGFRINYAGDYHLDITPGRDHTGTAHPGQPLWVVDA QTAWKESNPSGYAEWFESSASVQPLRTILVMDSASRVGTEALLPLPDSTDKKLLNHIVQILKRHRDEWAAEQDEVRQRCR PISVIITTLACHAYNHIIADRRAYDNDLDILLDVLELMPDFIVSTQGAIHVNNPHMPEENFAEKWNRSEQDEGPQRSEAF YQWHAAAQATFNTIAASVGEDNLFLSLEDSFGKTPVDVVRQRLMEHMQSAREQGSLHLDKKTGGLIATGLAGTAAQAGVP KNTFYGE ; A ? 2 'polypeptide(L)' no no ;MNNVVIRHHCKPLTIAQQYRALKAGGPYERLRIIHHDRTLLWEGWLQPSLFSRRYKVAVRYSLGTPPICVVTEPDLFALA GTRAIPHLYPADKHIPGARLCLFLPRSQADDGLSEWRAQLKISDTLIPWASLWLFYFEQWLHTGHWEGGGKHPRPSEVKN ER ; ;MNNVVIRHHCKPLTIAQQYRALKAGGPYERLRIIHHDRTLLWEGWLQPSLFSRRYKVAVRYSLGTPPICVVTEPDLFALA GTRAIPHLYPADKHIPGARLCLFLPRSQADDGLSEWRAQLKISDTLIPWASLWLFYFEQWLHTGHWEGGGKHPRPSEVKN ER ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 TYR n 1 3 GLY n 1 4 SER n 1 5 THR n 1 6 THR n 1 7 ALA n 1 8 ARG n 1 9 ASN n 1 10 LEU n 1 11 PRO n 1 12 SER n 1 13 GLY n 1 14 LYS n 1 15 LYS n 1 16 GLN n 1 17 ARG n 1 18 ILE n 1 19 ALA n 1 20 ASP n 1 21 LEU n 1 22 LEU n 1 23 SER n 1 24 GLN n 1 25 ILE n 1 26 ILE n 1 27 GLU n 1 28 THR n 1 29 LEU n 1 30 ASP n 1 31 LEU n 1 32 THR n 1 33 LYS n 1 34 THR n 1 35 GLN n 1 36 TYR n 1 37 ALA n 1 38 ASN n 1 39 ILE n 1 40 GLU n 1 41 SER n 1 42 ALA n 1 43 TYR n 1 44 ASN n 1 45 GLY n 1 46 VAL n 1 47 GLY n 1 48 THR n 1 49 PHE n 1 50 LEU n 1 51 SER n 1 52 GLU n 1 53 GLY n 1 54 ASP n 1 55 ASP n 1 56 PRO n 1 57 LEU n 1 58 LEU n 1 59 GLN n 1 60 ASP n 1 61 ALA n 1 62 VAL n 1 63 ILE n 1 64 TYR n 1 65 PRO n 1 66 GLN n 1 67 GLY n 1 68 SER n 1 69 VAL n 1 70 ARG n 1 71 LEU n 1 72 ASN n 1 73 THR n 1 74 THR n 1 75 VAL n 1 76 LYS n 1 77 PRO n 1 78 LYS n 1 79 ASN n 1 80 GLU n 1 81 GLU n 1 82 GLN n 1 83 TYR n 1 84 ASP n 1 85 ILE n 1 86 ASP n 1 87 LEU n 1 88 ILE n 1 89 CYS n 1 90 TYR n 1 91 LEU n 1 92 PRO n 1 93 HIS n 1 94 ALA n 1 95 THR n 1 96 GLN n 1 97 ALA n 1 98 ASP n 1 99 TYR n 1 100 THR n 1 101 GLY n 1 102 VAL n 1 103 ILE n 1 104 SER n 1 105 ALA n 1 106 ILE n 1 107 ARG n 1 108 GLN n 1 109 ARG n 1 110 LEU n 1 111 GLU n 1 112 SER n 1 113 HIS n 1 114 LYS n 1 115 THR n 1 116 TYR n 1 117 LYS n 1 118 THR n 1 119 LEU n 1 120 LEU n 1 121 SER n 1 122 GLU n 1 123 LEU n 1 124 PRO n 1 125 ARG n 1 126 GLY n 1 127 PHE n 1 128 ARG n 1 129 ILE n 1 130 ASN n 1 131 TYR n 1 132 ALA n 1 133 GLY n 1 134 ASP n 1 135 TYR n 1 136 HIS n 1 137 LEU n 1 138 ASP n 1 139 ILE n 1 140 THR n 1 141 PRO n 1 142 GLY n 1 143 ARG n 1 144 ASP n 1 145 HIS n 1 146 THR n 1 147 GLY n 1 148 THR n 1 149 ALA n 1 150 HIS n 1 151 PRO n 1 152 GLY n 1 153 GLN n 1 154 PRO n 1 155 LEU n 1 156 TRP n 1 157 VAL n 1 158 VAL n 1 159 ASP n 1 160 ALA n 1 161 GLN n 1 162 THR n 1 163 ALA n 1 164 TRP n 1 165 LYS n 1 166 GLU n 1 167 SER n 1 168 ASN n 1 169 PRO n 1 170 SER n 1 171 GLY n 1 172 TYR n 1 173 ALA n 1 174 GLU n 1 175 TRP n 1 176 PHE n 1 177 GLU n 1 178 SER n 1 179 SER n 1 180 ALA n 1 181 SER n 1 182 VAL n 1 183 GLN n 1 184 PRO n 1 185 LEU n 1 186 ARG n 1 187 THR n 1 188 ILE n 1 189 LEU n 1 190 VAL n 1 191 MET n 1 192 ASP n 1 193 SER n 1 194 ALA n 1 195 SER n 1 196 ARG n 1 197 VAL n 1 198 GLY n 1 199 THR n 1 200 GLU n 1 201 ALA n 1 202 LEU n 1 203 LEU n 1 204 PRO n 1 205 LEU n 1 206 PRO n 1 207 ASP n 1 208 SER n 1 209 THR n 1 210 ASP n 1 211 LYS n 1 212 LYS n 1 213 LEU n 1 214 LEU n 1 215 ASN n 1 216 HIS n 1 217 ILE n 1 218 VAL n 1 219 GLN n 1 220 ILE n 1 221 LEU n 1 222 LYS n 1 223 ARG n 1 224 HIS n 1 225 ARG n 1 226 ASP n 1 227 GLU n 1 228 TRP n 1 229 ALA n 1 230 ALA n 1 231 GLU n 1 232 GLN n 1 233 ASP n 1 234 GLU n 1 235 VAL n 1 236 ARG n 1 237 GLN n 1 238 ARG n 1 239 CYS n 1 240 ARG n 1 241 PRO n 1 242 ILE n 1 243 SER n 1 244 VAL n 1 245 ILE n 1 246 ILE n 1 247 THR n 1 248 THR n 1 249 LEU n 1 250 ALA n 1 251 CYS n 1 252 HIS n 1 253 ALA n 1 254 TYR n 1 255 ASN n 1 256 HIS n 1 257 ILE n 1 258 ILE n 1 259 ALA n 1 260 ASP n 1 261 ARG n 1 262 ARG n 1 263 ALA n 1 264 TYR n 1 265 ASP n 1 266 ASN n 1 267 ASP n 1 268 LEU n 1 269 ASP n 1 270 ILE n 1 271 LEU n 1 272 LEU n 1 273 ASP n 1 274 VAL n 1 275 LEU n 1 276 GLU n 1 277 LEU n 1 278 MET n 1 279 PRO n 1 280 ASP n 1 281 PHE n 1 282 ILE n 1 283 VAL n 1 284 SER n 1 285 THR n 1 286 GLN n 1 287 GLY n 1 288 ALA n 1 289 ILE n 1 290 HIS n 1 291 VAL n 1 292 ASN n 1 293 ASN n 1 294 PRO n 1 295 HIS n 1 296 MET n 1 297 PRO n 1 298 GLU n 1 299 GLU n 1 300 ASN n 1 301 PHE n 1 302 ALA n 1 303 GLU n 1 304 LYS n 1 305 TRP n 1 306 ASN n 1 307 ARG n 1 308 SER n 1 309 GLU n 1 310 GLN n 1 311 ASP n 1 312 GLU n 1 313 GLY n 1 314 PRO n 1 315 GLN n 1 316 ARG n 1 317 SER n 1 318 GLU n 1 319 ALA n 1 320 PHE n 1 321 TYR n 1 322 GLN n 1 323 TRP n 1 324 HIS n 1 325 ALA n 1 326 ALA n 1 327 ALA n 1 328 GLN n 1 329 ALA n 1 330 THR n 1 331 PHE n 1 332 ASN n 1 333 THR n 1 334 ILE n 1 335 ALA n 1 336 ALA n 1 337 SER n 1 338 VAL n 1 339 GLY n 1 340 GLU n 1 341 ASP n 1 342 ASN n 1 343 LEU n 1 344 PHE n 1 345 LEU n 1 346 SER n 1 347 LEU n 1 348 GLU n 1 349 ASP n 1 350 SER n 1 351 PHE n 1 352 GLY n 1 353 LYS n 1 354 THR n 1 355 PRO n 1 356 VAL n 1 357 ASP n 1 358 VAL n 1 359 VAL n 1 360 ARG n 1 361 GLN n 1 362 ARG n 1 363 LEU n 1 364 MET n 1 365 GLU n 1 366 HIS n 1 367 MET n 1 368 GLN n 1 369 SER n 1 370 ALA n 1 371 ARG n 1 372 GLU n 1 373 GLN n 1 374 GLY n 1 375 SER n 1 376 LEU n 1 377 HIS n 1 378 LEU n 1 379 ASP n 1 380 LYS n 1 381 LYS n 1 382 THR n 1 383 GLY n 1 384 GLY n 1 385 LEU n 1 386 ILE n 1 387 ALA n 1 388 THR n 1 389 GLY n 1 390 LEU n 1 391 ALA n 1 392 GLY n 1 393 THR n 1 394 ALA n 1 395 ALA n 1 396 GLN n 1 397 ALA n 1 398 GLY n 1 399 VAL n 1 400 PRO n 1 401 LYS n 1 402 ASN n 1 403 THR n 1 404 PHE n 1 405 TYR n 1 406 GLY n 1 407 GLU n 2 1 MET n 2 2 ASN n 2 3 ASN n 2 4 VAL n 2 5 VAL n 2 6 ILE n 2 7 ARG n 2 8 HIS n 2 9 HIS n 2 10 CYS n 2 11 LYS n 2 12 PRO n 2 13 LEU n 2 14 THR n 2 15 ILE n 2 16 ALA n 2 17 GLN n 2 18 GLN n 2 19 TYR n 2 20 ARG n 2 21 ALA n 2 22 LEU n 2 23 LYS n 2 24 ALA n 2 25 GLY n 2 26 GLY n 2 27 PRO n 2 28 TYR n 2 29 GLU n 2 30 ARG n 2 31 LEU n 2 32 ARG n 2 33 ILE n 2 34 ILE n 2 35 HIS n 2 36 HIS n 2 37 ASP n 2 38 ARG n 2 39 THR n 2 40 LEU n 2 41 LEU n 2 42 TRP n 2 43 GLU n 2 44 GLY n 2 45 TRP n 2 46 LEU n 2 47 GLN n 2 48 PRO n 2 49 SER n 2 50 LEU n 2 51 PHE n 2 52 SER n 2 53 ARG n 2 54 ARG n 2 55 TYR n 2 56 LYS n 2 57 VAL n 2 58 ALA n 2 59 VAL n 2 60 ARG n 2 61 TYR n 2 62 SER n 2 63 LEU n 2 64 GLY n 2 65 THR n 2 66 PRO n 2 67 PRO n 2 68 ILE n 2 69 CYS n 2 70 VAL n 2 71 VAL n 2 72 THR n 2 73 GLU n 2 74 PRO n 2 75 ASP n 2 76 LEU n 2 77 PHE n 2 78 ALA n 2 79 LEU n 2 80 ALA n 2 81 GLY n 2 82 THR n 2 83 ARG n 2 84 ALA n 2 85 ILE n 2 86 PRO n 2 87 HIS n 2 88 LEU n 2 89 TYR n 2 90 PRO n 2 91 ALA n 2 92 ASP n 2 93 LYS n 2 94 HIS n 2 95 ILE n 2 96 PRO n 2 97 GLY n 2 98 ALA n 2 99 ARG n 2 100 LEU n 2 101 CYS n 2 102 LEU n 2 103 PHE n 2 104 LEU n 2 105 PRO n 2 106 ARG n 2 107 SER n 2 108 GLN n 2 109 ALA n 2 110 ASP n 2 111 ASP n 2 112 GLY n 2 113 LEU n 2 114 SER n 2 115 GLU n 2 116 TRP n 2 117 ARG n 2 118 ALA n 2 119 GLN n 2 120 LEU n 2 121 LYS n 2 122 ILE n 2 123 SER n 2 124 ASP n 2 125 THR n 2 126 LEU n 2 127 ILE n 2 128 PRO n 2 129 TRP n 2 130 ALA n 2 131 SER n 2 132 LEU n 2 133 TRP n 2 134 LEU n 2 135 PHE n 2 136 TYR n 2 137 PHE n 2 138 GLU n 2 139 GLN n 2 140 TRP n 2 141 LEU n 2 142 HIS n 2 143 THR n 2 144 GLY n 2 145 HIS n 2 146 TRP n 2 147 GLU n 2 148 GLY n 2 149 GLY n 2 150 GLY n 2 151 LYS n 2 152 HIS n 2 153 PRO n 2 154 ARG n 2 155 PRO n 2 156 SER n 2 157 GLU n 2 158 VAL n 2 159 LYS n 2 160 ASN n 2 161 GLU n 2 162 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 407 ? ? ? ? ? ? ? ? ? 'Serratia marcescens' 615 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 162 ? ? 'AR325_02475, AR325_06795' ? ? ? ? ? ? 'Serratia marcescens' 615 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 TYR 2 2 ? ? ? A . n A 1 3 GLY 3 3 ? ? ? A . n A 1 4 SER 4 4 ? ? ? A . n A 1 5 THR 5 5 5 THR THR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLN 16 16 16 GLN GLN A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 ASN 38 38 38 ASN ASN A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 TYR 43 43 43 TYR TYR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 GLN 66 66 66 GLN GLN A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 GLN 82 82 82 GLN GLN A . n A 1 83 TYR 83 83 83 TYR TYR A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 CYS 89 89 89 CYS CYS A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 TYR 99 99 99 TYR TYR A . n A 1 100 THR 100 100 100 THR THR A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ILE 103 103 103 ILE ILE A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 ALA 105 105 105 ALA ALA A . n A 1 106 ILE 106 106 106 ILE ILE A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 ARG 109 109 109 ARG ARG A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 SER 112 112 112 SER SER A . n A 1 113 HIS 113 113 113 HIS HIS A . n A 1 114 LYS 114 114 114 LYS LYS A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 LYS 117 117 117 LYS LYS A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 SER 121 121 121 SER SER A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 PHE 127 127 127 PHE PHE A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 ASN 130 130 130 ASN ASN A . n A 1 131 TYR 131 131 131 TYR TYR A . n A 1 132 ALA 132 132 132 ALA ALA A . n A 1 133 GLY 133 133 133 GLY GLY A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 TYR 135 135 135 TYR TYR A . n A 1 136 HIS 136 136 136 HIS HIS A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 ARG 143 143 143 ARG ARG A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 HIS 145 145 145 HIS HIS A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 GLY 147 147 147 GLY GLY A . n A 1 148 THR 148 148 148 THR THR A . n A 1 149 ALA 149 149 149 ALA ALA A . n A 1 150 HIS 150 150 150 HIS HIS A . n A 1 151 PRO 151 151 151 PRO PRO A . n A 1 152 GLY 152 152 152 GLY GLY A . n A 1 153 GLN 153 153 153 GLN GLN A . n A 1 154 PRO 154 154 154 PRO PRO A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 TRP 156 156 156 TRP TRP A . n A 1 157 VAL 157 157 157 VAL VAL A . n A 1 158 VAL 158 158 158 VAL VAL A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 ALA 160 160 160 ALA ALA A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 THR 162 162 162 THR THR A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 SER 167 167 167 SER SER A . n A 1 168 ASN 168 168 168 ASN ASN A . n A 1 169 PRO 169 169 169 PRO PRO A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 TYR 172 172 172 TYR TYR A . n A 1 173 ALA 173 173 173 ALA ALA A . n A 1 174 GLU 174 174 174 GLU GLU A . n A 1 175 TRP 175 175 175 TRP TRP A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 GLU 177 177 177 GLU GLU A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 SER 179 179 179 SER SER A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 PRO 184 184 184 PRO PRO A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 ARG 186 186 186 ARG ARG A . n A 1 187 THR 187 187 187 THR THR A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 VAL 190 190 190 VAL VAL A . n A 1 191 MET 191 191 ? ? ? A . n A 1 192 ASP 192 192 ? ? ? A . n A 1 193 SER 193 193 ? ? ? A . n A 1 194 ALA 194 194 ? ? ? A . n A 1 195 SER 195 195 ? ? ? A . n A 1 196 ARG 196 196 ? ? ? A . n A 1 197 VAL 197 197 ? ? ? A . n A 1 198 GLY 198 198 ? ? ? A . n A 1 199 THR 199 199 ? ? ? A . n A 1 200 GLU 200 200 ? ? ? A . n A 1 201 ALA 201 201 ? ? ? A . n A 1 202 LEU 202 202 ? ? ? A . n A 1 203 LEU 203 203 ? ? ? A . n A 1 204 PRO 204 204 ? ? ? A . n A 1 205 LEU 205 205 ? ? ? A . n A 1 206 PRO 206 206 ? ? ? A . n A 1 207 ASP 207 207 ? ? ? A . n A 1 208 SER 208 208 ? ? ? A . n A 1 209 THR 209 209 ? ? ? A . n A 1 210 ASP 210 210 ? ? ? A . n A 1 211 LYS 211 211 211 LYS LYS A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 ASN 215 215 215 ASN ASN A . n A 1 216 HIS 216 216 216 HIS HIS A . n A 1 217 ILE 217 217 217 ILE ILE A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 GLN 219 219 219 GLN GLN A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 HIS 224 224 224 HIS HIS A . n A 1 225 ARG 225 225 225 ARG ARG A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 GLU 227 227 227 GLU GLU A . n A 1 228 TRP 228 228 228 TRP TRP A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 GLN 232 232 232 GLN GLN A . n A 1 233 ASP 233 233 233 ASP ASP A . n A 1 234 GLU 234 234 234 GLU GLU A . n A 1 235 VAL 235 235 235 VAL VAL A . n A 1 236 ARG 236 236 236 ARG ARG A . n A 1 237 GLN 237 237 237 GLN GLN A . n A 1 238 ARG 238 238 238 ARG ARG A . n A 1 239 CYS 239 239 239 CYS CYS A . n A 1 240 ARG 240 240 240 ARG ARG A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 ILE 242 242 242 ILE ILE A . n A 1 243 SER 243 243 243 SER SER A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 ILE 245 245 245 ILE ILE A . n A 1 246 ILE 246 246 246 ILE ILE A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 THR 248 248 248 THR THR A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 CYS 251 251 251 CYS CYS A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ALA 253 253 253 ALA ALA A . n A 1 254 TYR 254 254 254 TYR TYR A . n A 1 255 ASN 255 255 255 ASN ASN A . n A 1 256 HIS 256 256 256 HIS HIS A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 ILE 258 258 258 ILE ILE A . n A 1 259 ALA 259 259 259 ALA ALA A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 ARG 261 261 261 ARG ARG A . n A 1 262 ARG 262 262 262 ARG ARG A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 TYR 264 264 264 TYR TYR A . n A 1 265 ASP 265 265 265 ASP ASP A . n A 1 266 ASN 266 266 266 ASN ASN A . n A 1 267 ASP 267 267 267 ASP ASP A . n A 1 268 LEU 268 268 268 LEU LEU A . n A 1 269 ASP 269 269 269 ASP ASP A . n A 1 270 ILE 270 270 270 ILE ILE A . n A 1 271 LEU 271 271 271 LEU LEU A . n A 1 272 LEU 272 272 272 LEU LEU A . n A 1 273 ASP 273 273 273 ASP ASP A . n A 1 274 VAL 274 274 274 VAL VAL A . n A 1 275 LEU 275 275 275 LEU LEU A . n A 1 276 GLU 276 276 276 GLU GLU A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 MET 278 278 278 MET MET A . n A 1 279 PRO 279 279 279 PRO PRO A . n A 1 280 ASP 280 280 280 ASP ASP A . n A 1 281 PHE 281 281 281 PHE PHE A . n A 1 282 ILE 282 282 282 ILE ILE A . n A 1 283 VAL 283 283 283 VAL VAL A . n A 1 284 SER 284 284 284 SER SER A . n A 1 285 THR 285 285 285 THR THR A . n A 1 286 GLN 286 286 286 GLN GLN A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 ALA 288 288 288 ALA ALA A . n A 1 289 ILE 289 289 289 ILE ILE A . n A 1 290 HIS 290 290 290 HIS HIS A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 ASN 292 292 292 ASN ASN A . n A 1 293 ASN 293 293 293 ASN ASN A . n A 1 294 PRO 294 294 294 PRO PRO A . n A 1 295 HIS 295 295 295 HIS HIS A . n A 1 296 MET 296 296 296 MET MET A . n A 1 297 PRO 297 297 297 PRO PRO A . n A 1 298 GLU 298 298 298 GLU GLU A . n A 1 299 GLU 299 299 299 GLU GLU A . n A 1 300 ASN 300 300 300 ASN ASN A . n A 1 301 PHE 301 301 301 PHE PHE A . n A 1 302 ALA 302 302 302 ALA ALA A . n A 1 303 GLU 303 303 303 GLU GLU A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 TRP 305 305 305 TRP TRP A . n A 1 306 ASN 306 306 306 ASN ASN A . n A 1 307 ARG 307 307 307 ARG ARG A . n A 1 308 SER 308 308 308 SER SER A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 GLN 310 310 310 GLN GLN A . n A 1 311 ASP 311 311 311 ASP ASP A . n A 1 312 GLU 312 312 312 GLU GLU A . n A 1 313 GLY 313 313 313 GLY GLY A . n A 1 314 PRO 314 314 314 PRO PRO A . n A 1 315 GLN 315 315 315 GLN GLN A . n A 1 316 ARG 316 316 316 ARG ARG A . n A 1 317 SER 317 317 317 SER SER A . n A 1 318 GLU 318 318 318 GLU GLU A . n A 1 319 ALA 319 319 319 ALA ALA A . n A 1 320 PHE 320 320 320 PHE PHE A . n A 1 321 TYR 321 321 321 TYR TYR A . n A 1 322 GLN 322 322 322 GLN GLN A . n A 1 323 TRP 323 323 323 TRP TRP A . n A 1 324 HIS 324 324 324 HIS HIS A . n A 1 325 ALA 325 325 325 ALA ALA A . n A 1 326 ALA 326 326 326 ALA ALA A . n A 1 327 ALA 327 327 327 ALA ALA A . n A 1 328 GLN 328 328 328 GLN GLN A . n A 1 329 ALA 329 329 329 ALA ALA A . n A 1 330 THR 330 330 330 THR THR A . n A 1 331 PHE 331 331 331 PHE PHE A . n A 1 332 ASN 332 332 332 ASN ASN A . n A 1 333 THR 333 333 333 THR THR A . n A 1 334 ILE 334 334 334 ILE ILE A . n A 1 335 ALA 335 335 335 ALA ALA A . n A 1 336 ALA 336 336 336 ALA ALA A . n A 1 337 SER 337 337 337 SER SER A . n A 1 338 VAL 338 338 338 VAL VAL A . n A 1 339 GLY 339 339 339 GLY GLY A . n A 1 340 GLU 340 340 340 GLU GLU A . n A 1 341 ASP 341 341 341 ASP ASP A . n A 1 342 ASN 342 342 342 ASN ASN A . n A 1 343 LEU 343 343 343 LEU LEU A . n A 1 344 PHE 344 344 344 PHE PHE A . n A 1 345 LEU 345 345 345 LEU LEU A . n A 1 346 SER 346 346 346 SER SER A . n A 1 347 LEU 347 347 347 LEU LEU A . n A 1 348 GLU 348 348 348 GLU GLU A . n A 1 349 ASP 349 349 349 ASP ASP A . n A 1 350 SER 350 350 350 SER SER A . n A 1 351 PHE 351 351 351 PHE PHE A . n A 1 352 GLY 352 352 352 GLY GLY A . n A 1 353 LYS 353 353 353 LYS LYS A . n A 1 354 THR 354 354 354 THR THR A . n A 1 355 PRO 355 355 355 PRO PRO A . n A 1 356 VAL 356 356 356 VAL VAL A . n A 1 357 ASP 357 357 357 ASP ASP A . n A 1 358 VAL 358 358 358 VAL VAL A . n A 1 359 VAL 359 359 359 VAL VAL A . n A 1 360 ARG 360 360 360 ARG ARG A . n A 1 361 GLN 361 361 361 GLN GLN A . n A 1 362 ARG 362 362 362 ARG ARG A . n A 1 363 LEU 363 363 363 LEU LEU A . n A 1 364 MET 364 364 364 MET MET A . n A 1 365 GLU 365 365 365 GLU GLU A . n A 1 366 HIS 366 366 366 HIS HIS A . n A 1 367 MET 367 367 367 MET MET A . n A 1 368 GLN 368 368 368 GLN GLN A . n A 1 369 SER 369 369 369 SER SER A . n A 1 370 ALA 370 370 370 ALA ALA A . n A 1 371 ARG 371 371 371 ARG ARG A . n A 1 372 GLU 372 372 372 GLU GLU A . n A 1 373 GLN 373 373 373 GLN GLN A . n A 1 374 GLY 374 374 374 GLY GLY A . n A 1 375 SER 375 375 375 SER SER A . n A 1 376 LEU 376 376 376 LEU LEU A . n A 1 377 HIS 377 377 377 HIS HIS A . n A 1 378 LEU 378 378 378 LEU LEU A . n A 1 379 ASP 379 379 379 ASP ASP A . n A 1 380 LYS 380 380 380 LYS LYS A . n A 1 381 LYS 381 381 381 LYS LYS A . n A 1 382 THR 382 382 382 THR THR A . n A 1 383 GLY 383 383 383 GLY GLY A . n A 1 384 GLY 384 384 384 GLY GLY A . n A 1 385 LEU 385 385 385 LEU LEU A . n A 1 386 ILE 386 386 386 ILE ILE A . n A 1 387 ALA 387 387 387 ALA ALA A . n A 1 388 THR 388 388 388 THR THR A . n A 1 389 GLY 389 389 ? ? ? A . n A 1 390 LEU 390 390 ? ? ? A . n A 1 391 ALA 391 391 ? ? ? A . n A 1 392 GLY 392 392 ? ? ? A . n A 1 393 THR 393 393 ? ? ? A . n A 1 394 ALA 394 394 ? ? ? A . n A 1 395 ALA 395 395 ? ? ? A . n A 1 396 GLN 396 396 ? ? ? A . n A 1 397 ALA 397 397 397 ALA ALA A . n A 1 398 GLY 398 398 398 GLY GLY A . n A 1 399 VAL 399 399 399 VAL VAL A . n A 1 400 PRO 400 400 400 PRO PRO A . n A 1 401 LYS 401 401 401 LYS LYS A . n A 1 402 ASN 402 402 402 ASN ASN A . n A 1 403 THR 403 403 403 THR THR A . n A 1 404 PHE 404 404 404 PHE PHE A . n A 1 405 TYR 405 405 405 TYR TYR A . n A 1 406 GLY 406 406 ? ? ? A . n A 1 407 GLU 407 407 ? ? ? A . n B 2 1 MET 1 1 ? ? ? B . n B 2 2 ASN 2 2 ? ? ? B . n B 2 3 ASN 3 3 ? ? ? B . n B 2 4 VAL 4 4 4 VAL VAL B . n B 2 5 VAL 5 5 5 VAL VAL B . n B 2 6 ILE 6 6 6 ILE ILE B . n B 2 7 ARG 7 7 7 ARG ARG B . n B 2 8 HIS 8 8 8 HIS HIS B . n B 2 9 HIS 9 9 9 HIS HIS B . n B 2 10 CYS 10 10 10 CYS CYS B . n B 2 11 LYS 11 11 11 LYS LYS B . n B 2 12 PRO 12 12 12 PRO PRO B . n B 2 13 LEU 13 13 13 LEU LEU B . n B 2 14 THR 14 14 14 THR THR B . n B 2 15 ILE 15 15 15 ILE ILE B . n B 2 16 ALA 16 16 16 ALA ALA B . n B 2 17 GLN 17 17 17 GLN GLN B . n B 2 18 GLN 18 18 18 GLN GLN B . n B 2 19 TYR 19 19 19 TYR TYR B . n B 2 20 ARG 20 20 20 ARG ARG B . n B 2 21 ALA 21 21 21 ALA ALA B . n B 2 22 LEU 22 22 22 LEU LEU B . n B 2 23 LYS 23 23 23 LYS LYS B . n B 2 24 ALA 24 24 24 ALA ALA B . n B 2 25 GLY 25 25 25 GLY GLY B . n B 2 26 GLY 26 26 26 GLY GLY B . n B 2 27 PRO 27 27 27 PRO PRO B . n B 2 28 TYR 28 28 28 TYR TYR B . n B 2 29 GLU 29 29 29 GLU GLU B . n B 2 30 ARG 30 30 30 ARG ARG B . n B 2 31 LEU 31 31 31 LEU LEU B . n B 2 32 ARG 32 32 32 ARG ARG B . n B 2 33 ILE 33 33 33 ILE ILE B . n B 2 34 ILE 34 34 34 ILE ILE B . n B 2 35 HIS 35 35 35 HIS HIS B . n B 2 36 HIS 36 36 36 HIS HIS B . n B 2 37 ASP 37 37 37 ASP ASP B . n B 2 38 ARG 38 38 38 ARG ARG B . n B 2 39 THR 39 39 39 THR THR B . n B 2 40 LEU 40 40 40 LEU LEU B . n B 2 41 LEU 41 41 41 LEU LEU B . n B 2 42 TRP 42 42 42 TRP TRP B . n B 2 43 GLU 43 43 43 GLU GLU B . n B 2 44 GLY 44 44 44 GLY GLY B . n B 2 45 TRP 45 45 45 TRP TRP B . n B 2 46 LEU 46 46 46 LEU LEU B . n B 2 47 GLN 47 47 47 GLN GLN B . n B 2 48 PRO 48 48 48 PRO PRO B . n B 2 49 SER 49 49 49 SER SER B . n B 2 50 LEU 50 50 50 LEU LEU B . n B 2 51 PHE 51 51 51 PHE PHE B . n B 2 52 SER 52 52 52 SER SER B . n B 2 53 ARG 53 53 53 ARG ARG B . n B 2 54 ARG 54 54 54 ARG ARG B . n B 2 55 TYR 55 55 55 TYR TYR B . n B 2 56 LYS 56 56 56 LYS LYS B . n B 2 57 VAL 57 57 57 VAL VAL B . n B 2 58 ALA 58 58 58 ALA ALA B . n B 2 59 VAL 59 59 59 VAL VAL B . n B 2 60 ARG 60 60 60 ARG ARG B . n B 2 61 TYR 61 61 61 TYR TYR B . n B 2 62 SER 62 62 62 SER SER B . n B 2 63 LEU 63 63 63 LEU LEU B . n B 2 64 GLY 64 64 64 GLY GLY B . n B 2 65 THR 65 65 65 THR THR B . n B 2 66 PRO 66 66 66 PRO PRO B . n B 2 67 PRO 67 67 67 PRO PRO B . n B 2 68 ILE 68 68 68 ILE ILE B . n B 2 69 CYS 69 69 69 CYS CYS B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 VAL 71 71 71 VAL VAL B . n B 2 72 THR 72 72 72 THR THR B . n B 2 73 GLU 73 73 73 GLU GLU B . n B 2 74 PRO 74 74 74 PRO PRO B . n B 2 75 ASP 75 75 75 ASP ASP B . n B 2 76 LEU 76 76 76 LEU LEU B . n B 2 77 PHE 77 77 77 PHE PHE B . n B 2 78 ALA 78 78 78 ALA ALA B . n B 2 79 LEU 79 79 79 LEU LEU B . n B 2 80 ALA 80 80 80 ALA ALA B . n B 2 81 GLY 81 81 81 GLY GLY B . n B 2 82 THR 82 82 82 THR THR B . n B 2 83 ARG 83 83 83 ARG ARG B . n B 2 84 ALA 84 84 84 ALA ALA B . n B 2 85 ILE 85 85 85 ILE ILE B . n B 2 86 PRO 86 86 86 PRO PRO B . n B 2 87 HIS 87 87 87 HIS HIS B . n B 2 88 LEU 88 88 88 LEU LEU B . n B 2 89 TYR 89 89 89 TYR TYR B . n B 2 90 PRO 90 90 90 PRO PRO B . n B 2 91 ALA 91 91 91 ALA ALA B . n B 2 92 ASP 92 92 92 ASP ASP B . n B 2 93 LYS 93 93 93 LYS LYS B . n B 2 94 HIS 94 94 94 HIS HIS B . n B 2 95 ILE 95 95 95 ILE ILE B . n B 2 96 PRO 96 96 96 PRO PRO B . n B 2 97 GLY 97 97 97 GLY GLY B . n B 2 98 ALA 98 98 98 ALA ALA B . n B 2 99 ARG 99 99 99 ARG ARG B . n B 2 100 LEU 100 100 100 LEU LEU B . n B 2 101 CYS 101 101 101 CYS CYS B . n B 2 102 LEU 102 102 102 LEU LEU B . n B 2 103 PHE 103 103 103 PHE PHE B . n B 2 104 LEU 104 104 104 LEU LEU B . n B 2 105 PRO 105 105 105 PRO PRO B . n B 2 106 ARG 106 106 106 ARG ARG B . n B 2 107 SER 107 107 107 SER SER B . n B 2 108 GLN 108 108 108 GLN GLN B . n B 2 109 ALA 109 109 109 ALA ALA B . n B 2 110 ASP 110 110 110 ASP ASP B . n B 2 111 ASP 111 111 111 ASP ASP B . n B 2 112 GLY 112 112 112 GLY GLY B . n B 2 113 LEU 113 113 113 LEU LEU B . n B 2 114 SER 114 114 114 SER SER B . n B 2 115 GLU 115 115 115 GLU GLU B . n B 2 116 TRP 116 116 116 TRP TRP B . n B 2 117 ARG 117 117 117 ARG ARG B . n B 2 118 ALA 118 118 118 ALA ALA B . n B 2 119 GLN 119 119 119 GLN GLN B . n B 2 120 LEU 120 120 120 LEU LEU B . n B 2 121 LYS 121 121 121 LYS LYS B . n B 2 122 ILE 122 122 122 ILE ILE B . n B 2 123 SER 123 123 123 SER SER B . n B 2 124 ASP 124 124 124 ASP ASP B . n B 2 125 THR 125 125 125 THR THR B . n B 2 126 LEU 126 126 126 LEU LEU B . n B 2 127 ILE 127 127 127 ILE ILE B . n B 2 128 PRO 128 128 128 PRO PRO B . n B 2 129 TRP 129 129 129 TRP TRP B . n B 2 130 ALA 130 130 130 ALA ALA B . n B 2 131 SER 131 131 131 SER SER B . n B 2 132 LEU 132 132 132 LEU LEU B . n B 2 133 TRP 133 133 133 TRP TRP B . n B 2 134 LEU 134 134 134 LEU LEU B . n B 2 135 PHE 135 135 135 PHE PHE B . n B 2 136 TYR 136 136 136 TYR TYR B . n B 2 137 PHE 137 137 137 PHE PHE B . n B 2 138 GLU 138 138 138 GLU GLU B . n B 2 139 GLN 139 139 139 GLN GLN B . n B 2 140 TRP 140 140 140 TRP TRP B . n B 2 141 LEU 141 141 141 LEU LEU B . n B 2 142 HIS 142 142 142 HIS HIS B . n B 2 143 THR 143 143 143 THR THR B . n B 2 144 GLY 144 144 144 GLY GLY B . n B 2 145 HIS 145 145 145 HIS HIS B . n B 2 146 TRP 146 146 146 TRP TRP B . n B 2 147 GLU 147 147 147 GLU GLU B . n B 2 148 GLY 148 148 148 GLY GLY B . n B 2 149 GLY 149 149 149 GLY GLY B . n B 2 150 GLY 150 150 150 GLY GLY B . n B 2 151 LYS 151 151 151 LYS LYS B . n B 2 152 HIS 152 152 152 HIS HIS B . n B 2 153 PRO 153 153 153 PRO PRO B . n B 2 154 ARG 154 154 154 ARG ARG B . n B 2 155 PRO 155 155 155 PRO PRO B . n B 2 156 SER 156 156 156 SER SER B . n B 2 157 GLU 157 157 157 GLU GLU B . n B 2 158 VAL 158 158 158 VAL VAL B . n B 2 159 LYS 159 159 159 LYS LYS B . n B 2 160 ASN 160 160 160 ASN ASN B . n B 2 161 GLU 161 161 ? ? ? B . n B 2 162 ARG 162 162 ? ? ? B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YJY _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 8YJY _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.003 ? 4365 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.670 ? 5939 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 4.741 ? 580 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.041 ? 647 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.008 ? 770 ? f_plane_restr ? ? # _struct.entry_id 8YJY _struct.title 'Cryo-EM Structure of CdnG-E2 complex from Serratia marcescens' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YJY _struct_keywords.text 'cGAS, CdnG, E2, CBASS, ANTIVIRAL PROTEIN' _struct_keywords.pdbx_keywords 'ANTIVIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 8YJY 8YJY ? 1 ? 1 2 UNP A0A0P0QAP1_SERMA A0A0P0QAP1 ? 2 ;MNNVVIRHHCKPLTIAQQYRALKAGGPYERLRIIHHDRTLLWEGWLQPSVFSRRYRVAVRYSLGTPPICVVTEPDLFTLA GTRAIPHLYPADKHIPGARLCLFLPRSQADDGLSEWRAQLKISDTLIPWASLWLFYFEQWLYTGHWEGGGKHPRTSEVKN ER ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8YJY A 1 ? 407 ? 8YJY 1 ? 407 ? 1 407 2 2 8YJY B 1 ? 162 ? A0A0P0QAP1 1 ? 162 ? 1 162 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 8YJY LEU B 50 ? UNP A0A0P0QAP1 VAL 50 conflict 50 1 2 8YJY LYS B 56 ? UNP A0A0P0QAP1 ARG 56 conflict 56 2 2 8YJY ALA B 78 ? UNP A0A0P0QAP1 THR 78 conflict 78 3 2 8YJY HIS B 142 ? UNP A0A0P0QAP1 TYR 142 conflict 142 4 2 8YJY PRO B 155 ? UNP A0A0P0QAP1 THR 155 conflict 155 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 11 ? ASP A 30 ? PRO A 11 ASP A 30 1 ? 20 HELX_P HELX_P2 AA2 THR A 32 ? GLU A 52 ? THR A 32 GLU A 52 1 ? 21 HELX_P HELX_P3 AA3 GLY A 67 ? ASN A 72 ? GLY A 67 ASN A 72 1 ? 6 HELX_P HELX_P4 AA4 LEU A 91 ? THR A 95 ? LEU A 91 THR A 95 5 ? 5 HELX_P HELX_P5 AA5 ASP A 98 ? HIS A 113 ? ASP A 98 HIS A 113 1 ? 16 HELX_P HELX_P6 AA6 HIS A 113 ? LEU A 119 ? HIS A 113 LEU A 119 1 ? 7 HELX_P HELX_P7 AA7 ASN A 168 ? VAL A 182 ? ASN A 168 VAL A 182 1 ? 15 HELX_P HELX_P8 AA8 LYS A 212 ? GLN A 232 ? LYS A 212 GLN A 232 1 ? 21 HELX_P HELX_P9 AA9 ASP A 233 ? CYS A 239 ? ASP A 233 CYS A 239 1 ? 7 HELX_P HELX_P10 AB1 ILE A 242 ? ARG A 261 ? ILE A 242 ARG A 261 1 ? 20 HELX_P HELX_P11 AB2 ASN A 266 ? MET A 278 ? ASN A 266 MET A 278 1 ? 13 HELX_P HELX_P12 AB3 PRO A 279 ? ILE A 282 ? PRO A 279 ILE A 282 5 ? 4 HELX_P HELX_P13 AB4 ALA A 302 ? ARG A 307 ? ALA A 302 ARG A 307 1 ? 6 HELX_P HELX_P14 AB5 SER A 308 ? GLN A 310 ? SER A 308 GLN A 310 5 ? 3 HELX_P HELX_P15 AB6 ASP A 311 ? SER A 337 ? ASP A 311 SER A 337 1 ? 27 HELX_P HELX_P16 AB7 GLY A 339 ? GLY A 352 ? GLY A 339 GLY A 352 1 ? 14 HELX_P HELX_P17 AB8 GLY A 352 ? GLY A 374 ? GLY A 352 GLY A 374 1 ? 23 HELX_P HELX_P18 AB9 THR B 14 ? GLY B 25 ? THR B 14 GLY B 25 1 ? 12 HELX_P HELX_P19 AC1 LEU B 76 ? GLY B 81 ? LEU B 76 GLY B 81 1 ? 6 HELX_P HELX_P20 AC2 LYS B 121 ? LEU B 141 ? LYS B 121 LEU B 141 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLU _struct_mon_prot_cis.label_seq_id 73 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLU _struct_mon_prot_cis.auth_seq_id 73 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 74 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 74 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.24 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 3 ? AA3 ? 2 ? AA4 ? 2 ? AA5 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 62 ? GLN A 66 ? VAL A 62 GLN A 66 AA1 2 ASP A 86 ? TYR A 90 ? ASP A 86 TYR A 90 AA1 3 LEU A 137 ? THR A 140 ? LEU A 137 THR A 140 AA1 4 PHE A 127 ? ILE A 129 ? PHE A 127 ILE A 129 AA1 5 LEU A 120 ? GLU A 122 ? LEU A 120 GLU A 122 AA2 1 GLY A 142 ? ASP A 144 ? GLY A 142 ASP A 144 AA2 2 LEU A 155 ? VAL A 157 ? LEU A 155 VAL A 157 AA2 3 LYS A 165 ? SER A 167 ? LYS A 165 SER A 167 AA3 1 VAL A 283 ? THR A 285 ? VAL A 283 THR A 285 AA3 2 ALA A 288 ? HIS A 290 ? ALA A 288 HIS A 290 AA4 1 HIS A 377 ? LEU A 378 ? HIS A 377 LEU A 378 AA4 2 LEU A 385 ? ILE A 386 ? LEU A 385 ILE A 386 AA5 1 ARG B 30 ? ILE B 34 ? ARG B 30 ILE B 34 AA5 2 THR B 39 ? LEU B 46 ? THR B 39 LEU B 46 AA5 3 TYR B 55 ? SER B 62 ? TYR B 55 SER B 62 AA5 4 THR B 65 ? VAL B 71 ? THR B 65 VAL B 71 AA5 5 ALA B 98 ? LEU B 100 ? ALA B 98 LEU B 100 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 62 ? N VAL A 62 O TYR A 90 ? O TYR A 90 AA1 2 3 N LEU A 87 ? N LEU A 87 O ASP A 138 ? O ASP A 138 AA1 3 4 O ILE A 139 ? O ILE A 139 N PHE A 127 ? N PHE A 127 AA1 4 5 O ARG A 128 ? O ARG A 128 N SER A 121 ? N SER A 121 AA2 1 2 N ARG A 143 ? N ARG A 143 O TRP A 156 ? O TRP A 156 AA2 2 3 N VAL A 157 ? N VAL A 157 O LYS A 165 ? O LYS A 165 AA3 1 2 N VAL A 283 ? N VAL A 283 O HIS A 290 ? O HIS A 290 AA4 1 2 N HIS A 377 ? N HIS A 377 O ILE A 386 ? O ILE A 386 AA5 1 2 N ILE B 34 ? N ILE B 34 O THR B 39 ? O THR B 39 AA5 2 3 N LEU B 46 ? N LEU B 46 O TYR B 55 ? O TYR B 55 AA5 3 4 N ALA B 58 ? N ALA B 58 O VAL B 70 ? O VAL B 70 AA5 4 5 N CYS B 69 ? N CYS B 69 O LEU B 100 ? O LEU B 100 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B GLN 139 ? ? OG1 B THR 143 ? ? 2.17 2 1 OG1 B THR 14 ? ? OE1 B GLN 17 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 PRO _pdbx_validate_rmsd_angle.auth_seq_id_1 12 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 N _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 PRO _pdbx_validate_rmsd_angle.auth_seq_id_2 12 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CD _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 PRO _pdbx_validate_rmsd_angle.auth_seq_id_3 12 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 97.35 _pdbx_validate_rmsd_angle.angle_target_value 111.70 _pdbx_validate_rmsd_angle.angle_deviation -14.35 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.40 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 153 ? ? 62.16 60.05 2 1 ALA A 163 ? ? 72.13 -12.74 3 1 ASN A 168 ? ? -156.54 83.56 4 1 LEU B 76 ? ? 73.80 -12.11 5 1 HIS B 142 ? ? 69.37 -4.30 6 1 PRO B 153 ? ? -69.97 79.29 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8YJY _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8YJY _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.3 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 263744 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'CdnG-E2 binary complex' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list '1, 2' # _em_imaging.entry_id 8YJY _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 3000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8YJY _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8YJY _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A TYR 2 ? A TYR 2 3 1 Y 1 A GLY 3 ? A GLY 3 4 1 Y 1 A SER 4 ? A SER 4 5 1 Y 1 A MET 191 ? A MET 191 6 1 Y 1 A ASP 192 ? A ASP 192 7 1 Y 1 A SER 193 ? A SER 193 8 1 Y 1 A ALA 194 ? A ALA 194 9 1 Y 1 A SER 195 ? A SER 195 10 1 Y 1 A ARG 196 ? A ARG 196 11 1 Y 1 A VAL 197 ? A VAL 197 12 1 Y 1 A GLY 198 ? A GLY 198 13 1 Y 1 A THR 199 ? A THR 199 14 1 Y 1 A GLU 200 ? A GLU 200 15 1 Y 1 A ALA 201 ? A ALA 201 16 1 Y 1 A LEU 202 ? A LEU 202 17 1 Y 1 A LEU 203 ? A LEU 203 18 1 Y 1 A PRO 204 ? A PRO 204 19 1 Y 1 A LEU 205 ? A LEU 205 20 1 Y 1 A PRO 206 ? A PRO 206 21 1 Y 1 A ASP 207 ? A ASP 207 22 1 Y 1 A SER 208 ? A SER 208 23 1 Y 1 A THR 209 ? A THR 209 24 1 Y 1 A ASP 210 ? A ASP 210 25 1 Y 1 A GLY 389 ? A GLY 389 26 1 Y 1 A LEU 390 ? A LEU 390 27 1 Y 1 A ALA 391 ? A ALA 391 28 1 Y 1 A GLY 392 ? A GLY 392 29 1 Y 1 A THR 393 ? A THR 393 30 1 Y 1 A ALA 394 ? A ALA 394 31 1 Y 1 A ALA 395 ? A ALA 395 32 1 Y 1 A GLN 396 ? A GLN 396 33 1 Y 1 A GLY 406 ? A GLY 406 34 1 Y 1 A GLU 407 ? A GLU 407 35 1 Y 1 B MET 1 ? B MET 1 36 1 Y 1 B ASN 2 ? B ASN 2 37 1 Y 1 B ASN 3 ? B ASN 3 38 1 Y 1 B GLU 161 ? B GLU 161 39 1 Y 1 B ARG 162 ? B ARG 162 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 615 _em_entity_assembly_naturalsource.organism 'Serratia marcescens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 562 _em_entity_assembly_recombinant.organism 'Escherichia coli' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 8YJY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #