data_8YSG # _entry.id 8YSG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YSG pdb_00008ysg 10.2210/pdb8ysg/pdb WWPDB D_1300046293 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-01-29 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YSG _pdbx_database_status.recvd_initial_deposition_date 2024-03-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email chyeah6599@nchu.edu.tw _pdbx_contact_author.name_first Yeh _pdbx_contact_author.name_last Chen _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-7740-0446 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Wang, Y.-C.' 1 ? 'Yang, C.-S.' 2 ? 'Hou, M.-H.' 3 ? 'Chen, Y.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Int.J.Biol.Macromol. _citation.journal_id_ASTM IJBMDR _citation.journal_id_CSD 0708 _citation.journal_id_ISSN 0141-8130 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 295 _citation.language ? _citation.page_first 139534 _citation.page_last 139534 _citation.title 'Structural insights into signaling promiscuity of the CBASS anti-phage defense system from a radiation-resistant bacterium.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ijbiomac.2025.139534 _citation.pdbx_database_id_PubMed 39761885 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, C.S.' 1 ? primary 'Shie, M.Y.' 2 ? primary 'Huang, S.W.' 3 ? primary 'Wang, Y.C.' 4 ? primary 'Hou, M.H.' 5 ? primary 'Chen, C.J.' 6 ? primary 'Chen, Y.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Nucleotidyltransferase 39217.918 1 ? ? ? ? 2 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 water nat water 18.015 111 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MAPVQKQFREFHDRIKLAQYDENQTLRDERDAVLTAVREGLKKVFADRGEAAPTFTPFNQGSYAMNTGVKPLEGGEYDID VGIILNIAKDDHDPVEVKKWIRDALKDYGNGAEIRRSCVTVFKPGYHVDLAVYADPELSGGTLCIAKGKENSGDEHRLWQ ISDPQGFQDRIASKLSGDDAAQFRRCIRYLKRWRDFRFSSDGNAAPLGIGLTAAAYWWFQVSKRTDPVSQNVTYDDRDAL EQFVQTMLDNFHDTWDSKDQRSYPRLTVELPVQPYNDVFEKMTGMQMESFKSKLQALLNALKTAKSRLELHDACKALADH FGSEFPVPEKDKSAVHTAPAIVGSGSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;MAPVQKQFREFHDRIKLAQYDENQTLRDERDAVLTAVREGLKKVFADRGEAAPTFTPFNQGSYAMNTGVKPLEGGEYDID VGIILNIAKDDHDPVEVKKWIRDALKDYGNGAEIRRSCVTVFKPGYHVDLAVYADPELSGGTLCIAKGKENSGDEHRLWQ ISDPQGFQDRIASKLSGDDAAQFRRCIRYLKRWRDFRFSSDGNAAPLGIGLTAAAYWWFQVSKRTDPVSQNVTYDDRDAL EQFVQTMLDNFHDTWDSKDQRSYPRLTVELPVQPYNDVFEKMTGMQMESFKSKLQALLNALKTAKSRLELHDACKALADH FGSEFPVPEKDKSAVHTAPAIVGSGSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-TRIPHOSPHATE" GTP 3 'MAGNESIUM ION' MG 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 PRO n 1 4 VAL n 1 5 GLN n 1 6 LYS n 1 7 GLN n 1 8 PHE n 1 9 ARG n 1 10 GLU n 1 11 PHE n 1 12 HIS n 1 13 ASP n 1 14 ARG n 1 15 ILE n 1 16 LYS n 1 17 LEU n 1 18 ALA n 1 19 GLN n 1 20 TYR n 1 21 ASP n 1 22 GLU n 1 23 ASN n 1 24 GLN n 1 25 THR n 1 26 LEU n 1 27 ARG n 1 28 ASP n 1 29 GLU n 1 30 ARG n 1 31 ASP n 1 32 ALA n 1 33 VAL n 1 34 LEU n 1 35 THR n 1 36 ALA n 1 37 VAL n 1 38 ARG n 1 39 GLU n 1 40 GLY n 1 41 LEU n 1 42 LYS n 1 43 LYS n 1 44 VAL n 1 45 PHE n 1 46 ALA n 1 47 ASP n 1 48 ARG n 1 49 GLY n 1 50 GLU n 1 51 ALA n 1 52 ALA n 1 53 PRO n 1 54 THR n 1 55 PHE n 1 56 THR n 1 57 PRO n 1 58 PHE n 1 59 ASN n 1 60 GLN n 1 61 GLY n 1 62 SER n 1 63 TYR n 1 64 ALA n 1 65 MET n 1 66 ASN n 1 67 THR n 1 68 GLY n 1 69 VAL n 1 70 LYS n 1 71 PRO n 1 72 LEU n 1 73 GLU n 1 74 GLY n 1 75 GLY n 1 76 GLU n 1 77 TYR n 1 78 ASP n 1 79 ILE n 1 80 ASP n 1 81 VAL n 1 82 GLY n 1 83 ILE n 1 84 ILE n 1 85 LEU n 1 86 ASN n 1 87 ILE n 1 88 ALA n 1 89 LYS n 1 90 ASP n 1 91 ASP n 1 92 HIS n 1 93 ASP n 1 94 PRO n 1 95 VAL n 1 96 GLU n 1 97 VAL n 1 98 LYS n 1 99 LYS n 1 100 TRP n 1 101 ILE n 1 102 ARG n 1 103 ASP n 1 104 ALA n 1 105 LEU n 1 106 LYS n 1 107 ASP n 1 108 TYR n 1 109 GLY n 1 110 ASN n 1 111 GLY n 1 112 ALA n 1 113 GLU n 1 114 ILE n 1 115 ARG n 1 116 ARG n 1 117 SER n 1 118 CYS n 1 119 VAL n 1 120 THR n 1 121 VAL n 1 122 PHE n 1 123 LYS n 1 124 PRO n 1 125 GLY n 1 126 TYR n 1 127 HIS n 1 128 VAL n 1 129 ASP n 1 130 LEU n 1 131 ALA n 1 132 VAL n 1 133 TYR n 1 134 ALA n 1 135 ASP n 1 136 PRO n 1 137 GLU n 1 138 LEU n 1 139 SER n 1 140 GLY n 1 141 GLY n 1 142 THR n 1 143 LEU n 1 144 CYS n 1 145 ILE n 1 146 ALA n 1 147 LYS n 1 148 GLY n 1 149 LYS n 1 150 GLU n 1 151 ASN n 1 152 SER n 1 153 GLY n 1 154 ASP n 1 155 GLU n 1 156 HIS n 1 157 ARG n 1 158 LEU n 1 159 TRP n 1 160 GLN n 1 161 ILE n 1 162 SER n 1 163 ASP n 1 164 PRO n 1 165 GLN n 1 166 GLY n 1 167 PHE n 1 168 GLN n 1 169 ASP n 1 170 ARG n 1 171 ILE n 1 172 ALA n 1 173 SER n 1 174 LYS n 1 175 LEU n 1 176 SER n 1 177 GLY n 1 178 ASP n 1 179 ASP n 1 180 ALA n 1 181 ALA n 1 182 GLN n 1 183 PHE n 1 184 ARG n 1 185 ARG n 1 186 CYS n 1 187 ILE n 1 188 ARG n 1 189 TYR n 1 190 LEU n 1 191 LYS n 1 192 ARG n 1 193 TRP n 1 194 ARG n 1 195 ASP n 1 196 PHE n 1 197 ARG n 1 198 PHE n 1 199 SER n 1 200 SER n 1 201 ASP n 1 202 GLY n 1 203 ASN n 1 204 ALA n 1 205 ALA n 1 206 PRO n 1 207 LEU n 1 208 GLY n 1 209 ILE n 1 210 GLY n 1 211 LEU n 1 212 THR n 1 213 ALA n 1 214 ALA n 1 215 ALA n 1 216 TYR n 1 217 TRP n 1 218 TRP n 1 219 PHE n 1 220 GLN n 1 221 VAL n 1 222 SER n 1 223 LYS n 1 224 ARG n 1 225 THR n 1 226 ASP n 1 227 PRO n 1 228 VAL n 1 229 SER n 1 230 GLN n 1 231 ASN n 1 232 VAL n 1 233 THR n 1 234 TYR n 1 235 ASP n 1 236 ASP n 1 237 ARG n 1 238 ASP n 1 239 ALA n 1 240 LEU n 1 241 GLU n 1 242 GLN n 1 243 PHE n 1 244 VAL n 1 245 GLN n 1 246 THR n 1 247 MET n 1 248 LEU n 1 249 ASP n 1 250 ASN n 1 251 PHE n 1 252 HIS n 1 253 ASP n 1 254 THR n 1 255 TRP n 1 256 ASP n 1 257 SER n 1 258 LYS n 1 259 ASP n 1 260 GLN n 1 261 ARG n 1 262 SER n 1 263 TYR n 1 264 PRO n 1 265 ARG n 1 266 LEU n 1 267 THR n 1 268 VAL n 1 269 GLU n 1 270 LEU n 1 271 PRO n 1 272 VAL n 1 273 GLN n 1 274 PRO n 1 275 TYR n 1 276 ASN n 1 277 ASP n 1 278 VAL n 1 279 PHE n 1 280 GLU n 1 281 LYS n 1 282 MET n 1 283 THR n 1 284 GLY n 1 285 MET n 1 286 GLN n 1 287 MET n 1 288 GLU n 1 289 SER n 1 290 PHE n 1 291 LYS n 1 292 SER n 1 293 LYS n 1 294 LEU n 1 295 GLN n 1 296 ALA n 1 297 LEU n 1 298 LEU n 1 299 ASN n 1 300 ALA n 1 301 LEU n 1 302 LYS n 1 303 THR n 1 304 ALA n 1 305 LYS n 1 306 SER n 1 307 ARG n 1 308 LEU n 1 309 GLU n 1 310 LEU n 1 311 HIS n 1 312 ASP n 1 313 ALA n 1 314 CYS n 1 315 LYS n 1 316 ALA n 1 317 LEU n 1 318 ALA n 1 319 ASP n 1 320 HIS n 1 321 PHE n 1 322 GLY n 1 323 SER n 1 324 GLU n 1 325 PHE n 1 326 PRO n 1 327 VAL n 1 328 PRO n 1 329 GLU n 1 330 LYS n 1 331 ASP n 1 332 LYS n 1 333 SER n 1 334 ALA n 1 335 VAL n 1 336 HIS n 1 337 THR n 1 338 ALA n 1 339 PRO n 1 340 ALA n 1 341 ILE n 1 342 VAL n 1 343 GLY n 1 344 SER n 1 345 GLY n 1 346 SER n 1 347 SER n 1 348 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 348 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DVJ83_15700 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Deinococcus wulumuqiensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 980427 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 PRO 3 3 ? ? ? A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 ARG 9 9 9 ARG ARG A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 LEU 26 26 26 LEU LEU A . n A 1 27 ARG 27 27 27 ARG ARG A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ARG 38 38 38 ARG ARG A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 LYS 43 43 43 LYS LYS A . n A 1 44 VAL 44 44 44 VAL VAL A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ARG 48 48 48 ARG ARG A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 THR 54 54 54 THR THR A . n A 1 55 PHE 55 55 55 PHE PHE A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 PHE 58 58 58 PHE PHE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 THR 67 67 67 THR THR A . n A 1 68 GLY 68 68 68 GLY GLY A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 GLU 73 73 73 GLU GLU A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 ILE 79 79 79 ILE ILE A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 VAL 81 81 81 VAL VAL A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 LEU 85 85 85 LEU LEU A . n A 1 86 ASN 86 86 86 ASN ASN A . n A 1 87 ILE 87 87 87 ILE ILE A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ASP 90 90 90 ASP ASP A . n A 1 91 ASP 91 91 91 ASP ASP A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 PRO 94 94 94 PRO PRO A . n A 1 95 VAL 95 95 95 VAL VAL A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 TRP 100 100 100 TRP TRP A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ARG 102 102 102 ARG ARG A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 TYR 108 108 108 TYR TYR A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 GLY 111 111 111 GLY GLY A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 GLU 113 113 113 GLU GLU A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 SER 117 117 117 SER SER A . n A 1 118 CYS 118 118 118 CYS CYS A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 THR 120 120 120 THR THR A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 PHE 122 122 122 PHE PHE A . n A 1 123 LYS 123 123 123 LYS LYS A . n A 1 124 PRO 124 124 124 PRO PRO A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 TYR 126 126 126 TYR TYR A . n A 1 127 HIS 127 127 127 HIS HIS A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 TYR 133 133 133 TYR TYR A . n A 1 134 ALA 134 134 134 ALA ALA A . n A 1 135 ASP 135 135 135 ASP ASP A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 SER 139 139 139 SER SER A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 GLY 141 141 141 GLY GLY A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 CYS 144 144 144 CYS CYS A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LYS 147 147 147 LYS LYS A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 SER 152 152 152 SER SER A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 HIS 156 156 156 HIS HIS A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 TRP 159 159 159 TRP TRP A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 SER 162 162 162 SER SER A . n A 1 163 ASP 163 163 163 ASP ASP A . n A 1 164 PRO 164 164 164 PRO PRO A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 PHE 167 167 167 PHE PHE A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 ASP 169 169 169 ASP ASP A . n A 1 170 ARG 170 170 170 ARG ARG A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 SER 173 173 173 SER SER A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 SER 176 176 176 SER SER A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 ASP 178 178 178 ASP ASP A . n A 1 179 ASP 179 179 179 ASP ASP A . n A 1 180 ALA 180 180 180 ALA ALA A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 GLN 182 182 182 GLN GLN A . n A 1 183 PHE 183 183 183 PHE PHE A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 ARG 185 185 185 ARG ARG A . n A 1 186 CYS 186 186 186 CYS CYS A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 ARG 192 192 192 ARG ARG A . n A 1 193 TRP 193 193 193 TRP TRP A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 ASP 195 195 195 ASP ASP A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 ARG 197 197 197 ARG ARG A . n A 1 198 PHE 198 198 198 PHE PHE A . n A 1 199 SER 199 199 ? ? ? A . n A 1 200 SER 200 200 ? ? ? A . n A 1 201 ASP 201 201 ? ? ? A . n A 1 202 GLY 202 202 ? ? ? A . n A 1 203 ASN 203 203 ? ? ? A . n A 1 204 ALA 204 204 ? ? ? A . n A 1 205 ALA 205 205 ? ? ? A . n A 1 206 PRO 206 206 206 PRO PRO A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 GLY 208 208 208 GLY GLY A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 GLY 210 210 210 GLY GLY A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 THR 212 212 212 THR THR A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 TYR 216 216 216 TYR TYR A . n A 1 217 TRP 217 217 217 TRP TRP A . n A 1 218 TRP 218 218 218 TRP TRP A . n A 1 219 PHE 219 219 219 PHE PHE A . n A 1 220 GLN 220 220 220 GLN GLN A . n A 1 221 VAL 221 221 221 VAL VAL A . n A 1 222 SER 222 222 222 SER SER A . n A 1 223 LYS 223 223 223 LYS LYS A . n A 1 224 ARG 224 224 224 ARG ARG A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 PRO 227 227 227 PRO PRO A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 GLN 230 230 230 GLN GLN A . n A 1 231 ASN 231 231 231 ASN ASN A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 THR 233 233 233 THR THR A . n A 1 234 TYR 234 234 234 TYR TYR A . n A 1 235 ASP 235 235 235 ASP ASP A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 ASP 238 238 238 ASP ASP A . n A 1 239 ALA 239 239 239 ALA ALA A . n A 1 240 LEU 240 240 240 LEU LEU A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 GLN 242 242 242 GLN GLN A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 GLN 245 245 245 GLN GLN A . n A 1 246 THR 246 246 246 THR THR A . n A 1 247 MET 247 247 247 MET MET A . n A 1 248 LEU 248 248 248 LEU LEU A . n A 1 249 ASP 249 249 249 ASP ASP A . n A 1 250 ASN 250 250 250 ASN ASN A . n A 1 251 PHE 251 251 251 PHE PHE A . n A 1 252 HIS 252 252 252 HIS HIS A . n A 1 253 ASP 253 253 253 ASP ASP A . n A 1 254 THR 254 254 254 THR THR A . n A 1 255 TRP 255 255 255 TRP TRP A . n A 1 256 ASP 256 256 256 ASP ASP A . n A 1 257 SER 257 257 257 SER SER A . n A 1 258 LYS 258 258 258 LYS LYS A . n A 1 259 ASP 259 259 259 ASP ASP A . n A 1 260 GLN 260 260 260 GLN GLN A . n A 1 261 ARG 261 261 261 ARG ARG A . n A 1 262 SER 262 262 262 SER SER A . n A 1 263 TYR 263 263 263 TYR TYR A . n A 1 264 PRO 264 264 264 PRO PRO A . n A 1 265 ARG 265 265 265 ARG ARG A . n A 1 266 LEU 266 266 266 LEU LEU A . n A 1 267 THR 267 267 267 THR THR A . n A 1 268 VAL 268 268 268 VAL VAL A . n A 1 269 GLU 269 269 269 GLU GLU A . n A 1 270 LEU 270 270 270 LEU LEU A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 VAL 272 272 272 VAL VAL A . n A 1 273 GLN 273 273 273 GLN GLN A . n A 1 274 PRO 274 274 274 PRO PRO A . n A 1 275 TYR 275 275 275 TYR TYR A . n A 1 276 ASN 276 276 276 ASN ASN A . n A 1 277 ASP 277 277 277 ASP ASP A . n A 1 278 VAL 278 278 278 VAL VAL A . n A 1 279 PHE 279 279 279 PHE PHE A . n A 1 280 GLU 280 280 280 GLU GLU A . n A 1 281 LYS 281 281 281 LYS LYS A . n A 1 282 MET 282 282 282 MET MET A . n A 1 283 THR 283 283 283 THR THR A . n A 1 284 GLY 284 284 284 GLY GLY A . n A 1 285 MET 285 285 285 MET MET A . n A 1 286 GLN 286 286 286 GLN GLN A . n A 1 287 MET 287 287 287 MET MET A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 SER 289 289 289 SER SER A . n A 1 290 PHE 290 290 290 PHE PHE A . n A 1 291 LYS 291 291 291 LYS LYS A . n A 1 292 SER 292 292 292 SER SER A . n A 1 293 LYS 293 293 293 LYS LYS A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 GLN 295 295 295 GLN GLN A . n A 1 296 ALA 296 296 296 ALA ALA A . n A 1 297 LEU 297 297 297 LEU LEU A . n A 1 298 LEU 298 298 298 LEU LEU A . n A 1 299 ASN 299 299 299 ASN ASN A . n A 1 300 ALA 300 300 300 ALA ALA A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 LYS 302 302 302 LYS LYS A . n A 1 303 THR 303 303 303 THR THR A . n A 1 304 ALA 304 304 304 ALA ALA A . n A 1 305 LYS 305 305 305 LYS LYS A . n A 1 306 SER 306 306 306 SER SER A . n A 1 307 ARG 307 307 307 ARG ARG A . n A 1 308 LEU 308 308 308 LEU LEU A . n A 1 309 GLU 309 309 309 GLU GLU A . n A 1 310 LEU 310 310 310 LEU LEU A . n A 1 311 HIS 311 311 311 HIS HIS A . n A 1 312 ASP 312 312 312 ASP ASP A . n A 1 313 ALA 313 313 313 ALA ALA A . n A 1 314 CYS 314 314 314 CYS CYS A . n A 1 315 LYS 315 315 315 LYS LYS A . n A 1 316 ALA 316 316 316 ALA ALA A . n A 1 317 LEU 317 317 317 LEU LEU A . n A 1 318 ALA 318 318 318 ALA ALA A . n A 1 319 ASP 319 319 319 ASP ASP A . n A 1 320 HIS 320 320 320 HIS HIS A . n A 1 321 PHE 321 321 321 PHE PHE A . n A 1 322 GLY 322 322 322 GLY GLY A . n A 1 323 SER 323 323 323 SER SER A . n A 1 324 GLU 324 324 324 GLU GLU A . n A 1 325 PHE 325 325 325 PHE PHE A . n A 1 326 PRO 326 326 326 PRO PRO A . n A 1 327 VAL 327 327 327 VAL VAL A . n A 1 328 PRO 328 328 328 PRO PRO A . n A 1 329 GLU 329 329 329 GLU GLU A . n A 1 330 LYS 330 330 330 LYS LYS A . n A 1 331 ASP 331 331 ? ? ? A . n A 1 332 LYS 332 332 ? ? ? A . n A 1 333 SER 333 333 ? ? ? A . n A 1 334 ALA 334 334 ? ? ? A . n A 1 335 VAL 335 335 ? ? ? A . n A 1 336 HIS 336 336 ? ? ? A . n A 1 337 THR 337 337 ? ? ? A . n A 1 338 ALA 338 338 ? ? ? A . n A 1 339 PRO 339 339 ? ? ? A . n A 1 340 ALA 340 340 ? ? ? A . n A 1 341 ILE 341 341 ? ? ? A . n A 1 342 VAL 342 342 ? ? ? A . n A 1 343 GLY 343 343 ? ? ? A . n A 1 344 SER 344 344 ? ? ? A . n A 1 345 GLY 345 345 ? ? ? A . n A 1 346 SER 346 346 ? ? ? A . n A 1 347 SER 347 347 ? ? ? A . n A 1 348 GLY 348 348 ? ? ? A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id GTP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id GTP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GTP 1 401 360 GTP GTP A . C 2 GTP 1 402 361 GTP GTP A . D 3 MG 1 403 380 MG MG A . E 3 MG 1 404 381 MG MG A . F 4 HOH 1 501 441 HOH HOH A . F 4 HOH 2 502 449 HOH HOH A . F 4 HOH 3 503 500 HOH HOH A . F 4 HOH 4 504 403 HOH HOH A . F 4 HOH 5 505 506 HOH HOH A . F 4 HOH 6 506 413 HOH HOH A . F 4 HOH 7 507 482 HOH HOH A . F 4 HOH 8 508 425 HOH HOH A . F 4 HOH 9 509 444 HOH HOH A . F 4 HOH 10 510 400 HOH HOH A . F 4 HOH 11 511 499 HOH HOH A . F 4 HOH 12 512 467 HOH HOH A . F 4 HOH 13 513 428 HOH HOH A . F 4 HOH 14 514 510 HOH HOH A . F 4 HOH 15 515 420 HOH HOH A . F 4 HOH 16 516 501 HOH HOH A . F 4 HOH 17 517 445 HOH HOH A . F 4 HOH 18 518 494 HOH HOH A . F 4 HOH 19 519 419 HOH HOH A . F 4 HOH 20 520 405 HOH HOH A . F 4 HOH 21 521 414 HOH HOH A . F 4 HOH 22 522 447 HOH HOH A . F 4 HOH 23 523 440 HOH HOH A . F 4 HOH 24 524 463 HOH HOH A . F 4 HOH 25 525 442 HOH HOH A . F 4 HOH 26 526 483 HOH HOH A . F 4 HOH 27 527 408 HOH HOH A . F 4 HOH 28 528 429 HOH HOH A . F 4 HOH 29 529 422 HOH HOH A . F 4 HOH 30 530 416 HOH HOH A . F 4 HOH 31 531 439 HOH HOH A . F 4 HOH 32 532 460 HOH HOH A . F 4 HOH 33 533 410 HOH HOH A . F 4 HOH 34 534 404 HOH HOH A . F 4 HOH 35 535 437 HOH HOH A . F 4 HOH 36 536 451 HOH HOH A . F 4 HOH 37 537 435 HOH HOH A . F 4 HOH 38 538 450 HOH HOH A . F 4 HOH 39 539 479 HOH HOH A . F 4 HOH 40 540 457 HOH HOH A . F 4 HOH 41 541 433 HOH HOH A . F 4 HOH 42 542 423 HOH HOH A . F 4 HOH 43 543 407 HOH HOH A . F 4 HOH 44 544 491 HOH HOH A . F 4 HOH 45 545 459 HOH HOH A . F 4 HOH 46 546 503 HOH HOH A . F 4 HOH 47 547 432 HOH HOH A . F 4 HOH 48 548 495 HOH HOH A . F 4 HOH 49 549 402 HOH HOH A . F 4 HOH 50 550 421 HOH HOH A . F 4 HOH 51 551 412 HOH HOH A . F 4 HOH 52 552 417 HOH HOH A . F 4 HOH 53 553 446 HOH HOH A . F 4 HOH 54 554 448 HOH HOH A . F 4 HOH 55 555 431 HOH HOH A . F 4 HOH 56 556 456 HOH HOH A . F 4 HOH 57 557 474 HOH HOH A . F 4 HOH 58 558 438 HOH HOH A . F 4 HOH 59 559 461 HOH HOH A . F 4 HOH 60 560 462 HOH HOH A . F 4 HOH 61 561 458 HOH HOH A . F 4 HOH 62 562 443 HOH HOH A . F 4 HOH 63 563 415 HOH HOH A . F 4 HOH 64 564 426 HOH HOH A . F 4 HOH 65 565 454 HOH HOH A . F 4 HOH 66 566 427 HOH HOH A . F 4 HOH 67 567 453 HOH HOH A . F 4 HOH 68 568 473 HOH HOH A . F 4 HOH 69 569 434 HOH HOH A . F 4 HOH 70 570 418 HOH HOH A . F 4 HOH 71 571 411 HOH HOH A . F 4 HOH 72 572 406 HOH HOH A . F 4 HOH 73 573 493 HOH HOH A . F 4 HOH 74 574 401 HOH HOH A . F 4 HOH 75 575 504 HOH HOH A . F 4 HOH 76 576 455 HOH HOH A . F 4 HOH 77 577 488 HOH HOH A . F 4 HOH 78 578 464 HOH HOH A . F 4 HOH 79 579 409 HOH HOH A . F 4 HOH 80 580 452 HOH HOH A . F 4 HOH 81 581 485 HOH HOH A . F 4 HOH 82 582 487 HOH HOH A . F 4 HOH 83 583 436 HOH HOH A . F 4 HOH 84 584 424 HOH HOH A . F 4 HOH 85 585 492 HOH HOH A . F 4 HOH 86 586 465 HOH HOH A . F 4 HOH 87 587 509 HOH HOH A . F 4 HOH 88 588 475 HOH HOH A . F 4 HOH 89 589 430 HOH HOH A . F 4 HOH 90 590 472 HOH HOH A . F 4 HOH 91 591 470 HOH HOH A . F 4 HOH 92 592 490 HOH HOH A . F 4 HOH 93 593 478 HOH HOH A . F 4 HOH 94 594 486 HOH HOH A . F 4 HOH 95 595 505 HOH HOH A . F 4 HOH 96 596 466 HOH HOH A . F 4 HOH 97 597 480 HOH HOH A . F 4 HOH 98 598 468 HOH HOH A . F 4 HOH 99 599 481 HOH HOH A . F 4 HOH 100 600 498 HOH HOH A . F 4 HOH 101 601 476 HOH HOH A . F 4 HOH 102 602 502 HOH HOH A . F 4 HOH 103 603 477 HOH HOH A . F 4 HOH 104 604 496 HOH HOH A . F 4 HOH 105 605 469 HOH HOH A . F 4 HOH 106 606 471 HOH HOH A . F 4 HOH 107 607 489 HOH HOH A . F 4 HOH 108 608 507 HOH HOH A . F 4 HOH 109 609 484 HOH HOH A . F 4 HOH 110 610 497 HOH HOH A . F 4 HOH 111 611 508 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0258 1 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? Blu-Ice ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 101.621 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8YSG _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.033 _cell.length_a_esd ? _cell.length_b 100.404 _cell.length_b_esd ? _cell.length_c 46.398 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YSG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.65 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2 M sodium formate, 20 % w/v PEG 3350' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 277 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER2 X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2021-05-11 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.99984 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSRRC BEAMLINE TPS 05A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.99984 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'TPS 05A' _diffrn_source.pdbx_synchrotron_site NSRRC # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8YSG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.17 _reflns.d_resolution_low 30 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16522 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 47.211 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.028 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.17 _reflns_shell.d_res_low 2.25 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1572 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.979 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.014 _refine.aniso_B[1][2] -0.000 _refine.aniso_B[1][3] -0.022 _refine.aniso_B[2][2] -0.079 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] 0.093 _refine.B_iso_max ? _refine.B_iso_mean 37.635 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.919 _refine.correlation_coeff_Fo_to_Fc_free 0.900 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8YSG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.171 _refine.ls_d_res_low 22.734 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16498 _refine.ls_number_reflns_R_free 824 _refine.ls_number_reflns_R_work 15674 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.356 _refine.ls_percent_reflns_R_free 4.995 _refine.ls_R_factor_all 0.243 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2718 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2417 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.413 _refine.pdbx_overall_ESU_R_Free 0.253 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.834 _refine.overall_SU_ML 0.217 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2585 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 111 _refine_hist.number_atoms_total 2762 _refine_hist.d_res_high 2.171 _refine_hist.d_res_low 22.734 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.013 2712 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 2424 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.393 1.654 3678 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.244 1.590 5628 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 8.126 5.000 318 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.299 22.037 162 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 17.559 15.000 457 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 18.475 15.000 22 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.060 0.200 339 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 3024 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.001 0.020 598 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.220 0.200 649 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.203 0.200 2453 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.170 0.200 1262 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.077 0.200 1242 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.207 0.200 120 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.168 0.200 3 ? r_symmetry_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.223 0.200 18 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.237 0.200 38 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.214 0.200 6 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 3.349 3.904 1278 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.341 3.903 1277 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.250 5.848 1594 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.249 5.849 1595 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.964 4.207 1434 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.960 4.204 1432 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 4.702 6.227 2084 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.701 6.231 2085 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 8.982 45.061 3134 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 8.982 45.045 3127 ? r_lrange_other ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.171 2.227 . . 49 1108 97.0638 . . . . 0.320 . . . . . . . . . . . 0.351 'X-RAY DIFFRACTION' 2.227 2.288 . . 62 1132 100.0000 . . . . 0.318 . . . . . . . . . . . 0.350 'X-RAY DIFFRACTION' 2.288 2.354 . . 71 1107 100.0000 . . . . 0.314 . . . . . . . . . . . 0.463 'X-RAY DIFFRACTION' 2.354 2.426 . . 42 1058 100.0000 . . . . 0.307 . . . . . . . . . . . 0.337 'X-RAY DIFFRACTION' 2.426 2.505 . . 59 1039 100.0000 . . . . 0.305 . . . . . . . . . . . 0.343 'X-RAY DIFFRACTION' 2.505 2.592 . . 53 988 100.0000 . . . . 0.312 . . . . . . . . . . . 0.315 'X-RAY DIFFRACTION' 2.592 2.689 . . 48 984 100.0000 . . . . 0.292 . . . . . . . . . . . 0.310 'X-RAY DIFFRACTION' 2.689 2.798 . . 52 916 100.0000 . . . . 0.264 . . . . . . . . . . . 0.282 'X-RAY DIFFRACTION' 2.798 2.921 . . 39 921 100.0000 . . . . 0.263 . . . . . . . . . . . 0.272 'X-RAY DIFFRACTION' 2.921 3.063 . . 49 831 99.8865 . . . . 0.255 . . . . . . . . . . . 0.286 'X-RAY DIFFRACTION' 3.063 3.226 . . 40 824 99.8844 . . . . 0.261 . . . . . . . . . . . 0.371 'X-RAY DIFFRACTION' 3.226 3.420 . . 41 763 100.0000 . . . . 0.248 . . . . . . . . . . . 0.228 'X-RAY DIFFRACTION' 3.420 3.652 . . 37 720 100.0000 . . . . 0.235 . . . . . . . . . . . 0.272 'X-RAY DIFFRACTION' 3.652 3.940 . . 44 682 100.0000 . . . . 0.214 . . . . . . . . . . . 0.228 'X-RAY DIFFRACTION' 3.940 4.309 . . 29 624 100.0000 . . . . 0.189 . . . . . . . . . . . 0.191 'X-RAY DIFFRACTION' 4.309 4.805 . . 28 565 100.0000 . . . . 0.166 . . . . . . . . . . . 0.172 'X-RAY DIFFRACTION' 4.805 5.525 . . 29 492 100.0000 . . . . 0.181 . . . . . . . . . . . 0.253 'X-RAY DIFFRACTION' 5.525 6.710 . . 21 437 99.7821 . . . . 0.194 . . . . . . . . . . . 0.262 'X-RAY DIFFRACTION' 6.710 9.260 . . 20 333 98.3287 . . . . 0.176 . . . . . . . . . . . 0.181 'X-RAY DIFFRACTION' 9.260 22.734 . . 11 150 74.1936 . . . . 0.201 . . . . . . . . . . . 0.225 # _struct.entry_id 8YSG _struct.title 'Crystal structure of the Deinococcus wulumuqiensis CD-NTase DwCdnB in complex with GTP' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YSG _struct_keywords.text 'CD-NTase, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A0A345ILN6_9DEIO _struct_ref.pdbx_db_accession A0A345ILN6 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAPVQKQFREFHDRIKLAQYDENQTLRDERDAVLTAVREGLKKVFADRGEAAPTFTPFNQGSYAMNTGVKPLEGGEYDID VGIILNIAKDDHDPVEVKKWIRDALKDYGNGAEIRRSCVTVFKPGYHVDLAVYADPELSGGTLCIAKGKENSGDEHRLWQ ISDPQGFQDRIASKLSGDDAAQFRRCIRYLKRWRDFRFSSDGNAAPLGIGLTAAAYWWFQVSKRTDPVSQNVTYDDRDAL EQFVQTMLDNFHDTWDSKDQRSYPRLTVELPVQPYNDVFEKMTGMQMESFKSKLQALLNALKTAKSRLELHDACKALADH FGSEFPVPEKDKSAVHTAPAIVGSGSSG ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8YSG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 348 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A0A345ILN6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 348 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 348 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0 _pdbx_struct_oper_list.matrix[1][2] 0.0 _pdbx_struct_oper_list.matrix[1][3] 0.0 _pdbx_struct_oper_list.vector[1] 0.0 _pdbx_struct_oper_list.matrix[2][1] 0.0 _pdbx_struct_oper_list.matrix[2][2] 1.0 _pdbx_struct_oper_list.matrix[2][3] 0.0 _pdbx_struct_oper_list.vector[2] 0.0 _pdbx_struct_oper_list.matrix[3][1] 0.0 _pdbx_struct_oper_list.matrix[3][2] 0.0 _pdbx_struct_oper_list.matrix[3][3] 1.0 _pdbx_struct_oper_list.vector[3] 0.0 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 VAL A 4 ? LYS A 16 ? VAL A 4 LYS A 16 1 ? 13 HELX_P HELX_P2 AA2 GLN A 19 ? GLU A 22 ? GLN A 19 GLU A 22 5 ? 4 HELX_P HELX_P3 AA3 ASN A 23 ? LYS A 43 ? ASN A 23 LYS A 43 1 ? 21 HELX_P HELX_P4 AA4 GLN A 60 ? ASN A 66 ? GLN A 60 ASN A 66 1 ? 7 HELX_P HELX_P5 AA5 ASP A 93 ? LYS A 106 ? ASP A 93 LYS A 106 1 ? 14 HELX_P HELX_P6 AA6 ASP A 163 ? LYS A 174 ? ASP A 163 LYS A 174 1 ? 12 HELX_P HELX_P7 AA7 SER A 176 ? PHE A 198 ? SER A 176 PHE A 198 1 ? 23 HELX_P HELX_P8 AA8 LEU A 207 ? PHE A 219 ? LEU A 207 PHE A 219 1 ? 13 HELX_P HELX_P9 AA9 ASP A 235 ? ASN A 250 ? ASP A 235 ASN A 250 1 ? 16 HELX_P HELX_P10 AB1 ASP A 277 ? MET A 282 ? ASP A 277 MET A 282 5 ? 6 HELX_P HELX_P11 AB2 THR A 283 ? ALA A 304 ? THR A 283 ALA A 304 1 ? 22 HELX_P HELX_P12 AB3 GLU A 309 ? GLY A 322 ? GLU A 309 GLY A 322 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 78 OD2 ? ? ? 1_555 D MG . MG ? ? A ASP 78 A MG 403 1_555 ? ? ? ? ? ? ? 2.320 ? ? metalc2 metalc ? ? A ASP 78 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 78 A MG 404 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc3 metalc ? ? A ASP 78 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 78 A MG 404 1_555 ? ? ? ? ? ? ? 2.583 ? ? metalc4 metalc ? ? A ASP 80 OD1 ? ? ? 1_555 D MG . MG ? ? A ASP 80 A MG 403 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc5 metalc ? ? A ASP 80 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 80 A MG 404 1_555 ? ? ? ? ? ? ? 2.634 ? ? metalc6 metalc ? ? A ASP 129 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 129 A MG 404 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc7 metalc ? ? B GTP . O2G ? ? ? 1_555 D MG . MG ? ? A GTP 401 A MG 403 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc8 metalc ? ? B GTP . O2B ? ? ? 1_555 D MG . MG ? ? A GTP 401 A MG 403 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc9 metalc ? ? B GTP . O1A ? ? ? 1_555 D MG . MG ? ? A GTP 401 A MG 403 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc10 metalc ? ? B GTP . O1A ? ? ? 1_555 E MG . MG ? ? A GTP 401 A MG 404 1_555 ? ? ? ? ? ? ? 2.873 ? ? metalc11 metalc ? ? C GTP . "O3'" ? ? ? 1_555 E MG . MG ? ? A GTP 402 A MG 404 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc12 metalc ? ? C GTP . "O2'" ? ? ? 1_555 E MG . MG ? ? A GTP 402 A MG 404 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc13 metalc ? ? D MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 403 A HOH 516 1_555 ? ? ? ? ? ? ? 2.128 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 OD1 ? A ASP 80 ? A ASP 80 ? 1_555 84.2 ? 2 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O2G ? B GTP . ? A GTP 401 ? 1_555 85.0 ? 3 OD1 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O2G ? B GTP . ? A GTP 401 ? 1_555 168.2 ? 4 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O2B ? B GTP . ? A GTP 401 ? 1_555 170.6 ? 5 OD1 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O2B ? B GTP . ? A GTP 401 ? 1_555 96.0 ? 6 O2G ? B GTP . ? A GTP 401 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O2B ? B GTP . ? A GTP 401 ? 1_555 93.9 ? 7 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 77.1 ? 8 OD1 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 88.7 ? 9 O2G ? B GTP . ? A GTP 401 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 84.4 ? 10 O2B ? B GTP . ? A GTP 401 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 93.5 ? 11 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 89.1 ? 12 OD1 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 97.6 ? 13 O2G ? B GTP . ? A GTP 401 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 86.8 ? 14 O2B ? B GTP . ? A GTP 401 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 100.1 ? 15 O1A ? B GTP . ? A GTP 401 ? 1_555 MG ? D MG . ? A MG 403 ? 1_555 O ? F HOH . ? A HOH 516 ? 1_555 164.2 ? 16 OD1 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 52.8 ? 17 OD1 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 OD2 ? A ASP 80 ? A ASP 80 ? 1_555 88.2 ? 18 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 OD2 ? A ASP 80 ? A ASP 80 ? 1_555 69.8 ? 19 OD1 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 OD2 ? A ASP 129 ? A ASP 129 ? 1_555 80.3 ? 20 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 OD2 ? A ASP 129 ? A ASP 129 ? 1_555 129.0 ? 21 OD2 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 OD2 ? A ASP 129 ? A ASP 129 ? 1_555 92.4 ? 22 OD1 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 114.4 ? 23 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 63.2 ? 24 OD2 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 82.8 ? 25 OD2 ? A ASP 129 ? A ASP 129 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 O1A ? B GTP . ? A GTP 401 ? 1_555 164.3 ? 26 OD1 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O3'" ? C GTP . ? A GTP 402 ? 1_555 124.1 ? 27 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O3'" ? C GTP . ? A GTP 402 ? 1_555 129.1 ? 28 OD2 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O3'" ? C GTP . ? A GTP 402 ? 1_555 147.6 ? 29 OD2 ? A ASP 129 ? A ASP 129 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O3'" ? C GTP . ? A GTP 402 ? 1_555 91.5 ? 30 O1A ? B GTP . ? A GTP 401 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O3'" ? C GTP . ? A GTP 402 ? 1_555 84.9 ? 31 OD1 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O2'" ? C GTP . ? A GTP 402 ? 1_555 166.4 ? 32 OD2 ? A ASP 78 ? A ASP 78 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O2'" ? C GTP . ? A GTP 402 ? 1_555 122.7 ? 33 OD2 ? A ASP 80 ? A ASP 80 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O2'" ? C GTP . ? A GTP 402 ? 1_555 78.4 ? 34 OD2 ? A ASP 129 ? A ASP 129 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O2'" ? C GTP . ? A GTP 402 ? 1_555 97.8 ? 35 O1A ? B GTP . ? A GTP 401 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O2'" ? C GTP . ? A GTP 402 ? 1_555 66.6 ? 36 "O3'" ? C GTP . ? A GTP 402 ? 1_555 MG ? E MG . ? A MG 404 ? 1_555 "O2'" ? C GTP . ? A GTP 402 ? 1_555 69.3 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 273 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 273 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 274 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 274 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.04 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 2 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 55 ? ASN A 59 ? PHE A 55 ASN A 59 AA1 2 TYR A 77 ? LEU A 85 ? TYR A 77 LEU A 85 AA1 3 TYR A 126 ? ALA A 134 ? TYR A 126 ALA A 134 AA1 4 CYS A 118 ? LYS A 123 ? CYS A 118 LYS A 123 AA1 5 ALA A 112 ? ARG A 115 ? ALA A 112 ARG A 115 AA2 1 PHE A 55 ? ASN A 59 ? PHE A 55 ASN A 59 AA2 2 TYR A 77 ? LEU A 85 ? TYR A 77 LEU A 85 AA2 3 TYR A 126 ? ALA A 134 ? TYR A 126 ALA A 134 AA2 4 CYS A 144 ? LYS A 147 ? CYS A 144 LYS A 147 AA2 5 LEU A 158 ? ILE A 161 ? LEU A 158 ILE A 161 AA3 1 LYS A 223 ? THR A 225 ? LYS A 223 THR A 225 AA3 2 VAL A 232 ? TYR A 234 ? VAL A 232 TYR A 234 AA4 1 HIS A 252 ? ASP A 256 ? HIS A 252 ASP A 256 AA4 2 ARG A 261 ? ARG A 265 ? ARG A 261 ARG A 265 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 56 ? N THR A 56 O ILE A 84 ? O ILE A 84 AA1 2 3 N ILE A 83 ? N ILE A 83 O TYR A 133 ? O TYR A 133 AA1 3 4 O LEU A 130 ? O LEU A 130 N VAL A 119 ? N VAL A 119 AA1 4 5 O CYS A 118 ? O CYS A 118 N ARG A 115 ? N ARG A 115 AA2 1 2 N THR A 56 ? N THR A 56 O ILE A 84 ? O ILE A 84 AA2 2 3 N ILE A 83 ? N ILE A 83 O TYR A 133 ? O TYR A 133 AA2 3 4 N ALA A 134 ? N ALA A 134 O CYS A 144 ? O CYS A 144 AA2 4 5 N ILE A 145 ? N ILE A 145 O GLN A 160 ? O GLN A 160 AA3 1 2 N ARG A 224 ? N ARG A 224 O THR A 233 ? O THR A 233 AA4 1 2 N ASP A 256 ? N ASP A 256 O ARG A 261 ? O ARG A 261 # _pdbx_entry_details.entry_id 8YSG _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification N # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 194 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O1G _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GTP _pdbx_validate_close_contact.auth_seq_id_2 401 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 44 ? ? -122.10 -57.05 2 1 PHE A 45 ? ? -87.11 41.71 3 1 PRO A 124 ? ? -59.06 104.96 4 1 ASP A 163 ? ? -150.02 60.79 5 1 LEU A 175 ? ? -129.41 -166.69 6 1 LEU A 207 ? ? -19.89 128.47 7 1 GLN A 260 ? ? 39.23 46.75 8 1 SER A 306 ? ? -157.32 -62.19 9 1 ARG A 307 ? ? -29.50 -64.39 10 1 ALA A 313 ? ? -41.71 -80.97 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 611 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.38 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A PRO 3 ? A PRO 3 4 1 Y 1 A SER 199 ? A SER 199 5 1 Y 1 A SER 200 ? A SER 200 6 1 Y 1 A ASP 201 ? A ASP 201 7 1 Y 1 A GLY 202 ? A GLY 202 8 1 Y 1 A ASN 203 ? A ASN 203 9 1 Y 1 A ALA 204 ? A ALA 204 10 1 Y 1 A ALA 205 ? A ALA 205 11 1 Y 1 A ASP 331 ? A ASP 331 12 1 Y 1 A LYS 332 ? A LYS 332 13 1 Y 1 A SER 333 ? A SER 333 14 1 Y 1 A ALA 334 ? A ALA 334 15 1 Y 1 A VAL 335 ? A VAL 335 16 1 Y 1 A HIS 336 ? A HIS 336 17 1 Y 1 A THR 337 ? A THR 337 18 1 Y 1 A ALA 338 ? A ALA 338 19 1 Y 1 A PRO 339 ? A PRO 339 20 1 Y 1 A ALA 340 ? A ALA 340 21 1 Y 1 A ILE 341 ? A ILE 341 22 1 Y 1 A VAL 342 ? A VAL 342 23 1 Y 1 A GLY 343 ? A GLY 343 24 1 Y 1 A SER 344 ? A SER 344 25 1 Y 1 A GLY 345 ? A GLY 345 26 1 Y 1 A SER 346 ? A SER 346 27 1 Y 1 A SER 347 ? A SER 347 28 1 Y 1 A GLY 348 ? A GLY 348 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GTP PG P N N 137 GTP O1G O N N 138 GTP O2G O N N 139 GTP O3G O N N 140 GTP O3B O N N 141 GTP PB P N N 142 GTP O1B O N N 143 GTP O2B O N N 144 GTP O3A O N N 145 GTP PA P N N 146 GTP O1A O N N 147 GTP O2A O N N 148 GTP "O5'" O N N 149 GTP "C5'" C N N 150 GTP "C4'" C N R 151 GTP "O4'" O N N 152 GTP "C3'" C N S 153 GTP "O3'" O N N 154 GTP "C2'" C N R 155 GTP "O2'" O N N 156 GTP "C1'" C N R 157 GTP N9 N Y N 158 GTP C8 C Y N 159 GTP N7 N Y N 160 GTP C5 C Y N 161 GTP C6 C N N 162 GTP O6 O N N 163 GTP N1 N N N 164 GTP C2 C N N 165 GTP N2 N N N 166 GTP N3 N N N 167 GTP C4 C Y N 168 GTP HOG2 H N N 169 GTP HOG3 H N N 170 GTP HOB2 H N N 171 GTP HOA2 H N N 172 GTP "H5'" H N N 173 GTP "H5''" H N N 174 GTP "H4'" H N N 175 GTP "H3'" H N N 176 GTP "HO3'" H N N 177 GTP "H2'" H N N 178 GTP "HO2'" H N N 179 GTP "H1'" H N N 180 GTP H8 H N N 181 GTP HN1 H N N 182 GTP HN21 H N N 183 GTP HN22 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MG MG MG N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GTP PG O1G doub N N 129 GTP PG O2G sing N N 130 GTP PG O3G sing N N 131 GTP PG O3B sing N N 132 GTP O2G HOG2 sing N N 133 GTP O3G HOG3 sing N N 134 GTP O3B PB sing N N 135 GTP PB O1B doub N N 136 GTP PB O2B sing N N 137 GTP PB O3A sing N N 138 GTP O2B HOB2 sing N N 139 GTP O3A PA sing N N 140 GTP PA O1A doub N N 141 GTP PA O2A sing N N 142 GTP PA "O5'" sing N N 143 GTP O2A HOA2 sing N N 144 GTP "O5'" "C5'" sing N N 145 GTP "C5'" "C4'" sing N N 146 GTP "C5'" "H5'" sing N N 147 GTP "C5'" "H5''" sing N N 148 GTP "C4'" "O4'" sing N N 149 GTP "C4'" "C3'" sing N N 150 GTP "C4'" "H4'" sing N N 151 GTP "O4'" "C1'" sing N N 152 GTP "C3'" "O3'" sing N N 153 GTP "C3'" "C2'" sing N N 154 GTP "C3'" "H3'" sing N N 155 GTP "O3'" "HO3'" sing N N 156 GTP "C2'" "O2'" sing N N 157 GTP "C2'" "C1'" sing N N 158 GTP "C2'" "H2'" sing N N 159 GTP "O2'" "HO2'" sing N N 160 GTP "C1'" N9 sing N N 161 GTP "C1'" "H1'" sing N N 162 GTP N9 C8 sing Y N 163 GTP N9 C4 sing Y N 164 GTP C8 N7 doub Y N 165 GTP C8 H8 sing N N 166 GTP N7 C5 sing Y N 167 GTP C5 C6 sing N N 168 GTP C5 C4 doub Y N 169 GTP C6 O6 doub N N 170 GTP C6 N1 sing N N 171 GTP N1 C2 sing N N 172 GTP N1 HN1 sing N N 173 GTP C2 N2 sing N N 174 GTP C2 N3 doub N N 175 GTP N2 HN21 sing N N 176 GTP N2 HN22 sing N N 177 GTP N3 C4 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # _pdbx_audit_support.funding_organization 'Ministry of Science and Technology (MoST, Taiwan)' _pdbx_audit_support.country Taiwan _pdbx_audit_support.grant_number 111-2311-B-039-001-MY3 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details 'apo DwCdnB' # _atom_sites.entry_id 8YSG _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.028545 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005870 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009960 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022004 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c C 6 6 2.310 20.844 1.020 10.208 1.589 0.569 0.865 51.651 0.216 H 1 1 0.493 10.511 0.323 26.126 0.140 3.142 0.041 57.800 0.003 MG 12 12 5.427 2.828 2.176 79.261 1.228 0.381 2.310 7.194 0.859 N 7 7 12.222 0.006 3.135 9.893 2.014 28.997 1.167 0.583 -11.538 O 8 8 3.049 13.277 2.287 5.701 1.546 0.324 0.867 32.909 0.251 P 15 15 6.435 1.907 4.179 27.157 1.780 0.526 1.491 68.164 1.115 S 16 16 6.905 1.468 5.203 22.215 1.438 0.254 1.586 56.172 0.867 # loop_