data_8YTP # _entry.id 8YTP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.398 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8YTP pdb_00008ytp 10.2210/pdb8ytp/pdb WWPDB D_1300046352 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-07-03 2 'Structure model' 1 1 2024-07-10 3 'Structure model' 1 2 2024-11-06 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' pdbx_entry_details 3 3 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 3 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8YTP _pdbx_database_status.recvd_initial_deposition_date 2024-03-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email hanazono.str@tmd.ac.jp _pdbx_contact_author.name_first Yuya _pdbx_contact_author.name_last Hanazono _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-3102-2945 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yoshida, M.' 1 ? 'Hanazono, Y.' 2 ? 'Numoto, N.' 3 ? 'Ito, N.' 4 ? 'Oda, M.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Arch.Biochem.Biophys. _citation.journal_id_ASTM ABBIA4 _citation.journal_id_CSD 0158 _citation.journal_id_ISSN 1096-0384 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 758 _citation.language ? _citation.page_first 110068 _citation.page_last 110068 _citation.title 'Affinity-matured antibody with a disulfide bond in H-CDR3 loop.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.abb.2024.110068 _citation.pdbx_database_id_PubMed 38909835 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yoshida, M.' 1 ? primary 'Hanazono, Y.' 2 ? primary 'Numoto, N.' 3 ? primary 'Nagao, S.' 4 ? primary 'Yabuno, S.' 5 ? primary 'Kitagawa, Y.' 6 ? primary 'Sekiguchi, H.' 7 ? primary 'Ito, N.' 8 ? primary 'Azuma, T.' 9 ? primary 'Oda, M.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Single-chain Fv antibody of E11' 26157.059 1 ? ? ? ? 2 non-polymer syn '2-[2-(3-nitro-4-oxidanyl-phenyl)ethanoylamino]ethanoic acid' 254.196 1 ? ? ? ? 3 water nat water 18.015 222 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSAQAVVTQESALTTSPGETVTLTCRSSTGAVISSNFVSWVQEKPDHLFTGLIGGNKNRAPGVPARFSGSLIGDKAVLTI TGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQGGGGSGGGGSGGGGSQVQLQQPGAELAKPGASVQLSCKGSGYTFPN YWMHWVTQRPGRGLEWIGRIDPNSGFIRYDERFKTKATLTVDKPSSTAYMQLSSLTSDDSAVYFCARGCYGCIHFDYWGQ GTTLTVSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSAQAVVTQESALTTSPGETVTLTCRSSTGAVISSNFVSWVQEKPDHLFTGLIGGNKNRAPGVPARFSGSLIGDKAVLTI TGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQGGGGSGGGGSGGGGSQVQLQQPGAELAKPGASVQLSCKGSGYTFPN YWMHWVTQRPGRGLEWIGRIDPNSGFIRYDERFKTKATLTVDKPSSTAYMQLSSLTSDDSAVYFCARGCYGCIHFDYWGQ GTTLTVSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '2-[2-(3-nitro-4-oxidanyl-phenyl)ethanoylamino]ethanoic acid' A1LZO 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 GLN n 1 5 ALA n 1 6 VAL n 1 7 VAL n 1 8 THR n 1 9 GLN n 1 10 GLU n 1 11 SER n 1 12 ALA n 1 13 LEU n 1 14 THR n 1 15 THR n 1 16 SER n 1 17 PRO n 1 18 GLY n 1 19 GLU n 1 20 THR n 1 21 VAL n 1 22 THR n 1 23 LEU n 1 24 THR n 1 25 CYS n 1 26 ARG n 1 27 SER n 1 28 SER n 1 29 THR n 1 30 GLY n 1 31 ALA n 1 32 VAL n 1 33 ILE n 1 34 SER n 1 35 SER n 1 36 ASN n 1 37 PHE n 1 38 VAL n 1 39 SER n 1 40 TRP n 1 41 VAL n 1 42 GLN n 1 43 GLU n 1 44 LYS n 1 45 PRO n 1 46 ASP n 1 47 HIS n 1 48 LEU n 1 49 PHE n 1 50 THR n 1 51 GLY n 1 52 LEU n 1 53 ILE n 1 54 GLY n 1 55 GLY n 1 56 ASN n 1 57 LYS n 1 58 ASN n 1 59 ARG n 1 60 ALA n 1 61 PRO n 1 62 GLY n 1 63 VAL n 1 64 PRO n 1 65 ALA n 1 66 ARG n 1 67 PHE n 1 68 SER n 1 69 GLY n 1 70 SER n 1 71 LEU n 1 72 ILE n 1 73 GLY n 1 74 ASP n 1 75 LYS n 1 76 ALA n 1 77 VAL n 1 78 LEU n 1 79 THR n 1 80 ILE n 1 81 THR n 1 82 GLY n 1 83 ALA n 1 84 GLN n 1 85 THR n 1 86 GLU n 1 87 ASP n 1 88 GLU n 1 89 ALA n 1 90 ILE n 1 91 TYR n 1 92 PHE n 1 93 CYS n 1 94 ALA n 1 95 LEU n 1 96 TRP n 1 97 TYR n 1 98 SER n 1 99 ASN n 1 100 HIS n 1 101 TRP n 1 102 VAL n 1 103 PHE n 1 104 GLY n 1 105 GLY n 1 106 GLY n 1 107 THR n 1 108 LYS n 1 109 LEU n 1 110 THR n 1 111 VAL n 1 112 LEU n 1 113 GLY n 1 114 GLN n 1 115 GLY n 1 116 GLY n 1 117 GLY n 1 118 GLY n 1 119 SER n 1 120 GLY n 1 121 GLY n 1 122 GLY n 1 123 GLY n 1 124 SER n 1 125 GLY n 1 126 GLY n 1 127 GLY n 1 128 GLY n 1 129 SER n 1 130 GLN n 1 131 VAL n 1 132 GLN n 1 133 LEU n 1 134 GLN n 1 135 GLN n 1 136 PRO n 1 137 GLY n 1 138 ALA n 1 139 GLU n 1 140 LEU n 1 141 ALA n 1 142 LYS n 1 143 PRO n 1 144 GLY n 1 145 ALA n 1 146 SER n 1 147 VAL n 1 148 GLN n 1 149 LEU n 1 150 SER n 1 151 CYS n 1 152 LYS n 1 153 GLY n 1 154 SER n 1 155 GLY n 1 156 TYR n 1 157 THR n 1 158 PHE n 1 159 PRO n 1 160 ASN n 1 161 TYR n 1 162 TRP n 1 163 MET n 1 164 HIS n 1 165 TRP n 1 166 VAL n 1 167 THR n 1 168 GLN n 1 169 ARG n 1 170 PRO n 1 171 GLY n 1 172 ARG n 1 173 GLY n 1 174 LEU n 1 175 GLU n 1 176 TRP n 1 177 ILE n 1 178 GLY n 1 179 ARG n 1 180 ILE n 1 181 ASP n 1 182 PRO n 1 183 ASN n 1 184 SER n 1 185 GLY n 1 186 PHE n 1 187 ILE n 1 188 ARG n 1 189 TYR n 1 190 ASP n 1 191 GLU n 1 192 ARG n 1 193 PHE n 1 194 LYS n 1 195 THR n 1 196 LYS n 1 197 ALA n 1 198 THR n 1 199 LEU n 1 200 THR n 1 201 VAL n 1 202 ASP n 1 203 LYS n 1 204 PRO n 1 205 SER n 1 206 SER n 1 207 THR n 1 208 ALA n 1 209 TYR n 1 210 MET n 1 211 GLN n 1 212 LEU n 1 213 SER n 1 214 SER n 1 215 LEU n 1 216 THR n 1 217 SER n 1 218 ASP n 1 219 ASP n 1 220 SER n 1 221 ALA n 1 222 VAL n 1 223 TYR n 1 224 PHE n 1 225 CYS n 1 226 ALA n 1 227 ARG n 1 228 GLY n 1 229 CYS n 1 230 TYR n 1 231 GLY n 1 232 CYS n 1 233 ILE n 1 234 HIS n 1 235 PHE n 1 236 ASP n 1 237 TYR n 1 238 TRP n 1 239 GLY n 1 240 GLN n 1 241 GLY n 1 242 THR n 1 243 THR n 1 244 LEU n 1 245 THR n 1 246 VAL n 1 247 SER n 1 248 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 248 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1LZO non-polymer . '2-[2-(3-nitro-4-oxidanyl-phenyl)ethanoylamino]ethanoic acid' ? 'C10 H10 N2 O6' 254.196 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 GLN 4 4 ? ? ? A . n A 1 5 ALA 5 5 5 ALA ALA A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLN 9 9 9 GLN GLN A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 PRO 17 17 17 PRO PRO A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 VAL 21 21 21 VAL VAL A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 THR 24 24 24 THR THR A . n A 1 25 CYS 25 25 25 CYS CYS A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 TRP 40 40 40 TRP TRP A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 HIS 47 47 47 HIS HIS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 ALA 60 60 60 ALA ALA A . n A 1 61 PRO 61 61 61 PRO PRO A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 PHE 67 67 67 PHE PHE A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 THR 79 79 79 THR THR A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 ALA 94 94 94 ALA ALA A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 TRP 96 96 96 TRP TRP A . n A 1 97 TYR 97 97 97 TYR TYR A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 HIS 100 100 100 HIS HIS A . n A 1 101 TRP 101 101 101 TRP TRP A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 LYS 108 108 108 LYS LYS A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 THR 110 110 110 THR THR A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 GLY 113 113 113 GLY GLY A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 GLY 115 115 115 GLY GLY A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 ? ? ? A . n A 1 122 GLY 122 122 ? ? ? A . n A 1 123 GLY 123 123 ? ? ? A . n A 1 124 SER 124 124 ? ? ? A . n A 1 125 GLY 125 125 ? ? ? A . n A 1 126 GLY 126 126 ? ? ? A . n A 1 127 GLY 127 127 ? ? ? A . n A 1 128 GLY 128 128 ? ? ? A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 GLN 130 130 130 GLN GLN A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 GLN 132 132 132 GLN GLN A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 GLN 134 134 134 GLN GLN A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 PRO 136 136 136 PRO PRO A . n A 1 137 GLY 137 137 137 GLY GLY A . n A 1 138 ALA 138 138 138 ALA ALA A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 LYS 142 142 142 LYS LYS A . n A 1 143 PRO 143 143 143 PRO PRO A . n A 1 144 GLY 144 144 144 GLY GLY A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 GLN 148 148 148 GLN GLN A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 SER 154 154 154 SER SER A . n A 1 155 GLY 155 155 155 GLY GLY A . n A 1 156 TYR 156 156 156 TYR TYR A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 PHE 158 158 158 PHE PHE A . n A 1 159 PRO 159 159 159 PRO PRO A . n A 1 160 ASN 160 160 160 ASN ASN A . n A 1 161 TYR 161 161 161 TYR TYR A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 MET 163 163 163 MET MET A . n A 1 164 HIS 164 164 164 HIS HIS A . n A 1 165 TRP 165 165 165 TRP TRP A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 GLN 168 168 168 GLN GLN A . n A 1 169 ARG 169 169 169 ARG ARG A . n A 1 170 PRO 170 170 170 PRO PRO A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 ARG 172 172 172 ARG ARG A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 GLU 175 175 175 GLU GLU A . n A 1 176 TRP 176 176 176 TRP TRP A . n A 1 177 ILE 177 177 177 ILE ILE A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 ARG 179 179 179 ARG ARG A . n A 1 180 ILE 180 180 180 ILE ILE A . n A 1 181 ASP 181 181 181 ASP ASP A . n A 1 182 PRO 182 182 182 PRO PRO A . n A 1 183 ASN 183 183 183 ASN ASN A . n A 1 184 SER 184 184 184 SER SER A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 PHE 186 186 186 PHE PHE A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 ARG 188 188 188 ARG ARG A . n A 1 189 TYR 189 189 189 TYR TYR A . n A 1 190 ASP 190 190 190 ASP ASP A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 ARG 192 192 192 ARG ARG A . n A 1 193 PHE 193 193 193 PHE PHE A . n A 1 194 LYS 194 194 194 LYS LYS A . n A 1 195 THR 195 195 195 THR THR A . n A 1 196 LYS 196 196 196 LYS LYS A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 ASP 202 202 202 ASP ASP A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 SER 205 205 205 SER SER A . n A 1 206 SER 206 206 206 SER SER A . n A 1 207 THR 207 207 207 THR THR A . n A 1 208 ALA 208 208 208 ALA ALA A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 MET 210 210 210 MET MET A . n A 1 211 GLN 211 211 211 GLN GLN A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 SER 213 213 213 SER SER A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 SER 217 217 217 SER SER A . n A 1 218 ASP 218 218 218 ASP ASP A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 SER 220 220 220 SER SER A . n A 1 221 ALA 221 221 221 ALA ALA A . n A 1 222 VAL 222 222 222 VAL VAL A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 PHE 224 224 224 PHE PHE A . n A 1 225 CYS 225 225 225 CYS CYS A . n A 1 226 ALA 226 226 226 ALA ALA A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 CYS 229 229 229 CYS CYS A . n A 1 230 TYR 230 230 230 TYR TYR A . n A 1 231 GLY 231 231 231 GLY GLY A . n A 1 232 CYS 232 232 232 CYS CYS A . n A 1 233 ILE 233 233 233 ILE ILE A . n A 1 234 HIS 234 234 234 HIS HIS A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 ASP 236 236 236 ASP ASP A . n A 1 237 TYR 237 237 237 TYR TYR A . n A 1 238 TRP 238 238 238 TRP TRP A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 GLN 240 240 240 GLN GLN A . n A 1 241 GLY 241 241 241 GLY GLY A . n A 1 242 THR 242 242 242 THR THR A . n A 1 243 THR 243 243 243 THR THR A . n A 1 244 LEU 244 244 244 LEU LEU A . n A 1 245 THR 245 245 245 THR THR A . n A 1 246 VAL 246 246 246 VAL VAL A . n A 1 247 SER 247 247 247 SER SER A . n A 1 248 SER 248 248 248 SER SER A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1LZO _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1LZO _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1LZO 1 401 401 A1LZO LIG A . C 3 HOH 1 501 74 HOH HOH A . C 3 HOH 2 502 16 HOH HOH A . C 3 HOH 3 503 72 HOH HOH A . C 3 HOH 4 504 198 HOH HOH A . C 3 HOH 5 505 33 HOH HOH A . C 3 HOH 6 506 54 HOH HOH A . C 3 HOH 7 507 102 HOH HOH A . C 3 HOH 8 508 61 HOH HOH A . C 3 HOH 9 509 125 HOH HOH A . C 3 HOH 10 510 156 HOH HOH A . C 3 HOH 11 511 116 HOH HOH A . C 3 HOH 12 512 161 HOH HOH A . C 3 HOH 13 513 90 HOH HOH A . C 3 HOH 14 514 210 HOH HOH A . C 3 HOH 15 515 200 HOH HOH A . C 3 HOH 16 516 179 HOH HOH A . C 3 HOH 17 517 92 HOH HOH A . C 3 HOH 18 518 190 HOH HOH A . C 3 HOH 19 519 71 HOH HOH A . C 3 HOH 20 520 8 HOH HOH A . C 3 HOH 21 521 40 HOH HOH A . C 3 HOH 22 522 124 HOH HOH A . C 3 HOH 23 523 121 HOH HOH A . C 3 HOH 24 524 182 HOH HOH A . C 3 HOH 25 525 193 HOH HOH A . C 3 HOH 26 526 171 HOH HOH A . C 3 HOH 27 527 134 HOH HOH A . C 3 HOH 28 528 56 HOH HOH A . C 3 HOH 29 529 31 HOH HOH A . C 3 HOH 30 530 95 HOH HOH A . C 3 HOH 31 531 108 HOH HOH A . C 3 HOH 32 532 89 HOH HOH A . C 3 HOH 33 533 42 HOH HOH A . C 3 HOH 34 534 150 HOH HOH A . C 3 HOH 35 535 127 HOH HOH A . C 3 HOH 36 536 37 HOH HOH A . C 3 HOH 37 537 149 HOH HOH A . C 3 HOH 38 538 94 HOH HOH A . C 3 HOH 39 539 97 HOH HOH A . C 3 HOH 40 540 48 HOH HOH A . C 3 HOH 41 541 23 HOH HOH A . C 3 HOH 42 542 55 HOH HOH A . C 3 HOH 43 543 117 HOH HOH A . C 3 HOH 44 544 187 HOH HOH A . C 3 HOH 45 545 221 HOH HOH A . C 3 HOH 46 546 46 HOH HOH A . C 3 HOH 47 547 18 HOH HOH A . C 3 HOH 48 548 3 HOH HOH A . C 3 HOH 49 549 50 HOH HOH A . C 3 HOH 50 550 169 HOH HOH A . C 3 HOH 51 551 36 HOH HOH A . C 3 HOH 52 552 19 HOH HOH A . C 3 HOH 53 553 47 HOH HOH A . C 3 HOH 54 554 154 HOH HOH A . C 3 HOH 55 555 70 HOH HOH A . C 3 HOH 56 556 81 HOH HOH A . C 3 HOH 57 557 27 HOH HOH A . C 3 HOH 58 558 5 HOH HOH A . C 3 HOH 59 559 30 HOH HOH A . C 3 HOH 60 560 211 HOH HOH A . C 3 HOH 61 561 172 HOH HOH A . C 3 HOH 62 562 82 HOH HOH A . C 3 HOH 63 563 9 HOH HOH A . C 3 HOH 64 564 213 HOH HOH A . C 3 HOH 65 565 2 HOH HOH A . C 3 HOH 66 566 26 HOH HOH A . C 3 HOH 67 567 178 HOH HOH A . C 3 HOH 68 568 75 HOH HOH A . C 3 HOH 69 569 79 HOH HOH A . C 3 HOH 70 570 166 HOH HOH A . C 3 HOH 71 571 80 HOH HOH A . C 3 HOH 72 572 34 HOH HOH A . C 3 HOH 73 573 7 HOH HOH A . C 3 HOH 74 574 222 HOH HOH A . C 3 HOH 75 575 45 HOH HOH A . C 3 HOH 76 576 28 HOH HOH A . C 3 HOH 77 577 25 HOH HOH A . C 3 HOH 78 578 11 HOH HOH A . C 3 HOH 79 579 43 HOH HOH A . C 3 HOH 80 580 21 HOH HOH A . C 3 HOH 81 581 6 HOH HOH A . C 3 HOH 82 582 88 HOH HOH A . C 3 HOH 83 583 126 HOH HOH A . C 3 HOH 84 584 32 HOH HOH A . C 3 HOH 85 585 183 HOH HOH A . C 3 HOH 86 586 64 HOH HOH A . C 3 HOH 87 587 220 HOH HOH A . C 3 HOH 88 588 112 HOH HOH A . C 3 HOH 89 589 131 HOH HOH A . C 3 HOH 90 590 1 HOH HOH A . C 3 HOH 91 591 113 HOH HOH A . C 3 HOH 92 592 164 HOH HOH A . C 3 HOH 93 593 68 HOH HOH A . C 3 HOH 94 594 135 HOH HOH A . C 3 HOH 95 595 20 HOH HOH A . C 3 HOH 96 596 38 HOH HOH A . C 3 HOH 97 597 195 HOH HOH A . C 3 HOH 98 598 10 HOH HOH A . C 3 HOH 99 599 189 HOH HOH A . C 3 HOH 100 600 13 HOH HOH A . C 3 HOH 101 601 181 HOH HOH A . C 3 HOH 102 602 84 HOH HOH A . C 3 HOH 103 603 218 HOH HOH A . C 3 HOH 104 604 173 HOH HOH A . C 3 HOH 105 605 51 HOH HOH A . C 3 HOH 106 606 62 HOH HOH A . C 3 HOH 107 607 49 HOH HOH A . C 3 HOH 108 608 103 HOH HOH A . C 3 HOH 109 609 15 HOH HOH A . C 3 HOH 110 610 107 HOH HOH A . C 3 HOH 111 611 132 HOH HOH A . C 3 HOH 112 612 141 HOH HOH A . C 3 HOH 113 613 17 HOH HOH A . C 3 HOH 114 614 99 HOH HOH A . C 3 HOH 115 615 73 HOH HOH A . C 3 HOH 116 616 65 HOH HOH A . C 3 HOH 117 617 4 HOH HOH A . C 3 HOH 118 618 63 HOH HOH A . C 3 HOH 119 619 162 HOH HOH A . C 3 HOH 120 620 167 HOH HOH A . C 3 HOH 121 621 96 HOH HOH A . C 3 HOH 122 622 87 HOH HOH A . C 3 HOH 123 623 52 HOH HOH A . C 3 HOH 124 624 85 HOH HOH A . C 3 HOH 125 625 151 HOH HOH A . C 3 HOH 126 626 69 HOH HOH A . C 3 HOH 127 627 119 HOH HOH A . C 3 HOH 128 628 59 HOH HOH A . C 3 HOH 129 629 192 HOH HOH A . C 3 HOH 130 630 14 HOH HOH A . C 3 HOH 131 631 144 HOH HOH A . C 3 HOH 132 632 163 HOH HOH A . C 3 HOH 133 633 86 HOH HOH A . C 3 HOH 134 634 67 HOH HOH A . C 3 HOH 135 635 41 HOH HOH A . C 3 HOH 136 636 180 HOH HOH A . C 3 HOH 137 637 128 HOH HOH A . C 3 HOH 138 638 136 HOH HOH A . C 3 HOH 139 639 201 HOH HOH A . C 3 HOH 140 640 186 HOH HOH A . C 3 HOH 141 641 184 HOH HOH A . C 3 HOH 142 642 115 HOH HOH A . C 3 HOH 143 643 53 HOH HOH A . C 3 HOH 144 644 120 HOH HOH A . C 3 HOH 145 645 138 HOH HOH A . C 3 HOH 146 646 109 HOH HOH A . C 3 HOH 147 647 185 HOH HOH A . C 3 HOH 148 648 66 HOH HOH A . C 3 HOH 149 649 143 HOH HOH A . C 3 HOH 150 650 214 HOH HOH A . C 3 HOH 151 651 206 HOH HOH A . C 3 HOH 152 652 57 HOH HOH A . C 3 HOH 153 653 29 HOH HOH A . C 3 HOH 154 654 168 HOH HOH A . C 3 HOH 155 655 93 HOH HOH A . C 3 HOH 156 656 160 HOH HOH A . C 3 HOH 157 657 60 HOH HOH A . C 3 HOH 158 658 12 HOH HOH A . C 3 HOH 159 659 175 HOH HOH A . C 3 HOH 160 660 123 HOH HOH A . C 3 HOH 161 661 158 HOH HOH A . C 3 HOH 162 662 24 HOH HOH A . C 3 HOH 163 663 39 HOH HOH A . C 3 HOH 164 664 196 HOH HOH A . C 3 HOH 165 665 58 HOH HOH A . C 3 HOH 166 666 202 HOH HOH A . C 3 HOH 167 667 22 HOH HOH A . C 3 HOH 168 668 170 HOH HOH A . C 3 HOH 169 669 35 HOH HOH A . C 3 HOH 170 670 139 HOH HOH A . C 3 HOH 171 671 191 HOH HOH A . C 3 HOH 172 672 77 HOH HOH A . C 3 HOH 173 673 152 HOH HOH A . C 3 HOH 174 674 188 HOH HOH A . C 3 HOH 175 675 44 HOH HOH A . C 3 HOH 176 676 122 HOH HOH A . C 3 HOH 177 677 91 HOH HOH A . C 3 HOH 178 678 106 HOH HOH A . C 3 HOH 179 679 101 HOH HOH A . C 3 HOH 180 680 148 HOH HOH A . C 3 HOH 181 681 111 HOH HOH A . C 3 HOH 182 682 76 HOH HOH A . C 3 HOH 183 683 137 HOH HOH A . C 3 HOH 184 684 133 HOH HOH A . C 3 HOH 185 685 98 HOH HOH A . C 3 HOH 186 686 157 HOH HOH A . C 3 HOH 187 687 219 HOH HOH A . C 3 HOH 188 688 203 HOH HOH A . C 3 HOH 189 689 176 HOH HOH A . C 3 HOH 190 690 159 HOH HOH A . C 3 HOH 191 691 208 HOH HOH A . C 3 HOH 192 692 153 HOH HOH A . C 3 HOH 193 693 194 HOH HOH A . C 3 HOH 194 694 140 HOH HOH A . C 3 HOH 195 695 129 HOH HOH A . C 3 HOH 196 696 209 HOH HOH A . C 3 HOH 197 697 197 HOH HOH A . C 3 HOH 198 698 118 HOH HOH A . C 3 HOH 199 699 100 HOH HOH A . C 3 HOH 200 700 83 HOH HOH A . C 3 HOH 201 701 146 HOH HOH A . C 3 HOH 202 702 174 HOH HOH A . C 3 HOH 203 703 147 HOH HOH A . C 3 HOH 204 704 105 HOH HOH A . C 3 HOH 205 705 114 HOH HOH A . C 3 HOH 206 706 204 HOH HOH A . C 3 HOH 207 707 130 HOH HOH A . C 3 HOH 208 708 142 HOH HOH A . C 3 HOH 209 709 207 HOH HOH A . C 3 HOH 210 710 217 HOH HOH A . C 3 HOH 211 711 199 HOH HOH A . C 3 HOH 212 712 212 HOH HOH A . C 3 HOH 213 713 110 HOH HOH A . C 3 HOH 214 714 205 HOH HOH A . C 3 HOH 215 715 155 HOH HOH A . C 3 HOH 216 716 215 HOH HOH A . C 3 HOH 217 717 104 HOH HOH A . C 3 HOH 218 718 78 HOH HOH A . C 3 HOH 219 719 177 HOH HOH A . C 3 HOH 220 720 165 HOH HOH A . C 3 HOH 221 721 145 HOH HOH A . C 3 HOH 222 722 216 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8YTP _cell.details ? _cell.formula_units_Z ? _cell.length_a 35.680 _cell.length_a_esd ? _cell.length_b 61.420 _cell.length_b_esd ? _cell.length_c 88.820 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8YTP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8YTP _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.86 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 33.88 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1 M HEPES sodium pH 7.5, 10% v/v 2-propanol, 20% w/v polyethylene glycol 4000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-10-25 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SPRING-8 BEAMLINE BL32XU' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.8 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL32XU _diffrn_source.pdbx_synchrotron_site SPring-8 # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8YTP _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.36 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 42209 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.2 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.101 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.36 _reflns_shell.d_res_low 1.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 6460 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.550 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.004 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8YTP _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.36 _refine.ls_d_res_low 35.99 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 42161 _refine.ls_number_reflns_R_free 2109 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.53 _refine.ls_percent_reflns_R_free 5.00 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1473 _refine.ls_R_factor_R_free 0.1748 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1458 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6K4Z _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.64 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.15 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1784 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 222 _refine_hist.number_atoms_total 2024 _refine_hist.d_res_high 1.36 _refine_hist.d_res_low 35.99 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 1944 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.256 ? 2668 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 15.299 ? 700 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.113 ? 292 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 ? 345 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.36 1.39 . . 136 2571 96.00 . . . . 0.2380 . . . . . . . . . . . 0.2917 'X-RAY DIFFRACTION' 1.39 1.43 . . 137 2615 98.00 . . . . 0.2219 . . . . . . . . . . . 0.2588 'X-RAY DIFFRACTION' 1.43 1.46 . . 139 2632 100.00 . . . . 0.1982 . . . . . . . . . . . 0.2535 'X-RAY DIFFRACTION' 1.47 1.51 . . 137 2624 98.00 . . . . 0.1805 . . . . . . . . . . . 0.2423 'X-RAY DIFFRACTION' 1.51 1.56 . . 140 2642 98.00 . . . . 0.1642 . . . . . . . . . . . 0.2164 'X-RAY DIFFRACTION' 1.56 1.61 . . 140 2670 100.00 . . . . 0.1591 . . . . . . . . . . . 0.2187 'X-RAY DIFFRACTION' 1.61 1.68 . . 140 2663 99.00 . . . . 0.1525 . . . . . . . . . . . 0.1902 'X-RAY DIFFRACTION' 1.68 1.75 . . 139 2638 99.00 . . . . 0.1380 . . . . . . . . . . . 0.2080 'X-RAY DIFFRACTION' 1.75 1.85 . . 141 2672 99.00 . . . . 0.1303 . . . . . . . . . . . 0.1927 'X-RAY DIFFRACTION' 1.85 1.96 . . 142 2696 99.00 . . . . 0.1360 . . . . . . . . . . . 0.1742 'X-RAY DIFFRACTION' 1.96 2.11 . . 141 2689 99.00 . . . . 0.1306 . . . . . . . . . . . 0.1764 'X-RAY DIFFRACTION' 2.11 2.33 . . 143 2709 100.00 . . . . 0.1324 . . . . . . . . . . . 0.1665 'X-RAY DIFFRACTION' 2.33 2.66 . . 141 2685 98.00 . . . . 0.1490 . . . . . . . . . . . 0.1545 'X-RAY DIFFRACTION' 2.66 3.35 . . 145 2742 99.00 . . . . 0.1499 . . . . . . . . . . . 0.1720 'X-RAY DIFFRACTION' 3.35 35.99 . . 148 2804 96.00 . . . . 0.1379 . . . . . . . . . . . 0.1479 # _struct.entry_id 8YTP _struct.title 'Single-chain Fv antibody of E11 complex with NP-glycine under reducing conditions' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8YTP _struct_keywords.text 'ANTIGEN BINDING, AFFINITY MATURATION, SOMATIC HYPERMUTATION, IMMUNE SYSTEM' _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8YTP _struct_ref.pdbx_db_accession 8YTP _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8YTP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 248 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 8YTP _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 248 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 248 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ILE A 33 ? PHE A 37 ? ILE A 33 PHE A 37 5 ? 5 HELX_P HELX_P2 AA2 GLN A 84 ? GLU A 88 ? GLN A 84 GLU A 88 5 ? 5 HELX_P HELX_P3 AA3 THR A 157 ? TYR A 161 ? THR A 157 TYR A 161 5 ? 5 HELX_P HELX_P4 AA4 GLU A 191 ? LYS A 194 ? GLU A 191 LYS A 194 5 ? 4 HELX_P HELX_P5 AA5 THR A 216 ? SER A 220 ? THR A 216 SER A 220 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 93 SG A ? A CYS 25 A CYS 93 1_555 ? ? ? ? ? ? ? 2.046 ? ? disulf2 disulf ? ? A CYS 25 SG ? ? ? 1_555 A CYS 93 SG B ? A CYS 25 A CYS 93 1_555 ? ? ? ? ? ? ? 1.939 ? ? disulf3 disulf ? ? A CYS 151 SG ? ? ? 1_555 A CYS 225 SG ? ? A CYS 151 A CYS 225 1_555 ? ? ? ? ? ? ? 2.042 ? ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 25 ? CYS A 93 A CYS A 25 ? 1_555 CYS A 93 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 25 ? CYS A 93 B CYS A 25 ? 1_555 CYS A 93 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 151 ? CYS A 225 ? CYS A 151 ? 1_555 CYS A 225 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 6 ? AA3 ? 4 ? AA4 ? 4 ? AA5 ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 7 ? GLN A 9 ? VAL A 7 GLN A 9 AA1 2 THR A 20 ? SER A 27 ? THR A 20 SER A 27 AA1 3 LYS A 75 ? THR A 81 ? LYS A 75 THR A 81 AA1 4 PHE A 67 ? ILE A 72 ? PHE A 67 ILE A 72 AA2 1 ALA A 12 ? THR A 15 ? ALA A 12 THR A 15 AA2 2 THR A 107 ? VAL A 111 ? THR A 107 VAL A 111 AA2 3 ALA A 89 ? TRP A 96 ? ALA A 89 TRP A 96 AA2 4 SER A 39 ? LYS A 44 ? SER A 39 LYS A 44 AA2 5 LEU A 48 ? GLY A 54 ? LEU A 48 GLY A 54 AA2 6 ASN A 58 ? ARG A 59 ? ASN A 58 ARG A 59 AA3 1 ALA A 12 ? THR A 15 ? ALA A 12 THR A 15 AA3 2 THR A 107 ? VAL A 111 ? THR A 107 VAL A 111 AA3 3 ALA A 89 ? TRP A 96 ? ALA A 89 TRP A 96 AA3 4 TRP A 101 ? PHE A 103 ? TRP A 101 PHE A 103 AA4 1 GLN A 132 ? GLN A 134 ? GLN A 132 GLN A 134 AA4 2 VAL A 147 ? SER A 154 ? VAL A 147 SER A 154 AA4 3 THR A 207 ? LEU A 212 ? THR A 207 LEU A 212 AA4 4 ALA A 197 ? ASP A 202 ? ALA A 197 ASP A 202 AA5 1 ALA A 138 ? ALA A 141 ? ALA A 138 ALA A 141 AA5 2 THR A 242 ? VAL A 246 ? THR A 242 VAL A 246 AA5 3 ALA A 221 ? GLY A 228 ? ALA A 221 GLY A 228 AA5 4 TRP A 162 ? ARG A 169 ? TRP A 162 ARG A 169 AA5 5 GLY A 173 ? ILE A 180 ? GLY A 173 ILE A 180 AA5 6 ILE A 187 ? TYR A 189 ? ILE A 187 TYR A 189 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N THR A 8 ? N THR A 8 O ARG A 26 ? O ARG A 26 AA1 2 3 N VAL A 21 ? N VAL A 21 O ILE A 80 ? O ILE A 80 AA1 3 4 O THR A 79 ? O THR A 79 N SER A 68 ? N SER A 68 AA2 1 2 N THR A 15 ? N THR A 15 O THR A 110 ? O THR A 110 AA2 2 3 O LEU A 109 ? O LEU A 109 N ALA A 89 ? N ALA A 89 AA2 3 4 O ILE A 90 ? O ILE A 90 N GLU A 43 ? N GLU A 43 AA2 4 5 N TRP A 40 ? N TRP A 40 O LEU A 52 ? O LEU A 52 AA2 5 6 N GLY A 54 ? N GLY A 54 O ASN A 58 ? O ASN A 58 AA3 1 2 N THR A 15 ? N THR A 15 O THR A 110 ? O THR A 110 AA3 2 3 O LEU A 109 ? O LEU A 109 N ALA A 89 ? N ALA A 89 AA3 3 4 N LEU A 95 ? N LEU A 95 O VAL A 102 ? O VAL A 102 AA4 1 2 N GLN A 134 ? N GLN A 134 O LYS A 152 ? O LYS A 152 AA4 2 3 N LEU A 149 ? N LEU A 149 O MET A 210 ? O MET A 210 AA4 3 4 O THR A 207 ? O THR A 207 N ASP A 202 ? N ASP A 202 AA5 1 2 N GLU A 139 ? N GLU A 139 O THR A 245 ? O THR A 245 AA5 2 3 O LEU A 244 ? O LEU A 244 N ALA A 221 ? N ALA A 221 AA5 3 4 O ALA A 226 ? O ALA A 226 N HIS A 164 ? N HIS A 164 AA5 4 5 N TRP A 165 ? N TRP A 165 O ILE A 177 ? O ILE A 177 AA5 5 6 N ARG A 179 ? N ARG A 179 O ARG A 188 ? O ARG A 188 # _pdbx_entry_details.entry_id 8YTP _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 46 ? ? 70.06 42.81 2 1 HIS A 47 ? ? 27.45 59.46 3 1 HIS A 47 ? ? 27.64 59.14 4 1 ASN A 56 ? ? 76.41 -46.63 5 1 TYR A 97 ? ? -116.95 64.33 6 1 SER A 98 ? ? 76.34 -41.51 7 1 ASN A 99 ? ? -146.45 10.01 8 1 CYS A 229 ? ? -171.12 133.70 9 1 CYS A 232 ? ? -119.82 -150.94 10 1 PHE A 235 ? ? 70.36 30.82 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A ALA 3 ? A ALA 3 4 1 Y 1 A GLN 4 ? A GLN 4 5 1 Y 1 A GLY 121 ? A GLY 121 6 1 Y 1 A GLY 122 ? A GLY 122 7 1 Y 1 A GLY 123 ? A GLY 123 8 1 Y 1 A SER 124 ? A SER 124 9 1 Y 1 A GLY 125 ? A GLY 125 10 1 Y 1 A GLY 126 ? A GLY 126 11 1 Y 1 A GLY 127 ? A GLY 127 12 1 Y 1 A GLY 128 ? A GLY 128 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1LZO C10 C N N 1 A1LZO N12 N N N 2 A1LZO C01 C Y N 3 A1LZO C02 C Y N 4 A1LZO C03 C Y N 5 A1LZO C04 C Y N 6 A1LZO C05 C Y N 7 A1LZO C06 C Y N 8 A1LZO C08 C N N 9 A1LZO C09 C N N 10 A1LZO C18 C N N 11 A1LZO N11 N N N 12 A1LZO O07 O N N 13 A1LZO O13 O N N 14 A1LZO O14 O N N 15 A1LZO O15 O N N 16 A1LZO O16 O N N 17 A1LZO O17 O N N 18 A1LZO H121 H N N 19 A1LZO H011 H N N 20 A1LZO H041 H N N 21 A1LZO H061 H N N 22 A1LZO H091 H N N 23 A1LZO H092 H N N 24 A1LZO H182 H N N 25 A1LZO H181 H N N 26 A1LZO H071 H N N 27 A1LZO H1 H N N 28 ALA N N N N 29 ALA CA C N S 30 ALA C C N N 31 ALA O O N N 32 ALA CB C N N 33 ALA OXT O N N 34 ALA H H N N 35 ALA H2 H N N 36 ALA HA H N N 37 ALA HB1 H N N 38 ALA HB2 H N N 39 ALA HB3 H N N 40 ALA HXT H N N 41 ARG N N N N 42 ARG CA C N S 43 ARG C C N N 44 ARG O O N N 45 ARG CB C N N 46 ARG CG C N N 47 ARG CD C N N 48 ARG NE N N N 49 ARG CZ C N N 50 ARG NH1 N N N 51 ARG NH2 N N N 52 ARG OXT O N N 53 ARG H H N N 54 ARG H2 H N N 55 ARG HA H N N 56 ARG HB2 H N N 57 ARG HB3 H N N 58 ARG HG2 H N N 59 ARG HG3 H N N 60 ARG HD2 H N N 61 ARG HD3 H N N 62 ARG HE H N N 63 ARG HH11 H N N 64 ARG HH12 H N N 65 ARG HH21 H N N 66 ARG HH22 H N N 67 ARG HXT H N N 68 ASN N N N N 69 ASN CA C N S 70 ASN C C N N 71 ASN O O N N 72 ASN CB C N N 73 ASN CG C N N 74 ASN OD1 O N N 75 ASN ND2 N N N 76 ASN OXT O N N 77 ASN H H N N 78 ASN H2 H N N 79 ASN HA H N N 80 ASN HB2 H N N 81 ASN HB3 H N N 82 ASN HD21 H N N 83 ASN HD22 H N N 84 ASN HXT H N N 85 ASP N N N N 86 ASP CA C N S 87 ASP C C N N 88 ASP O O N N 89 ASP CB C N N 90 ASP CG C N N 91 ASP OD1 O N N 92 ASP OD2 O N N 93 ASP OXT O N N 94 ASP H H N N 95 ASP H2 H N N 96 ASP HA H N N 97 ASP HB2 H N N 98 ASP HB3 H N N 99 ASP HD2 H N N 100 ASP HXT H N N 101 CYS N N N N 102 CYS CA C N R 103 CYS C C N N 104 CYS O O N N 105 CYS CB C N N 106 CYS SG S N N 107 CYS OXT O N N 108 CYS H H N N 109 CYS H2 H N N 110 CYS HA H N N 111 CYS HB2 H N N 112 CYS HB3 H N N 113 CYS HG H N N 114 CYS HXT H N N 115 GLN N N N N 116 GLN CA C N S 117 GLN C C N N 118 GLN O O N N 119 GLN CB C N N 120 GLN CG C N N 121 GLN CD C N N 122 GLN OE1 O N N 123 GLN NE2 N N N 124 GLN OXT O N N 125 GLN H H N N 126 GLN H2 H N N 127 GLN HA H N N 128 GLN HB2 H N N 129 GLN HB3 H N N 130 GLN HG2 H N N 131 GLN HG3 H N N 132 GLN HE21 H N N 133 GLN HE22 H N N 134 GLN HXT H N N 135 GLU N N N N 136 GLU CA C N S 137 GLU C C N N 138 GLU O O N N 139 GLU CB C N N 140 GLU CG C N N 141 GLU CD C N N 142 GLU OE1 O N N 143 GLU OE2 O N N 144 GLU OXT O N N 145 GLU H H N N 146 GLU H2 H N N 147 GLU HA H N N 148 GLU HB2 H N N 149 GLU HB3 H N N 150 GLU HG2 H N N 151 GLU HG3 H N N 152 GLU HE2 H N N 153 GLU HXT H N N 154 GLY N N N N 155 GLY CA C N N 156 GLY C C N N 157 GLY O O N N 158 GLY OXT O N N 159 GLY H H N N 160 GLY H2 H N N 161 GLY HA2 H N N 162 GLY HA3 H N N 163 GLY HXT H N N 164 HIS N N N N 165 HIS CA C N S 166 HIS C C N N 167 HIS O O N N 168 HIS CB C N N 169 HIS CG C Y N 170 HIS ND1 N Y N 171 HIS CD2 C Y N 172 HIS CE1 C Y N 173 HIS NE2 N Y N 174 HIS OXT O N N 175 HIS H H N N 176 HIS H2 H N N 177 HIS HA H N N 178 HIS HB2 H N N 179 HIS HB3 H N N 180 HIS HD1 H N N 181 HIS HD2 H N N 182 HIS HE1 H N N 183 HIS HE2 H N N 184 HIS HXT H N N 185 HOH O O N N 186 HOH H1 H N N 187 HOH H2 H N N 188 ILE N N N N 189 ILE CA C N S 190 ILE C C N N 191 ILE O O N N 192 ILE CB C N S 193 ILE CG1 C N N 194 ILE CG2 C N N 195 ILE CD1 C N N 196 ILE OXT O N N 197 ILE H H N N 198 ILE H2 H N N 199 ILE HA H N N 200 ILE HB H N N 201 ILE HG12 H N N 202 ILE HG13 H N N 203 ILE HG21 H N N 204 ILE HG22 H N N 205 ILE HG23 H N N 206 ILE HD11 H N N 207 ILE HD12 H N N 208 ILE HD13 H N N 209 ILE HXT H N N 210 LEU N N N N 211 LEU CA C N S 212 LEU C C N N 213 LEU O O N N 214 LEU CB C N N 215 LEU CG C N N 216 LEU CD1 C N N 217 LEU CD2 C N N 218 LEU OXT O N N 219 LEU H H N N 220 LEU H2 H N N 221 LEU HA H N N 222 LEU HB2 H N N 223 LEU HB3 H N N 224 LEU HG H N N 225 LEU HD11 H N N 226 LEU HD12 H N N 227 LEU HD13 H N N 228 LEU HD21 H N N 229 LEU HD22 H N N 230 LEU HD23 H N N 231 LEU HXT H N N 232 LYS N N N N 233 LYS CA C N S 234 LYS C C N N 235 LYS O O N N 236 LYS CB C N N 237 LYS CG C N N 238 LYS CD C N N 239 LYS CE C N N 240 LYS NZ N N N 241 LYS OXT O N N 242 LYS H H N N 243 LYS H2 H N N 244 LYS HA H N N 245 LYS HB2 H N N 246 LYS HB3 H N N 247 LYS HG2 H N N 248 LYS HG3 H N N 249 LYS HD2 H N N 250 LYS HD3 H N N 251 LYS HE2 H N N 252 LYS HE3 H N N 253 LYS HZ1 H N N 254 LYS HZ2 H N N 255 LYS HZ3 H N N 256 LYS HXT H N N 257 MET N N N N 258 MET CA C N S 259 MET C C N N 260 MET O O N N 261 MET CB C N N 262 MET CG C N N 263 MET SD S N N 264 MET CE C N N 265 MET OXT O N N 266 MET H H N N 267 MET H2 H N N 268 MET HA H N N 269 MET HB2 H N N 270 MET HB3 H N N 271 MET HG2 H N N 272 MET HG3 H N N 273 MET HE1 H N N 274 MET HE2 H N N 275 MET HE3 H N N 276 MET HXT H N N 277 PHE N N N N 278 PHE CA C N S 279 PHE C C N N 280 PHE O O N N 281 PHE CB C N N 282 PHE CG C Y N 283 PHE CD1 C Y N 284 PHE CD2 C Y N 285 PHE CE1 C Y N 286 PHE CE2 C Y N 287 PHE CZ C Y N 288 PHE OXT O N N 289 PHE H H N N 290 PHE H2 H N N 291 PHE HA H N N 292 PHE HB2 H N N 293 PHE HB3 H N N 294 PHE HD1 H N N 295 PHE HD2 H N N 296 PHE HE1 H N N 297 PHE HE2 H N N 298 PHE HZ H N N 299 PHE HXT H N N 300 PRO N N N N 301 PRO CA C N S 302 PRO C C N N 303 PRO O O N N 304 PRO CB C N N 305 PRO CG C N N 306 PRO CD C N N 307 PRO OXT O N N 308 PRO H H N N 309 PRO HA H N N 310 PRO HB2 H N N 311 PRO HB3 H N N 312 PRO HG2 H N N 313 PRO HG3 H N N 314 PRO HD2 H N N 315 PRO HD3 H N N 316 PRO HXT H N N 317 SER N N N N 318 SER CA C N S 319 SER C C N N 320 SER O O N N 321 SER CB C N N 322 SER OG O N N 323 SER OXT O N N 324 SER H H N N 325 SER H2 H N N 326 SER HA H N N 327 SER HB2 H N N 328 SER HB3 H N N 329 SER HG H N N 330 SER HXT H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TRP N N N N 349 TRP CA C N S 350 TRP C C N N 351 TRP O O N N 352 TRP CB C N N 353 TRP CG C Y N 354 TRP CD1 C Y N 355 TRP CD2 C Y N 356 TRP NE1 N Y N 357 TRP CE2 C Y N 358 TRP CE3 C Y N 359 TRP CZ2 C Y N 360 TRP CZ3 C Y N 361 TRP CH2 C Y N 362 TRP OXT O N N 363 TRP H H N N 364 TRP H2 H N N 365 TRP HA H N N 366 TRP HB2 H N N 367 TRP HB3 H N N 368 TRP HD1 H N N 369 TRP HE1 H N N 370 TRP HE3 H N N 371 TRP HZ2 H N N 372 TRP HZ3 H N N 373 TRP HH2 H N N 374 TRP HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1LZO O07 C02 sing N N 1 A1LZO O16 N11 doub N N 2 A1LZO C02 C01 doub Y N 3 A1LZO C02 C03 sing Y N 4 A1LZO C01 C06 sing Y N 5 A1LZO N11 C03 sing N N 6 A1LZO N11 O15 doub N N 7 A1LZO C03 C04 doub Y N 8 A1LZO C06 C05 doub Y N 9 A1LZO C04 C05 sing Y N 10 A1LZO C05 C09 sing N N 11 A1LZO C09 C10 sing N N 12 A1LZO C10 O17 doub N N 13 A1LZO C10 N12 sing N N 14 A1LZO N12 C18 sing N N 15 A1LZO C18 C08 sing N N 16 A1LZO O13 C08 doub N N 17 A1LZO C08 O14 sing N N 18 A1LZO N12 H121 sing N N 19 A1LZO C01 H011 sing N N 20 A1LZO C04 H041 sing N N 21 A1LZO C06 H061 sing N N 22 A1LZO C09 H091 sing N N 23 A1LZO C09 H092 sing N N 24 A1LZO C18 H182 sing N N 25 A1LZO C18 H181 sing N N 26 A1LZO O07 H071 sing N N 27 A1LZO O14 H1 sing N N 28 ALA N CA sing N N 29 ALA N H sing N N 30 ALA N H2 sing N N 31 ALA CA C sing N N 32 ALA CA CB sing N N 33 ALA CA HA sing N N 34 ALA C O doub N N 35 ALA C OXT sing N N 36 ALA CB HB1 sing N N 37 ALA CB HB2 sing N N 38 ALA CB HB3 sing N N 39 ALA OXT HXT sing N N 40 ARG N CA sing N N 41 ARG N H sing N N 42 ARG N H2 sing N N 43 ARG CA C sing N N 44 ARG CA CB sing N N 45 ARG CA HA sing N N 46 ARG C O doub N N 47 ARG C OXT sing N N 48 ARG CB CG sing N N 49 ARG CB HB2 sing N N 50 ARG CB HB3 sing N N 51 ARG CG CD sing N N 52 ARG CG HG2 sing N N 53 ARG CG HG3 sing N N 54 ARG CD NE sing N N 55 ARG CD HD2 sing N N 56 ARG CD HD3 sing N N 57 ARG NE CZ sing N N 58 ARG NE HE sing N N 59 ARG CZ NH1 sing N N 60 ARG CZ NH2 doub N N 61 ARG NH1 HH11 sing N N 62 ARG NH1 HH12 sing N N 63 ARG NH2 HH21 sing N N 64 ARG NH2 HH22 sing N N 65 ARG OXT HXT sing N N 66 ASN N CA sing N N 67 ASN N H sing N N 68 ASN N H2 sing N N 69 ASN CA C sing N N 70 ASN CA CB sing N N 71 ASN CA HA sing N N 72 ASN C O doub N N 73 ASN C OXT sing N N 74 ASN CB CG sing N N 75 ASN CB HB2 sing N N 76 ASN CB HB3 sing N N 77 ASN CG OD1 doub N N 78 ASN CG ND2 sing N N 79 ASN ND2 HD21 sing N N 80 ASN ND2 HD22 sing N N 81 ASN OXT HXT sing N N 82 ASP N CA sing N N 83 ASP N H sing N N 84 ASP N H2 sing N N 85 ASP CA C sing N N 86 ASP CA CB sing N N 87 ASP CA HA sing N N 88 ASP C O doub N N 89 ASP C OXT sing N N 90 ASP CB CG sing N N 91 ASP CB HB2 sing N N 92 ASP CB HB3 sing N N 93 ASP CG OD1 doub N N 94 ASP CG OD2 sing N N 95 ASP OD2 HD2 sing N N 96 ASP OXT HXT sing N N 97 CYS N CA sing N N 98 CYS N H sing N N 99 CYS N H2 sing N N 100 CYS CA C sing N N 101 CYS CA CB sing N N 102 CYS CA HA sing N N 103 CYS C O doub N N 104 CYS C OXT sing N N 105 CYS CB SG sing N N 106 CYS CB HB2 sing N N 107 CYS CB HB3 sing N N 108 CYS SG HG sing N N 109 CYS OXT HXT sing N N 110 GLN N CA sing N N 111 GLN N H sing N N 112 GLN N H2 sing N N 113 GLN CA C sing N N 114 GLN CA CB sing N N 115 GLN CA HA sing N N 116 GLN C O doub N N 117 GLN C OXT sing N N 118 GLN CB CG sing N N 119 GLN CB HB2 sing N N 120 GLN CB HB3 sing N N 121 GLN CG CD sing N N 122 GLN CG HG2 sing N N 123 GLN CG HG3 sing N N 124 GLN CD OE1 doub N N 125 GLN CD NE2 sing N N 126 GLN NE2 HE21 sing N N 127 GLN NE2 HE22 sing N N 128 GLN OXT HXT sing N N 129 GLU N CA sing N N 130 GLU N H sing N N 131 GLU N H2 sing N N 132 GLU CA C sing N N 133 GLU CA CB sing N N 134 GLU CA HA sing N N 135 GLU C O doub N N 136 GLU C OXT sing N N 137 GLU CB CG sing N N 138 GLU CB HB2 sing N N 139 GLU CB HB3 sing N N 140 GLU CG CD sing N N 141 GLU CG HG2 sing N N 142 GLU CG HG3 sing N N 143 GLU CD OE1 doub N N 144 GLU CD OE2 sing N N 145 GLU OE2 HE2 sing N N 146 GLU OXT HXT sing N N 147 GLY N CA sing N N 148 GLY N H sing N N 149 GLY N H2 sing N N 150 GLY CA C sing N N 151 GLY CA HA2 sing N N 152 GLY CA HA3 sing N N 153 GLY C O doub N N 154 GLY C OXT sing N N 155 GLY OXT HXT sing N N 156 HIS N CA sing N N 157 HIS N H sing N N 158 HIS N H2 sing N N 159 HIS CA C sing N N 160 HIS CA CB sing N N 161 HIS CA HA sing N N 162 HIS C O doub N N 163 HIS C OXT sing N N 164 HIS CB CG sing N N 165 HIS CB HB2 sing N N 166 HIS CB HB3 sing N N 167 HIS CG ND1 sing Y N 168 HIS CG CD2 doub Y N 169 HIS ND1 CE1 doub Y N 170 HIS ND1 HD1 sing N N 171 HIS CD2 NE2 sing Y N 172 HIS CD2 HD2 sing N N 173 HIS CE1 NE2 sing Y N 174 HIS CE1 HE1 sing N N 175 HIS NE2 HE2 sing N N 176 HIS OXT HXT sing N N 177 HOH O H1 sing N N 178 HOH O H2 sing N N 179 ILE N CA sing N N 180 ILE N H sing N N 181 ILE N H2 sing N N 182 ILE CA C sing N N 183 ILE CA CB sing N N 184 ILE CA HA sing N N 185 ILE C O doub N N 186 ILE C OXT sing N N 187 ILE CB CG1 sing N N 188 ILE CB CG2 sing N N 189 ILE CB HB sing N N 190 ILE CG1 CD1 sing N N 191 ILE CG1 HG12 sing N N 192 ILE CG1 HG13 sing N N 193 ILE CG2 HG21 sing N N 194 ILE CG2 HG22 sing N N 195 ILE CG2 HG23 sing N N 196 ILE CD1 HD11 sing N N 197 ILE CD1 HD12 sing N N 198 ILE CD1 HD13 sing N N 199 ILE OXT HXT sing N N 200 LEU N CA sing N N 201 LEU N H sing N N 202 LEU N H2 sing N N 203 LEU CA C sing N N 204 LEU CA CB sing N N 205 LEU CA HA sing N N 206 LEU C O doub N N 207 LEU C OXT sing N N 208 LEU CB CG sing N N 209 LEU CB HB2 sing N N 210 LEU CB HB3 sing N N 211 LEU CG CD1 sing N N 212 LEU CG CD2 sing N N 213 LEU CG HG sing N N 214 LEU CD1 HD11 sing N N 215 LEU CD1 HD12 sing N N 216 LEU CD1 HD13 sing N N 217 LEU CD2 HD21 sing N N 218 LEU CD2 HD22 sing N N 219 LEU CD2 HD23 sing N N 220 LEU OXT HXT sing N N 221 LYS N CA sing N N 222 LYS N H sing N N 223 LYS N H2 sing N N 224 LYS CA C sing N N 225 LYS CA CB sing N N 226 LYS CA HA sing N N 227 LYS C O doub N N 228 LYS C OXT sing N N 229 LYS CB CG sing N N 230 LYS CB HB2 sing N N 231 LYS CB HB3 sing N N 232 LYS CG CD sing N N 233 LYS CG HG2 sing N N 234 LYS CG HG3 sing N N 235 LYS CD CE sing N N 236 LYS CD HD2 sing N N 237 LYS CD HD3 sing N N 238 LYS CE NZ sing N N 239 LYS CE HE2 sing N N 240 LYS CE HE3 sing N N 241 LYS NZ HZ1 sing N N 242 LYS NZ HZ2 sing N N 243 LYS NZ HZ3 sing N N 244 LYS OXT HXT sing N N 245 MET N CA sing N N 246 MET N H sing N N 247 MET N H2 sing N N 248 MET CA C sing N N 249 MET CA CB sing N N 250 MET CA HA sing N N 251 MET C O doub N N 252 MET C OXT sing N N 253 MET CB CG sing N N 254 MET CB HB2 sing N N 255 MET CB HB3 sing N N 256 MET CG SD sing N N 257 MET CG HG2 sing N N 258 MET CG HG3 sing N N 259 MET SD CE sing N N 260 MET CE HE1 sing N N 261 MET CE HE2 sing N N 262 MET CE HE3 sing N N 263 MET OXT HXT sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 VAL N CA sing N N 386 VAL N H sing N N 387 VAL N H2 sing N N 388 VAL CA C sing N N 389 VAL CA CB sing N N 390 VAL CA HA sing N N 391 VAL C O doub N N 392 VAL C OXT sing N N 393 VAL CB CG1 sing N N 394 VAL CB CG2 sing N N 395 VAL CB HB sing N N 396 VAL CG1 HG11 sing N N 397 VAL CG1 HG12 sing N N 398 VAL CG1 HG13 sing N N 399 VAL CG2 HG21 sing N N 400 VAL CG2 HG22 sing N N 401 VAL CG2 HG23 sing N N 402 VAL OXT HXT sing N N 403 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6K4Z _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8YTP _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.028027 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016281 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011259 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_