HEADER IMMUNE SYSTEM 31-MAR-24 8YWP TITLE CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF ANTI-IL-6 ANTIBODY I9H COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAVY CHAIN OF THE FAB FRAGMENT OF ANTI-IL-6 ANTIBODY I9H; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: LIGHT CHAIN OF THE FAB FRAGMENT OF ANTI-IL-6 ANTIBODY I9H; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: CHO-IL69HUM; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 9 ORGANISM_TAXID: 9606; SOURCE 10 EXPRESSION_SYSTEM: CRICETULUS GRISEUS; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 10029; SOURCE 12 EXPRESSION_SYSTEM_STRAIN: CHO-IL69HUM KEYWDS INTERLEUKIN, DIMER, SWAP, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR A.YUDENKO,S.BUKHDRUKER,I.ELISEEV,S.RODIN,A.BURTSEVA,A.PETROV, AUTHOR 2 O.ZLOBINA,A.ISCHENKO,V.BORSHCHEVSKIY REVDAT 1 06-NOV-24 8YWP 0 JRNL AUTH A.YUDENKO,S.BUKHDRUKER,P.SHISHKIN,S.RODIN,A.BURTSEVA, JRNL AUTH 2 A.PETROV,N.PIGAREVA,A.SOKOLOV,E.ZINOVEV,I.ELISEEV,A.REMEEVA, JRNL AUTH 3 E.MARIN,A.MISHIN,V.GODELIY,I.GUSHCHIN,A.ISCHENKO, JRNL AUTH 4 V.BORSHCHEVSKIY JRNL TITL STRUCTURAL BASIS OF SIGNALING COMPLEX INHIBITION BY IL-6 JRNL TITL 2 DOMAIN-SWAPPED DIMERS JRNL REF STRUCTURE 2025 JRNL REFN ISSN 0969-2126 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18_3855 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 22927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.260 REMARK 3 R VALUE (WORKING SET) : 0.258 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.570 REMARK 3 FREE R VALUE TEST SET COUNT : 1965 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.7900 - 6.0200 0.99 1723 159 0.2127 0.2295 REMARK 3 2 6.0200 - 4.7800 1.00 1606 152 0.1866 0.2411 REMARK 3 3 4.7800 - 4.1800 1.00 1597 148 0.1803 0.1877 REMARK 3 4 4.1800 - 3.8000 0.95 1488 140 0.2578 0.2691 REMARK 3 5 3.8000 - 3.5200 0.87 1363 128 0.3372 0.3320 REMARK 3 6 3.5200 - 3.3200 0.99 1543 146 0.2810 0.3234 REMARK 3 7 3.3200 - 3.1500 1.00 1556 146 0.2790 0.3069 REMARK 3 8 3.1500 - 3.0100 1.00 1532 144 0.2885 0.3339 REMARK 3 9 3.0100 - 2.9000 1.00 1542 144 0.2772 0.3344 REMARK 3 10 2.9000 - 2.8000 1.00 1541 145 0.2921 0.3261 REMARK 3 11 2.8000 - 2.7100 1.00 1533 145 0.3197 0.3591 REMARK 3 12 2.7100 - 2.6300 0.98 1502 140 0.3456 0.3658 REMARK 3 13 2.6300 - 2.5600 0.86 1318 121 0.3511 0.4106 REMARK 3 14 2.5600 - 2.5000 0.73 1118 107 0.3638 0.3760 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.416 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.229 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3445 REMARK 3 ANGLE : 0.587 4694 REMARK 3 CHIRALITY : 0.042 534 REMARK 3 PLANARITY : 0.004 595 REMARK 3 DIHEDRAL : 14.006 1224 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN H AND RESID 1:124) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7415 46.9194 82.1094 REMARK 3 T TENSOR REMARK 3 T11: 0.1763 T22: 0.4587 REMARK 3 T33: 0.3393 T12: 0.0134 REMARK 3 T13: 0.0058 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.8912 L22: 1.9809 REMARK 3 L33: 1.4571 L12: -0.8356 REMARK 3 L13: 0.3542 L23: -0.1056 REMARK 3 S TENSOR REMARK 3 S11: -0.0204 S12: -0.2035 S13: -0.0642 REMARK 3 S21: 0.0128 S22: 0.0131 S23: 0.1954 REMARK 3 S31: -0.0997 S32: -0.2561 S33: 0.0026 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN H AND RESID 125:231) REMARK 3 ORIGIN FOR THE GROUP (A): 34.3149 29.6317 64.9009 REMARK 3 T TENSOR REMARK 3 T11: 0.2982 T22: 0.3378 REMARK 3 T33: 0.3026 T12: 0.0003 REMARK 3 T13: -0.0143 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.8386 L22: 1.7129 REMARK 3 L33: 0.8156 L12: 0.5406 REMARK 3 L13: -0.5706 L23: 0.4040 REMARK 3 S TENSOR REMARK 3 S11: 0.0249 S12: 0.0927 S13: 0.0140 REMARK 3 S21: -0.1673 S22: -0.0858 S23: 0.0024 REMARK 3 S31: 0.0853 S32: -0.1300 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN L AND RESID 1:107) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6298 39.8758 98.1478 REMARK 3 T TENSOR REMARK 3 T11: 0.3652 T22: 0.4739 REMARK 3 T33: 0.3236 T12: 0.0408 REMARK 3 T13: 0.0257 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.3992 L22: 0.7789 REMARK 3 L33: 0.9977 L12: -0.0414 REMARK 3 L13: 0.3853 L23: -0.3633 REMARK 3 S TENSOR REMARK 3 S11: 0.0492 S12: -0.0651 S13: -0.0008 REMARK 3 S21: 0.1167 S22: -0.0044 S23: 0.0165 REMARK 3 S31: -0.0833 S32: -0.2100 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN L AND RESID 108:214) REMARK 3 ORIGIN FOR THE GROUP (A): 48.8354 33.1372 70.2865 REMARK 3 T TENSOR REMARK 3 T11: 0.3328 T22: 0.3799 REMARK 3 T33: 0.3615 T12: 0.0653 REMARK 3 T13: 0.0192 T23: 0.0512 REMARK 3 L TENSOR REMARK 3 L11: 0.9989 L22: 0.0947 REMARK 3 L33: 1.4629 L12: 0.1461 REMARK 3 L13: -0.9779 L23: 0.1200 REMARK 3 S TENSOR REMARK 3 S11: 0.0664 S12: 0.1111 S13: 0.0992 REMARK 3 S21: -0.0914 S22: -0.0050 S23: -0.0773 REMARK 3 S31: 0.2309 S32: 0.1089 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8YWP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300046427. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.6 - 8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : SEALED TUBE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER IMUS MICROFOCUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.542 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : APEX II CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20190315 REMARK 200 DATA SCALING SOFTWARE : XSCALE 20190315 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23296 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 23.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: 4YK4 REMARK 200 REMARK 200 REMARK: BIPYRAMID REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM TRIS-HCL, 20% PEG 20000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.57333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.78667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 95.57333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 47.78667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 95.57333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 47.78667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 95.57333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 47.78667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH H 353 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 139 REMARK 465 LYS H 140 REMARK 465 SER H 141 REMARK 465 THR H 142 REMARK 465 SER H 143 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 5 CE NZ REMARK 470 LYS H 77 CG CD CE NZ REMARK 470 LYS H 217 CE NZ REMARK 470 LYS H 225 CE NZ REMARK 470 LYS L 107 CE NZ REMARK 470 LYS L 126 CE NZ REMARK 470 GLU L 143 CD OE1 OE2 REMARK 470 LYS L 145 CD CE NZ REMARK 470 LYS L 188 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR H 15 -12.00 68.37 REMARK 500 LEU H 50 -63.45 -109.93 REMARK 500 ASP H 155 67.64 62.38 REMARK 500 SER L 30 -130.89 58.84 REMARK 500 ALA L 51 -24.56 68.95 REMARK 500 SER L 52 -1.14 -146.97 REMARK 500 ASN L 138 76.01 57.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PGE L 1002 DBREF 8YWP H 1 231 PDB 8YWP 8YWP 1 231 DBREF 8YWP L 1 214 PDB 8YWP 8YWP 1 214 SEQRES 1 H 231 GLN ILE THR LEU LYS GLU SER GLY PRO ALA LEU VAL LYS SEQRES 2 H 231 PRO THR GLN THR LEU THR LEU THR CYS THR PHE SER GLY SEQRES 3 H 231 PHE SER LEU SER THR SER GLY MET GLY VAL GLY TRP ILE SEQRES 4 H 231 ARG GLN PRO PRO GLY LYS ALA LEU GLU TRP LEU ALA HIS SEQRES 5 H 231 ILE TRP TRP ASP ASP ASP LYS TYR TYR ASN PRO SER LEU SEQRES 6 H 231 LYS SER ARG LEU THR ILE SER LYS ASP THR SER LYS ASN SEQRES 7 H 231 GLN VAL VAL LEU THR MET THR ASN MET ASP PRO VAL ASP SEQRES 8 H 231 THR ALA THR TYR TYR CYS ALA ARG ARG ALA ASN TYR GLY SEQRES 9 H 231 THR SER TYR ASP TYR GLY MET ASP TYR TRP GLY GLN GLY SEQRES 10 H 231 THR LEU VAL THR VAL SER SER ALA SER THR LYS GLY PRO SEQRES 11 H 231 SER VAL PHE PRO LEU ALA PRO SER SER LYS SER THR SER SEQRES 12 H 231 GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR SEQRES 13 H 231 PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA SEQRES 14 H 231 LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SEQRES 15 H 231 SER SER GLY LEU TYR SER LEU SER SER VAL VAL THR VAL SEQRES 16 H 231 PRO SER SER SER LEU GLY THR GLN THR TYR ILE CYS ASN SEQRES 17 H 231 VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS SEQRES 18 H 231 VAL GLU PRO LYS SER CYS ASP LYS THR HIS SEQRES 1 L 214 ASP VAL VAL MET THR GLN SER PRO SER SER LEU SER ALA SEQRES 2 L 214 SER VAL GLY ASP ARG VAL THR ILE THR CYS LYS ALA SER SEQRES 3 L 214 GLN SER VAL SER ASP VAL LEU THR TRP TYR GLN GLN LYS SEQRES 4 L 214 PRO GLY LYS ALA PRO LYS LEU LEU ILE TYR TYR ALA SER SEQRES 5 L 214 ASN ARG TYR THR GLY VAL PRO SER ARG PHE SER GLY SER SEQRES 6 L 214 GLY SER GLY THR ASP PHE THR LEU THR ILE SER SER LEU SEQRES 7 L 214 GLN PRO GLU ASP PHE ALA THR TYR TYR CYS GLN GLN GLY SEQRES 8 L 214 TYR ARG SER PRO TYR THR PHE GLY GLY GLY THR LYS LEU SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS HET GOL L1001 6 HET PGE L1002 7 HET GOL L1003 6 HETNAM GOL GLYCEROL HETNAM PGE TRIETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 PGE C6 H14 O4 FORMUL 6 HOH *136(H2 O) HELIX 1 AA1 PRO H 63 LYS H 66 5 4 HELIX 2 AA2 ASP H 88 THR H 92 5 5 HELIX 3 AA3 SER H 198 GLY H 201 5 4 HELIX 4 AA4 LYS H 212 ASN H 215 5 4 HELIX 5 AA5 GLN L 79 PHE L 83 5 5 HELIX 6 AA6 SER L 121 GLY L 128 1 8 HELIX 7 AA7 LYS L 183 GLU L 187 1 5 SHEET 1 AA1 4 THR H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O THR H 21 N SER H 7 SHEET 3 AA1 4 GLN H 79 MET H 84 -1 O MET H 84 N LEU H 18 SHEET 4 AA1 4 LEU H 69 ASP H 74 -1 N THR H 70 O THR H 83 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 118 VAL H 122 1 O THR H 121 N VAL H 12 SHEET 3 AA2 6 ALA H 93 ARG H 100 -1 N TYR H 95 O THR H 118 SHEET 4 AA2 6 GLY H 35 GLN H 41 -1 N ILE H 39 O TYR H 96 SHEET 5 AA2 6 GLU H 48 TRP H 54 -1 O LEU H 50 N TRP H 38 SHEET 6 AA2 6 LYS H 59 TYR H 61 -1 O TYR H 60 N HIS H 52 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 118 VAL H 122 1 O THR H 121 N VAL H 12 SHEET 3 AA3 4 ALA H 93 ARG H 100 -1 N TYR H 95 O THR H 118 SHEET 4 AA3 4 TYR H 113 TRP H 114 -1 O TYR H 113 N ARG H 99 SHEET 1 AA4 4 SER H 131 LEU H 135 0 SHEET 2 AA4 4 THR H 146 TYR H 156 -1 O LEU H 152 N PHE H 133 SHEET 3 AA4 4 TYR H 187 PRO H 196 -1 O VAL H 195 N ALA H 147 SHEET 4 AA4 4 VAL H 174 THR H 176 -1 N HIS H 175 O VAL H 192 SHEET 1 AA5 4 SER H 131 LEU H 135 0 SHEET 2 AA5 4 THR H 146 TYR H 156 -1 O LEU H 152 N PHE H 133 SHEET 3 AA5 4 TYR H 187 PRO H 196 -1 O VAL H 195 N ALA H 147 SHEET 4 AA5 4 VAL H 180 LEU H 181 -1 N VAL H 180 O SER H 188 SHEET 1 AA6 3 THR H 162 TRP H 165 0 SHEET 2 AA6 3 ILE H 206 HIS H 211 -1 O ASN H 208 N SER H 164 SHEET 3 AA6 3 THR H 216 LYS H 221 -1 O VAL H 218 N VAL H 209 SHEET 1 AA7 4 MET L 4 SER L 7 0 SHEET 2 AA7 4 VAL L 19 ALA L 25 -1 O LYS L 24 N THR L 5 SHEET 3 AA7 4 ASP L 70 ILE L 75 -1 O LEU L 73 N ILE L 21 SHEET 4 AA7 4 PHE L 62 SER L 67 -1 N SER L 63 O THR L 74 SHEET 1 AA8 6 SER L 10 SER L 14 0 SHEET 2 AA8 6 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA8 6 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA8 6 LEU L 33 GLN L 38 -1 N THR L 34 O GLN L 89 SHEET 5 AA8 6 LYS L 45 TYR L 49 -1 O LYS L 45 N GLN L 37 SHEET 6 AA8 6 ASN L 53 ARG L 54 -1 O ASN L 53 N TYR L 49 SHEET 1 AA9 4 SER L 10 SER L 14 0 SHEET 2 AA9 4 THR L 102 LYS L 107 1 O GLU L 105 N LEU L 11 SHEET 3 AA9 4 ALA L 84 GLN L 90 -1 N ALA L 84 O LEU L 104 SHEET 4 AA9 4 THR L 97 PHE L 98 -1 O THR L 97 N GLN L 90 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N GLN L 160 O THR L 178 SHEET 1 AB2 4 ALA L 153 LEU L 154 0 SHEET 2 AB2 4 ALA L 144 VAL L 150 -1 N VAL L 150 O ALA L 153 SHEET 3 AB2 4 VAL L 191 HIS L 198 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SSBOND 1 CYS H 22 CYS H 97 1555 1555 2.04 SSBOND 2 CYS H 151 CYS H 207 1555 1555 2.03 SSBOND 3 CYS H 227 CYS L 214 1555 1555 2.03 SSBOND 4 CYS L 23 CYS L 88 1555 1555 2.03 SSBOND 5 CYS L 134 CYS L 194 1555 1555 2.03 CISPEP 1 PHE H 157 PRO H 158 0 -4.43 CISPEP 2 GLU H 159 PRO H 160 0 5.08 CISPEP 3 SER L 7 PRO L 8 0 -3.56 CISPEP 4 SER L 94 PRO L 95 0 5.62 CISPEP 5 TYR L 140 PRO L 141 0 1.87 CRYST1 126.360 126.360 143.360 90.00 90.00 120.00 P 62 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007914 0.004569 0.000000 0.00000 SCALE2 0.000000 0.009138 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006975 0.00000