HEADER TRANSPORT PROTEIN 02-APR-24 8YXB TITLE CRYSTAL STRUCTURE OF THE HSA COMPLEX WITH CEFTRIAXONE AND MYRISTATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERUM ALBUMIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ALB, GIG20, GIG42, PRO0903, PRO1708, PRO2044, PRO2619, SOURCE 6 PRO2675, UNQ696/PRO1341; SOURCE 7 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS HUMAN SERUM ALBUMIN, ANTIBIOTICS COMPLEX, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.KAWAI REVDAT 2 04-SEP-24 8YXB 1 JRNL REVDAT 1 07-AUG-24 8YXB 0 JRNL AUTH A.KAWAI,K.YAMASAKI,M.OTAGIRI,Y.DOI JRNL TITL INTERACTION OF CEPHALOSPORINS WITH HUMAN SERUM ALBUMIN: A JRNL TITL 2 STRUCTURAL STUDY. JRNL REF J.MED.CHEM. V. 67 14175 2024 JRNL REFN ISSN 0022-2623 JRNL PMID 39083648 JRNL DOI 10.1021/ACS.JMEDCHEM.4C00983 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.26 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 63307 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.235 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3165 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.2600 - 6.2400 0.99 2640 140 0.1703 0.1920 REMARK 3 2 6.2400 - 4.9600 0.99 2648 139 0.2114 0.2455 REMARK 3 3 4.9600 - 4.3300 0.99 2622 138 0.1893 0.2201 REMARK 3 4 4.3300 - 3.9400 0.99 2640 139 0.1989 0.2135 REMARK 3 5 3.9400 - 3.6600 0.99 2670 140 0.2204 0.2365 REMARK 3 6 3.6600 - 3.4400 0.99 2656 140 0.2367 0.2873 REMARK 3 7 3.4400 - 3.2700 0.99 2566 135 0.2694 0.3097 REMARK 3 8 3.2700 - 3.1300 0.99 2681 141 0.2674 0.3037 REMARK 3 9 3.1300 - 3.0100 0.99 2583 136 0.2795 0.3420 REMARK 3 10 3.0100 - 2.9000 0.98 2656 140 0.2833 0.3270 REMARK 3 11 2.9000 - 2.8100 0.98 2601 136 0.2881 0.3229 REMARK 3 12 2.8100 - 2.7300 0.98 2633 139 0.2973 0.2976 REMARK 3 13 2.7300 - 2.6600 0.98 2616 138 0.2893 0.3301 REMARK 3 14 2.6600 - 2.5900 0.99 2558 134 0.2928 0.3411 REMARK 3 15 2.5900 - 2.5400 0.98 2646 140 0.2948 0.3395 REMARK 3 16 2.5300 - 2.4800 0.98 2601 136 0.2777 0.3903 REMARK 3 17 2.4800 - 2.4300 0.98 2571 135 0.2853 0.3122 REMARK 3 18 2.4300 - 2.3900 0.98 2673 141 0.2874 0.3066 REMARK 3 19 2.3900 - 2.3400 0.97 2585 136 0.2901 0.3270 REMARK 3 20 2.3400 - 2.3000 0.98 2561 135 0.2851 0.3029 REMARK 3 21 2.3000 - 2.2700 0.98 2639 139 0.3136 0.3220 REMARK 3 22 2.2700 - 2.2300 0.97 2587 136 0.3332 0.4067 REMARK 3 23 2.2300 - 2.2000 0.94 2509 132 0.3273 0.3603 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.626 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 50.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 67.71 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 9249 REMARK 3 ANGLE : 0.386 12485 REMARK 3 CHIRALITY : 0.033 1393 REMARK 3 PLANARITY : 0.003 1625 REMARK 3 DIHEDRAL : 14.966 3481 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 3:173 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.425 -3.423 -22.398 REMARK 3 T TENSOR REMARK 3 T11: 0.4217 T22: 0.3148 REMARK 3 T33: 0.3758 T12: -0.0363 REMARK 3 T13: 0.0490 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 2.7450 L22: 4.1546 REMARK 3 L33: 2.9328 L12: -1.5864 REMARK 3 L13: 1.2742 L23: -1.6675 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0246 S13: -0.1271 REMARK 3 S21: -0.1156 S22: 0.0053 S23: 0.0421 REMARK 3 S31: -0.0501 S32: -0.1244 S33: -0.0267 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 174:373 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.575 15.231 3.524 REMARK 3 T TENSOR REMARK 3 T11: 0.4355 T22: 0.4125 REMARK 3 T33: 0.4276 T12: -0.0184 REMARK 3 T13: -0.0803 T23: -0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.8467 L22: 5.2595 REMARK 3 L33: 1.7266 L12: -0.9811 REMARK 3 L13: -0.1286 L23: 1.5935 REMARK 3 S TENSOR REMARK 3 S11: -0.1643 S12: -0.1456 S13: 0.0759 REMARK 3 S21: 0.2072 S22: 0.2052 S23: -0.6096 REMARK 3 S31: -0.1593 S32: 0.0963 S33: -0.0705 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 374:581 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.202 -12.436 17.231 REMARK 3 T TENSOR REMARK 3 T11: 0.8913 T22: 0.5715 REMARK 3 T33: 0.8058 T12: -0.0393 REMARK 3 T13: -0.0991 T23: 0.0439 REMARK 3 L TENSOR REMARK 3 L11: 1.7155 L22: 4.8627 REMARK 3 L33: 2.3594 L12: 1.1817 REMARK 3 L13: 0.1607 L23: 0.0318 REMARK 3 S TENSOR REMARK 3 S11: -0.0705 S12: -0.0662 S13: -0.4808 REMARK 3 S21: 0.3342 S22: 0.1141 S23: -0.0560 REMARK 3 S31: 0.4600 S32: -0.1916 S33: -0.0526 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 3:305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.209 44.752 -15.794 REMARK 3 T TENSOR REMARK 3 T11: 0.4066 T22: 0.3643 REMARK 3 T33: 0.4668 T12: 0.0271 REMARK 3 T13: -0.0445 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 0.7815 L22: 1.1397 REMARK 3 L33: 1.4294 L12: -0.0062 REMARK 3 L13: 0.2900 L23: 0.7471 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.0203 S13: -0.0017 REMARK 3 S21: 0.1602 S22: 0.0213 S23: -0.1566 REMARK 3 S31: 0.0654 S32: -0.0117 S33: 6.1970 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: ( CHAIN B AND RESID 306:584 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.490 51.004 -46.908 REMARK 3 T TENSOR REMARK 3 T11: 0.5051 T22: 0.5437 REMARK 3 T33: 0.3981 T12: 0.0333 REMARK 3 T13: 0.0484 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 1.1358 L22: 8.7637 REMARK 3 L33: 1.9005 L12: -1.0281 REMARK 3 L13: -0.5092 L23: -0.4621 REMARK 3 S TENSOR REMARK 3 S11: 0.0652 S12: 0.1072 S13: 0.3172 REMARK 3 S21: -0.3456 S22: 0.0334 S23: 0.1317 REMARK 3 S31: -0.5095 S32: -0.2383 S33: -0.0780 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8YXB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300046591. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63358 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 45.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : 0.05500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.33 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.71400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.320 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 32% PEG 3350, 50MM POTASSIUM PHOSPHATE REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 560 REMARK 465 ALA A 561 REMARK 465 ASP A 562 REMARK 465 ASP A 563 REMARK 465 LYS A 564 REMARK 465 GLU A 565 REMARK 465 THR A 566 REMARK 465 CYS A 567 REMARK 465 ALA A 582 REMARK 465 LEU A 583 REMARK 465 GLY A 584 REMARK 465 LEU A 585 REMARK 465 ASP B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 560 REMARK 465 ALA B 561 REMARK 465 ASP B 562 REMARK 465 LEU B 585 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 4 CG CD CE NZ REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 GLU A 82 CG CD OE1 OE2 REMARK 470 GLN A 204 CG CD OE1 NE2 REMARK 470 LYS A 276 CG CD CE NZ REMARK 470 GLU A 280 CG CD OE1 OE2 REMARK 470 ASP A 301 CG OD1 OD2 REMARK 470 LYS A 313 CG CD CE NZ REMARK 470 LYS A 359 CE NZ REMARK 470 LYS A 372 CG CD CE NZ REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 LYS A 402 CG CD CE NZ REMARK 470 LYS A 436 CD CE NZ REMARK 470 LYS A 439 CG CD CE NZ REMARK 470 VAL A 462 CG1 CG2 REMARK 470 GLU A 465 CG CD OE1 OE2 REMARK 470 LYS A 466 CG CD CE NZ REMARK 470 VAL A 469 CG1 CG2 REMARK 470 LEU A 481 CG CD1 CD2 REMARK 470 GLU A 495 CG CD OE1 OE2 REMARK 470 VAL A 498 CG1 CG2 REMARK 470 GLU A 501 CG CD OE1 OE2 REMARK 470 PHE A 502 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 505 CG CD OE1 OE2 REMARK 470 PHE A 507 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE A 509 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASP A 512 CG OD1 OD2 REMARK 470 ILE A 513 CG1 CG2 CD1 REMARK 470 LYS A 519 CG CD CE NZ REMARK 470 GLU A 520 CG CD OE1 OE2 REMARK 470 ARG A 521 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 524 CG CD CE NZ REMARK 470 LYS A 525 CG CD CE NZ REMARK 470 LYS A 536 CG CD CE NZ REMARK 470 LYS A 538 CG CD CE NZ REMARK 470 LYS A 541 CG CD CE NZ REMARK 470 PHE A 554 CG CD1 CD2 CE1 CE2 CZ REMARK 470 VAL A 555 CG1 CG2 REMARK 470 LYS A 557 CG CD CE NZ REMARK 470 PHE A 568 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 570 CG CD OE1 OE2 REMARK 470 GLU A 571 CG CD OE1 OE2 REMARK 470 LYS A 573 CG CD CE NZ REMARK 470 LYS A 574 CG CD CE NZ REMARK 470 LEU A 575 CG CD1 CD2 REMARK 470 LYS B 4 CG CD CE NZ REMARK 470 GLU B 57 CG CD OE1 OE2 REMARK 470 GLU B 82 CG CD OE1 OE2 REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 ASN B 109 CG OD1 ND2 REMARK 470 LYS B 159 CD CE NZ REMARK 470 LYS B 205 CG CD CE NZ REMARK 470 PHE B 206 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS B 313 CG CD CE NZ REMARK 470 LYS B 372 CG CD CE NZ REMARK 470 LYS B 402 CG CD CE NZ REMARK 470 GLU B 465 CG CD OE1 OE2 REMARK 470 LEU B 481 CG CD1 CD2 REMARK 470 GLU B 501 CG CD OE1 OE2 REMARK 470 GLU B 505 CG CD OE1 OE2 REMARK 470 PHE B 507 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PHE B 509 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 518 CG CD OE1 OE2 REMARK 470 LYS B 519 CG CD CE NZ REMARK 470 GLU B 520 CG CD OE1 OE2 REMARK 470 LYS B 524 CD CE NZ REMARK 470 LYS B 536 CG CD CE NZ REMARK 470 LYS B 557 CG CD CE NZ REMARK 470 LYS B 564 CG CD CE NZ REMARK 470 GLU B 565 CG CD OE1 OE2 REMARK 470 THR B 566 OG1 CG2 REMARK 470 PHE B 568 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU B 570 CG CD OE1 OE2 REMARK 470 LYS B 573 CG CD CE NZ REMARK 470 LYS B 574 CG CD CE NZ REMARK 470 LEU B 575 CG CD1 CD2 REMARK 470 GLN B 580 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 31 72.35 -105.23 REMARK 500 ILE A 271 -66.26 -131.15 REMARK 500 ALA A 300 -15.93 66.48 REMARK 500 VAL A 310 -58.13 -130.68 REMARK 500 VAL A 469 -15.71 -144.30 REMARK 500 THR A 496 35.53 -86.71 REMARK 500 LEU B 31 76.93 -111.72 REMARK 500 ASN B 61 -1.38 67.30 REMARK 500 ILE B 271 -64.65 -131.60 REMARK 500 VAL B 310 -53.03 -137.27 REMARK 500 LEU B 398 -158.97 -95.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MYR A 602 REMARK 610 MYR A 603 REMARK 610 MYR A 604 REMARK 610 MYR B 602 REMARK 610 MYR B 603 REMARK 610 MYR B 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8YXA RELATED DB: PDB DBREF 8YXB A 1 585 UNP P02768 ALBU_HUMAN 25 609 DBREF 8YXB B 1 585 UNP P02768 ALBU_HUMAN 25 609 SEQRES 1 A 585 ASP ALA HIS LYS SER GLU VAL ALA HIS ARG PHE LYS ASP SEQRES 2 A 585 LEU GLY GLU GLU ASN PHE LYS ALA LEU VAL LEU ILE ALA SEQRES 3 A 585 PHE ALA GLN TYR LEU GLN GLN CYS PRO PHE GLU ASP HIS SEQRES 4 A 585 VAL LYS LEU VAL ASN GLU VAL THR GLU PHE ALA LYS THR SEQRES 5 A 585 CYS VAL ALA ASP GLU SER ALA GLU ASN CYS ASP LYS SER SEQRES 6 A 585 LEU HIS THR LEU PHE GLY ASP LYS LEU CYS THR VAL ALA SEQRES 7 A 585 THR LEU ARG GLU THR TYR GLY GLU MET ALA ASP CYS CYS SEQRES 8 A 585 ALA LYS GLN GLU PRO GLU ARG ASN GLU CYS PHE LEU GLN SEQRES 9 A 585 HIS LYS ASP ASP ASN PRO ASN LEU PRO ARG LEU VAL ARG SEQRES 10 A 585 PRO GLU VAL ASP VAL MET CYS THR ALA PHE HIS ASP ASN SEQRES 11 A 585 GLU GLU THR PHE LEU LYS LYS TYR LEU TYR GLU ILE ALA SEQRES 12 A 585 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU PHE SEQRES 13 A 585 PHE ALA LYS ARG TYR LYS ALA ALA PHE THR GLU CYS CYS SEQRES 14 A 585 GLN ALA ALA ASP LYS ALA ALA CYS LEU LEU PRO LYS LEU SEQRES 15 A 585 ASP GLU LEU ARG ASP GLU GLY LYS ALA SER SER ALA LYS SEQRES 16 A 585 GLN ARG LEU LYS CYS ALA SER LEU GLN LYS PHE GLY GLU SEQRES 17 A 585 ARG ALA PHE LYS ALA TRP ALA VAL ALA ARG LEU SER GLN SEQRES 18 A 585 ARG PHE PRO LYS ALA GLU PHE ALA GLU VAL SER LYS LEU SEQRES 19 A 585 VAL THR ASP LEU THR LYS VAL HIS THR GLU CYS CYS HIS SEQRES 20 A 585 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 A 585 ALA LYS TYR ILE CYS GLU ASN GLN ASP SER ILE SER SER SEQRES 22 A 585 LYS LEU LYS GLU CYS CYS GLU LYS PRO LEU LEU GLU LYS SEQRES 23 A 585 SER HIS CYS ILE ALA GLU VAL GLU ASN ASP GLU MET PRO SEQRES 24 A 585 ALA ASP LEU PRO SER LEU ALA ALA ASP PHE VAL GLU SER SEQRES 25 A 585 LYS ASP VAL CYS LYS ASN TYR ALA GLU ALA LYS ASP VAL SEQRES 26 A 585 PHE LEU GLY MET PHE LEU TYR GLU TYR ALA ARG ARG HIS SEQRES 27 A 585 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU ALA LYS SEQRES 28 A 585 THR TYR GLU THR THR LEU GLU LYS CYS CYS ALA ALA ALA SEQRES 29 A 585 ASP PRO HIS GLU CYS TYR ALA LYS VAL PHE ASP GLU PHE SEQRES 30 A 585 LYS PRO LEU VAL GLU GLU PRO GLN ASN LEU ILE LYS GLN SEQRES 31 A 585 ASN CYS GLU LEU PHE GLU GLN LEU GLY GLU TYR LYS PHE SEQRES 32 A 585 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 A 585 GLN VAL SER THR PRO THR LEU VAL GLU VAL SER ARG ASN SEQRES 34 A 585 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 A 585 ALA LYS ARG MET PRO CYS ALA GLU ASP TYR LEU SER VAL SEQRES 36 A 585 VAL LEU ASN GLN LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 A 585 VAL SER ASP ARG VAL THR LYS CYS CYS THR GLU SER LEU SEQRES 38 A 585 VAL ASN ARG ARG PRO CYS PHE SER ALA LEU GLU VAL ASP SEQRES 39 A 585 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 A 585 THR PHE HIS ALA ASP ILE CYS THR LEU SER GLU LYS GLU SEQRES 41 A 585 ARG GLN ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 A 585 LYS HIS LYS PRO LYS ALA THR LYS GLU GLN LEU LYS ALA SEQRES 43 A 585 VAL MET ASP ASP PHE ALA ALA PHE VAL GLU LYS CYS CYS SEQRES 44 A 585 LYS ALA ASP ASP LYS GLU THR CYS PHE ALA GLU GLU GLY SEQRES 45 A 585 LYS LYS LEU VAL ALA ALA SER GLN ALA ALA LEU GLY LEU SEQRES 1 B 585 ASP ALA HIS LYS SER GLU VAL ALA HIS ARG PHE LYS ASP SEQRES 2 B 585 LEU GLY GLU GLU ASN PHE LYS ALA LEU VAL LEU ILE ALA SEQRES 3 B 585 PHE ALA GLN TYR LEU GLN GLN CYS PRO PHE GLU ASP HIS SEQRES 4 B 585 VAL LYS LEU VAL ASN GLU VAL THR GLU PHE ALA LYS THR SEQRES 5 B 585 CYS VAL ALA ASP GLU SER ALA GLU ASN CYS ASP LYS SER SEQRES 6 B 585 LEU HIS THR LEU PHE GLY ASP LYS LEU CYS THR VAL ALA SEQRES 7 B 585 THR LEU ARG GLU THR TYR GLY GLU MET ALA ASP CYS CYS SEQRES 8 B 585 ALA LYS GLN GLU PRO GLU ARG ASN GLU CYS PHE LEU GLN SEQRES 9 B 585 HIS LYS ASP ASP ASN PRO ASN LEU PRO ARG LEU VAL ARG SEQRES 10 B 585 PRO GLU VAL ASP VAL MET CYS THR ALA PHE HIS ASP ASN SEQRES 11 B 585 GLU GLU THR PHE LEU LYS LYS TYR LEU TYR GLU ILE ALA SEQRES 12 B 585 ARG ARG HIS PRO TYR PHE TYR ALA PRO GLU LEU LEU PHE SEQRES 13 B 585 PHE ALA LYS ARG TYR LYS ALA ALA PHE THR GLU CYS CYS SEQRES 14 B 585 GLN ALA ALA ASP LYS ALA ALA CYS LEU LEU PRO LYS LEU SEQRES 15 B 585 ASP GLU LEU ARG ASP GLU GLY LYS ALA SER SER ALA LYS SEQRES 16 B 585 GLN ARG LEU LYS CYS ALA SER LEU GLN LYS PHE GLY GLU SEQRES 17 B 585 ARG ALA PHE LYS ALA TRP ALA VAL ALA ARG LEU SER GLN SEQRES 18 B 585 ARG PHE PRO LYS ALA GLU PHE ALA GLU VAL SER LYS LEU SEQRES 19 B 585 VAL THR ASP LEU THR LYS VAL HIS THR GLU CYS CYS HIS SEQRES 20 B 585 GLY ASP LEU LEU GLU CYS ALA ASP ASP ARG ALA ASP LEU SEQRES 21 B 585 ALA LYS TYR ILE CYS GLU ASN GLN ASP SER ILE SER SER SEQRES 22 B 585 LYS LEU LYS GLU CYS CYS GLU LYS PRO LEU LEU GLU LYS SEQRES 23 B 585 SER HIS CYS ILE ALA GLU VAL GLU ASN ASP GLU MET PRO SEQRES 24 B 585 ALA ASP LEU PRO SER LEU ALA ALA ASP PHE VAL GLU SER SEQRES 25 B 585 LYS ASP VAL CYS LYS ASN TYR ALA GLU ALA LYS ASP VAL SEQRES 26 B 585 PHE LEU GLY MET PHE LEU TYR GLU TYR ALA ARG ARG HIS SEQRES 27 B 585 PRO ASP TYR SER VAL VAL LEU LEU LEU ARG LEU ALA LYS SEQRES 28 B 585 THR TYR GLU THR THR LEU GLU LYS CYS CYS ALA ALA ALA SEQRES 29 B 585 ASP PRO HIS GLU CYS TYR ALA LYS VAL PHE ASP GLU PHE SEQRES 30 B 585 LYS PRO LEU VAL GLU GLU PRO GLN ASN LEU ILE LYS GLN SEQRES 31 B 585 ASN CYS GLU LEU PHE GLU GLN LEU GLY GLU TYR LYS PHE SEQRES 32 B 585 GLN ASN ALA LEU LEU VAL ARG TYR THR LYS LYS VAL PRO SEQRES 33 B 585 GLN VAL SER THR PRO THR LEU VAL GLU VAL SER ARG ASN SEQRES 34 B 585 LEU GLY LYS VAL GLY SER LYS CYS CYS LYS HIS PRO GLU SEQRES 35 B 585 ALA LYS ARG MET PRO CYS ALA GLU ASP TYR LEU SER VAL SEQRES 36 B 585 VAL LEU ASN GLN LEU CYS VAL LEU HIS GLU LYS THR PRO SEQRES 37 B 585 VAL SER ASP ARG VAL THR LYS CYS CYS THR GLU SER LEU SEQRES 38 B 585 VAL ASN ARG ARG PRO CYS PHE SER ALA LEU GLU VAL ASP SEQRES 39 B 585 GLU THR TYR VAL PRO LYS GLU PHE ASN ALA GLU THR PHE SEQRES 40 B 585 THR PHE HIS ALA ASP ILE CYS THR LEU SER GLU LYS GLU SEQRES 41 B 585 ARG GLN ILE LYS LYS GLN THR ALA LEU VAL GLU LEU VAL SEQRES 42 B 585 LYS HIS LYS PRO LYS ALA THR LYS GLU GLN LEU LYS ALA SEQRES 43 B 585 VAL MET ASP ASP PHE ALA ALA PHE VAL GLU LYS CYS CYS SEQRES 44 B 585 LYS ALA ASP ASP LYS GLU THR CYS PHE ALA GLU GLU GLY SEQRES 45 B 585 LYS LYS LEU VAL ALA ALA SER GLN ALA ALA LEU GLY LEU HET 9F2 A 601 36 HET MYR A 602 13 HET MYR A 603 13 HET MYR A 604 13 HET MYR A 605 16 HET MYR A 606 16 HET 9F2 B 601 36 HET MYR B 602 13 HET MYR B 603 13 HET MYR B 604 13 HET MYR B 605 16 HET MYR B 606 16 HET MYR B 607 16 HETNAM 9F2 CEFTRIAXONE HETNAM MYR MYRISTIC ACID FORMUL 3 9F2 2(C18 H18 N8 O7 S3) FORMUL 4 MYR 11(C14 H28 O2) FORMUL 16 HOH *207(H2 O) HELIX 1 AA1 SER A 5 GLY A 15 1 11 HELIX 2 AA2 GLY A 15 LEU A 31 1 17 HELIX 3 AA3 PRO A 35 ASP A 56 1 22 HELIX 4 AA4 SER A 65 CYS A 75 1 11 HELIX 5 AA5 THR A 76 ALA A 78 5 3 HELIX 6 AA6 THR A 79 GLY A 85 1 7 HELIX 7 AA7 GLU A 86 LYS A 93 5 8 HELIX 8 AA8 GLN A 94 HIS A 105 1 12 HELIX 9 AA9 GLU A 119 ASN A 130 1 12 HELIX 10 AB1 ASN A 130 HIS A 146 1 17 HELIX 11 AB2 TYR A 150 CYS A 169 1 20 HELIX 12 AB3 ASP A 173 PHE A 206 1 34 HELIX 13 AB4 PHE A 206 PHE A 223 1 18 HELIX 14 AB5 GLU A 227 CYS A 246 1 20 HELIX 15 AB6 ASP A 249 ASN A 267 1 19 HELIX 16 AB7 GLN A 268 ILE A 271 5 4 HELIX 17 AB8 LEU A 275 GLU A 280 1 6 HELIX 18 AB9 LYS A 281 LEU A 284 5 4 HELIX 19 AC1 GLU A 285 ALA A 291 1 7 HELIX 20 AC2 LEU A 305 VAL A 310 1 6 HELIX 21 AC3 ASP A 314 ALA A 322 1 9 HELIX 22 AC4 ALA A 322 HIS A 338 1 17 HELIX 23 AC5 SER A 342 CYS A 361 1 20 HELIX 24 AC6 ASP A 365 TYR A 370 1 6 HELIX 25 AC7 LYS A 372 LEU A 398 1 27 HELIX 26 AC8 GLY A 399 VAL A 415 1 17 HELIX 27 AC9 SER A 419 CYS A 438 1 20 HELIX 28 AD1 PRO A 441 GLU A 465 1 25 HELIX 29 AD2 SER A 470 THR A 478 1 9 HELIX 30 AD3 SER A 480 VAL A 482 5 3 HELIX 31 AD4 ASN A 483 LEU A 491 1 9 HELIX 32 AD5 ASN A 503 THR A 508 1 6 HELIX 33 AD6 HIS A 510 THR A 515 5 6 HELIX 34 AD7 SER A 517 LYS A 536 1 20 HELIX 35 AD8 THR A 540 CYS A 558 1 19 HELIX 36 AD9 ALA A 569 GLN A 580 1 12 HELIX 37 AE1 SER B 5 GLY B 15 1 11 HELIX 38 AE2 GLY B 15 LEU B 31 1 17 HELIX 39 AE3 PRO B 35 ASP B 56 1 22 HELIX 40 AE4 SER B 65 CYS B 75 1 11 HELIX 41 AE5 THR B 79 TYR B 84 1 6 HELIX 42 AE6 GLY B 85 LYS B 93 5 9 HELIX 43 AE7 GLN B 94 HIS B 105 1 12 HELIX 44 AE8 GLU B 119 ASN B 130 1 12 HELIX 45 AE9 ASN B 130 HIS B 146 1 17 HELIX 46 AF1 TYR B 150 CYS B 169 1 20 HELIX 47 AF2 ASP B 173 GLY B 207 1 35 HELIX 48 AF3 GLY B 207 PHE B 223 1 17 HELIX 49 AF4 GLU B 227 GLY B 248 1 22 HELIX 50 AF5 ASP B 249 ASN B 267 1 19 HELIX 51 AF6 GLN B 268 ILE B 271 5 4 HELIX 52 AF7 LEU B 275 GLU B 280 1 6 HELIX 53 AF8 LYS B 281 LEU B 284 5 4 HELIX 54 AF9 GLU B 285 GLU B 292 1 8 HELIX 55 AG1 LEU B 305 VAL B 310 1 6 HELIX 56 AG2 ASP B 314 ALA B 322 1 9 HELIX 57 AG3 ALA B 322 HIS B 338 1 17 HELIX 58 AG4 SER B 342 CYS B 361 1 20 HELIX 59 AG5 ASP B 365 TYR B 370 1 6 HELIX 60 AG6 LYS B 372 LEU B 398 1 27 HELIX 61 AG7 GLY B 399 VAL B 415 1 17 HELIX 62 AG8 SER B 419 CYS B 438 1 20 HELIX 63 AG9 PRO B 441 THR B 467 1 27 HELIX 64 AH1 SER B 470 THR B 478 1 9 HELIX 65 AH2 ASN B 483 ALA B 490 1 8 HELIX 66 AH3 HIS B 510 LEU B 516 5 7 HELIX 67 AH4 SER B 517 LYS B 536 1 20 HELIX 68 AH5 THR B 540 CYS B 559 1 20 HELIX 69 AH6 LYS B 564 GLY B 584 1 21 SSBOND 1 CYS A 53 CYS A 62 1555 1555 2.04 SSBOND 2 CYS A 75 CYS A 91 1555 1555 2.03 SSBOND 3 CYS A 90 CYS A 101 1555 1555 2.03 SSBOND 4 CYS A 124 CYS A 169 1555 1555 2.04 SSBOND 5 CYS A 168 CYS A 177 1555 1555 2.04 SSBOND 6 CYS A 200 CYS A 246 1555 1555 2.03 SSBOND 7 CYS A 245 CYS A 253 1555 1555 2.03 SSBOND 8 CYS A 265 CYS A 279 1555 1555 2.03 SSBOND 9 CYS A 278 CYS A 289 1555 1555 2.03 SSBOND 10 CYS A 316 CYS A 361 1555 1555 2.03 SSBOND 11 CYS A 360 CYS A 369 1555 1555 2.03 SSBOND 12 CYS A 392 CYS A 438 1555 1555 2.03 SSBOND 13 CYS A 437 CYS A 448 1555 1555 2.03 SSBOND 14 CYS A 461 CYS A 477 1555 1555 2.03 SSBOND 15 CYS A 476 CYS A 487 1555 1555 2.02 SSBOND 16 CYS A 514 CYS A 559 1555 1555 2.03 SSBOND 17 CYS B 53 CYS B 62 1555 1555 2.03 SSBOND 18 CYS B 75 CYS B 91 1555 1555 2.03 SSBOND 19 CYS B 90 CYS B 101 1555 1555 2.03 SSBOND 20 CYS B 124 CYS B 169 1555 1555 2.04 SSBOND 21 CYS B 168 CYS B 177 1555 1555 2.04 SSBOND 22 CYS B 200 CYS B 246 1555 1555 2.03 SSBOND 23 CYS B 245 CYS B 253 1555 1555 2.03 SSBOND 24 CYS B 265 CYS B 279 1555 1555 2.03 SSBOND 25 CYS B 278 CYS B 289 1555 1555 2.03 SSBOND 26 CYS B 316 CYS B 361 1555 1555 2.03 SSBOND 27 CYS B 360 CYS B 369 1555 1555 2.03 SSBOND 28 CYS B 392 CYS B 438 1555 1555 2.03 SSBOND 29 CYS B 437 CYS B 448 1555 1555 2.04 SSBOND 30 CYS B 461 CYS B 477 1555 1555 2.03 SSBOND 31 CYS B 476 CYS B 487 1555 1555 2.04 SSBOND 32 CYS B 514 CYS B 559 1555 1555 2.03 SSBOND 33 CYS B 558 CYS B 567 1555 1555 2.03 CRYST1 38.893 93.786 94.747 105.73 100.03 89.71 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025712 -0.000130 0.004692 0.00000 SCALE2 0.000000 0.010663 0.003043 0.00000 SCALE3 0.000000 0.000000 0.011146 0.00000