HEADER STRUCTURAL PROTEIN 10-APR-24 8Z10 TITLE HUMAN BETA-CATENIN CRYSTAL STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATENIN BETA-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-CATENIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTNNB1, CTNNB, OK/SW-CL.35, PRO2286; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-CATENIN, BCL9, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.TIM REVDAT 1 22-MAY-24 8Z10 0 JRNL AUTH F.TIM JRNL TITL CRYSTAL STRUCTURE OF BETA-CATENIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 24536 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1317 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1664 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.21 REMARK 3 BIN R VALUE (WORKING SET) : 0.2750 REMARK 3 BIN FREE R VALUE SET COUNT : 93 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3756 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : 1.95000 REMARK 3 B33 (A**2) : -1.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.329 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.197 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.277 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3808 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5186 ; 1.662 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 505 ; 5.717 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 142 ;40.452 ;24.296 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 622 ;16.863 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;21.184 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 646 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2791 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 8Z10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300046819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUL-16 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 4.2 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 4.2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26005 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: APO CRYSTALS OF BETA-CATENIN WERE REMARK 280 GROWN FROM 14% PEG3350, 0.1M HEPES PH 7.5, 0.2M L-PROLINE. REMARK 280 CRYSTAL WAS TRANSFERRED INTO A SOAKING SOLUTION AND INCUBATED AT REMARK 280 RT FOR 4 DAYS. CRYSTALS WERE TRANSFERRED INTO CRYOPROTECTANT (14% REMARK 280 PEG3350, 0.1M HEPES PH 7.5, 0.2M L-PROLINE, 20% GLYCEROL), AND REMARK 280 THEN FLASH FROZEN IN LIQUID NITROGEN., VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 92.94150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 92.94150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 31.97350 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.52700 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 31.97350 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.52700 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 92.94150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 31.97350 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.52700 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 92.94150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 31.97350 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.52700 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 138 REMARK 465 LEU A 139 REMARK 465 ILE A 140 REMARK 465 ASN A 141 REMARK 465 TYR A 142 REMARK 465 GLN A 143 REMARK 465 ASP A 144 REMARK 465 ASP A 145 REMARK 465 ALA A 146 REMARK 465 GLU A 147 REMARK 465 LEU A 148 REMARK 465 THR A 551 REMARK 465 SER A 552 REMARK 465 MET A 553 REMARK 465 GLY A 554 REMARK 465 GLY A 555 REMARK 465 THR A 556 REMARK 465 GLN A 557 REMARK 465 GLN A 558 REMARK 465 GLN A 559 REMARK 465 PHE A 560 REMARK 465 LYS A 666 REMARK 465 PRO A 667 REMARK 465 GLN A 668 REMARK 465 ASP A 669 REMARK 465 TYR A 670 REMARK 465 LYS A 671 REMARK 465 LYS A 672 REMARK 465 ARG A 673 REMARK 465 LEU A 674 REMARK 465 SER A 675 REMARK 465 VAL A 676 REMARK 465 GLU A 677 REMARK 465 LEU A 678 REMARK 465 THR A 679 REMARK 465 SER A 680 REMARK 465 SER A 681 REMARK 465 LEU A 682 REMARK 465 PHE A 683 REMARK 465 ARG A 684 REMARK 465 THR A 685 REMARK 465 GLU A 686 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 150 OG1 CG2 REMARK 470 ARG A 151 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 ASN A 161 CG OD1 ND2 REMARK 470 GLN A 165 CG CD OE1 NE2 REMARK 470 VAL A 166 CG1 CG2 REMARK 470 VAL A 168 CG1 CG2 REMARK 470 LYS A 170 CG CD CE NZ REMARK 470 VAL A 175 CG1 CG2 REMARK 470 LYS A 181 CG CD CE NZ REMARK 470 GLU A 182 CG CD OE1 OE2 REMARK 470 ARG A 185 CG CD NE CZ NH1 NH2 REMARK 470 HIS A 186 CG ND1 CD2 CE1 NE2 REMARK 470 ARG A 190 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 193 CG CD OE1 NE2 REMARK 470 MET A 194 CG SD CE REMARK 470 ARG A 200 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 203 CG CD OE1 NE2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 LYS A 335 CG CD CE NZ REMARK 470 GLU A 359 CG CD OE1 OE2 REMARK 470 LYS A 394 CG CD CE NZ REMARK 470 MET A 480 CG SD CE REMARK 470 ARG A 549 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 550 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 524 CG HIS A 524 CD2 0.056 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 535 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 ARG A 612 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 153 -73.01 -123.16 REMARK 500 GLU A 163 55.77 -110.96 REMARK 500 VAL A 173 27.07 -61.62 REMARK 500 MET A 174 -56.40 -128.86 REMARK 500 HIS A 186 -1.04 -55.79 REMARK 500 MET A 189 98.10 -66.74 REMARK 500 ARG A 190 -28.11 -165.37 REMARK 500 ASN A 206 -7.99 -142.72 REMARK 500 SER A 222 22.87 -75.88 REMARK 500 ARG A 225 4.51 -64.52 REMARK 500 ASP A 249 -59.74 -29.03 REMARK 500 LYS A 288 -179.45 -67.96 REMARK 500 ASN A 430 -42.68 71.68 REMARK 500 HIS A 488 31.03 -99.25 REMARK 500 ALA A 581 2.43 -64.11 REMARK 500 REMARK 500 REMARK: NULL DBREF 8Z10 A 138 686 UNP P35222 CTNB1_HUMAN 138 686 SEQRES 1 A 549 ASN LEU ILE ASN TYR GLN ASP ASP ALA GLU LEU ALA THR SEQRES 2 A 549 ARG ALA ILE PRO GLU LEU THR LYS LEU LEU ASN ASP GLU SEQRES 3 A 549 ASP GLN VAL VAL VAL ASN LYS ALA ALA VAL MET VAL HIS SEQRES 4 A 549 GLN LEU SER LYS LYS GLU ALA SER ARG HIS ALA ILE MET SEQRES 5 A 549 ARG SER PRO GLN MET VAL SER ALA ILE VAL ARG THR MET SEQRES 6 A 549 GLN ASN THR ASN ASP VAL GLU THR ALA ARG CYS THR ALA SEQRES 7 A 549 GLY THR LEU HIS ASN LEU SER HIS HIS ARG GLU GLY LEU SEQRES 8 A 549 LEU ALA ILE PHE LYS SER GLY GLY ILE PRO ALA LEU VAL SEQRES 9 A 549 LYS MET LEU GLY SER PRO VAL ASP SER VAL LEU PHE TYR SEQRES 10 A 549 ALA ILE THR THR LEU HIS ASN LEU LEU LEU HIS GLN GLU SEQRES 11 A 549 GLY ALA LYS MET ALA VAL ARG LEU ALA GLY GLY LEU GLN SEQRES 12 A 549 LYS MET VAL ALA LEU LEU ASN LYS THR ASN VAL LYS PHE SEQRES 13 A 549 LEU ALA ILE THR THR ASP CYS LEU GLN ILE LEU ALA TYR SEQRES 14 A 549 GLY ASN GLN GLU SER LYS LEU ILE ILE LEU ALA SER GLY SEQRES 15 A 549 GLY PRO GLN ALA LEU VAL ASN ILE MET ARG THR TYR THR SEQRES 16 A 549 TYR GLU LYS LEU LEU TRP THR THR SER ARG VAL LEU LYS SEQRES 17 A 549 VAL LEU SER VAL CYS SER SER ASN LYS PRO ALA ILE VAL SEQRES 18 A 549 GLU ALA GLY GLY MET GLN ALA LEU GLY LEU HIS LEU THR SEQRES 19 A 549 ASP PRO SER GLN ARG LEU VAL GLN ASN CYS LEU TRP THR SEQRES 20 A 549 LEU ARG ASN LEU SER ASP ALA ALA THR LYS GLN GLU GLY SEQRES 21 A 549 MET GLU GLY LEU LEU GLY THR LEU VAL GLN LEU LEU GLY SEQRES 22 A 549 SER ASP ASP ILE ASN VAL VAL THR CYS ALA ALA GLY ILE SEQRES 23 A 549 LEU SER ASN LEU THR CYS ASN ASN TYR LYS ASN LYS MET SEQRES 24 A 549 MET VAL CYS GLN VAL GLY GLY ILE GLU ALA LEU VAL ARG SEQRES 25 A 549 THR VAL LEU ARG ALA GLY ASP ARG GLU ASP ILE THR GLU SEQRES 26 A 549 PRO ALA ILE CYS ALA LEU ARG HIS LEU THR SER ARG HIS SEQRES 27 A 549 GLN GLU ALA GLU MET ALA GLN ASN ALA VAL ARG LEU HIS SEQRES 28 A 549 TYR GLY LEU PRO VAL VAL VAL LYS LEU LEU HIS PRO PRO SEQRES 29 A 549 SER HIS TRP PRO LEU ILE LYS ALA THR VAL GLY LEU ILE SEQRES 30 A 549 ARG ASN LEU ALA LEU CYS PRO ALA ASN HIS ALA PRO LEU SEQRES 31 A 549 ARG GLU GLN GLY ALA ILE PRO ARG LEU VAL GLN LEU LEU SEQRES 32 A 549 VAL ARG ALA HIS GLN ASP THR GLN ARG ARG THR SER MET SEQRES 33 A 549 GLY GLY THR GLN GLN GLN PHE VAL GLU GLY VAL ARG MET SEQRES 34 A 549 GLU GLU ILE VAL GLU GLY CYS THR GLY ALA LEU HIS ILE SEQRES 35 A 549 LEU ALA ARG ASP VAL HIS ASN ARG ILE VAL ILE ARG GLY SEQRES 36 A 549 LEU ASN THR ILE PRO LEU PHE VAL GLN LEU LEU TYR SER SEQRES 37 A 549 PRO ILE GLU ASN ILE GLN ARG VAL ALA ALA GLY VAL LEU SEQRES 38 A 549 CYS GLU LEU ALA GLN ASP LYS GLU ALA ALA GLU ALA ILE SEQRES 39 A 549 GLU ALA GLU GLY ALA THR ALA PRO LEU THR GLU LEU LEU SEQRES 40 A 549 HIS SER ARG ASN GLU GLY VAL ALA THR TYR ALA ALA ALA SEQRES 41 A 549 VAL LEU PHE ARG MET SER GLU ASP LYS PRO GLN ASP TYR SEQRES 42 A 549 LYS LYS ARG LEU SER VAL GLU LEU THR SER SER LEU PHE SEQRES 43 A 549 ARG THR GLU HET PRO A 701 8 HET PRO A 702 8 HETNAM PRO PROLINE FORMUL 2 PRO 2(C5 H9 N O2) HELIX 1 AA1 PRO A 154 ASN A 161 1 8 HELIX 2 AA2 ASP A 164 LYS A 180 1 17 HELIX 3 AA3 LYS A 181 MET A 189 1 9 HELIX 4 AA4 SER A 191 ASN A 204 1 14 HELIX 5 AA5 ASP A 207 SER A 222 1 16 HELIX 6 AA6 GLU A 226 GLY A 235 1 10 HELIX 7 AA7 GLY A 235 MET A 243 1 9 HELIX 8 AA8 LEU A 244 SER A 246 5 3 HELIX 9 AA9 VAL A 248 GLN A 266 1 19 HELIX 10 AB1 GLY A 268 GLY A 277 1 10 HELIX 11 AB2 GLY A 277 LEU A 285 1 9 HELIX 12 AB3 LEU A 286 LYS A 288 5 3 HELIX 13 AB4 ASN A 290 TYR A 306 1 17 HELIX 14 AB5 ASN A 308 SER A 318 1 11 HELIX 15 AB6 GLY A 319 TYR A 331 1 13 HELIX 16 AB7 TYR A 333 VAL A 349 1 17 HELIX 17 AB8 SER A 352 ALA A 360 1 9 HELIX 18 AB9 GLY A 361 LEU A 368 1 8 HELIX 19 AC1 SER A 374 ASP A 390 1 17 HELIX 20 AC2 MET A 398 LEU A 409 1 12 HELIX 21 AC3 ASP A 413 THR A 428 1 16 HELIX 22 AC4 ASN A 431 VAL A 441 1 11 HELIX 23 AC5 GLY A 442 GLY A 455 1 14 HELIX 24 AC6 ARG A 457 THR A 472 1 16 HELIX 25 AC7 GLU A 477 HIS A 488 1 12 HELIX 26 AC8 TYR A 489 LEU A 498 1 10 HELIX 27 AC9 HIS A 503 ALA A 518 1 16 HELIX 28 AD1 LEU A 519 ALA A 522 5 4 HELIX 29 AD2 ASN A 523 GLN A 530 1 8 HELIX 30 AD3 GLY A 531 ARG A 549 1 19 HELIX 31 AD4 ARG A 565 ALA A 581 1 17 HELIX 32 AD5 ASP A 583 LEU A 593 1 11 HELIX 33 AD6 THR A 595 LEU A 602 1 8 HELIX 34 AD7 LEU A 603 SER A 605 5 3 HELIX 35 AD8 ILE A 607 ALA A 622 1 16 HELIX 36 AD9 ASP A 624 GLU A 634 1 11 HELIX 37 AE1 ALA A 636 LEU A 644 1 9 HELIX 38 AE2 ASN A 648 SER A 663 1 16 CISPEP 1 PRO A 500 PRO A 501 0 10.70 CRYST1 63.947 103.054 185.883 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015638 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009704 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005380 0.00000