HEADER HYDROLASE 13-APR-24 8Z2Y TITLE HIGH-RESOLUTION CRYSTAL STRUCTURE OF EXO-BETA-(1,3)-GLUCANASE FROM TITLE 2 ASPERGILLUS ORYZAE (AOBGL) AS A COMPLEX WITH GLUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCAN 1,3-BETA-GLUCOSIDASE A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EXO-1,3-BETA-GLUCANASE 1,3-BETA-GLUCANASE A; COMPND 5 EC: 3.2.1.58; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; SOURCE 3 ORGANISM_TAXID: 5062; SOURCE 4 GENE: EXGA, EXG1, AO090003000990; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS CELLOBIOSE, GLUCOSE, EXOGLUCANASE, ASPERGILLUS ORYZAE, GH5, KEYWDS 2 LAMINARIN, LAMINARITRIOSE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.BANERJEE,C.K.KAMALE,A.B.SURYAWANSHI,P.BHAUMIK REVDAT 1 06-NOV-24 8Z2Y 0 JRNL AUTH B.BANERJEE,C.K.KAMALE,A.B.SURYAWANSHI,S.DASGUPTA,S.NORONHA, JRNL AUTH 2 P.BHAUMIK JRNL TITL CRYSTAL STRUCTURES OF ASPERGILLUS ORYZAE JRNL TITL 2 EXO-BETA-(1,3)-GLUCANASE REVEAL INSIGHTS INTO JRNL TITL 3 OLIGOSACCHARIDE BINDING, RECOGNITION, AND HYDROLYSIS. JRNL REF FEBS LETT. 2024 JRNL REFN ISSN 0014-5793 JRNL PMID 39448541 JRNL DOI 10.1002/1873-3468.15045 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0411 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.53 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 127482 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6709 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8481 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.3780 REMARK 3 BIN FREE R VALUE SET COUNT : 446 REMARK 3 BIN FREE R VALUE : 0.4000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2951 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 515 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.62000 REMARK 3 B22 (A**2) : -0.62000 REMARK 3 B33 (A**2) : 2.00000 REMARK 3 B12 (A**2) : -0.31000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.038 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.038 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.028 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.479 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.968 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3094 ; 0.012 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2760 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4206 ; 1.791 ; 1.635 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6372 ; 0.636 ; 1.575 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 387 ; 6.594 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 12 ; 6.135 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 464 ;12.080 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 438 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3657 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 723 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1536 ; 0.716 ; 0.871 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1536 ; 0.712 ; 0.871 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1921 ; 0.969 ; 1.569 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1922 ; 0.968 ; 1.571 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1558 ; 1.103 ; 1.043 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1559 ; 1.102 ; 1.043 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2284 ; 1.491 ; 1.826 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3984 ; 3.935 ;15.870 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3785 ; 2.578 ;11.310 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5854 ; 4.527 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8Z2Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-APR-24. REMARK 100 THE DEPOSITION ID IS D_1300046919. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : RRCAT INDUS-2 REMARK 200 BEAMLINE : PX-BL21 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97893 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 300 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 134619 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 10.17 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.40 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M SODIUM TARTRATE DIBASIC REMARK 280 DIHYDRATE, 20% W/V POLYETHYLENE GLYCOL 3350, PH 7.3, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.49333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.24667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 38.24667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 76.49333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LEU A 2 REMARK 465 PRO A 3 REMARK 465 LEU A 4 REMARK 465 LEU A 5 REMARK 465 LEU A 6 REMARK 465 CYS A 7 REMARK 465 ILE A 8 REMARK 465 VAL A 9 REMARK 465 PRO A 10 REMARK 465 TYR A 11 REMARK 465 CYS A 12 REMARK 465 TRP A 13 REMARK 465 SER A 14 REMARK 465 SER A 15 REMARK 465 ARG A 16 REMARK 465 LEU A 17 REMARK 465 ASP A 18 REMARK 465 PRO A 19 REMARK 465 ARG A 20 REMARK 465 ALA A 21 REMARK 465 SER A 22 REMARK 465 SER A 23 REMARK 465 HIS A 406 REMARK 465 HIS A 407 REMARK 465 HIS A 408 REMARK 465 HIS A 409 REMARK 465 HIS A 410 REMARK 465 HIS A 411 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 298 H1 BGC A 505 1.51 REMARK 500 H ILE A 163 O HOH A 607 1.55 REMARK 500 O HOH A 1101 O HOH A 1102 1.76 REMARK 500 O HOH A 1034 O HOH A 1045 1.94 REMARK 500 OD1 ASN A 223 O HOH A 601 1.96 REMARK 500 O HOH A 951 O HOH A 1072 2.04 REMARK 500 O HOH A 888 O HOH A 1065 2.04 REMARK 500 O HOH A 641 O HOH A 954 2.05 REMARK 500 O HOH A 962 O HOH A 1041 2.08 REMARK 500 O HOH A 733 O HOH A 984 2.09 REMARK 500 O HOH A 1101 O HOH A 1108 2.11 REMARK 500 O HOH A 649 O HOH A 971 2.11 REMARK 500 O HOH A 925 O HOH A 936 2.11 REMARK 500 O HOH A 1078 O HOH A 1083 2.13 REMARK 500 O HOH A 880 O HOH A 1016 2.13 REMARK 500 OE1 GLU A 298 C1 BGC A 505 2.13 REMARK 500 O HOH A 760 O HOH A 1028 2.14 REMARK 500 O HOH A 823 O HOH A 1005 2.14 REMARK 500 O HOH A 604 O HOH A 702 2.16 REMARK 500 N PHE A 24 O HOH A 602 2.16 REMARK 500 O HOH A 636 O HOH A 1038 2.16 REMARK 500 OE1 GLU A 298 O1 BGC A 505 2.19 REMARK 500 O HOH A 793 O HOH A 888 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 603 O HOH A 730 5665 1.45 REMARK 500 O HOH A 839 O HOH A 1085 5565 1.85 REMARK 500 O HOH A 933 O HOH A 1065 3455 1.89 REMARK 500 O GLY A 161 O HOH A 740 2564 1.96 REMARK 500 O GLY A 161 O HOH A 740 2564 1.97 REMARK 500 O1 EDO A 501 O HOH A 1048 2564 2.04 REMARK 500 O HOH A 1087 O HOH A 1097 3455 2.13 REMARK 500 NH1 ARG A 92 O HOH A 881 5665 2.17 REMARK 500 O HOH A 692 O HOH A 1103 3455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 92 NE - CZ - NH1 ANGL. DEV. = -5.6 DEGREES REMARK 500 ARG A 92 NE - CZ - NH2 ANGL. DEV. = 5.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 39 -71.48 -86.39 REMARK 500 SER A 150 118.41 76.37 REMARK 500 ASN A 152 -11.47 -148.96 REMARK 500 GLN A 166 -7.93 89.36 REMARK 500 ASN A 226 98.52 -161.49 REMARK 500 GLU A 249 31.45 -150.55 REMARK 500 LYS A 365 -106.39 -104.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1102 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A1103 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A1104 DISTANCE = 6.15 ANGSTROMS REMARK 525 HOH A1105 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH A1106 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A1107 DISTANCE = 6.68 ANGSTROMS REMARK 525 HOH A1108 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH A1109 DISTANCE = 7.55 ANGSTROMS REMARK 525 HOH A1110 DISTANCE = 7.90 ANGSTROMS REMARK 525 HOH A1111 DISTANCE = 8.17 ANGSTROMS REMARK 525 HOH A1112 DISTANCE = 8.19 ANGSTROMS REMARK 525 HOH A1113 DISTANCE = 8.86 ANGSTROMS REMARK 525 HOH A1114 DISTANCE = 10.10 ANGSTROMS REMARK 525 HOH A1115 DISTANCE = 12.05 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 507 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 306 O REMARK 620 2 HOH A1014 O 104.3 REMARK 620 3 HOH A1054 O 112.5 111.2 REMARK 620 N 1 2 DBREF 8Z2Y A 1 405 UNP Q7Z9L3 EXGA_ASPOR 1 405 SEQADV 8Z2Y HIS A 406 UNP Q7Z9L3 EXPRESSION TAG SEQADV 8Z2Y HIS A 407 UNP Q7Z9L3 EXPRESSION TAG SEQADV 8Z2Y HIS A 408 UNP Q7Z9L3 EXPRESSION TAG SEQADV 8Z2Y HIS A 409 UNP Q7Z9L3 EXPRESSION TAG SEQADV 8Z2Y HIS A 410 UNP Q7Z9L3 EXPRESSION TAG SEQADV 8Z2Y HIS A 411 UNP Q7Z9L3 EXPRESSION TAG SEQRES 1 A 411 MET LEU PRO LEU LEU LEU CYS ILE VAL PRO TYR CYS TRP SEQRES 2 A 411 SER SER ARG LEU ASP PRO ARG ALA SER SER PHE ASP TYR SEQRES 3 A 411 ASN GLY GLU LYS VAL ARG GLY VAL ASN LEU GLY GLY TRP SEQRES 4 A 411 LEU VAL LEU GLU PRO TRP ILE THR PRO SER ILE PHE ASP SEQRES 5 A 411 ALA ALA GLY ALA GLU ALA VAL ASP GLU TRP SER LEU THR SEQRES 6 A 411 LYS ILE LEU GLY LYS GLU GLU ALA GLU ALA ARG LEU SER SEQRES 7 A 411 ALA HIS TRP LYS SER PHE VAL SER ALA GLY ASP PHE GLN SEQRES 8 A 411 ARG MET ALA ASP ALA GLY LEU ASN HIS VAL ARG ILE PRO SEQRES 9 A 411 ILE GLY TYR TRP ALA LEU GLY PRO LEU GLU GLY ASP PRO SEQRES 10 A 411 TYR VAL ASP GLY GLN LEU GLU TYR LEU ASP LYS ALA VAL SEQRES 11 A 411 GLU TRP ALA GLY ALA ALA GLY LEU LYS VAL LEU ILE ASP SEQRES 12 A 411 LEU HIS GLY ALA PRO GLY SER GLN ASN GLY PHE ASP ASN SEQRES 13 A 411 SER GLY ARG ARG GLY ALA ILE GLN TRP GLN GLN GLY ASP SEQRES 14 A 411 THR VAL GLU GLN THR LEU ASP ALA PHE ASP LEU LEU ALA SEQRES 15 A 411 GLU ARG TYR LEU GLY SER ASP THR VAL ALA ALA ILE GLU SEQRES 16 A 411 ALA ILE ASN GLU PRO ASN ILE PRO GLY GLY VAL ASP GLN SEQRES 17 A 411 GLY LYS LEU GLN GLU TYR TYR GLY SER VAL TYR GLY ILE SEQRES 18 A 411 VAL ASN LYS TYR ASN ALA GLY THR SER VAL VAL TYR GLY SEQRES 19 A 411 ASP GLY PHE LEU PRO VAL GLU SER TRP ASN GLY PHE LYS SEQRES 20 A 411 THR GLU GLY SER LYS VAL VAL MET ASP THR HIS HIS TYR SEQRES 21 A 411 HIS MET PHE ASP ASN GLY LEU ILE ALA MET ASP ILE ASP SEQRES 22 A 411 SER HIS ILE ASP ALA VAL CYS GLN PHE ALA HIS GLN HIS SEQRES 23 A 411 LEU GLU ALA SER ASP LYS PRO VAL ILE VAL GLY GLU TRP SEQRES 24 A 411 THR GLY ALA VAL THR ASP CYS ALA LYS TYR LEU ASN GLY SEQRES 25 A 411 LYS GLY ASN GLY ALA ARG TYR ASP GLY SER TYR ALA ALA SEQRES 26 A 411 ASP LYS ALA ILE GLY ASP CYS SER SER LEU ALA THR GLY SEQRES 27 A 411 PHE VAL SER LYS LEU SER ASP GLU GLU ARG SER ASP MET SEQRES 28 A 411 ARG ARG PHE ILE GLU ALA GLN LEU ASP ALA PHE GLU LEU SEQRES 29 A 411 LYS SER GLY TRP VAL PHE TRP THR TRP LYS THR GLU GLY SEQRES 30 A 411 ALA PRO GLY TRP ASP MET SER ASP LEU LEU GLU ALA GLY SEQRES 31 A 411 VAL PHE PRO THR SER PRO ASP ASP ARG GLU PHE PRO LYS SEQRES 32 A 411 GLN CYS HIS HIS HIS HIS HIS HIS HET EDO A 501 10 HET GOL A 502 14 HET BGC A 503 24 HET GOL A 504 14 HET BGC A 505 24 HET CL A 506 1 HET NA A 507 1 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE FORMUL 2 EDO C2 H6 O2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 BGC 2(C6 H12 O6) FORMUL 7 CL CL 1- FORMUL 8 NA NA 1+ FORMUL 9 HOH *515(H2 O) HELIX 1 AA1 THR A 47 ALA A 53 1 7 HELIX 2 AA2 ASP A 60 GLY A 69 1 10 HELIX 3 AA3 GLY A 69 VAL A 85 1 17 HELIX 4 AA4 SER A 86 ALA A 96 1 11 HELIX 5 AA5 TRP A 108 GLY A 111 5 4 HELIX 6 AA6 GLY A 121 GLY A 137 1 17 HELIX 7 AA7 PHE A 154 GLY A 158 5 5 HELIX 8 AA8 ASP A 169 LEU A 186 1 18 HELIX 9 AA9 ASP A 207 ASN A 226 1 20 HELIX 10 AB1 PRO A 239 ASN A 244 5 6 HELIX 11 AB2 GLU A 249 SER A 251 5 3 HELIX 12 AB3 ASP A 264 ALA A 269 1 6 HELIX 13 AB4 ASP A 271 HIS A 286 1 16 HELIX 14 AB5 LEU A 287 SER A 290 5 4 HELIX 15 AB6 PHE A 339 LEU A 343 5 5 HELIX 16 AB7 SER A 344 GLU A 363 1 20 HELIX 17 AB8 ASP A 382 ALA A 389 1 8 SHEET 1 AA1 9 VAL A 31 ASN A 35 0 SHEET 2 AA1 9 HIS A 100 GLY A 106 1 O ARG A 102 N VAL A 34 SHEET 3 AA1 9 LYS A 139 GLY A 146 1 O HIS A 145 N ILE A 105 SHEET 4 AA1 9 VAL A 191 GLU A 195 1 O GLU A 195 N ILE A 142 SHEET 5 AA1 9 SER A 230 GLY A 234 1 O VAL A 232 N ILE A 194 SHEET 6 AA1 9 VAL A 253 HIS A 258 1 O VAL A 254 N VAL A 231 SHEET 7 AA1 9 VAL A 294 GLU A 298 1 O ILE A 295 N MET A 255 SHEET 8 AA1 9 GLY A 367 PHE A 370 1 O VAL A 369 N VAL A 296 SHEET 9 AA1 9 VAL A 31 ASN A 35 1 N ASN A 35 O PHE A 370 SSBOND 1 CYS A 280 CYS A 405 1555 1555 2.00 SSBOND 2 CYS A 306 CYS A 332 1555 1555 2.09 LINK O CYS A 306 NA NA A 507 1555 1555 2.71 LINK NA NA A 507 O HOH A1014 1555 1555 2.85 LINK NA NA A 507 O HOH A1054 1555 1555 3.03 CISPEP 1 TRP A 371 THR A 372 0 11.22 CRYST1 81.290 81.290 114.740 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012302 0.007102 0.000000 0.00000 SCALE2 0.000000 0.014205 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008715 0.00000