HEADER VIRAL PROTEIN 10-MAY-24 8ZH6 TITLE YEAST-EXPRESSED POLIO TYPE 2 EXPANDED VIRUS-LIKE PARTICLES COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: A; COMPND 4 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: VP3; COMPND 8 CHAIN: C; COMPND 9 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: VP2; COMPND 13 CHAIN: B; COMPND 14 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POLIOVIRUS 2; SOURCE 3 ORGANISM_TAXID: 12083; SOURCE 4 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: POLIOVIRUS 2; SOURCE 8 ORGANISM_TAXID: 12083; SOURCE 9 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: POLIOVIRUS 2; SOURCE 13 ORGANISM_TAXID: 12083; SOURCE 14 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 4922 KEYWDS POLIOVIRUS TYPE 2, VIRUS-LIKE PARTICLES, COMPACT STATE, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR Q.HONG,Y.CONG REVDAT 3 23-JUL-25 8ZH6 1 REMARK REVDAT 2 25-DEC-24 8ZH6 1 JRNL REVDAT 1 18-SEP-24 8ZH6 0 JRNL AUTH Q.HONG,S.WANG,X.WANG,W.HAN,T.CHEN,Y.LIU,F.CHENG,S.QIN, JRNL AUTH 2 S.ZHAO,Q.LIU,Y.CONG,Z.HUANG JRNL TITL VACCINE POTENCY AND STRUCTURE OF YEAST-PRODUCED POLIO TYPE 2 JRNL TITL 2 STABILIZED VIRUS-LIKE PARTICLES. JRNL REF VACCINES (BASEL) V. 12 2024 JRNL REFN ESSN 2076-393X JRNL PMID 39340107 JRNL DOI 10.3390/VACCINES12091077 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.100 REMARK 3 NUMBER OF PARTICLES : 107781 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8ZH6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBC ON 14-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1300047102. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT; POINT; POINT; POINT; REMARK 245 POINT; POINT; POINT; POINT REMARK 245 NAME OF SAMPLE : POLIOVIRUS 2 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : YEAST-EXPRESSED POLIO TYPE 2 REMARK 245 EXPANDED VIRUS-LIKE PARTICLES REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809017 0.500000 -0.309017 0.00005 REMARK 350 BIOMT2 2 -0.500000 0.309017 -0.809017 533.38404 REMARK 350 BIOMT3 2 -0.309017 0.809017 0.500000 -0.00012 REMARK 350 BIOMT1 3 0.500000 0.309017 -0.809017 266.69206 REMARK 350 BIOMT2 3 -0.309017 -0.809017 -0.500000 698.20884 REMARK 350 BIOMT3 3 -0.809017 0.500000 -0.309017 431.51662 REMARK 350 BIOMT1 4 0.500000 -0.309017 -0.809017 431.51675 REMARK 350 BIOMT2 4 0.309017 -0.809017 0.500000 266.69213 REMARK 350 BIOMT3 4 -0.809017 -0.500000 -0.309017 698.20874 REMARK 350 BIOMT1 5 0.809017 -0.500000 -0.309017 266.69199 REMARK 350 BIOMT2 5 0.500000 0.309017 0.809017 -164.82467 REMARK 350 BIOMT3 5 -0.309017 -0.809017 0.500000 431.51680 REMARK 350 BIOMT1 6 0.309017 0.809017 -0.500000 101.86719 REMARK 350 BIOMT2 6 0.809017 -0.500000 -0.309017 266.69219 REMARK 350 BIOMT3 6 -0.500000 -0.309017 -0.809017 698.20872 REMARK 350 BIOMT1 7 0.000000 0.000000 -1.000000 533.38393 REMARK 350 BIOMT2 7 1.000000 0.000000 0.000000 0.00006 REMARK 350 BIOMT3 7 0.000000 -1.000000 0.000000 533.38412 REMARK 350 BIOMT1 8 0.309017 -0.809017 -0.500000 533.38404 REMARK 350 BIOMT2 8 0.809017 0.500000 -0.309017 -0.00002 REMARK 350 BIOMT3 8 0.500000 -0.309017 0.809017 0.00008 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 101.86738 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 266.69206 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 -164.82479 REMARK 350 BIOMT1 10 0.809017 0.500000 0.309017 -164.82471 REMARK 350 BIOMT2 10 0.500000 -0.309017 -0.809017 431.51691 REMARK 350 BIOMT3 10 -0.309017 0.809017 -0.500000 266.69188 REMARK 350 BIOMT1 11 -0.809017 -0.500000 -0.309017 698.20869 REMARK 350 BIOMT2 11 -0.500000 0.309017 0.809017 101.86719 REMARK 350 BIOMT3 11 -0.309017 0.809017 -0.500000 266.69194 REMARK 350 BIOMT1 12 -0.309017 -0.809017 0.500000 431.51676 REMARK 350 BIOMT2 12 -0.809017 0.500000 0.309017 266.69196 REMARK 350 BIOMT3 12 -0.500000 -0.309017 -0.809017 698.20874 REMARK 350 BIOMT1 13 0.000000 0.000000 1.000000 0.00003 REMARK 350 BIOMT2 13 -1.000000 0.000000 0.000000 533.38407 REMARK 350 BIOMT3 13 0.000000 -1.000000 0.000000 533.38407 REMARK 350 BIOMT1 14 -0.309017 0.809017 0.500000 -0.00003 REMARK 350 BIOMT2 14 -0.809017 -0.500000 0.309017 533.38410 REMARK 350 BIOMT3 14 0.500000 -0.309017 0.809017 0.00002 REMARK 350 BIOMT1 15 -0.809017 0.500000 -0.309017 431.51665 REMARK 350 BIOMT2 15 -0.500000 -0.309017 0.809017 266.69201 REMARK 350 BIOMT3 15 0.309017 0.809017 0.500000 -164.82477 REMARK 350 BIOMT1 16 -0.500000 -0.309017 0.809017 266.69209 REMARK 350 BIOMT2 16 -0.309017 -0.809017 -0.500000 698.20883 REMARK 350 BIOMT3 16 0.809017 -0.500000 0.309017 101.86734 REMARK 350 BIOMT1 17 -0.500000 0.309017 0.809017 101.86724 REMARK 350 BIOMT2 17 0.309017 -0.809017 0.500000 266.69215 REMARK 350 BIOMT3 17 0.809017 0.500000 0.309017 -164.82474 REMARK 350 BIOMT1 18 -0.809017 0.500000 0.309017 266.69184 REMARK 350 BIOMT2 18 0.500000 0.309017 0.809017 -164.82468 REMARK 350 BIOMT3 18 0.309017 0.809017 -0.500000 101.86724 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 533.38389 REMARK 350 BIOMT2 19 0.000000 1.000000 0.000000 -0.00008 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 533.38403 REMARK 350 BIOMT1 20 -0.809017 -0.500000 0.309017 533.38404 REMARK 350 BIOMT2 20 -0.500000 0.309017 -0.809017 533.38396 REMARK 350 BIOMT3 20 0.309017 -0.809017 -0.500000 533.38409 REMARK 350 BIOMT1 21 0.809017 -0.500000 -0.309017 266.69217 REMARK 350 BIOMT2 21 -0.500000 -0.309017 -0.809017 698.20877 REMARK 350 BIOMT3 21 0.309017 0.809017 -0.500000 101.86720 REMARK 350 BIOMT1 22 1.000000 0.000000 0.000000 0.00008 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 533.38421 REMARK 350 BIOMT3 22 0.000000 0.000000 -1.000000 533.38398 REMARK 350 BIOMT1 23 0.809017 0.500000 -0.309017 -0.00008 REMARK 350 BIOMT2 23 0.500000 -0.309017 0.809017 0.00017 REMARK 350 BIOMT3 23 0.309017 -0.809017 -0.500000 533.38409 REMARK 350 BIOMT1 24 0.500000 0.309017 -0.809017 266.69191 REMARK 350 BIOMT2 24 0.309017 0.809017 0.500000 -164.82474 REMARK 350 BIOMT3 24 0.809017 -0.500000 0.309017 101.86738 REMARK 350 BIOMT1 25 0.500000 -0.309017 -0.809017 431.51679 REMARK 350 BIOMT2 25 -0.309017 0.809017 -0.500000 266.69191 REMARK 350 BIOMT3 25 0.809017 0.500000 0.309017 -164.82472 REMARK 350 BIOMT1 26 0.000000 1.000000 0.000000 -0.00014 REMARK 350 BIOMT2 26 0.000000 0.000000 1.000000 0.00009 REMARK 350 BIOMT3 26 1.000000 0.000000 0.000000 0.00005 REMARK 350 BIOMT1 27 -0.500000 0.309017 -0.809017 533.38390 REMARK 350 BIOMT2 27 -0.309017 0.809017 0.500000 -0.00010 REMARK 350 BIOMT3 27 0.809017 0.500000 -0.309017 0.00002 REMARK 350 BIOMT1 28 -0.309017 -0.809017 -0.500000 698.20881 REMARK 350 BIOMT2 28 -0.809017 0.500000 -0.309017 431.51660 REMARK 350 BIOMT3 28 0.500000 0.309017 -0.809017 266.69201 REMARK 350 BIOMT1 29 0.309017 -0.809017 0.500000 266.69216 REMARK 350 BIOMT2 29 -0.809017 -0.500000 -0.309017 698.20879 REMARK 350 BIOMT3 29 0.500000 -0.309017 -0.809017 431.51675 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 -164.82470 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 431.51692 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 266.69206 REMARK 350 BIOMT1 31 -0.309017 -0.809017 -0.500000 698.20874 REMARK 350 BIOMT2 31 0.809017 -0.500000 0.309017 101.86733 REMARK 350 BIOMT3 31 -0.500000 -0.309017 0.809017 266.69204 REMARK 350 BIOMT1 32 0.309017 -0.809017 0.500000 266.69201 REMARK 350 BIOMT2 32 0.809017 0.500000 0.309017 -164.82469 REMARK 350 BIOMT3 32 -0.500000 0.309017 0.809017 101.86725 REMARK 350 BIOMT1 33 0.500000 0.309017 0.809017 -164.82476 REMARK 350 BIOMT2 33 0.309017 0.809017 -0.500000 101.86736 REMARK 350 BIOMT3 33 -0.809017 0.500000 0.309017 266.69191 REMARK 350 BIOMT1 34 0.000000 1.000000 0.000000 -0.00006 REMARK 350 BIOMT2 34 0.000000 0.000000 -1.000000 533.38412 REMARK 350 BIOMT3 34 -1.000000 0.000000 0.000000 533.38393 REMARK 350 BIOMT1 35 -0.500000 0.309017 -0.809017 533.38398 REMARK 350 BIOMT2 35 0.309017 -0.809017 -0.500000 533.38410 REMARK 350 BIOMT3 35 -0.809017 -0.500000 0.309017 533.38401 REMARK 350 BIOMT1 36 -0.500000 0.309017 0.809017 101.86720 REMARK 350 BIOMT2 36 -0.309017 0.809017 -0.500000 266.69202 REMARK 350 BIOMT3 36 -0.809017 -0.500000 -0.309017 698.20872 REMARK 350 BIOMT1 37 -0.809017 0.500000 0.309017 266.69199 REMARK 350 BIOMT2 37 -0.500000 -0.309017 -0.809017 698.20879 REMARK 350 BIOMT3 37 -0.309017 -0.809017 0.500000 431.51676 REMARK 350 BIOMT1 38 -1.000000 0.000000 0.000000 533.38401 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000000 533.38408 REMARK 350 BIOMT3 38 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 39 -0.809017 -0.500000 0.309017 533.38396 REMARK 350 BIOMT2 39 0.500000 -0.309017 0.809017 0.00004 REMARK 350 BIOMT3 39 -0.309017 0.809017 0.500000 -0.00006 REMARK 350 BIOMT1 40 -0.500000 -0.309017 0.809017 266.69191 REMARK 350 BIOMT2 40 0.309017 0.809017 0.500000 -164.82472 REMARK 350 BIOMT3 40 -0.809017 0.500000 -0.309017 431.51666 REMARK 350 BIOMT1 41 0.809017 -0.500000 0.309017 101.86734 REMARK 350 BIOMT2 41 -0.500000 -0.309017 0.809017 266.69211 REMARK 350 BIOMT3 41 -0.309017 -0.809017 -0.500000 698.20878 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 -164.82477 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 101.86736 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 266.69208 REMARK 350 BIOMT1 43 0.309017 0.809017 -0.500000 101.86723 REMARK 350 BIOMT2 43 -0.809017 0.500000 0.309017 266.69198 REMARK 350 BIOMT3 43 0.500000 0.309017 0.809017 -164.82474 REMARK 350 BIOMT1 44 0.000000 0.000000 -1.000000 533.38406 REMARK 350 BIOMT2 44 -1.000000 0.000000 0.000000 533.38394 REMARK 350 BIOMT3 44 0.000000 1.000000 0.000000 -0.00009 REMARK 350 BIOMT1 45 0.309017 -0.809017 -0.500000 533.38412 REMARK 350 BIOMT2 45 -0.809017 -0.500000 0.309017 533.38402 REMARK 350 BIOMT3 45 -0.500000 0.309017 -0.809017 533.38395 REMARK 350 BIOMT1 46 -0.309017 0.809017 -0.500000 266.69200 REMARK 350 BIOMT2 46 -0.809017 -0.500000 -0.309017 698.20878 REMARK 350 BIOMT3 46 -0.500000 0.309017 0.809017 101.86721 REMARK 350 BIOMT1 47 -0.500000 -0.309017 -0.809017 698.20875 REMARK 350 BIOMT2 47 -0.309017 -0.809017 0.500000 431.51675 REMARK 350 BIOMT3 47 -0.809017 0.500000 0.309017 266.69193 REMARK 350 BIOMT1 48 0.000000 -1.000000 0.000000 533.38402 REMARK 350 BIOMT2 48 0.000000 0.000000 1.000000 0.00001 REMARK 350 BIOMT3 48 -1.000000 0.000000 0.000000 533.38398 REMARK 350 BIOMT1 49 0.500000 -0.309017 0.809017 -0.00002 REMARK 350 BIOMT2 49 -0.309017 0.809017 0.500000 0.00003 REMARK 350 BIOMT3 49 -0.809017 -0.500000 0.309017 533.38401 REMARK 350 BIOMT1 50 0.309017 0.809017 0.500000 -164.82476 REMARK 350 BIOMT2 50 -0.809017 0.500000 -0.309017 431.51678 REMARK 350 BIOMT3 50 -0.500000 -0.309017 0.809017 266.69198 REMARK 350 BIOMT1 51 -0.500000 -0.309017 -0.809017 698.20869 REMARK 350 BIOMT2 51 0.309017 0.809017 -0.500000 101.86719 REMARK 350 BIOMT3 51 0.809017 -0.500000 -0.309017 266.69211 REMARK 350 BIOMT1 52 0.000000 -1.000000 0.000000 533.38415 REMARK 350 BIOMT2 52 0.000000 0.000000 -1.000000 533.38399 REMARK 350 BIOMT3 52 1.000000 0.000000 0.000000 0.00005 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00011 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 533.38418 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 -0.00004 REMARK 350 BIOMT1 54 0.309017 0.809017 0.500000 -164.82482 REMARK 350 BIOMT2 54 0.809017 -0.500000 0.309017 101.86750 REMARK 350 BIOMT3 54 0.500000 0.309017 -0.809017 266.69198 REMARK 350 BIOMT1 55 -0.309017 0.809017 -0.500000 266.69182 REMARK 350 BIOMT2 55 0.809017 0.500000 0.309017 -164.82467 REMARK 350 BIOMT3 55 0.500000 -0.309017 -0.809017 431.51680 REMARK 350 BIOMT1 56 0.000000 0.000000 1.000000 -0.00005 REMARK 350 BIOMT2 56 1.000000 0.000000 0.000000 0.00014 REMARK 350 BIOMT3 56 0.000000 1.000000 0.000000 -0.00009 REMARK 350 BIOMT1 57 -0.309017 0.809017 0.500000 -0.00016 REMARK 350 BIOMT2 57 0.809017 0.500000 -0.309017 0.00011 REMARK 350 BIOMT3 57 -0.500000 0.309017 -0.809017 533.38395 REMARK 350 BIOMT1 58 -0.809017 0.500000 -0.309017 431.51661 REMARK 350 BIOMT2 58 0.500000 0.309017 -0.809017 266.69203 REMARK 350 BIOMT3 58 -0.309017 -0.809017 -0.500000 698.20879 REMARK 350 BIOMT1 59 -0.809017 -0.500000 -0.309017 698.20876 REMARK 350 BIOMT2 59 0.500000 -0.309017 -0.809017 431.51674 REMARK 350 BIOMT3 59 0.309017 -0.809017 0.500000 266.69210 REMARK 350 BIOMT1 60 -0.309017 -0.809017 0.500000 431.51679 REMARK 350 BIOMT2 60 0.809017 -0.500000 -0.309017 266.69208 REMARK 350 BIOMT3 60 0.500000 0.309017 0.809017 -164.82472 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 LEU A 2 REMARK 465 GLY A 3 REMARK 465 ASP A 4 REMARK 465 LEU A 5 REMARK 465 ILE A 6 REMARK 465 GLU A 7 REMARK 465 GLY A 8 REMARK 465 VAL A 9 REMARK 465 VAL A 10 REMARK 465 GLU A 11 REMARK 465 GLY A 12 REMARK 465 VAL A 13 REMARK 465 THR A 14 REMARK 465 ARG A 15 REMARK 465 ASN A 16 REMARK 465 ALA A 17 REMARK 465 LEU A 18 REMARK 465 THR A 19 REMARK 465 PRO A 20 REMARK 465 LEU A 21 REMARK 465 THR A 22 REMARK 465 PRO A 23 REMARK 465 ALA A 24 REMARK 465 ASN A 25 REMARK 465 ASN A 26 REMARK 465 LEU A 27 REMARK 465 PRO A 28 REMARK 465 ASP A 29 REMARK 465 THR A 30 REMARK 465 GLN A 31 REMARK 465 SER A 32 REMARK 465 SER A 33 REMARK 465 GLY A 34 REMARK 465 PRO A 35 REMARK 465 ALA A 36 REMARK 465 HIS A 37 REMARK 465 SER A 38 REMARK 465 LYS A 39 REMARK 465 GLU A 40 REMARK 465 THR A 41 REMARK 465 PRO A 42 REMARK 465 ALA A 43 REMARK 465 LEU A 44 REMARK 465 THR A 45 REMARK 465 ALA A 46 REMARK 465 VAL A 47 REMARK 465 GLU A 48 REMARK 465 THR A 49 REMARK 465 GLY A 50 REMARK 465 ALA A 51 REMARK 465 THR A 52 REMARK 465 ASN A 53 REMARK 465 PRO A 54 REMARK 465 LEU A 55 REMARK 465 VAL A 56 REMARK 465 PRO A 57 REMARK 465 SER A 58 REMARK 465 ASP A 59 REMARK 465 THR A 60 REMARK 465 VAL A 61 REMARK 465 GLN A 62 REMARK 465 THR A 63 REMARK 465 ARG A 64 REMARK 465 HIS A 65 REMARK 465 VAL A 66 REMARK 465 ILE A 67 REMARK 465 GLN A 68 REMARK 465 LYS A 69 REMARK 465 ALA A 213 REMARK 465 LYS A 214 REMARK 465 VAL A 215 REMARK 465 PRO A 216 REMARK 465 LEU A 217 REMARK 465 ALA A 218 REMARK 465 GLY A 219 REMARK 465 GLN A 220 REMARK 465 ALA A 221 REMARK 465 SER A 222 REMARK 465 THR A 223 REMARK 465 GLU A 224 REMARK 465 GLY A 225 REMARK 465 ASP A 226 REMARK 465 SER A 227 REMARK 465 LEU A 228 REMARK 465 TYR A 229 REMARK 465 GLY A 230 REMARK 465 ALA A 231 REMARK 465 ASP A 288 REMARK 465 GLY A 289 REMARK 465 LEU A 290 REMARK 465 ALA A 291 REMARK 465 PRO A 292 REMARK 465 LEU A 293 REMARK 465 PRO A 294 REMARK 465 GLU A 295 REMARK 465 LYS A 296 REMARK 465 GLY A 297 REMARK 465 LEU A 298 REMARK 465 THR A 299 REMARK 465 THR A 300 REMARK 465 TYR A 301 REMARK 465 GLY C 1 REMARK 465 LEU C 2 REMARK 465 PRO C 3 REMARK 465 VAL C 4 REMARK 465 ASN C 181 REMARK 465 ASP C 182 REMARK 465 SER C 183 REMARK 465 PHE C 184 REMARK 465 THR C 185 REMARK 465 GLU C 186 REMARK 465 MET C 236 REMARK 465 PRO C 237 REMARK 465 GLN C 238 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 ASN B 3 REMARK 465 ILE B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 ARG B 12 REMARK 465 VAL B 13 REMARK 465 MET B 14 REMARK 465 GLN B 15 REMARK 465 LEU B 16 REMARK 465 THR B 17 REMARK 465 LEU B 18 REMARK 465 GLY B 19 REMARK 465 ASN B 20 REMARK 465 SER B 21 REMARK 465 THR B 22 REMARK 465 ILE B 23 REMARK 465 THR B 24 REMARK 465 THR B 25 REMARK 465 GLN B 26 REMARK 465 GLU B 27 REMARK 465 ALA B 28 REMARK 465 ALA B 29 REMARK 465 ASN B 30 REMARK 465 SER B 31 REMARK 465 VAL B 32 REMARK 465 VAL B 33 REMARK 465 ALA B 34 REMARK 465 TYR B 35 REMARK 465 GLY B 36 REMARK 465 ARG B 37 REMARK 465 TRP B 38 REMARK 465 PRO B 39 REMARK 465 GLU B 40 REMARK 465 TYR B 41 REMARK 465 ILE B 42 REMARK 465 LYS B 43 REMARK 465 ASP B 44 REMARK 465 SER B 45 REMARK 465 GLU B 46 REMARK 465 ALA B 47 REMARK 465 ASN B 48 REMARK 465 PRO B 49 REMARK 465 VAL B 50 REMARK 465 ASP B 51 REMARK 465 GLN B 52 REMARK 465 PRO B 53 REMARK 465 THR B 54 REMARK 465 GLU B 55 REMARK 465 PRO B 56 REMARK 465 ASP B 57 REMARK 465 VAL B 58 REMARK 465 ALA B 59 REMARK 465 ALA B 60 REMARK 465 CYS B 61 REMARK 465 GLY B 134 REMARK 465 ASP B 135 REMARK 465 SER B 136 REMARK 465 THR B 137 REMARK 465 THR B 138 REMARK 465 HIS B 139 REMARK 465 MET B 140 REMARK 465 PHE B 141 REMARK 465 THR B 142 REMARK 465 LYS B 143 REMARK 465 TYR B 144 REMARK 465 GLU B 145 REMARK 465 ASN B 146 REMARK 465 ALA B 147 REMARK 465 PHE B 160 REMARK 465 THR B 161 REMARK 465 LEU B 162 REMARK 465 ASP B 163 REMARK 465 THR B 164 REMARK 465 ASN B 165 REMARK 465 ALA B 166 REMARK 465 THR B 167 REMARK 465 ASN B 168 REMARK 465 PRO B 169 REMARK 465 ALA B 170 REMARK 465 ARG B 171 REMARK 465 ASN B 172 REMARK 465 PHE B 173 REMARK 465 ASN B 264 REMARK 465 ILE B 265 REMARK 465 THR B 266 REMARK 465 VAL B 267 REMARK 465 PRO B 268 REMARK 465 ARG B 269 REMARK 465 THR B 270 REMARK 465 GLN B 271 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 71 -169.81 60.03 REMARK 500 ARG A 72 146.12 69.62 REMARK 500 GLU A 74 -8.00 72.10 REMARK 500 ASP A 95 -175.34 -170.89 REMARK 500 ALA A 96 71.26 57.08 REMARK 500 THR A 98 -73.56 62.32 REMARK 500 VAL A 107 131.28 65.77 REMARK 500 ASP A 236 -99.92 54.50 REMARK 500 PHE A 237 -3.77 68.64 REMARK 500 CYS A 270 73.34 57.56 REMARK 500 ALA C 16 31.11 -96.82 REMARK 500 LEU C 55 -95.83 27.37 REMARK 500 HIS C 77 -154.49 46.83 REMARK 500 ASP C 79 35.04 -98.87 REMARK 500 THR C 179 51.81 -91.60 REMARK 500 GLN C 195 -61.96 -98.65 REMARK 500 SER C 203 14.60 58.52 REMARK 500 ILE C 231 86.39 60.40 REMARK 500 PRO B 83 31.14 -85.94 REMARK 500 SER B 243 149.12 67.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-60095 RELATED DB: EMDB REMARK 900 YEAST-EXPRESSED POLIO TYPE 2 EXPANDED VIRUS-LIKE PARTICLES DBREF 8ZH6 A 1 301 UNP Q80I02 Q80I02_9ENTO 579 879 DBREF 8ZH6 C 1 238 UNP J3SGQ4 J3SGQ4_9ENTO 341 578 DBREF 8ZH6 B 1 271 UNP Q80I02 Q80I02_9ENTO 70 340 SEQADV 8ZH6 ASN C 59 UNP J3SGQ4 SER 399 CONFLICT SEQRES 1 A 301 GLY LEU GLY ASP LEU ILE GLU GLY VAL VAL GLU GLY VAL SEQRES 2 A 301 THR ARG ASN ALA LEU THR PRO LEU THR PRO ALA ASN ASN SEQRES 3 A 301 LEU PRO ASP THR GLN SER SER GLY PRO ALA HIS SER LYS SEQRES 4 A 301 GLU THR PRO ALA LEU THR ALA VAL GLU THR GLY ALA THR SEQRES 5 A 301 ASN PRO LEU VAL PRO SER ASP THR VAL GLN THR ARG HIS SEQRES 6 A 301 VAL ILE GLN LYS ARG THR ARG SER GLU SER THR VAL GLU SEQRES 7 A 301 SER PHE PHE ALA ARG GLY ALA CYS VAL ALA ILE ILE GLU SEQRES 8 A 301 VAL ASP ASN ASP ALA PRO THR LYS ARG ALA SER LYS LEU SEQRES 9 A 301 PHE SER VAL TRP LYS ILE THR TYR LYS ASP THR VAL GLN SEQRES 10 A 301 LEU ARG ARG LYS LEU GLU PHE PHE THR TYR SER ARG PHE SEQRES 11 A 301 ASP MET GLU PHE THR PHE VAL VAL THR SER ASN TYR THR SEQRES 12 A 301 ASP ALA ASN ASN GLY HIS ALA LEU ASN GLN VAL TYR GLN SEQRES 13 A 301 ILE MET TYR ILE PRO PRO GLY ALA PRO ILE PRO GLY LYS SEQRES 14 A 301 TRP ASN ASP TYR THR TRP GLN THR SER SER ASN PRO SER SEQRES 15 A 301 VAL PHE TYR THR TYR GLY ALA PRO PRO ALA ARG ILE SER SEQRES 16 A 301 VAL PRO TYR VAL GLY ILE ALA ASN ALA TYR SER HIS PHE SEQRES 17 A 301 TYR ASP GLY PHE ALA LYS VAL PRO LEU ALA GLY GLN ALA SEQRES 18 A 301 SER THR GLU GLY ASP SER LEU TYR GLY ALA ALA SER LEU SEQRES 19 A 301 ASN ASP PHE GLY SER LEU ALA VAL ARG VAL VAL ASN ASP SEQRES 20 A 301 HIS ASN PRO THR LYS LEU THR SER LYS ILE ARG VAL TYR SEQRES 21 A 301 MET LYS PRO LYS HIS VAL ARG VAL TRP CYS PRO ARG PRO SEQRES 22 A 301 PRO ARG ALA VAL PRO TYR TYR GLY PRO GLY VAL ASP TYR SEQRES 23 A 301 LYS ASP GLY LEU ALA PRO LEU PRO GLU LYS GLY LEU THR SEQRES 24 A 301 THR TYR SEQRES 1 C 238 GLY LEU PRO VAL LEU ASN THR PRO GLY SER ASN GLN TYR SEQRES 2 C 238 LEU THR ALA ASP ASN TYR GLN SER PRO CYS ALA ILE PRO SEQRES 3 C 238 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 4 C 238 VAL ARG ASN MET MET GLU LEU ALA GLU ILE ASP THR MET SEQRES 5 C 238 ILE PRO LEU ASN LEU THR ASN GLN ARG LYS ASN THR MET SEQRES 6 C 238 ASP MET TYR ARG VAL GLU LEU ASN ASP ALA ALA HIS SER SEQRES 7 C 238 ASP THR PRO ILE LEU CYS LEU SER LEU SER PRO ALA SER SEQRES 8 C 238 ASP PRO ARG LEU ALA HIS THR MET LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR THR HIS TRP ALA GLY SER LEU LYS PHE THR SEQRES 10 C 238 PHE LEU PHE CYS GLY SER MET MET ALA THR GLY LYS LEU SEQRES 11 C 238 LEU VAL SER TYR ALA PRO PRO GLY ALA GLU ALA PRO LYS SEQRES 12 C 238 SER ARG LYS GLU ALA MET LEU GLY THR HIS VAL ILE TRP SEQRES 13 C 238 ASP ILE GLY LEU GLN SER SER CYS THR MET VAL VAL PRO SEQRES 14 C 238 TRP ILE SER ASN THR THR TYR ARG GLN THR ILE ASN ASP SEQRES 15 C 238 SER PHE THR GLU GLY GLY TYR ILE SER MET PHE TYR GLN SEQRES 16 C 238 THR ARG VAL VAL VAL PRO LEU SER THR PRO ARG LYS MET SEQRES 17 C 238 ASP ILE LEU GLY PHE VAL SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG LEU LEU ARG ASP THR THR HIS ILE SER GLN GLU SEQRES 19 C 238 ALA MET PRO GLN SEQRES 1 B 271 SER PRO ASN ILE GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 271 MET GLN LEU THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 B 271 GLU ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO SEQRES 4 B 271 GLU TYR ILE LYS ASP SER GLU ALA ASN PRO VAL ASP GLN SEQRES 5 B 271 PRO THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR SEQRES 6 B 271 LEU ASP THR VAL THR TRP ARG LYS GLU SER ARG GLY TRP SEQRES 7 B 271 TRP TRP LYS LEU PRO ASP ALA LEU LYS ASP MET GLY LEU SEQRES 8 B 271 PHE GLY GLN ASN MET PHE TYR HIS TYR LEU GLY ARG ALA SEQRES 9 B 271 GLY TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 B 271 HIS GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET SEQRES 11 B 271 CYS LEU ALA GLY ASP SER THR THR HIS MET PHE THR LYS SEQRES 12 B 271 TYR GLU ASN ALA ASN PRO GLY GLU LYS GLY GLY GLU PHE SEQRES 13 B 271 LYS GLY SER PHE THR LEU ASP THR ASN ALA THR ASN PRO SEQRES 14 B 271 ALA ARG ASN PHE CYS PRO VAL ASP TYR LEU PHE GLY SER SEQRES 15 B 271 GLY VAL LEU ALA GLY ASN ALA PHE VAL TYR PRO HIS GLN SEQRES 16 B 271 ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU VAL SEQRES 17 B 271 LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET THR SEQRES 18 B 271 LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU ALA SEQRES 19 B 271 PRO LEU ASP PHE ALA THR GLU SER SER THR GLU ILE PRO SEQRES 20 B 271 ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE ASN SEQRES 21 B 271 GLY LEU ARG ASN ILE THR VAL PRO ARG THR GLN HELIX 1 1 VAL A 77 PHE A 81 1 5 HELIX 2 2 VAL A 116 GLU A 123 1 8 HELIX 3 3 TYR A 173 GLN A 176 1 4 HELIX 4 4 MET C 43 ALA C 47 1 5 HELIX 5 5 ASP C 66 TYR C 68 1 3 HELIX 6 6 PRO C 93 ALA C 96 1 4 HELIX 7 7 MET C 99 TYR C 106 1 8 HELIX 8 8 ARG C 145 LEU C 150 1 6 HELIX 9 9 ASP B 84 LEU B 86 1 3 HELIX 10 10 GLY B 90 TYR B 98 1 9 HELIX 11 11 ALA B 186 VAL B 191 1 6 SHEET 1 1 1 ALA A 85 ASP A 93 0 SHEET 1 2 1 TYR A 127 ARG A 129 0 SHEET 1 3 1 ASP A 131 TYR A 142 0 SHEET 1 4 1 VAL A 154 ILE A 160 0 SHEET 1 5 1 SER A 182 THR A 186 0 SHEET 1 6 1 ALA A 192 VAL A 196 0 SHEET 1 7 1 SER A 239 VAL A 244 0 SHEET 1 8 1 LEU A 253 LYS A 264 0 SHEET 1 9 1 ARG A 267 TRP A 269 0 SHEET 1 10 1 ARG C 69 GLU C 71 0 SHEET 1 11 1 LEU C 83 SER C 86 0 SHEET 1 12 1 HIS C 109 ALA C 111 0 SHEET 1 13 1 LEU C 114 PHE C 120 0 SHEET 1 14 1 GLY C 128 ALA C 135 0 SHEET 1 15 1 HIS C 153 ILE C 158 0 SHEET 1 16 1 SER C 163 VAL C 168 0 SHEET 1 17 1 TYR C 189 TYR C 194 0 SHEET 1 18 1 ASP C 209 ALA C 216 0 SHEET 1 19 1 SER C 221 ARG C 223 0 SHEET 1 20 1 VAL B 69 TRP B 71 0 SHEET 1 21 1 TRP B 78 LEU B 82 0 SHEET 1 22 1 LEU B 101 ARG B 103 0 SHEET 1 23 1 GLY B 105 CYS B 112 0 SHEET 1 24 1 ALA B 121 PRO B 128 0 SHEET 1 25 1 HIS B 194 ASN B 198 0 SHEET 1 26 1 CYS B 204 LEU B 209 0 SHEET 1 27 1 TRP B 226 ALA B 234 0 SHEET 1 28 1 ILE B 246 MET B 255 0 SHEET 1 29 1 GLU B 258 ASN B 260 0 CISPEP 1 LEU B 82 PRO B 83 0 -1.34 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 1612 LYS A 287 TER 3363 ALA C 235 TER 4726 ARG B 263 MASTER 533 0 0 11 29 0 0 6 4723 3 0 64 END