data_8ZXM # _entry.id 8ZXM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.403 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8ZXM pdb_00008zxm 10.2210/pdb8zxm/pdb WWPDB D_1300048615 ? ? EMDB EMD-60544 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-04-16 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8ZXM _pdbx_database_status.recvd_initial_deposition_date 2024-06-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of human GLUT9 bound to urate' _pdbx_database_related.db_id EMD-60544 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 4 _pdbx_contact_author.email t-2438@yokohama-cu.ac.jp _pdbx_contact_author.name_first Tomohiro _pdbx_contact_author.name_last Nishizawa _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7463-8398 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Matsushita, D.' 1 0009-0008-2024-2767 'Lee, Y.' 2 0000-0002-1507-805X 'Nishizawa, T.' 3 0000-0001-7463-8398 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Cell Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2211-1247 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 44 _citation.language ? _citation.page_first 115514 _citation.page_last 115514 _citation.title 'Structural basis of urate transport by glucose transporter 9.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.celrep.2025.115514 _citation.pdbx_database_id_PubMed 40186864 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Matsushita, D.' 1 ? primary 'Toyoda, Y.' 2 ? primary 'Lee, Y.' 3 ? primary 'Aoi, M.' 4 ? primary 'Matsuo, H.' 5 ? primary 'Takada, T.' 6 ? primary 'Nishizawa, T.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Solute carrier family 2, facilitated glucose transporter member 9' 59707.477 1 ? ? ? ? 2 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 3 non-polymer syn 'URIC ACID' 168.110 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Glucose transporter type 9,GLUT-9,Urate transporter' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MARKQNRNSKELGLVPLTDDTSHAGPPGPGRALLECDHLRSGVPGGRRRKDWSCSLLVASLAGAFGSSFLYGYNLSVVNA PTPYIKAFYNESWERRHGRPIDPDTLTLLWSVTVSIFAIGGLVGTLIVKMIGKVLGRKHTLLANNGFAISAALLMACSLQ AGAFEMLIVGRFIMGIDGGVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPELLGKESTWPYLFGVIVV PAVVQLLSLPFLPDSPRYLLLEKHNEARAVKAFQTFLGKADVSQEVEEVLAESRVQRSIRLVSVLELLRAPYVRWQVVTV IVTMACYQLCGLNAIWFYTNSIFGKAGIPPAKIPYVTLSTGGIETLAAVFSGLVIEHLGRRPLLIGGFGLMGLFFGTLTI TLTLQDHAPWVPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDTYC FLVFATICITGAIYLYFVLPETKNRTYAEISQAFSKRNKAYPPEEKIDSAVTDGKINGRPGTENLYFQ ; _entity_poly.pdbx_seq_one_letter_code_can ;MARKQNRNSKELGLVPLTDDTSHAGPPGPGRALLECDHLRSGVPGGRRRKDWSCSLLVASLAGAFGSSFLYGYNLSVVNA PTPYIKAFYNESWERRHGRPIDPDTLTLLWSVTVSIFAIGGLVGTLIVKMIGKVLGRKHTLLANNGFAISAALLMACSLQ AGAFEMLIVGRFIMGIDGGVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPELLGKESTWPYLFGVIVV PAVVQLLSLPFLPDSPRYLLLEKHNEARAVKAFQTFLGKADVSQEVEEVLAESRVQRSIRLVSVLELLRAPYVRWQVVTV IVTMACYQLCGLNAIWFYTNSIFGKAGIPPAKIPYVTLSTGGIETLAAVFSGLVIEHLGRRPLLIGGFGLMGLFFGTLTI TLTLQDHAPWVPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDTYC FLVFATICITGAIYLYFVLPETKNRTYAEISQAFSKRNKAYPPEEKIDSAVTDGKINGRPGTENLYFQ ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'URIC ACID' _pdbx_entity_nonpoly.comp_id URC # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 ARG n 1 4 LYS n 1 5 GLN n 1 6 ASN n 1 7 ARG n 1 8 ASN n 1 9 SER n 1 10 LYS n 1 11 GLU n 1 12 LEU n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 LEU n 1 18 THR n 1 19 ASP n 1 20 ASP n 1 21 THR n 1 22 SER n 1 23 HIS n 1 24 ALA n 1 25 GLY n 1 26 PRO n 1 27 PRO n 1 28 GLY n 1 29 PRO n 1 30 GLY n 1 31 ARG n 1 32 ALA n 1 33 LEU n 1 34 LEU n 1 35 GLU n 1 36 CYS n 1 37 ASP n 1 38 HIS n 1 39 LEU n 1 40 ARG n 1 41 SER n 1 42 GLY n 1 43 VAL n 1 44 PRO n 1 45 GLY n 1 46 GLY n 1 47 ARG n 1 48 ARG n 1 49 ARG n 1 50 LYS n 1 51 ASP n 1 52 TRP n 1 53 SER n 1 54 CYS n 1 55 SER n 1 56 LEU n 1 57 LEU n 1 58 VAL n 1 59 ALA n 1 60 SER n 1 61 LEU n 1 62 ALA n 1 63 GLY n 1 64 ALA n 1 65 PHE n 1 66 GLY n 1 67 SER n 1 68 SER n 1 69 PHE n 1 70 LEU n 1 71 TYR n 1 72 GLY n 1 73 TYR n 1 74 ASN n 1 75 LEU n 1 76 SER n 1 77 VAL n 1 78 VAL n 1 79 ASN n 1 80 ALA n 1 81 PRO n 1 82 THR n 1 83 PRO n 1 84 TYR n 1 85 ILE n 1 86 LYS n 1 87 ALA n 1 88 PHE n 1 89 TYR n 1 90 ASN n 1 91 GLU n 1 92 SER n 1 93 TRP n 1 94 GLU n 1 95 ARG n 1 96 ARG n 1 97 HIS n 1 98 GLY n 1 99 ARG n 1 100 PRO n 1 101 ILE n 1 102 ASP n 1 103 PRO n 1 104 ASP n 1 105 THR n 1 106 LEU n 1 107 THR n 1 108 LEU n 1 109 LEU n 1 110 TRP n 1 111 SER n 1 112 VAL n 1 113 THR n 1 114 VAL n 1 115 SER n 1 116 ILE n 1 117 PHE n 1 118 ALA n 1 119 ILE n 1 120 GLY n 1 121 GLY n 1 122 LEU n 1 123 VAL n 1 124 GLY n 1 125 THR n 1 126 LEU n 1 127 ILE n 1 128 VAL n 1 129 LYS n 1 130 MET n 1 131 ILE n 1 132 GLY n 1 133 LYS n 1 134 VAL n 1 135 LEU n 1 136 GLY n 1 137 ARG n 1 138 LYS n 1 139 HIS n 1 140 THR n 1 141 LEU n 1 142 LEU n 1 143 ALA n 1 144 ASN n 1 145 ASN n 1 146 GLY n 1 147 PHE n 1 148 ALA n 1 149 ILE n 1 150 SER n 1 151 ALA n 1 152 ALA n 1 153 LEU n 1 154 LEU n 1 155 MET n 1 156 ALA n 1 157 CYS n 1 158 SER n 1 159 LEU n 1 160 GLN n 1 161 ALA n 1 162 GLY n 1 163 ALA n 1 164 PHE n 1 165 GLU n 1 166 MET n 1 167 LEU n 1 168 ILE n 1 169 VAL n 1 170 GLY n 1 171 ARG n 1 172 PHE n 1 173 ILE n 1 174 MET n 1 175 GLY n 1 176 ILE n 1 177 ASP n 1 178 GLY n 1 179 GLY n 1 180 VAL n 1 181 ALA n 1 182 LEU n 1 183 SER n 1 184 VAL n 1 185 LEU n 1 186 PRO n 1 187 MET n 1 188 TYR n 1 189 LEU n 1 190 SER n 1 191 GLU n 1 192 ILE n 1 193 SER n 1 194 PRO n 1 195 LYS n 1 196 GLU n 1 197 ILE n 1 198 ARG n 1 199 GLY n 1 200 SER n 1 201 LEU n 1 202 GLY n 1 203 GLN n 1 204 VAL n 1 205 THR n 1 206 ALA n 1 207 ILE n 1 208 PHE n 1 209 ILE n 1 210 CYS n 1 211 ILE n 1 212 GLY n 1 213 VAL n 1 214 PHE n 1 215 THR n 1 216 GLY n 1 217 GLN n 1 218 LEU n 1 219 LEU n 1 220 GLY n 1 221 LEU n 1 222 PRO n 1 223 GLU n 1 224 LEU n 1 225 LEU n 1 226 GLY n 1 227 LYS n 1 228 GLU n 1 229 SER n 1 230 THR n 1 231 TRP n 1 232 PRO n 1 233 TYR n 1 234 LEU n 1 235 PHE n 1 236 GLY n 1 237 VAL n 1 238 ILE n 1 239 VAL n 1 240 VAL n 1 241 PRO n 1 242 ALA n 1 243 VAL n 1 244 VAL n 1 245 GLN n 1 246 LEU n 1 247 LEU n 1 248 SER n 1 249 LEU n 1 250 PRO n 1 251 PHE n 1 252 LEU n 1 253 PRO n 1 254 ASP n 1 255 SER n 1 256 PRO n 1 257 ARG n 1 258 TYR n 1 259 LEU n 1 260 LEU n 1 261 LEU n 1 262 GLU n 1 263 LYS n 1 264 HIS n 1 265 ASN n 1 266 GLU n 1 267 ALA n 1 268 ARG n 1 269 ALA n 1 270 VAL n 1 271 LYS n 1 272 ALA n 1 273 PHE n 1 274 GLN n 1 275 THR n 1 276 PHE n 1 277 LEU n 1 278 GLY n 1 279 LYS n 1 280 ALA n 1 281 ASP n 1 282 VAL n 1 283 SER n 1 284 GLN n 1 285 GLU n 1 286 VAL n 1 287 GLU n 1 288 GLU n 1 289 VAL n 1 290 LEU n 1 291 ALA n 1 292 GLU n 1 293 SER n 1 294 ARG n 1 295 VAL n 1 296 GLN n 1 297 ARG n 1 298 SER n 1 299 ILE n 1 300 ARG n 1 301 LEU n 1 302 VAL n 1 303 SER n 1 304 VAL n 1 305 LEU n 1 306 GLU n 1 307 LEU n 1 308 LEU n 1 309 ARG n 1 310 ALA n 1 311 PRO n 1 312 TYR n 1 313 VAL n 1 314 ARG n 1 315 TRP n 1 316 GLN n 1 317 VAL n 1 318 VAL n 1 319 THR n 1 320 VAL n 1 321 ILE n 1 322 VAL n 1 323 THR n 1 324 MET n 1 325 ALA n 1 326 CYS n 1 327 TYR n 1 328 GLN n 1 329 LEU n 1 330 CYS n 1 331 GLY n 1 332 LEU n 1 333 ASN n 1 334 ALA n 1 335 ILE n 1 336 TRP n 1 337 PHE n 1 338 TYR n 1 339 THR n 1 340 ASN n 1 341 SER n 1 342 ILE n 1 343 PHE n 1 344 GLY n 1 345 LYS n 1 346 ALA n 1 347 GLY n 1 348 ILE n 1 349 PRO n 1 350 PRO n 1 351 ALA n 1 352 LYS n 1 353 ILE n 1 354 PRO n 1 355 TYR n 1 356 VAL n 1 357 THR n 1 358 LEU n 1 359 SER n 1 360 THR n 1 361 GLY n 1 362 GLY n 1 363 ILE n 1 364 GLU n 1 365 THR n 1 366 LEU n 1 367 ALA n 1 368 ALA n 1 369 VAL n 1 370 PHE n 1 371 SER n 1 372 GLY n 1 373 LEU n 1 374 VAL n 1 375 ILE n 1 376 GLU n 1 377 HIS n 1 378 LEU n 1 379 GLY n 1 380 ARG n 1 381 ARG n 1 382 PRO n 1 383 LEU n 1 384 LEU n 1 385 ILE n 1 386 GLY n 1 387 GLY n 1 388 PHE n 1 389 GLY n 1 390 LEU n 1 391 MET n 1 392 GLY n 1 393 LEU n 1 394 PHE n 1 395 PHE n 1 396 GLY n 1 397 THR n 1 398 LEU n 1 399 THR n 1 400 ILE n 1 401 THR n 1 402 LEU n 1 403 THR n 1 404 LEU n 1 405 GLN n 1 406 ASP n 1 407 HIS n 1 408 ALA n 1 409 PRO n 1 410 TRP n 1 411 VAL n 1 412 PRO n 1 413 TYR n 1 414 LEU n 1 415 SER n 1 416 ILE n 1 417 VAL n 1 418 GLY n 1 419 ILE n 1 420 LEU n 1 421 ALA n 1 422 ILE n 1 423 ILE n 1 424 ALA n 1 425 SER n 1 426 PHE n 1 427 CYS n 1 428 SER n 1 429 GLY n 1 430 PRO n 1 431 GLY n 1 432 GLY n 1 433 ILE n 1 434 PRO n 1 435 PHE n 1 436 ILE n 1 437 LEU n 1 438 THR n 1 439 GLY n 1 440 GLU n 1 441 PHE n 1 442 PHE n 1 443 GLN n 1 444 GLN n 1 445 SER n 1 446 GLN n 1 447 ARG n 1 448 PRO n 1 449 ALA n 1 450 ALA n 1 451 PHE n 1 452 ILE n 1 453 ILE n 1 454 ALA n 1 455 GLY n 1 456 THR n 1 457 VAL n 1 458 ASN n 1 459 TRP n 1 460 LEU n 1 461 SER n 1 462 ASN n 1 463 PHE n 1 464 ALA n 1 465 VAL n 1 466 GLY n 1 467 LEU n 1 468 LEU n 1 469 PHE n 1 470 PRO n 1 471 PHE n 1 472 ILE n 1 473 GLN n 1 474 LYS n 1 475 SER n 1 476 LEU n 1 477 ASP n 1 478 THR n 1 479 TYR n 1 480 CYS n 1 481 PHE n 1 482 LEU n 1 483 VAL n 1 484 PHE n 1 485 ALA n 1 486 THR n 1 487 ILE n 1 488 CYS n 1 489 ILE n 1 490 THR n 1 491 GLY n 1 492 ALA n 1 493 ILE n 1 494 TYR n 1 495 LEU n 1 496 TYR n 1 497 PHE n 1 498 VAL n 1 499 LEU n 1 500 PRO n 1 501 GLU n 1 502 THR n 1 503 LYS n 1 504 ASN n 1 505 ARG n 1 506 THR n 1 507 TYR n 1 508 ALA n 1 509 GLU n 1 510 ILE n 1 511 SER n 1 512 GLN n 1 513 ALA n 1 514 PHE n 1 515 SER n 1 516 LYS n 1 517 ARG n 1 518 ASN n 1 519 LYS n 1 520 ALA n 1 521 TYR n 1 522 PRO n 1 523 PRO n 1 524 GLU n 1 525 GLU n 1 526 LYS n 1 527 ILE n 1 528 ASP n 1 529 SER n 1 530 ALA n 1 531 VAL n 1 532 THR n 1 533 ASP n 1 534 GLY n 1 535 LYS n 1 536 ILE n 1 537 ASN n 1 538 GLY n 1 539 ARG n 1 540 PRO n 1 541 GLY n 1 542 THR n 1 543 GLU n 1 544 ASN n 1 545 LEU n 1 546 TYR n 1 547 PHE n 1 548 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 548 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'SLC2A9, GLUT9' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293F _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGlcpNAcb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 URC non-polymer . 'URIC ACID' '7,9-DIHYDRO-1H-PURINE-2,6,8(3H)-TRIONE' 'C5 H4 N4 O3' 168.110 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ARG 3 3 ? ? ? A . n A 1 4 LYS 4 4 ? ? ? A . n A 1 5 GLN 5 5 ? ? ? A . n A 1 6 ASN 6 6 ? ? ? A . n A 1 7 ARG 7 7 ? ? ? A . n A 1 8 ASN 8 8 ? ? ? A . n A 1 9 SER 9 9 ? ? ? A . n A 1 10 LYS 10 10 ? ? ? A . n A 1 11 GLU 11 11 ? ? ? A . n A 1 12 LEU 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 LEU 14 14 ? ? ? A . n A 1 15 VAL 15 15 ? ? ? A . n A 1 16 PRO 16 16 ? ? ? A . n A 1 17 LEU 17 17 ? ? ? A . n A 1 18 THR 18 18 ? ? ? A . n A 1 19 ASP 19 19 ? ? ? A . n A 1 20 ASP 20 20 ? ? ? A . n A 1 21 THR 21 21 ? ? ? A . n A 1 22 SER 22 22 ? ? ? A . n A 1 23 HIS 23 23 ? ? ? A . n A 1 24 ALA 24 24 ? ? ? A . n A 1 25 GLY 25 25 ? ? ? A . n A 1 26 PRO 26 26 ? ? ? A . n A 1 27 PRO 27 27 ? ? ? A . n A 1 28 GLY 28 28 ? ? ? A . n A 1 29 PRO 29 29 ? ? ? A . n A 1 30 GLY 30 30 ? ? ? A . n A 1 31 ARG 31 31 ? ? ? A . n A 1 32 ALA 32 32 ? ? ? A . n A 1 33 LEU 33 33 ? ? ? A . n A 1 34 LEU 34 34 ? ? ? A . n A 1 35 GLU 35 35 ? ? ? A . n A 1 36 CYS 36 36 ? ? ? A . n A 1 37 ASP 37 37 ? ? ? A . n A 1 38 HIS 38 38 ? ? ? A . n A 1 39 LEU 39 39 ? ? ? A . n A 1 40 ARG 40 40 ? ? ? A . n A 1 41 SER 41 41 ? ? ? A . n A 1 42 GLY 42 42 ? ? ? A . n A 1 43 VAL 43 43 ? ? ? A . n A 1 44 PRO 44 44 ? ? ? A . n A 1 45 GLY 45 45 ? ? ? A . n A 1 46 GLY 46 46 ? ? ? A . n A 1 47 ARG 47 47 ? ? ? A . n A 1 48 ARG 48 48 ? ? ? A . n A 1 49 ARG 49 49 ? ? ? A . n A 1 50 LYS 50 50 ? ? ? A . n A 1 51 ASP 51 51 ? ? ? A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 CYS 54 54 54 CYS CYS A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ALA 62 62 62 ALA ALA A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ALA 64 64 64 ALA ALA A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 TYR 71 71 71 TYR TYR A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 VAL 77 77 77 VAL VAL A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 THR 82 82 82 THR THR A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 TYR 84 84 84 TYR TYR A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 PHE 88 88 88 PHE PHE A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 TRP 93 93 93 TRP TRP A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ARG 95 95 95 ARG ARG A . n A 1 96 ARG 96 96 96 ARG ARG A . n A 1 97 HIS 97 97 97 HIS HIS A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 PRO 103 103 103 PRO PRO A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 THR 105 105 105 THR THR A . n A 1 106 LEU 106 106 106 LEU LEU A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 LEU 109 109 109 LEU LEU A . n A 1 110 TRP 110 110 110 TRP TRP A . n A 1 111 SER 111 111 111 SER SER A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 ILE 116 116 116 ILE ILE A . n A 1 117 PHE 117 117 117 PHE PHE A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 GLY 120 120 120 GLY GLY A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 LEU 122 122 122 LEU LEU A . n A 1 123 VAL 123 123 123 VAL VAL A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 THR 125 125 125 THR THR A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 VAL 128 128 128 VAL VAL A . n A 1 129 LYS 129 129 129 LYS LYS A . n A 1 130 MET 130 130 130 MET MET A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 LEU 135 135 135 LEU LEU A . n A 1 136 GLY 136 136 136 GLY GLY A . n A 1 137 ARG 137 137 137 ARG ARG A . n A 1 138 LYS 138 138 138 LYS LYS A . n A 1 139 HIS 139 139 139 HIS HIS A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 LEU 142 142 142 LEU LEU A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ASN 144 144 144 ASN ASN A . n A 1 145 ASN 145 145 145 ASN ASN A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 PHE 147 147 147 PHE PHE A . n A 1 148 ALA 148 148 148 ALA ALA A . n A 1 149 ILE 149 149 149 ILE ILE A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 LEU 153 153 153 LEU LEU A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 MET 155 155 155 MET MET A . n A 1 156 ALA 156 156 156 ALA ALA A . n A 1 157 CYS 157 157 157 CYS CYS A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 ALA 161 161 161 ALA ALA A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 GLU 165 165 165 GLU GLU A . n A 1 166 MET 166 166 166 MET MET A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 GLY 170 170 170 GLY GLY A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 MET 174 174 174 MET MET A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 ILE 176 176 176 ILE ILE A . n A 1 177 ASP 177 177 177 ASP ASP A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 SER 183 183 183 SER SER A . n A 1 184 VAL 184 184 184 VAL VAL A . n A 1 185 LEU 185 185 185 LEU LEU A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 MET 187 187 187 MET MET A . n A 1 188 TYR 188 188 188 TYR TYR A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 SER 190 190 190 SER SER A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 SER 193 193 193 SER SER A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 LYS 195 195 195 LYS LYS A . n A 1 196 GLU 196 196 196 GLU GLU A . n A 1 197 ILE 197 197 197 ILE ILE A . n A 1 198 ARG 198 198 198 ARG ARG A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 SER 200 200 200 SER SER A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 GLN 203 203 203 GLN GLN A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 THR 205 205 205 THR THR A . n A 1 206 ALA 206 206 206 ALA ALA A . n A 1 207 ILE 207 207 207 ILE ILE A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 CYS 210 210 210 CYS CYS A . n A 1 211 ILE 211 211 211 ILE ILE A . n A 1 212 GLY 212 212 212 GLY GLY A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 PHE 214 214 214 PHE PHE A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 GLN 217 217 217 GLN GLN A . n A 1 218 LEU 218 218 218 LEU LEU A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 PRO 222 222 222 PRO PRO A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 LEU 225 225 225 LEU LEU A . n A 1 226 GLY 226 226 226 GLY GLY A . n A 1 227 LYS 227 227 227 LYS LYS A . n A 1 228 GLU 228 228 228 GLU GLU A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 THR 230 230 230 THR THR A . n A 1 231 TRP 231 231 231 TRP TRP A . n A 1 232 PRO 232 232 232 PRO PRO A . n A 1 233 TYR 233 233 233 TYR TYR A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 GLY 236 236 236 GLY GLY A . n A 1 237 VAL 237 237 237 VAL VAL A . n A 1 238 ILE 238 238 238 ILE ILE A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 VAL 240 240 240 VAL VAL A . n A 1 241 PRO 241 241 241 PRO PRO A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 GLN 245 245 245 GLN GLN A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 LEU 247 247 247 LEU LEU A . n A 1 248 SER 248 248 248 SER SER A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 PRO 250 250 250 PRO PRO A . n A 1 251 PHE 251 251 251 PHE PHE A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 PRO 253 253 253 PRO PRO A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 SER 255 255 255 SER SER A . n A 1 256 PRO 256 256 256 PRO PRO A . n A 1 257 ARG 257 257 257 ARG ARG A . n A 1 258 TYR 258 258 258 TYR TYR A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 LEU 260 260 260 LEU LEU A . n A 1 261 LEU 261 261 261 LEU LEU A . n A 1 262 GLU 262 262 262 GLU GLU A . n A 1 263 LYS 263 263 263 LYS LYS A . n A 1 264 HIS 264 264 264 HIS HIS A . n A 1 265 ASN 265 265 265 ASN ASN A . n A 1 266 GLU 266 266 266 GLU GLU A . n A 1 267 ALA 267 267 267 ALA ALA A . n A 1 268 ARG 268 268 268 ARG ARG A . n A 1 269 ALA 269 269 269 ALA ALA A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 LYS 271 271 271 LYS LYS A . n A 1 272 ALA 272 272 272 ALA ALA A . n A 1 273 PHE 273 273 273 PHE PHE A . n A 1 274 GLN 274 274 274 GLN GLN A . n A 1 275 THR 275 275 275 THR THR A . n A 1 276 PHE 276 276 276 PHE PHE A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 GLY 278 278 278 GLY GLY A . n A 1 279 LYS 279 279 279 LYS LYS A . n A 1 280 ALA 280 280 280 ALA ALA A . n A 1 281 ASP 281 281 281 ASP ASP A . n A 1 282 VAL 282 282 282 VAL VAL A . n A 1 283 SER 283 283 283 SER SER A . n A 1 284 GLN 284 284 284 GLN GLN A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 VAL 286 286 286 VAL VAL A . n A 1 287 GLU 287 287 287 GLU GLU A . n A 1 288 GLU 288 288 288 GLU GLU A . n A 1 289 VAL 289 289 289 VAL VAL A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 ALA 291 291 291 ALA ALA A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 ARG 294 294 294 ARG ARG A . n A 1 295 VAL 295 295 295 VAL VAL A . n A 1 296 GLN 296 296 296 GLN GLN A . n A 1 297 ARG 297 297 297 ARG ARG A . n A 1 298 SER 298 298 298 SER SER A . n A 1 299 ILE 299 299 299 ILE ILE A . n A 1 300 ARG 300 300 300 ARG ARG A . n A 1 301 LEU 301 301 301 LEU LEU A . n A 1 302 VAL 302 302 302 VAL VAL A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 VAL 304 304 304 VAL VAL A . n A 1 305 LEU 305 305 305 LEU LEU A . n A 1 306 GLU 306 306 306 GLU GLU A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 LEU 308 308 308 LEU LEU A . n A 1 309 ARG 309 309 309 ARG ARG A . n A 1 310 ALA 310 310 310 ALA ALA A . n A 1 311 PRO 311 311 311 PRO PRO A . n A 1 312 TYR 312 312 312 TYR TYR A . n A 1 313 VAL 313 313 313 VAL VAL A . n A 1 314 ARG 314 314 314 ARG ARG A . n A 1 315 TRP 315 315 315 TRP TRP A . n A 1 316 GLN 316 316 316 GLN GLN A . n A 1 317 VAL 317 317 317 VAL VAL A . n A 1 318 VAL 318 318 318 VAL VAL A . n A 1 319 THR 319 319 319 THR THR A . n A 1 320 VAL 320 320 320 VAL VAL A . n A 1 321 ILE 321 321 321 ILE ILE A . n A 1 322 VAL 322 322 322 VAL VAL A . n A 1 323 THR 323 323 323 THR THR A . n A 1 324 MET 324 324 324 MET MET A . n A 1 325 ALA 325 325 325 ALA ALA A . n A 1 326 CYS 326 326 326 CYS CYS A . n A 1 327 TYR 327 327 327 TYR TYR A . n A 1 328 GLN 328 328 328 GLN GLN A . n A 1 329 LEU 329 329 329 LEU LEU A . n A 1 330 CYS 330 330 330 CYS CYS A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 LEU 332 332 332 LEU LEU A . n A 1 333 ASN 333 333 333 ASN ASN A . n A 1 334 ALA 334 334 334 ALA ALA A . n A 1 335 ILE 335 335 335 ILE ILE A . n A 1 336 TRP 336 336 336 TRP TRP A . n A 1 337 PHE 337 337 337 PHE PHE A . n A 1 338 TYR 338 338 338 TYR TYR A . n A 1 339 THR 339 339 339 THR THR A . n A 1 340 ASN 340 340 340 ASN ASN A . n A 1 341 SER 341 341 341 SER SER A . n A 1 342 ILE 342 342 342 ILE ILE A . n A 1 343 PHE 343 343 343 PHE PHE A . n A 1 344 GLY 344 344 344 GLY GLY A . n A 1 345 LYS 345 345 345 LYS LYS A . n A 1 346 ALA 346 346 346 ALA ALA A . n A 1 347 GLY 347 347 347 GLY GLY A . n A 1 348 ILE 348 348 348 ILE ILE A . n A 1 349 PRO 349 349 349 PRO PRO A . n A 1 350 PRO 350 350 350 PRO PRO A . n A 1 351 ALA 351 351 351 ALA ALA A . n A 1 352 LYS 352 352 352 LYS LYS A . n A 1 353 ILE 353 353 353 ILE ILE A . n A 1 354 PRO 354 354 354 PRO PRO A . n A 1 355 TYR 355 355 355 TYR TYR A . n A 1 356 VAL 356 356 356 VAL VAL A . n A 1 357 THR 357 357 357 THR THR A . n A 1 358 LEU 358 358 358 LEU LEU A . n A 1 359 SER 359 359 359 SER SER A . n A 1 360 THR 360 360 360 THR THR A . n A 1 361 GLY 361 361 361 GLY GLY A . n A 1 362 GLY 362 362 362 GLY GLY A . n A 1 363 ILE 363 363 363 ILE ILE A . n A 1 364 GLU 364 364 364 GLU GLU A . n A 1 365 THR 365 365 365 THR THR A . n A 1 366 LEU 366 366 366 LEU LEU A . n A 1 367 ALA 367 367 367 ALA ALA A . n A 1 368 ALA 368 368 368 ALA ALA A . n A 1 369 VAL 369 369 369 VAL VAL A . n A 1 370 PHE 370 370 370 PHE PHE A . n A 1 371 SER 371 371 371 SER SER A . n A 1 372 GLY 372 372 372 GLY GLY A . n A 1 373 LEU 373 373 373 LEU LEU A . n A 1 374 VAL 374 374 374 VAL VAL A . n A 1 375 ILE 375 375 375 ILE ILE A . n A 1 376 GLU 376 376 376 GLU GLU A . n A 1 377 HIS 377 377 377 HIS HIS A . n A 1 378 LEU 378 378 378 LEU LEU A . n A 1 379 GLY 379 379 379 GLY GLY A . n A 1 380 ARG 380 380 380 ARG ARG A . n A 1 381 ARG 381 381 381 ARG ARG A . n A 1 382 PRO 382 382 382 PRO PRO A . n A 1 383 LEU 383 383 383 LEU LEU A . n A 1 384 LEU 384 384 384 LEU LEU A . n A 1 385 ILE 385 385 385 ILE ILE A . n A 1 386 GLY 386 386 386 GLY GLY A . n A 1 387 GLY 387 387 387 GLY GLY A . n A 1 388 PHE 388 388 388 PHE PHE A . n A 1 389 GLY 389 389 389 GLY GLY A . n A 1 390 LEU 390 390 390 LEU LEU A . n A 1 391 MET 391 391 391 MET MET A . n A 1 392 GLY 392 392 392 GLY GLY A . n A 1 393 LEU 393 393 393 LEU LEU A . n A 1 394 PHE 394 394 394 PHE PHE A . n A 1 395 PHE 395 395 395 PHE PHE A . n A 1 396 GLY 396 396 396 GLY GLY A . n A 1 397 THR 397 397 397 THR THR A . n A 1 398 LEU 398 398 398 LEU LEU A . n A 1 399 THR 399 399 399 THR THR A . n A 1 400 ILE 400 400 400 ILE ILE A . n A 1 401 THR 401 401 401 THR THR A . n A 1 402 LEU 402 402 402 LEU LEU A . n A 1 403 THR 403 403 403 THR THR A . n A 1 404 LEU 404 404 404 LEU LEU A . n A 1 405 GLN 405 405 405 GLN GLN A . n A 1 406 ASP 406 406 406 ASP ASP A . n A 1 407 HIS 407 407 407 HIS HIS A . n A 1 408 ALA 408 408 408 ALA ALA A . n A 1 409 PRO 409 409 409 PRO PRO A . n A 1 410 TRP 410 410 410 TRP TRP A . n A 1 411 VAL 411 411 411 VAL VAL A . n A 1 412 PRO 412 412 412 PRO PRO A . n A 1 413 TYR 413 413 413 TYR TYR A . n A 1 414 LEU 414 414 414 LEU LEU A . n A 1 415 SER 415 415 415 SER SER A . n A 1 416 ILE 416 416 416 ILE ILE A . n A 1 417 VAL 417 417 417 VAL VAL A . n A 1 418 GLY 418 418 418 GLY GLY A . n A 1 419 ILE 419 419 419 ILE ILE A . n A 1 420 LEU 420 420 420 LEU LEU A . n A 1 421 ALA 421 421 421 ALA ALA A . n A 1 422 ILE 422 422 422 ILE ILE A . n A 1 423 ILE 423 423 423 ILE ILE A . n A 1 424 ALA 424 424 424 ALA ALA A . n A 1 425 SER 425 425 425 SER SER A . n A 1 426 PHE 426 426 426 PHE PHE A . n A 1 427 CYS 427 427 427 CYS CYS A . n A 1 428 SER 428 428 428 SER SER A . n A 1 429 GLY 429 429 429 GLY GLY A . n A 1 430 PRO 430 430 430 PRO PRO A . n A 1 431 GLY 431 431 431 GLY GLY A . n A 1 432 GLY 432 432 432 GLY GLY A . n A 1 433 ILE 433 433 433 ILE ILE A . n A 1 434 PRO 434 434 434 PRO PRO A . n A 1 435 PHE 435 435 435 PHE PHE A . n A 1 436 ILE 436 436 436 ILE ILE A . n A 1 437 LEU 437 437 437 LEU LEU A . n A 1 438 THR 438 438 438 THR THR A . n A 1 439 GLY 439 439 439 GLY GLY A . n A 1 440 GLU 440 440 440 GLU GLU A . n A 1 441 PHE 441 441 441 PHE PHE A . n A 1 442 PHE 442 442 442 PHE PHE A . n A 1 443 GLN 443 443 443 GLN GLN A . n A 1 444 GLN 444 444 444 GLN GLN A . n A 1 445 SER 445 445 445 SER SER A . n A 1 446 GLN 446 446 446 GLN GLN A . n A 1 447 ARG 447 447 447 ARG ARG A . n A 1 448 PRO 448 448 448 PRO PRO A . n A 1 449 ALA 449 449 449 ALA ALA A . n A 1 450 ALA 450 450 450 ALA ALA A . n A 1 451 PHE 451 451 451 PHE PHE A . n A 1 452 ILE 452 452 452 ILE ILE A . n A 1 453 ILE 453 453 453 ILE ILE A . n A 1 454 ALA 454 454 454 ALA ALA A . n A 1 455 GLY 455 455 455 GLY GLY A . n A 1 456 THR 456 456 456 THR THR A . n A 1 457 VAL 457 457 457 VAL VAL A . n A 1 458 ASN 458 458 458 ASN ASN A . n A 1 459 TRP 459 459 459 TRP TRP A . n A 1 460 LEU 460 460 460 LEU LEU A . n A 1 461 SER 461 461 461 SER SER A . n A 1 462 ASN 462 462 462 ASN ASN A . n A 1 463 PHE 463 463 463 PHE PHE A . n A 1 464 ALA 464 464 464 ALA ALA A . n A 1 465 VAL 465 465 465 VAL VAL A . n A 1 466 GLY 466 466 466 GLY GLY A . n A 1 467 LEU 467 467 467 LEU LEU A . n A 1 468 LEU 468 468 468 LEU LEU A . n A 1 469 PHE 469 469 469 PHE PHE A . n A 1 470 PRO 470 470 470 PRO PRO A . n A 1 471 PHE 471 471 471 PHE PHE A . n A 1 472 ILE 472 472 472 ILE ILE A . n A 1 473 GLN 473 473 473 GLN GLN A . n A 1 474 LYS 474 474 474 LYS LYS A . n A 1 475 SER 475 475 475 SER SER A . n A 1 476 LEU 476 476 476 LEU LEU A . n A 1 477 ASP 477 477 477 ASP ASP A . n A 1 478 THR 478 478 478 THR THR A . n A 1 479 TYR 479 479 479 TYR TYR A . n A 1 480 CYS 480 480 480 CYS CYS A . n A 1 481 PHE 481 481 481 PHE PHE A . n A 1 482 LEU 482 482 482 LEU LEU A . n A 1 483 VAL 483 483 483 VAL VAL A . n A 1 484 PHE 484 484 484 PHE PHE A . n A 1 485 ALA 485 485 485 ALA ALA A . n A 1 486 THR 486 486 486 THR THR A . n A 1 487 ILE 487 487 487 ILE ILE A . n A 1 488 CYS 488 488 488 CYS CYS A . n A 1 489 ILE 489 489 489 ILE ILE A . n A 1 490 THR 490 490 490 THR THR A . n A 1 491 GLY 491 491 491 GLY GLY A . n A 1 492 ALA 492 492 492 ALA ALA A . n A 1 493 ILE 493 493 493 ILE ILE A . n A 1 494 TYR 494 494 494 TYR TYR A . n A 1 495 LEU 495 495 495 LEU LEU A . n A 1 496 TYR 496 496 496 TYR TYR A . n A 1 497 PHE 497 497 497 PHE PHE A . n A 1 498 VAL 498 498 498 VAL VAL A . n A 1 499 LEU 499 499 499 LEU LEU A . n A 1 500 PRO 500 500 500 PRO PRO A . n A 1 501 GLU 501 501 501 GLU GLU A . n A 1 502 THR 502 502 502 THR THR A . n A 1 503 LYS 503 503 503 LYS LYS A . n A 1 504 ASN 504 504 504 ASN ASN A . n A 1 505 ARG 505 505 505 ARG ARG A . n A 1 506 THR 506 506 506 THR THR A . n A 1 507 TYR 507 507 507 TYR TYR A . n A 1 508 ALA 508 508 508 ALA ALA A . n A 1 509 GLU 509 509 509 GLU GLU A . n A 1 510 ILE 510 510 510 ILE ILE A . n A 1 511 SER 511 511 511 SER SER A . n A 1 512 GLN 512 512 512 GLN GLN A . n A 1 513 ALA 513 513 513 ALA ALA A . n A 1 514 PHE 514 514 514 PHE PHE A . n A 1 515 SER 515 515 515 SER SER A . n A 1 516 LYS 516 516 516 LYS LYS A . n A 1 517 ARG 517 517 517 ARG ARG A . n A 1 518 ASN 518 518 518 ASN ASN A . n A 1 519 LYS 519 519 519 LYS LYS A . n A 1 520 ALA 520 520 520 ALA ALA A . n A 1 521 TYR 521 521 521 TYR TYR A . n A 1 522 PRO 522 522 522 PRO PRO A . n A 1 523 PRO 523 523 ? ? ? A . n A 1 524 GLU 524 524 ? ? ? A . n A 1 525 GLU 525 525 ? ? ? A . n A 1 526 LYS 526 526 ? ? ? A . n A 1 527 ILE 527 527 ? ? ? A . n A 1 528 ASP 528 528 ? ? ? A . n A 1 529 SER 529 529 ? ? ? A . n A 1 530 ALA 530 530 ? ? ? A . n A 1 531 VAL 531 531 ? ? ? A . n A 1 532 THR 532 532 ? ? ? A . n A 1 533 ASP 533 533 ? ? ? A . n A 1 534 GLY 534 534 ? ? ? A . n A 1 535 LYS 535 535 ? ? ? A . n A 1 536 ILE 536 536 ? ? ? A . n A 1 537 ASN 537 537 ? ? ? A . n A 1 538 GLY 538 538 ? ? ? A . n A 1 539 ARG 539 539 ? ? ? A . n A 1 540 PRO 540 540 ? ? ? A . n A 1 541 GLY 541 541 ? ? ? A . n A 1 542 THR 542 542 ? ? ? A . n A 1 543 GLU 543 543 ? ? ? A . n A 1 544 ASN 544 544 ? ? ? A . n A 1 545 LEU 545 545 ? ? ? A . n A 1 546 TYR 546 546 ? ? ? A . n A 1 547 PHE 547 547 ? ? ? A . n A 1 548 GLN 548 548 ? ? ? A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 523 n B 2 NAG 2 B NAG 2 A NAG 524 n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id URC _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id URC _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id URC _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 601 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id URC _pdbx_nonpoly_scheme.auth_mon_id URC _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 8ZXM _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8ZXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8ZXM _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 127.209 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.790 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8ZXM _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.39 _refine.ls_d_res_low 3.39 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 29278 _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.42055 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.42055 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'PARAMETERS FOR MASK CACLULATION' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.695 _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B 16.093 _refine.overall_SU_ML 0.253 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id 1 _refine_hist.details ? _refine_hist.d_res_high . _refine_hist.d_res_low . _refine_hist.number_atoms_solvent ? _refine_hist.number_atoms_total 3666 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein ? _refine_hist.pdbx_number_atoms_nucleic_acid ? _refine_hist.pdbx_number_atoms_ligand ? _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.006 0.011 3762 ? r_bond_refined_d ? ? 'ELECTRON MICROSCOPY' ? 0.000 0.016 3675 ? r_bond_other_d ? ? 'ELECTRON MICROSCOPY' ? 1.525 1.637 5132 ? r_angle_refined_deg ? ? 'ELECTRON MICROSCOPY' ? 0.491 1.555 8432 ? r_angle_other_deg ? ? 'ELECTRON MICROSCOPY' ? 6.446 5.000 470 ? r_dihedral_angle_1_deg ? ? 'ELECTRON MICROSCOPY' ? 3.429 5.000 18 ? r_dihedral_angle_2_deg ? ? 'ELECTRON MICROSCOPY' ? 14.526 10.000 594 ? r_dihedral_angle_3_deg ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'ELECTRON MICROSCOPY' ? 0.082 0.200 606 ? r_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.006 0.020 4323 ? r_gen_planes_refined ? ? 'ELECTRON MICROSCOPY' ? 0.001 0.020 875 ? r_gen_planes_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_nbtor_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_vdw_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_hbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'ELECTRON MICROSCOPY' ? 14.667 11.135 1883 ? r_mcbond_it ? ? 'ELECTRON MICROSCOPY' ? 14.666 11.136 1883 ? r_mcbond_other ? ? 'ELECTRON MICROSCOPY' ? 21.987 20.176 2352 ? r_mcangle_it ? ? 'ELECTRON MICROSCOPY' ? 21.987 20.188 2353 ? r_mcangle_other ? ? 'ELECTRON MICROSCOPY' ? 19.479 13.961 1879 ? r_scbond_it ? ? 'ELECTRON MICROSCOPY' ? 19.475 13.961 1879 ? r_scbond_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_scangle_it ? ? 'ELECTRON MICROSCOPY' ? 30.355 24.557 2781 ? r_scangle_other ? ? 'ELECTRON MICROSCOPY' ? 36.197 139.58 14951 ? r_long_range_B_refined ? ? 'ELECTRON MICROSCOPY' ? 36.197 139.58 14952 ? r_long_range_B_other ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_rigid_bond_restr ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_free ? ? 'ELECTRON MICROSCOPY' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_ls_shell.d_res_high 3.300 _refine_ls_shell.d_res_low 3.386 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 0 _refine_ls_shell.number_reflns_R_work 2178 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 2.365 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? _refine_ls_shell.R_factor_R_free 0.000 # _struct.entry_id 8ZXM _struct.title 'Cryo-EM structure of human GLUT9 bound to urate' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8ZXM _struct_keywords.text 'Urate, Transporter, Hypouricemia, RHUC, TRANSPORT PROTEIN' _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GTR9_HUMAN _struct_ref.pdbx_db_accession Q9NRM0 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MARKQNRNSKELGLVPLTDDTSHAGPPGPGRALLECDHLRSGVPGGRRRKDWSCSLLVASLAGAFGSSFLYGYNLSVVNA PTPYIKAFYNESWERRHGRPIDPDTLTLLWSVTVSIFAIGGLVGTLIVKMIGKVLGRKHTLLANNGFAISAALLMACSLQ AGAFEMLIVGRFIMGIDGGVALSVLPMYLSEISPKEIRGSLGQVTAIFICIGVFTGQLLGLPELLGKESTWPYLFGVIVV PAVVQLLSLPFLPDSPRYLLLEKHNEARAVKAFQTFLGKADVSQEVEEVLAESRVQRSIRLVSVLELLRAPYVRWQVVTV IVTMACYQLCGLNAIWFYTNSIFGKAGIPPAKIPYVTLSTGGIETLAAVFSGLVIEHLGRRPLLIGGFGLMGLFFGTLTI TLTLQDHAPWVPYLSIVGILAIIASFCSGPGGIPFILTGEFFQQSQRPAAFIIAGTVNWLSNFAVGLLFPFIQKSLDTYC FLVFATICITGAIYLYFVLPETKNRTYAEISQAFSKRNKAYPPEEKIDSAVTDGKINGRP ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8ZXM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 540 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9NRM0 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 540 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 540 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8ZXM GLY A 541 ? UNP Q9NRM0 ? ? 'expression tag' 541 1 1 8ZXM THR A 542 ? UNP Q9NRM0 ? ? 'expression tag' 542 2 1 8ZXM GLU A 543 ? UNP Q9NRM0 ? ? 'expression tag' 543 3 1 8ZXM ASN A 544 ? UNP Q9NRM0 ? ? 'expression tag' 544 4 1 8ZXM LEU A 545 ? UNP Q9NRM0 ? ? 'expression tag' 545 5 1 8ZXM TYR A 546 ? UNP Q9NRM0 ? ? 'expression tag' 546 6 1 8ZXM PHE A 547 ? UNP Q9NRM0 ? ? 'expression tag' 547 7 1 8ZXM GLN A 548 ? UNP Q9NRM0 ? ? 'expression tag' 548 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 53 ? PHE A 65 ? SER A 53 PHE A 65 1 ? 13 HELX_P HELX_P2 AA2 SER A 68 ? LEU A 75 ? SER A 68 LEU A 75 1 ? 8 HELX_P HELX_P3 AA3 PRO A 81 ? GLY A 98 ? PRO A 81 GLY A 98 1 ? 18 HELX_P HELX_P4 AA4 ASP A 102 ? GLY A 132 ? ASP A 102 GLY A 132 1 ? 31 HELX_P HELX_P5 AA5 GLY A 136 ? ASN A 144 ? GLY A 136 ASN A 144 1 ? 9 HELX_P HELX_P6 AA6 ASN A 144 ? ALA A 156 ? ASN A 144 ALA A 156 1 ? 13 HELX_P HELX_P7 AA7 CYS A 157 ? GLY A 162 ? CYS A 157 GLY A 162 1 ? 6 HELX_P HELX_P8 AA8 PHE A 164 ? SER A 193 ? PHE A 164 SER A 193 1 ? 30 HELX_P HELX_P9 AA9 SER A 200 ? LEU A 219 ? SER A 200 LEU A 219 1 ? 20 HELX_P HELX_P10 AB1 TRP A 231 ? VAL A 237 ? TRP A 231 VAL A 237 1 ? 7 HELX_P HELX_P11 AB2 ILE A 238 ? LEU A 247 ? ILE A 238 LEU A 247 1 ? 10 HELX_P HELX_P12 AB3 SER A 248 ? LEU A 252 ? SER A 248 LEU A 252 5 ? 5 HELX_P HELX_P13 AB4 ARG A 257 ? GLU A 262 ? ARG A 257 GLU A 262 1 ? 6 HELX_P HELX_P14 AB5 ASN A 265 ? GLY A 278 ? ASN A 265 GLY A 278 1 ? 14 HELX_P HELX_P15 AB6 VAL A 282 ? ARG A 297 ? VAL A 282 ARG A 297 1 ? 16 HELX_P HELX_P16 AB7 SER A 303 ? LEU A 308 ? SER A 303 LEU A 308 1 ? 6 HELX_P HELX_P17 AB8 ALA A 310 ? TYR A 312 ? ALA A 310 TYR A 312 5 ? 3 HELX_P HELX_P18 AB9 VAL A 313 ? CYS A 330 ? VAL A 313 CYS A 330 1 ? 18 HELX_P HELX_P19 AC1 GLY A 331 ? TYR A 338 ? GLY A 331 TYR A 338 1 ? 8 HELX_P HELX_P20 AC2 TYR A 338 ? GLY A 347 ? TYR A 338 GLY A 347 1 ? 10 HELX_P HELX_P21 AC3 LYS A 352 ? PHE A 370 ? LYS A 352 PHE A 370 1 ? 19 HELX_P HELX_P22 AC4 SER A 371 ? GLY A 379 ? SER A 371 GLY A 379 1 ? 9 HELX_P HELX_P23 AC5 ARG A 380 ? LEU A 404 ? ARG A 380 LEU A 404 1 ? 25 HELX_P HELX_P24 AC6 VAL A 411 ? SER A 428 ? VAL A 411 SER A 428 1 ? 18 HELX_P HELX_P25 AC7 GLY A 429 ? GLY A 432 ? GLY A 429 GLY A 432 5 ? 4 HELX_P HELX_P26 AC8 ILE A 433 ? PHE A 441 ? ILE A 433 PHE A 441 1 ? 9 HELX_P HELX_P27 AC9 GLN A 446 ? LEU A 467 ? GLN A 446 LEU A 467 1 ? 22 HELX_P HELX_P28 AD1 LEU A 468 ? ASP A 477 ? LEU A 468 ASP A 477 1 ? 10 HELX_P HELX_P29 AD2 THR A 478 ? CYS A 480 ? THR A 478 CYS A 480 5 ? 3 HELX_P HELX_P30 AD3 PHE A 481 ? LEU A 499 ? PHE A 481 LEU A 499 1 ? 19 HELX_P HELX_P31 AD4 THR A 506 ? LYS A 519 ? THR A 506 LYS A 519 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A ASN 90 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 90 B NAG 1 1_555 ? ? ? ? ? ? ? 1.420 ? N-Glycosylation covale2 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id NAG _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id ASN _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 90 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id NAG _pdbx_modification_feature.auth_asym_id B _pdbx_modification_feature.auth_seq_id 1 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id ASN _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 90 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C1 _pdbx_modification_feature.modified_residue_id_linking_atom ND2 _pdbx_modification_feature.modified_residue_id ASN _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id NAG _pdbx_modification_feature.type N-Glycosylation _pdbx_modification_feature.category Carbohydrate # _pdbx_entry_details.entry_id 8ZXM _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 67 ? ? -139.10 -33.25 2 1 ARG A 96 ? ? -130.12 -41.92 3 1 LYS A 195 ? ? -78.12 21.98 4 1 LEU A 224 ? ? -105.27 -125.11 5 1 SER A 248 ? ? -135.67 -50.50 6 1 GLU A 262 ? ? -130.33 -35.96 7 1 LEU A 404 ? ? -94.67 30.97 8 1 ASP A 477 ? ? 55.00 -116.74 9 1 VAL A 498 ? ? -132.05 -52.69 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 8ZXM _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 8ZXM _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.39 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 180531 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source RECOMBINANT _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Glucose transporter 9' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 8ZXM _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 1600 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 8ZXM _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 8ZXM _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A ARG 3 ? A ARG 3 4 1 Y 1 A LYS 4 ? A LYS 4 5 1 Y 1 A GLN 5 ? A GLN 5 6 1 Y 1 A ASN 6 ? A ASN 6 7 1 Y 1 A ARG 7 ? A ARG 7 8 1 Y 1 A ASN 8 ? A ASN 8 9 1 Y 1 A SER 9 ? A SER 9 10 1 Y 1 A LYS 10 ? A LYS 10 11 1 Y 1 A GLU 11 ? A GLU 11 12 1 Y 1 A LEU 12 ? A LEU 12 13 1 Y 1 A GLY 13 ? A GLY 13 14 1 Y 1 A LEU 14 ? A LEU 14 15 1 Y 1 A VAL 15 ? A VAL 15 16 1 Y 1 A PRO 16 ? A PRO 16 17 1 Y 1 A LEU 17 ? A LEU 17 18 1 Y 1 A THR 18 ? A THR 18 19 1 Y 1 A ASP 19 ? A ASP 19 20 1 Y 1 A ASP 20 ? A ASP 20 21 1 Y 1 A THR 21 ? A THR 21 22 1 Y 1 A SER 22 ? A SER 22 23 1 Y 1 A HIS 23 ? A HIS 23 24 1 Y 1 A ALA 24 ? A ALA 24 25 1 Y 1 A GLY 25 ? A GLY 25 26 1 Y 1 A PRO 26 ? A PRO 26 27 1 Y 1 A PRO 27 ? A PRO 27 28 1 Y 1 A GLY 28 ? A GLY 28 29 1 Y 1 A PRO 29 ? A PRO 29 30 1 Y 1 A GLY 30 ? A GLY 30 31 1 Y 1 A ARG 31 ? A ARG 31 32 1 Y 1 A ALA 32 ? A ALA 32 33 1 Y 1 A LEU 33 ? A LEU 33 34 1 Y 1 A LEU 34 ? A LEU 34 35 1 Y 1 A GLU 35 ? A GLU 35 36 1 Y 1 A CYS 36 ? A CYS 36 37 1 Y 1 A ASP 37 ? A ASP 37 38 1 Y 1 A HIS 38 ? A HIS 38 39 1 Y 1 A LEU 39 ? A LEU 39 40 1 Y 1 A ARG 40 ? A ARG 40 41 1 Y 1 A SER 41 ? A SER 41 42 1 Y 1 A GLY 42 ? A GLY 42 43 1 Y 1 A VAL 43 ? A VAL 43 44 1 Y 1 A PRO 44 ? A PRO 44 45 1 Y 1 A GLY 45 ? A GLY 45 46 1 Y 1 A GLY 46 ? A GLY 46 47 1 Y 1 A ARG 47 ? A ARG 47 48 1 Y 1 A ARG 48 ? A ARG 48 49 1 Y 1 A ARG 49 ? A ARG 49 50 1 Y 1 A LYS 50 ? A LYS 50 51 1 Y 1 A ASP 51 ? A ASP 51 52 1 Y 1 A PRO 523 ? A PRO 523 53 1 Y 1 A GLU 524 ? A GLU 524 54 1 Y 1 A GLU 525 ? A GLU 525 55 1 Y 1 A LYS 526 ? A LYS 526 56 1 Y 1 A ILE 527 ? A ILE 527 57 1 Y 1 A ASP 528 ? A ASP 528 58 1 Y 1 A SER 529 ? A SER 529 59 1 Y 1 A ALA 530 ? A ALA 530 60 1 Y 1 A VAL 531 ? A VAL 531 61 1 Y 1 A THR 532 ? A THR 532 62 1 Y 1 A ASP 533 ? A ASP 533 63 1 Y 1 A GLY 534 ? A GLY 534 64 1 Y 1 A LYS 535 ? A LYS 535 65 1 Y 1 A ILE 536 ? A ILE 536 66 1 Y 1 A ASN 537 ? A ASN 537 67 1 Y 1 A GLY 538 ? A GLY 538 68 1 Y 1 A ARG 539 ? A ARG 539 69 1 Y 1 A PRO 540 ? A PRO 540 70 1 Y 1 A GLY 541 ? A GLY 541 71 1 Y 1 A THR 542 ? A THR 542 72 1 Y 1 A GLU 543 ? A GLU 543 73 1 Y 1 A ASN 544 ? A ASN 544 74 1 Y 1 A LEU 545 ? A LEU 545 75 1 Y 1 A TYR 546 ? A TYR 546 76 1 Y 1 A PHE 547 ? A PHE 547 77 1 Y 1 A GLN 548 ? A GLN 548 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 NAG C1 C N R 247 NAG C2 C N R 248 NAG C3 C N R 249 NAG C4 C N S 250 NAG C5 C N R 251 NAG C6 C N N 252 NAG C7 C N N 253 NAG C8 C N N 254 NAG N2 N N N 255 NAG O1 O N N 256 NAG O3 O N N 257 NAG O4 O N N 258 NAG O5 O N N 259 NAG O6 O N N 260 NAG O7 O N N 261 NAG H1 H N N 262 NAG H2 H N N 263 NAG H3 H N N 264 NAG H4 H N N 265 NAG H5 H N N 266 NAG H61 H N N 267 NAG H62 H N N 268 NAG H81 H N N 269 NAG H82 H N N 270 NAG H83 H N N 271 NAG HN2 H N N 272 NAG HO1 H N N 273 NAG HO3 H N N 274 NAG HO4 H N N 275 NAG HO6 H N N 276 PHE N N N N 277 PHE CA C N S 278 PHE C C N N 279 PHE O O N N 280 PHE CB C N N 281 PHE CG C Y N 282 PHE CD1 C Y N 283 PHE CD2 C Y N 284 PHE CE1 C Y N 285 PHE CE2 C Y N 286 PHE CZ C Y N 287 PHE OXT O N N 288 PHE H H N N 289 PHE H2 H N N 290 PHE HA H N N 291 PHE HB2 H N N 292 PHE HB3 H N N 293 PHE HD1 H N N 294 PHE HD2 H N N 295 PHE HE1 H N N 296 PHE HE2 H N N 297 PHE HZ H N N 298 PHE HXT H N N 299 PRO N N N N 300 PRO CA C N S 301 PRO C C N N 302 PRO O O N N 303 PRO CB C N N 304 PRO CG C N N 305 PRO CD C N N 306 PRO OXT O N N 307 PRO H H N N 308 PRO HA H N N 309 PRO HB2 H N N 310 PRO HB3 H N N 311 PRO HG2 H N N 312 PRO HG3 H N N 313 PRO HD2 H N N 314 PRO HD3 H N N 315 PRO HXT H N N 316 SER N N N N 317 SER CA C N S 318 SER C C N N 319 SER O O N N 320 SER CB C N N 321 SER OG O N N 322 SER OXT O N N 323 SER H H N N 324 SER H2 H N N 325 SER HA H N N 326 SER HB2 H N N 327 SER HB3 H N N 328 SER HG H N N 329 SER HXT H N N 330 THR N N N N 331 THR CA C N S 332 THR C C N N 333 THR O O N N 334 THR CB C N R 335 THR OG1 O N N 336 THR CG2 C N N 337 THR OXT O N N 338 THR H H N N 339 THR H2 H N N 340 THR HA H N N 341 THR HB H N N 342 THR HG1 H N N 343 THR HG21 H N N 344 THR HG22 H N N 345 THR HG23 H N N 346 THR HXT H N N 347 TRP N N N N 348 TRP CA C N S 349 TRP C C N N 350 TRP O O N N 351 TRP CB C N N 352 TRP CG C Y N 353 TRP CD1 C Y N 354 TRP CD2 C Y N 355 TRP NE1 N Y N 356 TRP CE2 C Y N 357 TRP CE3 C Y N 358 TRP CZ2 C Y N 359 TRP CZ3 C Y N 360 TRP CH2 C Y N 361 TRP OXT O N N 362 TRP H H N N 363 TRP H2 H N N 364 TRP HA H N N 365 TRP HB2 H N N 366 TRP HB3 H N N 367 TRP HD1 H N N 368 TRP HE1 H N N 369 TRP HE3 H N N 370 TRP HZ2 H N N 371 TRP HZ3 H N N 372 TRP HH2 H N N 373 TRP HXT H N N 374 TYR N N N N 375 TYR CA C N S 376 TYR C C N N 377 TYR O O N N 378 TYR CB C N N 379 TYR CG C Y N 380 TYR CD1 C Y N 381 TYR CD2 C Y N 382 TYR CE1 C Y N 383 TYR CE2 C Y N 384 TYR CZ C Y N 385 TYR OH O N N 386 TYR OXT O N N 387 TYR H H N N 388 TYR H2 H N N 389 TYR HA H N N 390 TYR HB2 H N N 391 TYR HB3 H N N 392 TYR HD1 H N N 393 TYR HD2 H N N 394 TYR HE1 H N N 395 TYR HE2 H N N 396 TYR HH H N N 397 TYR HXT H N N 398 URC N1 N Y N 399 URC C2 C Y N 400 URC C6 C Y N 401 URC N3 N Y N 402 URC O11 O N N 403 URC C4 C Y N 404 URC C5 C Y N 405 URC N9 N Y N 406 URC O13 O N N 407 URC N7 N Y N 408 URC C8 C Y N 409 URC O24 O N N 410 URC HN1 H N N 411 URC HN3 H N N 412 URC HN9 H N N 413 URC HN7 H N N 414 VAL N N N N 415 VAL CA C N S 416 VAL C C N N 417 VAL O O N N 418 VAL CB C N N 419 VAL CG1 C N N 420 VAL CG2 C N N 421 VAL OXT O N N 422 VAL H H N N 423 VAL H2 H N N 424 VAL HA H N N 425 VAL HB H N N 426 VAL HG11 H N N 427 VAL HG12 H N N 428 VAL HG13 H N N 429 VAL HG21 H N N 430 VAL HG22 H N N 431 VAL HG23 H N N 432 VAL HXT H N N 433 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 NAG C1 C2 sing N N 235 NAG C1 O1 sing N N 236 NAG C1 O5 sing N N 237 NAG C1 H1 sing N N 238 NAG C2 C3 sing N N 239 NAG C2 N2 sing N N 240 NAG C2 H2 sing N N 241 NAG C3 C4 sing N N 242 NAG C3 O3 sing N N 243 NAG C3 H3 sing N N 244 NAG C4 C5 sing N N 245 NAG C4 O4 sing N N 246 NAG C4 H4 sing N N 247 NAG C5 C6 sing N N 248 NAG C5 O5 sing N N 249 NAG C5 H5 sing N N 250 NAG C6 O6 sing N N 251 NAG C6 H61 sing N N 252 NAG C6 H62 sing N N 253 NAG C7 C8 sing N N 254 NAG C7 N2 sing N N 255 NAG C7 O7 doub N N 256 NAG C8 H81 sing N N 257 NAG C8 H82 sing N N 258 NAG C8 H83 sing N N 259 NAG N2 HN2 sing N N 260 NAG O1 HO1 sing N N 261 NAG O3 HO3 sing N N 262 NAG O4 HO4 sing N N 263 NAG O6 HO6 sing N N 264 PHE N CA sing N N 265 PHE N H sing N N 266 PHE N H2 sing N N 267 PHE CA C sing N N 268 PHE CA CB sing N N 269 PHE CA HA sing N N 270 PHE C O doub N N 271 PHE C OXT sing N N 272 PHE CB CG sing N N 273 PHE CB HB2 sing N N 274 PHE CB HB3 sing N N 275 PHE CG CD1 doub Y N 276 PHE CG CD2 sing Y N 277 PHE CD1 CE1 sing Y N 278 PHE CD1 HD1 sing N N 279 PHE CD2 CE2 doub Y N 280 PHE CD2 HD2 sing N N 281 PHE CE1 CZ doub Y N 282 PHE CE1 HE1 sing N N 283 PHE CE2 CZ sing Y N 284 PHE CE2 HE2 sing N N 285 PHE CZ HZ sing N N 286 PHE OXT HXT sing N N 287 PRO N CA sing N N 288 PRO N CD sing N N 289 PRO N H sing N N 290 PRO CA C sing N N 291 PRO CA CB sing N N 292 PRO CA HA sing N N 293 PRO C O doub N N 294 PRO C OXT sing N N 295 PRO CB CG sing N N 296 PRO CB HB2 sing N N 297 PRO CB HB3 sing N N 298 PRO CG CD sing N N 299 PRO CG HG2 sing N N 300 PRO CG HG3 sing N N 301 PRO CD HD2 sing N N 302 PRO CD HD3 sing N N 303 PRO OXT HXT sing N N 304 SER N CA sing N N 305 SER N H sing N N 306 SER N H2 sing N N 307 SER CA C sing N N 308 SER CA CB sing N N 309 SER CA HA sing N N 310 SER C O doub N N 311 SER C OXT sing N N 312 SER CB OG sing N N 313 SER CB HB2 sing N N 314 SER CB HB3 sing N N 315 SER OG HG sing N N 316 SER OXT HXT sing N N 317 THR N CA sing N N 318 THR N H sing N N 319 THR N H2 sing N N 320 THR CA C sing N N 321 THR CA CB sing N N 322 THR CA HA sing N N 323 THR C O doub N N 324 THR C OXT sing N N 325 THR CB OG1 sing N N 326 THR CB CG2 sing N N 327 THR CB HB sing N N 328 THR OG1 HG1 sing N N 329 THR CG2 HG21 sing N N 330 THR CG2 HG22 sing N N 331 THR CG2 HG23 sing N N 332 THR OXT HXT sing N N 333 TRP N CA sing N N 334 TRP N H sing N N 335 TRP N H2 sing N N 336 TRP CA C sing N N 337 TRP CA CB sing N N 338 TRP CA HA sing N N 339 TRP C O doub N N 340 TRP C OXT sing N N 341 TRP CB CG sing N N 342 TRP CB HB2 sing N N 343 TRP CB HB3 sing N N 344 TRP CG CD1 doub Y N 345 TRP CG CD2 sing Y N 346 TRP CD1 NE1 sing Y N 347 TRP CD1 HD1 sing N N 348 TRP CD2 CE2 doub Y N 349 TRP CD2 CE3 sing Y N 350 TRP NE1 CE2 sing Y N 351 TRP NE1 HE1 sing N N 352 TRP CE2 CZ2 sing Y N 353 TRP CE3 CZ3 doub Y N 354 TRP CE3 HE3 sing N N 355 TRP CZ2 CH2 doub Y N 356 TRP CZ2 HZ2 sing N N 357 TRP CZ3 CH2 sing Y N 358 TRP CZ3 HZ3 sing N N 359 TRP CH2 HH2 sing N N 360 TRP OXT HXT sing N N 361 TYR N CA sing N N 362 TYR N H sing N N 363 TYR N H2 sing N N 364 TYR CA C sing N N 365 TYR CA CB sing N N 366 TYR CA HA sing N N 367 TYR C O doub N N 368 TYR C OXT sing N N 369 TYR CB CG sing N N 370 TYR CB HB2 sing N N 371 TYR CB HB3 sing N N 372 TYR CG CD1 doub Y N 373 TYR CG CD2 sing Y N 374 TYR CD1 CE1 sing Y N 375 TYR CD1 HD1 sing N N 376 TYR CD2 CE2 doub Y N 377 TYR CD2 HD2 sing N N 378 TYR CE1 CZ doub Y N 379 TYR CE1 HE1 sing N N 380 TYR CE2 CZ sing Y N 381 TYR CE2 HE2 sing N N 382 TYR CZ OH sing N N 383 TYR OH HH sing N N 384 TYR OXT HXT sing N N 385 URC N1 C2 sing Y N 386 URC N1 C6 sing Y N 387 URC N1 HN1 sing N N 388 URC C2 N3 sing Y N 389 URC C2 O11 doub N N 390 URC C6 C5 sing Y N 391 URC C6 O13 doub N N 392 URC N3 C4 sing Y N 393 URC N3 HN3 sing N N 394 URC C4 C5 doub Y N 395 URC C4 N9 sing Y N 396 URC C5 N7 sing Y N 397 URC N9 C8 sing Y N 398 URC N9 HN9 sing N N 399 URC N7 C8 sing Y N 400 URC N7 HN7 sing N N 401 URC C8 O24 doub N N 402 VAL N CA sing N N 403 VAL N H sing N N 404 VAL N H2 sing N N 405 VAL CA C sing N N 406 VAL CA CB sing N N 407 VAL CA HA sing N N 408 VAL C O doub N N 409 VAL C OXT sing N N 410 VAL CB CG1 sing N N 411 VAL CB CG2 sing N N 412 VAL CB HB sing N N 413 VAL CG1 HG11 sing N N 414 VAL CG1 HG12 sing N N 415 VAL CG1 HG13 sing N N 416 VAL CG2 HG21 sing N N 417 VAL CG2 HG22 sing N N 418 VAL CG2 HG23 sing N N 419 VAL OXT HXT sing N N 420 # _em_admin.current_status REL _em_admin.deposition_date 2024-06-14 _em_admin.deposition_site PDBJ _em_admin.entry_id 8ZXM _em_admin.last_update 2025-04-16 _em_admin.map_release_date 2025-04-16 _em_admin.title 'Cryo-EM structure of human GLUT9 bound to urate' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units KILODALTONS/NANOMETER _em_entity_assembly_molwt.value 60 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_entity_assembly_recombinant.cell ? _em_entity_assembly_recombinant.entity_assembly_id 1 _em_entity_assembly_recombinant.id 2 _em_entity_assembly_recombinant.ncbi_tax_id 9606 _em_entity_assembly_recombinant.organism 'Homo sapiens' _em_entity_assembly_recombinant.plasmid ? _em_entity_assembly_recombinant.strain ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 51 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? ? ? OTHER ? 9 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Japan Society for the Promotion of Science (JSPS)' Japan 24K18064 1 'Japan Society for the Promotion of Science (JSPS)' Japan 23K27132 2 'Japan Society for the Promotion of Science (JSPS)' Japan 24H02264 3 'Japan Science and Technology' Japan JPMJPR21EF 4 'Japan Society for the Promotion of Science (JSPS)' Japan 21K15031 5 'Japan Society for the Promotion of Science (JSPS)' Japan 20H03216 6 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n # _atom_sites.entry_id 8ZXM _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #