data_8ZZ4 # _entry.id 8ZZ4 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.27 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.399 # # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000004 PDBDEV_00000004 ? PDB 8ZZ4 pdb_00008zz4 10.2210/pdb8zz4/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 8ZZ4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2017-09-08 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-10-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI 1 'Characterizing Protein Dynamics with Integrative Use of Bulk and Single-Molecule Techniques' Biochemistry 57 305 313 2018 28945353 10.1021/acs.biochem.7b00817 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 'Liu, Z.' 1 1 'Gong, Z.' 2 1 'Cao, Y.' 3 1 'Ding, Y.H.' 4 1 'Dong, M.Q.' 5 1 'Lu, Y.B.' 6 1 'Zhang, W.P.' 7 1 'Tang, C.' 8 # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Z.' 1 'Gong, Z.' 2 'Cao, Y.' 3 'Ding, Y.H.' 4 'Dong, M.Q.' 5 'Lu, Y.B.' 6 'Zhang, W.P.' 7 'Tang, C.' 8 # _struct.entry_id 8ZZ4 _struct.title 'Structure of K63-linked Diubiquitin' _struct.pdbx_descriptor 'DIUBIQUITIN' _struct.pdbx_model_details ? _struct.pdbx_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? _struct.pdbx_structure_determination_methodology integrative # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description Ubiquitin _entity.formula_weight 8567.827 _entity.pdbx_number_of_molecules 2 _entity.details 'Ubiquitin' # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.details 1 1 UNP UBC_HUMAN P0CG48 1 . 'Polyubiquitin-C Homo sapiens (Human)' # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end 1 1 1 76 1 76 # _entity_name_com.entity_id 1 _entity_name_com.name Ubiquitin # _entity_name_sys.entity_id 1 _entity_name_sys.name Ubiquitin # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ; _entity_poly.pdbx_seq_one_letter_code_can ;MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG ; _entity_poly.pdbx_strand_id A,B # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 SER n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 ASN n 1 26 VAL n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 ILE n 1 31 GLN n 1 32 ASP n 1 33 LYS n 1 34 GLU n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 PRO n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 ARG n 1 43 LEU n 1 44 ILE n 1 45 PHE n 1 46 ALA n 1 47 GLY n 1 48 LYS n 1 49 GLN n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 THR n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 ASN n 1 61 ILE n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 SER n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 LEU n 1 70 VAL n 1 71 LEU n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 GLY n 1 76 GLY n # loop_ _struct_asym.id _struct_asym.entity_id _struct_asym.details A 1 Ubiquitin B 1 Ubiquitin # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLY 76 76 76 GLY GLY A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 ASN 25 25 25 ASN ASN B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 PRO 37 37 37 PRO PRO B . n B 1 38 PRO 38 38 38 PRO PRO B . n B 1 39 ASP 39 39 39 ASP ASP B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 PHE 45 45 45 PHE PHE B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 GLN 49 49 49 GLN GLN B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 THR 55 55 55 THR THR B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASN 60 60 60 ASN ASN B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 GLN 62 62 62 GLN GLN B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 THR 66 66 66 THR THR B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 HIS 68 68 68 HIS HIS B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 GLY 76 76 76 GLY GLY B . n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'L-peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _atom_type.symbol C H N O S # loop_ _ihm_entity_poly_segment.id _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end 1 1 1 76 MET GLY # # loop_ _ihm_struct_assembly.id _ihm_struct_assembly.name _ihm_struct_assembly.description 1 'Complete assembly' ;Characterization of K63-linked diubiquitin using chemical crosslinking coupled with mass spectrometry (CXMS), small-angle X-ray scattering (SAXS), and smFRET techniques. ; # # loop_ _ihm_struct_assembly_details.id _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.parent_assembly_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_poly_segment_id 1 1 1 Ubiquitin 1 A 1 2 1 1 Ubiquitin 1 B 1 # # loop_ _ihm_external_reference_info.reference_id _ihm_external_reference_info.reference_provider _ihm_external_reference_info.reference_type _ihm_external_reference_info.reference _ihm_external_reference_info.refers_to _ihm_external_reference_info.associated_url 1 Zenodo DOI 10.5281/zenodo.1006721 File https://zenodo.org/record/1006721/files/CXMS_restraints.tbl 2 Zenodo DOI 10.5281/zenodo.1006721 File https://zenodo.org/record/1006721/files/smFRET_restraints.tbl # # loop_ _ihm_external_files.id _ihm_external_files.reference_id _ihm_external_files.file_path _ihm_external_files.content_type _ihm_external_files.file_size_bytes _ihm_external_files.details 1 1 . 'Input data or restraints' . 'Crosslinking restraints' 2 2 . 'Input data or restraints' . 'Single molecule FRET data' # # loop_ _ihm_dataset_list.id _ihm_dataset_list.data_type _ihm_dataset_list.database_hosted _ihm_dataset_list.details 1 'SAS data' YES . 2 'Experimental model' YES . 3 'Experimental model' YES . 4 'Crosslinking-MS data' NO . 5 'Single molecule FRET data' NO . # # loop_ _ihm_dataset_group.id _ihm_dataset_group.name _ihm_dataset_group.application _ihm_dataset_group.details 1 . . . 2 . . . 3 . . . 4 . . . 5 . . . # # loop_ _ihm_dataset_group_link.group_id _ihm_dataset_group_link.dataset_list_id 1 1 2 2 3 3 4 4 5 5 # # loop_ _ihm_dataset_external_reference.id _ihm_dataset_external_reference.dataset_list_id _ihm_dataset_external_reference.file_id 1 4 1 2 5 2 # # loop_ _ihm_dataset_related_db_reference.id _ihm_dataset_related_db_reference.dataset_list_id _ihm_dataset_related_db_reference.db_name _ihm_dataset_related_db_reference.accession_code _ihm_dataset_related_db_reference.version _ihm_dataset_related_db_reference.details 1 1 SASBDB SASDCG7 . 'Lys63-linked Diubiquitin at pH7.4' 2 2 PDB 1UBQ . 'STRUCTURE OF UBIQUITIN REFINED AT 1.8 ANGSTROMS RESOLUTION' 3 3 PDB 2N2K . 'Ensemble structure of the closed state of Lys63-linked Diubiquitin in the absence of a ligand' # # loop_ _ihm_model_representation.id _ihm_model_representation.name _ihm_model_representation.details 1 . . # # loop_ _ihm_model_representation_details.id _ihm_model_representation_details.representation_id _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.starting_model_id _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_object_count 1 1 1 Ubiquitin A 1 atomistic 1 flexible by-atom . 2 1 1 Ubiquitin B 1 atomistic 2 flexible by-atom . # # loop_ _ihm_starting_model_details.starting_model_id _ihm_starting_model_details.entity_id _ihm_starting_model_details.entity_description _ihm_starting_model_details.asym_id _ihm_starting_model_details.entity_poly_segment_id _ihm_starting_model_details.starting_model_source _ihm_starting_model_details.starting_model_auth_asym_id _ihm_starting_model_details.starting_model_sequence_offset _ihm_starting_model_details.dataset_list_id 1 1 Ubiquitin A 1 'experimental model' A 0 2 2 1 Ubiquitin B 1 'experimental model' A 0 2 # # loop_ _ihm_modeling_protocol.id _ihm_modeling_protocol.protocol_name _ihm_modeling_protocol.num_steps 1 'Integrative Modeling' 1 # # loop_ _ihm_modeling_protocol_details.id _ihm_modeling_protocol_details.protocol_id _ihm_modeling_protocol_details.step_id _ihm_modeling_protocol_details.struct_assembly_id _ihm_modeling_protocol_details.dataset_group_id _ihm_modeling_protocol_details.struct_assembly_description _ihm_modeling_protocol_details.step_name _ihm_modeling_protocol_details.step_method _ihm_modeling_protocol_details.num_models_begin _ihm_modeling_protocol_details.num_models_end _ihm_modeling_protocol_details.multi_scale_flag _ihm_modeling_protocol_details.multi_state_flag _ihm_modeling_protocol_details.ordered_flag _ihm_modeling_protocol_details.software_id _ihm_modeling_protocol_details.script_file_id 1 1 1 1 1 'All known components' . . . . NO YES NO . . # # loop_ _ihm_cross_link_list.id _ihm_cross_link_list.group_id _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.seq_id_2 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.linker_type _ihm_cross_link_list.dataset_list_id 1 1 Ubiquitin 1 29 LYS Ubiquitin 1 33 LYS EGS 4 2 1 Ubiquitin 1 33 LYS Ubiquitin 1 29 LYS EGS 4 3 1 Ubiquitin 1 33 LYS Ubiquitin 1 33 LYS EGS 4 4 2 Ubiquitin 1 6 LYS Ubiquitin 1 33 LYS BS3 4 5 2 Ubiquitin 1 48 LYS Ubiquitin 1 33 LYS BS3 4 6 3 Ubiquitin 1 6 LYS Ubiquitin 1 48 LYS BS2G 4 7 3 Ubiquitin 1 48 LYS Ubiquitin 1 29 LYS BS2G 4 8 4 Ubiquitin 1 48 LYS Ubiquitin 1 6 LYS DST 4 # # loop_ _ihm_cross_link_restraint.id _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 1 1 1 A 29 LYS 1 B 33 LYS CB CB 'upper bound' . by-atom 15.600 . . . 2 2 1 A 33 LYS 1 B 29 LYS CB CB 'upper bound' . by-atom 15.600 . . . 3 1 1 A 29 LYS 1 B 33 LYS CA CA 'upper bound' . by-atom 18.300 . . . 4 3 1 A 33 LYS 1 B 33 LYS CB CB 'upper bound' . by-atom 15.600 . . . 5 2 1 A 33 LYS 1 B 29 LYS CA CA 'upper bound' . by-atom 18.300 . . . 6 3 1 A 33 LYS 1 B 33 LYS CA CA 'upper bound' . by-atom 18.300 . . . 7 5 1 A 48 LYS 1 B 33 LYS CA CA 'upper bound' . by-atom 14.000 . . . 8 4 1 A 6 LYS 1 B 33 LYS CB CB 'upper bound' . by-atom 11.200 . . . 9 5 1 A 48 LYS 1 B 33 LYS CB CB 'upper bound' . by-atom 11.200 . . . 10 4 1 A 6 LYS 1 B 33 LYS CA CA 'upper bound' . by-atom 14.000 . . . 11 6 1 A 6 LYS 1 B 48 LYS CB CB 'upper bound' . by-atom 7.400 . . . 12 7 1 A 48 LYS 1 B 29 LYS CA CA 'upper bound' . by-atom 10.300 . . . 13 6 1 A 6 LYS 1 B 48 LYS CA CA 'upper bound' . by-atom 10.300 . . . 14 8 1 A 48 LYS 1 B 6 LYS CA CA 'upper bound' . by-atom 8.700 . . . # # loop_ _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.assembly_id _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 'Model 1' 1 1 1 2 'Model 2' 1 1 1 3 'Model 3' 1 1 1 # # loop_ _ihm_model_group.id _ihm_model_group.name _ihm_model_group.details 1 . . 2 . . 3 . . # # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 2 2 3 3 # # loop_ _ihm_multi_state_modeling.state_id _ihm_multi_state_modeling.state_group_id _ihm_multi_state_modeling.population_fraction _ihm_multi_state_modeling.state_type _ihm_multi_state_modeling.state_name _ihm_multi_state_modeling.experiment_type _ihm_multi_state_modeling.details 1 1 0.670 'conformational change' 'conformational state 1' 'Single molecule' . 2 2 0.230 'conformational change' 'conformational state 2' 'Single molecule' . 3 3 0.100 'conformational change' 'conformational state 3' 'Single molecule' . # # loop_ _ihm_multi_state_model_group_link.state_id _ihm_multi_state_model_group_link.model_group_id 1 1 2 2 3 3 # # loop_ #