HEADER CELL CYCLE 27-MAY-22 8A0J TITLE CRYSTAL STRUCTURE OF THE KINETOPLASTID KINETOCHORE PROTEIN TRYPANOSOMA TITLE 2 CONGOLENSE KKT2 DIVERGENT POLO-BOX DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN TCIL3000_11_11110; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA CONGOLENSE IL3000; SOURCE 3 ORGANISM_TAXID: 1068625; SOURCE 4 STRAIN: IL3000; SOURCE 5 GENE: TCIL3000_11_11110; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PRSFDUET-1 KEYWDS KINETOCHORE, POLO-BOX, KINETOPLASTID, KKT2, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR M.ISHII,P.LUDZIA,G.MARCIANO,W.ALLEN,O.NERUSHEVA,B.AKIYOSHI REVDAT 4 01-MAY-24 8A0J 1 REMARK REVDAT 3 30-NOV-22 8A0J 1 JRNL REVDAT 2 05-OCT-22 8A0J 1 JRNL REVDAT 1 15-JUN-22 8A0J 0 JRNL AUTH M.ISHII,P.LUDZIA,G.MARCIANO,W.ALLEN,O.O.NERUSHEVA,B.AKIYOSHI JRNL TITL DIVERGENT POLO BOXES IN KKT2 BIND KKT1 TO INITIATE THE JRNL TITL 2 KINETOCHORE ASSEMBLY CASCADE IN TRYPANOSOMA BRUCEI. JRNL REF MOL.BIOL.CELL V. 33 AR143 2022 JRNL REFN ESSN 1939-4586 JRNL PMID 36129769 JRNL DOI 10.1091/MBC.E22-07-0269-T REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.ISHII,P.LUDZIA,G.MARCIANO,W.ALLEN,O.O.NERUSHEVA,B.AKIYOSHI REMARK 1 TITL DIVERGENT POLO BOXES IN KKT2 AND KKT3 INITIATE THE REMARK 1 TITL 2 KINETOCHORE ASSEMBLY CASCADE IN TRYPANOSOMA BRUCEI REMARK 1 REF BIORXIV 2022 REMARK 1 REFN ISSN 2692-8205 REMARK 1 DOI 10.1101/2022.06.02.494600 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.18.2_3874 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 23300 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.2400 - 4.4000 1.00 2824 158 0.1764 0.2069 REMARK 3 2 4.4000 - 3.4900 1.00 2795 145 0.1664 0.2395 REMARK 3 3 3.4900 - 3.0500 1.00 2778 139 0.1961 0.2697 REMARK 3 4 3.0500 - 2.7700 1.00 2796 127 0.2100 0.2690 REMARK 3 5 2.7700 - 2.5700 1.00 2745 131 0.2111 0.2559 REMARK 3 6 2.5700 - 2.4200 1.00 2755 155 0.2245 0.2527 REMARK 3 7 2.4200 - 2.3000 1.00 2748 129 0.2217 0.2835 REMARK 3 8 2.3000 - 2.2000 1.00 2721 154 0.2695 0.2968 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.900 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1039 THROUGH 1065 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.0932 -5.2506 9.8360 REMARK 3 T TENSOR REMARK 3 T11: 0.3415 T22: 0.1610 REMARK 3 T33: 0.2023 T12: -0.0065 REMARK 3 T13: -0.0355 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 4.6421 L22: 4.5564 REMARK 3 L33: 4.4478 L12: -0.3480 REMARK 3 L13: -0.6477 L23: 0.0502 REMARK 3 S TENSOR REMARK 3 S11: 0.4812 S12: -0.3260 S13: 0.2291 REMARK 3 S21: 0.1221 S22: -0.0631 S23: 0.2195 REMARK 3 S31: -0.2633 S32: -0.2872 S33: -0.2010 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1066 THROUGH 1159 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.5782 6.8186 7.0200 REMARK 3 T TENSOR REMARK 3 T11: 0.2810 T22: 0.2067 REMARK 3 T33: 0.2885 T12: -0.0266 REMARK 3 T13: -0.0022 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.3817 L22: 3.4979 REMARK 3 L33: 2.1198 L12: -0.0613 REMARK 3 L13: 0.2408 L23: -0.3446 REMARK 3 S TENSOR REMARK 3 S11: -0.0015 S12: -0.1069 S13: 0.0407 REMARK 3 S21: 0.1669 S22: -0.0512 S23: -0.1404 REMARK 3 S31: -0.1712 S32: 0.1104 S33: 0.0353 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1160 THROUGH 1222 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.5016 -5.8395 9.5352 REMARK 3 T TENSOR REMARK 3 T11: 0.2814 T22: 0.1779 REMARK 3 T33: 0.2542 T12: 0.0305 REMARK 3 T13: -0.0184 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.9687 L22: 2.1988 REMARK 3 L33: 2.9137 L12: 0.7656 REMARK 3 L13: -0.5739 L23: 0.9782 REMARK 3 S TENSOR REMARK 3 S11: -0.0821 S12: -0.0305 S13: 0.0097 REMARK 3 S21: -0.1264 S22: -0.0417 S23: 0.1799 REMARK 3 S31: -0.0399 S32: -0.1004 S33: 0.0992 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1223 THROUGH 1261 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9136 -13.4504 20.9132 REMARK 3 T TENSOR REMARK 3 T11: 0.3892 T22: 0.2305 REMARK 3 T33: 0.2250 T12: 0.0130 REMARK 3 T13: 0.0614 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 3.9956 L22: 2.2802 REMARK 3 L33: 4.1066 L12: -0.0113 REMARK 3 L13: 1.6705 L23: -1.1901 REMARK 3 S TENSOR REMARK 3 S11: 0.2156 S12: -0.5000 S13: -0.0792 REMARK 3 S21: 0.3983 S22: -0.1021 S23: 0.0704 REMARK 3 S31: 0.1454 S32: 0.0229 S33: -0.0642 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1046 THROUGH 1065 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.4820 20.5900 36.3996 REMARK 3 T TENSOR REMARK 3 T11: 0.2072 T22: 0.4164 REMARK 3 T33: 0.2710 T12: 0.0040 REMARK 3 T13: 0.0035 T23: -0.0414 REMARK 3 L TENSOR REMARK 3 L11: 2.4395 L22: 4.3675 REMARK 3 L33: 4.6988 L12: -0.4619 REMARK 3 L13: -0.7672 L23: 0.5303 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.0099 S13: 0.2877 REMARK 3 S21: 0.0672 S22: -0.5038 S23: 0.2492 REMARK 3 S31: 0.7353 S32: -0.6541 S33: 0.3968 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1066 THROUGH 1127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4832 10.4910 37.6775 REMARK 3 T TENSOR REMARK 3 T11: 0.2452 T22: 0.3275 REMARK 3 T33: 0.2429 T12: 0.0299 REMARK 3 T13: -0.0126 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 2.3315 L22: 3.3375 REMARK 3 L33: 4.5153 L12: 0.4328 REMARK 3 L13: -1.5244 L23: 0.9699 REMARK 3 S TENSOR REMARK 3 S11: 0.0509 S12: -0.0406 S13: -0.3490 REMARK 3 S21: -0.0376 S22: -0.1553 S23: -0.1982 REMARK 3 S31: 0.3755 S32: 0.2734 S33: 0.0797 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1128 THROUGH 1158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -24.1305 9.2580 49.6350 REMARK 3 T TENSOR REMARK 3 T11: 0.5360 T22: 0.3366 REMARK 3 T33: 0.3143 T12: -0.0556 REMARK 3 T13: 0.0457 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 1.9990 L22: 2.6662 REMARK 3 L33: 2.9122 L12: -0.7081 REMARK 3 L13: 0.4625 L23: 0.2012 REMARK 3 S TENSOR REMARK 3 S11: -0.1732 S12: -0.0688 S13: -0.3423 REMARK 3 S21: 0.4604 S22: 0.1191 S23: 0.1991 REMARK 3 S31: 0.4241 S32: -0.1540 S33: 0.1142 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1159 THROUGH 1222 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.9988 21.9555 34.6841 REMARK 3 T TENSOR REMARK 3 T11: 0.2530 T22: 0.3665 REMARK 3 T33: 0.2148 T12: 0.0323 REMARK 3 T13: 0.0174 T23: -0.0215 REMARK 3 L TENSOR REMARK 3 L11: 1.8650 L22: 3.1633 REMARK 3 L33: 2.3291 L12: -0.5996 REMARK 3 L13: -0.6111 L23: -0.0381 REMARK 3 S TENSOR REMARK 3 S11: 0.1414 S12: 0.2211 S13: 0.0185 REMARK 3 S21: -0.1413 S22: -0.1595 S23: 0.1769 REMARK 3 S31: -0.2068 S32: -0.2521 S33: 0.0368 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1223 THROUGH 1244 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1635 26.2194 22.1809 REMARK 3 T TENSOR REMARK 3 T11: 0.5459 T22: 0.6807 REMARK 3 T33: 0.2911 T12: 0.1086 REMARK 3 T13: 0.0074 T23: 0.0508 REMARK 3 L TENSOR REMARK 3 L11: 2.8012 L22: 3.9183 REMARK 3 L33: 1.6463 L12: -0.5342 REMARK 3 L13: 0.0656 L23: -0.1125 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: 0.6962 S13: 0.0729 REMARK 3 S21: -0.8422 S22: -0.1172 S23: -0.0544 REMARK 3 S31: 0.0354 S32: -0.0776 S33: 0.1218 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1245 THROUGH 1262 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7691 35.0550 29.8238 REMARK 3 T TENSOR REMARK 3 T11: 0.4529 T22: 0.3318 REMARK 3 T33: 0.3492 T12: -0.0524 REMARK 3 T13: 0.1275 T23: 0.0730 REMARK 3 L TENSOR REMARK 3 L11: 4.5909 L22: 4.2744 REMARK 3 L33: 6.4396 L12: -0.5557 REMARK 3 L13: 1.5264 L23: -0.8658 REMARK 3 S TENSOR REMARK 3 S11: -0.0541 S12: 0.3141 S13: 1.3957 REMARK 3 S21: 0.2084 S22: -0.3773 S23: -0.3163 REMARK 3 S31: -1.1336 S32: 0.2407 S33: 0.3285 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8A0J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1292123399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS FEB 5, 2021 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33539 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.921 REMARK 200 RESOLUTION RANGE LOW (A) : 48.260 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 200 DATA REDUNDANCY : 6.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.0, 8% W/V POLYVINYL REMARK 280 ALCOHOL, 10% V/V 1-PROPANOL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 28.56650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 1030 REMARK 465 ALA A 1031 REMARK 465 PHE A 1032 REMARK 465 LEU A 1033 REMARK 465 ALA A 1034 REMARK 465 LEU A 1035 REMARK 465 PRO A 1036 REMARK 465 ARG A 1037 REMARK 465 GLY A 1038 REMARK 465 ASN A 1262 REMARK 465 PHE A 1263 REMARK 465 ARG A 1264 REMARK 465 ARG A 1265 REMARK 465 LYS B 1030 REMARK 465 ALA B 1031 REMARK 465 PHE B 1032 REMARK 465 LEU B 1033 REMARK 465 ALA B 1034 REMARK 465 LEU B 1035 REMARK 465 PRO B 1036 REMARK 465 ARG B 1037 REMARK 465 GLY B 1038 REMARK 465 GLU B 1039 REMARK 465 GLU B 1040 REMARK 465 GLN B 1041 REMARK 465 ARG B 1042 REMARK 465 MET B 1043 REMARK 465 ARG B 1044 REMARK 465 PHE B 1045 REMARK 465 PHE B 1263 REMARK 465 ARG B 1264 REMARK 465 ARG B 1265 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A1039 CG CD OE1 OE2 REMARK 470 GLU A1040 CG CD OE1 OE2 REMARK 470 GLN A1041 CG CD OE1 NE2 REMARK 470 ARG A1044 CG CD NE CZ NH1 NH2 REMARK 470 ARG A1174 CG CD NE CZ NH1 NH2 REMARK 470 ASP B1064 CG OD1 OD2 REMARK 470 ARG B1174 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE ARG B 1203 O HOH B 1301 1.94 REMARK 500 O HOH B 1359 O HOH B 1376 2.03 REMARK 500 NH1 ARG B 1260 O HOH B 1302 2.06 REMARK 500 OD1 ASN B 1111 O HOH B 1303 2.08 REMARK 500 O HOH A 1383 O HOH A 1385 2.09 REMARK 500 O HOH B 1333 O HOH B 1368 2.16 REMARK 500 O HOH B 1368 O HOH B 1372 2.16 REMARK 500 O ASP B 1047 OG SER B 1051 2.16 REMARK 500 OD2 ASP A 1134 O HOH A 1301 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1180 157.22 -44.48 REMARK 500 ASP A1224 -169.45 -113.74 REMARK 500 THR A1245 -66.88 -102.86 REMARK 500 ASP B1063 120.63 -39.71 REMARK 500 VAL B1065 -61.90 -101.54 REMARK 500 ASN B1111 59.49 -99.37 REMARK 500 THR B1245 -60.46 -103.37 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1408 DISTANCE = 6.70 ANGSTROMS DBREF 8A0J A 1030 1265 UNP G0V1V5 G0V1V5_TRYCI 1030 1265 DBREF 8A0J B 1030 1265 UNP G0V1V5 G0V1V5_TRYCI 1030 1265 SEQRES 1 A 236 LYS ALA PHE LEU ALA LEU PRO ARG GLY GLU GLU GLN ARG SEQRES 2 A 236 MET ARG PHE VAL ASP GLU PHE LEU SER GLY ALA TRP VAL SEQRES 3 A 236 ARG PHE TYR SER PHE THR THR ASP ASP VAL VAL ALA MET SEQRES 4 A 236 TYR TYR SER LEU GLN PRO GLY ARG TYR GLY ALA PHE PHE SEQRES 5 A 236 ALA THR GLU GLN GLY VAL GLY THR ALA VAL VAL ASP VAL SEQRES 6 A 236 HIS SER LYS LEU VAL LEU TYR VAL PRO CYS MET ASP LYS SEQRES 7 A 236 ASP SER MET ASN ARG ILE GLN PRO HIS PRO HIS VAL LEU SEQRES 8 A 236 THR TYR PHE GLU GLU ASP VAL GLN LEU LEU ASN ILE SER SEQRES 9 A 236 ASP ALA GLN LYS VAL LEU GLY SER VAL LEU THR GLY ILE SEQRES 10 A 236 MET ASN PHE VAL GLN GLU ILE ALA ARG GLN ARG GLY GLU SEQRES 11 A 236 GLY LEU PRO PRO PRO ALA VAL HIS ALA ALA TYR LEU HIS SEQRES 12 A 236 GLU ARG ASP LYS THR ALA VAL PRO SER ASN THR LYS PHE SEQRES 13 A 236 ALA TYR VAL ARG LYS VAL PHE PRO ASP PRO SER GLY SER SEQRES 14 A 236 PHE VAL LEU PHE ARG LEU SER ASN LEU ARG SER GLN VAL SEQRES 15 A 236 ILE CYS ASN VAL LEU MET ASP ILE ARG TRP GLN SER ASP SEQRES 16 A 236 ARG GLN ASN ASN VAL GLY GLN ARG TYR TYR VAL LEU ALA SEQRES 17 A 236 ASP GLY THR ALA GLU PRO PHE THR VAL ASP HIS THR GLY SEQRES 18 A 236 ILE LEU PHE GLU VAL ASP GLN VAL VAL ARG ASN ASN PHE SEQRES 19 A 236 ARG ARG SEQRES 1 B 236 LYS ALA PHE LEU ALA LEU PRO ARG GLY GLU GLU GLN ARG SEQRES 2 B 236 MET ARG PHE VAL ASP GLU PHE LEU SER GLY ALA TRP VAL SEQRES 3 B 236 ARG PHE TYR SER PHE THR THR ASP ASP VAL VAL ALA MET SEQRES 4 B 236 TYR TYR SER LEU GLN PRO GLY ARG TYR GLY ALA PHE PHE SEQRES 5 B 236 ALA THR GLU GLN GLY VAL GLY THR ALA VAL VAL ASP VAL SEQRES 6 B 236 HIS SER LYS LEU VAL LEU TYR VAL PRO CYS MET ASP LYS SEQRES 7 B 236 ASP SER MET ASN ARG ILE GLN PRO HIS PRO HIS VAL LEU SEQRES 8 B 236 THR TYR PHE GLU GLU ASP VAL GLN LEU LEU ASN ILE SER SEQRES 9 B 236 ASP ALA GLN LYS VAL LEU GLY SER VAL LEU THR GLY ILE SEQRES 10 B 236 MET ASN PHE VAL GLN GLU ILE ALA ARG GLN ARG GLY GLU SEQRES 11 B 236 GLY LEU PRO PRO PRO ALA VAL HIS ALA ALA TYR LEU HIS SEQRES 12 B 236 GLU ARG ASP LYS THR ALA VAL PRO SER ASN THR LYS PHE SEQRES 13 B 236 ALA TYR VAL ARG LYS VAL PHE PRO ASP PRO SER GLY SER SEQRES 14 B 236 PHE VAL LEU PHE ARG LEU SER ASN LEU ARG SER GLN VAL SEQRES 15 B 236 ILE CYS ASN VAL LEU MET ASP ILE ARG TRP GLN SER ASP SEQRES 16 B 236 ARG GLN ASN ASN VAL GLY GLN ARG TYR TYR VAL LEU ALA SEQRES 17 B 236 ASP GLY THR ALA GLU PRO PHE THR VAL ASP HIS THR GLY SEQRES 18 B 236 ILE LEU PHE GLU VAL ASP GLN VAL VAL ARG ASN ASN PHE SEQRES 19 B 236 ARG ARG FORMUL 3 HOH *185(H2 O) HELIX 1 AA1 GLU A 1039 SER A 1051 1 13 HELIX 2 AA2 ILE A 1132 GLY A 1140 1 9 HELIX 3 AA3 GLY A 1140 GLU A 1159 1 20 HELIX 4 AA4 GLY A 1250 ASN A 1261 1 12 HELIX 5 AA5 ILE B 1132 GLY B 1140 1 9 HELIX 6 AA6 GLY B 1140 GLU B 1159 1 20 HELIX 7 AA7 GLY B 1250 ASN B 1261 1 12 SHEET 1 AA1 7 GLN A1128 ASN A1131 0 SHEET 2 AA1 7 LEU A1098 VAL A1102 -1 N TYR A1101 O GLN A1128 SHEET 3 AA1 7 VAL A1087 ASP A1093 -1 N THR A1089 O VAL A1102 SHEET 4 AA1 7 ARG A1076 ALA A1082 -1 N PHE A1081 O GLY A1088 SHEET 5 AA1 7 VAL A1066 GLN A1073 -1 N TYR A1070 O GLY A1078 SHEET 6 AA1 7 PHE A1057 PHE A1060 -1 N SER A1059 O TYR A1069 SHEET 7 AA1 7 VAL A1166 HIS A1167 -1 O VAL A1166 N TYR A1058 SHEET 1 AA2 6 VAL A1188 PRO A1193 0 SHEET 2 AA2 6 PHE A1199 LEU A1204 -1 O LEU A1201 N PHE A1192 SHEET 3 AA2 6 ARG A1208 CYS A1213 -1 O ILE A1212 N VAL A1200 SHEET 4 AA2 6 MET A1217 SER A1223 -1 O ILE A1219 N VAL A1211 SHEET 5 AA2 6 VAL A1229 LEU A1236 -1 O GLY A1230 N GLN A1222 SHEET 6 AA2 6 ALA A1241 PRO A1243 -1 O GLU A1242 N TYR A1234 SHEET 1 AA3 7 GLN B1128 ASN B1131 0 SHEET 2 AA3 7 LEU B1098 VAL B1102 -1 N TYR B1101 O GLN B1128 SHEET 3 AA3 7 VAL B1087 ASP B1093 -1 N VAL B1091 O LEU B1100 SHEET 4 AA3 7 ARG B1076 ALA B1082 -1 N PHE B1081 O GLY B1088 SHEET 5 AA3 7 VAL B1066 GLN B1073 -1 N MET B1068 O PHE B1080 SHEET 6 AA3 7 PHE B1057 PHE B1060 -1 N SER B1059 O TYR B1069 SHEET 7 AA3 7 VAL B1166 HIS B1167 -1 O VAL B1166 N TYR B1058 SHEET 1 AA4 6 VAL B1188 PRO B1193 0 SHEET 2 AA4 6 PHE B1199 LEU B1204 -1 O LEU B1201 N PHE B1192 SHEET 3 AA4 6 ARG B1208 CYS B1213 -1 O GLN B1210 N PHE B1202 SHEET 4 AA4 6 MET B1217 SER B1223 -1 O ILE B1219 N VAL B1211 SHEET 5 AA4 6 VAL B1229 LEU B1236 -1 O GLY B1230 N GLN B1222 SHEET 6 AA4 6 ALA B1241 PHE B1244 -1 O GLU B1242 N TYR B1234 CRYST1 48.700 57.133 83.671 90.00 97.87 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020534 0.000000 0.002839 0.00000 SCALE2 0.000000 0.017503 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012065 0.00000 MASTER 459 0 0 7 26 0 0 6 3674 2 0 38 END