HEADER HYDROLASE 02-JUN-22 8A25 TITLE LYSOPHOSPHOLIPASE PLAA FROM LEGIONELLA PNEUMOPHILA STR. CORBY - TITLE 2 COMPLEX WITH PEG FRAGMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSOPHOSPHOLIPASE A; COMPND 3 CHAIN: A; COMPND 4 EC: 2.3.1.43; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA STR. CORBY; SOURCE 3 ORGANISM_TAXID: 400673; SOURCE 4 GENE: NCTC12000_02489; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PGP172 PLAACORBY (-SP)* KEYWDS PHOSPHOLIPASE, VIRULENCE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.G.DIWO,W.BLANKENFELDT REVDAT 3 20-MAR-24 8A25 1 JRNL REVDAT 2 03-JAN-24 8A25 1 JRNL REVDAT 1 14-JUN-23 8A25 0 JRNL AUTH M.HILLER,M.DIWO,S.WAMP,T.GUTSMANN,C.LANG,W.BLANKENFELDT, JRNL AUTH 2 A.FLIEGER JRNL TITL STRUCTURE-FUNCTION RELATIONSHIPS UNDERPIN DISULFIDE LOOP JRNL TITL 2 CLEAVAGE-DEPENDENT ACTIVATION OF LEGIONELLA PNEUMOPHILA JRNL TITL 3 LYSOPHOSPHOLIPASE A PLAA. JRNL REF MOL.MICROBIOL. V. 121 497 2024 JRNL REFN ESSN 1365-2958 JRNL PMID 38130174 JRNL DOI 10.1111/MMI.15201 REMARK 2 REMARK 2 RESOLUTION. 1.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20_4459 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 27073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.159 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.850 REMARK 3 FREE R VALUE TEST SET COUNT : 1313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 71.2200 - 3.6000 1.00 3146 143 0.1444 0.1495 REMARK 3 2 3.6000 - 2.8600 1.00 2995 169 0.1539 0.1779 REMARK 3 3 2.8600 - 2.5000 1.00 2960 167 0.1575 0.1884 REMARK 3 4 2.5000 - 2.2700 1.00 2972 149 0.1480 0.2089 REMARK 3 5 2.2700 - 2.1100 0.81 2371 134 0.1598 0.1918 REMARK 3 6 2.1100 - 1.9800 0.83 2466 110 0.1639 0.1953 REMARK 3 7 1.9800 - 1.8800 1.00 2955 146 0.2017 0.2380 REMARK 3 8 1.8800 - 1.8000 1.00 2931 158 0.2146 0.2670 REMARK 3 9 1.8000 - 1.7300 1.00 2964 137 0.2338 0.2828 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.340 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.64 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.0419 2.8238 8.2379 REMARK 3 T TENSOR REMARK 3 T11: 0.2445 T22: 0.1988 REMARK 3 T33: 0.2005 T12: -0.0101 REMARK 3 T13: -0.0200 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 2.8357 L22: 3.1009 REMARK 3 L33: 3.8318 L12: -0.1479 REMARK 3 L13: -0.5847 L23: -0.3497 REMARK 3 S TENSOR REMARK 3 S11: 0.0357 S12: -0.0996 S13: 0.2380 REMARK 3 S21: -0.1702 S22: -0.0477 S23: 0.0573 REMARK 3 S31: -0.2473 S32: 0.3103 S33: -0.0093 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.7783 -9.3080 20.2560 REMARK 3 T TENSOR REMARK 3 T11: 0.2470 T22: 0.2642 REMARK 3 T33: 0.1780 T12: 0.0300 REMARK 3 T13: -0.0236 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 2.2631 L22: 4.3684 REMARK 3 L33: 3.4792 L12: -1.6192 REMARK 3 L13: -0.0999 L23: 1.8446 REMARK 3 S TENSOR REMARK 3 S11: -0.0812 S12: -0.0551 S13: 0.0086 REMARK 3 S21: 0.3366 S22: 0.1122 S23: -0.1614 REMARK 3 S31: 0.3337 S32: 0.4576 S33: -0.0378 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.7735 0.0435 6.4335 REMARK 3 T TENSOR REMARK 3 T11: 0.2460 T22: 0.3268 REMARK 3 T33: 0.2070 T12: -0.0095 REMARK 3 T13: -0.0289 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 1.4188 L22: 3.5557 REMARK 3 L33: 3.2690 L12: -0.5384 REMARK 3 L13: -0.8373 L23: -0.1051 REMARK 3 S TENSOR REMARK 3 S11: 0.0461 S12: 0.0102 S13: 0.1297 REMARK 3 S21: -0.1302 S22: -0.0306 S23: -0.1998 REMARK 3 S31: -0.1741 S32: 0.5674 S33: 0.0035 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 82 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.6011 -3.8073 17.7124 REMARK 3 T TENSOR REMARK 3 T11: 0.3418 T22: 0.3351 REMARK 3 T33: 0.3910 T12: -0.0169 REMARK 3 T13: 0.0814 T23: -0.0950 REMARK 3 L TENSOR REMARK 3 L11: 1.5768 L22: 6.0238 REMARK 3 L33: 6.6734 L12: -2.7970 REMARK 3 L13: 1.1624 L23: 0.3001 REMARK 3 S TENSOR REMARK 3 S11: -0.0581 S12: -0.3465 S13: -0.6577 REMARK 3 S21: 0.6648 S22: -0.2105 S23: 0.9287 REMARK 3 S31: 0.4626 S32: -0.7993 S33: 0.2233 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6473 11.2893 12.0177 REMARK 3 T TENSOR REMARK 3 T11: 0.3138 T22: 0.1815 REMARK 3 T33: 0.2924 T12: 0.0124 REMARK 3 T13: -0.0347 T23: -0.0384 REMARK 3 L TENSOR REMARK 3 L11: 3.1953 L22: 4.1038 REMARK 3 L33: 4.8173 L12: -0.0231 REMARK 3 L13: -1.0396 L23: 0.3184 REMARK 3 S TENSOR REMARK 3 S11: 0.0408 S12: -0.0435 S13: 0.3030 REMARK 3 S21: 0.1531 S22: -0.0418 S23: 0.1721 REMARK 3 S31: -0.7196 S32: 0.0052 S33: -0.0207 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 159 ) REMARK 3 ORIGIN FOR THE GROUP (A): -40.5368 -1.7939 8.8052 REMARK 3 T TENSOR REMARK 3 T11: 0.2140 T22: 0.1956 REMARK 3 T33: 0.2292 T12: 0.0438 REMARK 3 T13: -0.0173 T23: -0.0481 REMARK 3 L TENSOR REMARK 3 L11: 3.3878 L22: 5.2326 REMARK 3 L33: 2.1019 L12: 1.0922 REMARK 3 L13: -0.3400 L23: -0.2165 REMARK 3 S TENSOR REMARK 3 S11: -0.0057 S12: -0.1413 S13: 0.1888 REMARK 3 S21: 0.4712 S22: -0.0034 S23: 0.5250 REMARK 3 S31: 0.0042 S32: -0.2522 S33: -0.0083 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 160 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): -32.8509 -7.8185 3.7263 REMARK 3 T TENSOR REMARK 3 T11: 0.1881 T22: 0.2065 REMARK 3 T33: 0.2214 T12: 0.0347 REMARK 3 T13: -0.0116 T23: -0.0321 REMARK 3 L TENSOR REMARK 3 L11: 1.7698 L22: 8.3594 REMARK 3 L33: 2.2879 L12: 1.9807 REMARK 3 L13: 0.8222 L23: 1.0204 REMARK 3 S TENSOR REMARK 3 S11: -0.0134 S12: 0.0231 S13: -0.0135 REMARK 3 S21: -0.1390 S22: 0.0127 S23: 0.2562 REMARK 3 S31: 0.2013 S32: -0.0721 S33: 0.0261 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 209 ) REMARK 3 ORIGIN FOR THE GROUP (A): -41.2942 -3.5804 -0.8455 REMARK 3 T TENSOR REMARK 3 T11: 0.2347 T22: 0.2268 REMARK 3 T33: 0.3310 T12: 0.0309 REMARK 3 T13: -0.1147 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 2.2954 L22: 5.4547 REMARK 3 L33: 2.7200 L12: -0.5980 REMARK 3 L13: 0.8962 L23: -0.6440 REMARK 3 S TENSOR REMARK 3 S11: -0.1849 S12: 0.2231 S13: 0.4729 REMARK 3 S21: -0.3543 S22: 0.0235 S23: 0.8018 REMARK 3 S31: -0.1498 S32: -0.3080 S33: -0.0630 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 210 THROUGH 234 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.6957 -4.8573 -5.8832 REMARK 3 T TENSOR REMARK 3 T11: 0.3199 T22: 0.2048 REMARK 3 T33: 0.1954 T12: 0.0050 REMARK 3 T13: -0.0295 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 2.2277 L22: 6.2701 REMARK 3 L33: 1.6435 L12: -1.2604 REMARK 3 L13: 0.7367 L23: -0.1147 REMARK 3 S TENSOR REMARK 3 S11: -0.0332 S12: 0.3034 S13: -0.0118 REMARK 3 S21: -0.4920 S22: -0.0958 S23: 0.4796 REMARK 3 S31: 0.0386 S32: 0.0483 S33: 0.1105 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 235 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2501 -22.4113 10.7582 REMARK 3 T TENSOR REMARK 3 T11: 0.4565 T22: 0.2130 REMARK 3 T33: 0.3409 T12: 0.0584 REMARK 3 T13: -0.0682 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 3.0005 L22: 4.7376 REMARK 3 L33: 1.4954 L12: -0.3617 REMARK 3 L13: 0.1049 L23: 0.4913 REMARK 3 S TENSOR REMARK 3 S11: 0.0921 S12: -0.4161 S13: -0.2525 REMARK 3 S21: -0.0864 S22: 0.1105 S23: 0.4904 REMARK 3 S31: 0.9604 S32: 0.2258 S33: -0.0608 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 256 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6265 -19.7618 12.0422 REMARK 3 T TENSOR REMARK 3 T11: 0.3321 T22: 0.2567 REMARK 3 T33: 0.2638 T12: 0.0475 REMARK 3 T13: -0.0195 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 2.3871 L22: 5.2310 REMARK 3 L33: 3.9039 L12: -1.2183 REMARK 3 L13: 0.9758 L23: -0.0879 REMARK 3 S TENSOR REMARK 3 S11: 0.0048 S12: 0.0116 S13: -0.2826 REMARK 3 S21: 0.0271 S22: -0.1665 S23: 0.2892 REMARK 3 S31: 0.3743 S32: 0.3258 S33: 0.1273 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.0977 0.1955 -3.7110 REMARK 3 T TENSOR REMARK 3 T11: 0.3006 T22: 0.2758 REMARK 3 T33: 0.2012 T12: -0.0177 REMARK 3 T13: -0.0230 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 1.9662 L22: 3.0612 REMARK 3 L33: 3.9333 L12: -1.2525 REMARK 3 L13: 0.1699 L23: -0.6018 REMARK 3 S TENSOR REMARK 3 S11: 0.1271 S12: 0.2886 S13: 0.2597 REMARK 3 S21: -0.4023 S22: -0.2022 S23: -0.0740 REMARK 3 S31: -0.2999 S32: 0.6387 S33: 0.0282 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8A25 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1292123445. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3778 REMARK 200 MONOCHROMATOR : BARTELS MONOCHROMATOR WITH DUAL REMARK 200 CHANNEL CUT CRYSTALS (DCCM) IN (+ REMARK 200 --+) GEOMETRY REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.7 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27102 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.730 REMARK 200 RESOLUTION RANGE LOW (A) : 71.220 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 19.20 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 28.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 19.70 REMARK 200 R MERGE FOR SHELL (I) : 1.19200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14.7% (W/V) PEG3350, 1% (W/V) PEG 1K, REMARK 280 0.5% (W/V) PEG200, 8.9% (V/V) TACSIMATE PH 5, 200 MM NH4I, 1 MM REMARK 280 CACL2 AND 1 MM MGCL2; CRYOPROTECTION AND IODIDE SOAKING FOR REMARK 280 IODIDE-SAD: 10% (V/V) (2R,3R)-(-)-2,3-BUTANDIOLE, 16% (W/V) REMARK 280 PEG3350, 6% (V/V) TACSIMATE PH 5, 200 MM NH4I, PH 5.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.81567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.63133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.63133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 22.81567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 508 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -4 REMARK 465 ALA A -3 REMARK 465 SER A -2 REMARK 465 TRP A -1 REMARK 465 SER A 0 REMARK 465 HIS A 1 REMARK 465 PRO A 2 REMARK 465 GLN A 3 REMARK 465 PHE A 4 REMARK 465 GLU A 5 REMARK 465 LYS A 6 REMARK 465 GLY A 7 REMARK 465 ALA A 8 REMARK 465 GLU A 9 REMARK 465 THR A 10 REMARK 465 ALA A 11 REMARK 465 VAL A 12 REMARK 465 PRO A 13 REMARK 465 ASN A 14 REMARK 465 SER A 15 REMARK 465 SER A 16 REMARK 465 SER A 17 REMARK 465 MET A 18 REMARK 465 THR A 19 REMARK 465 ASN A 309 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 97 CG CD OE1 OE2 REMARK 470 ARG A 104 CZ NH1 NH2 REMARK 470 GLU A 250 CG CD OE1 OE2 REMARK 470 ILE A 251 CG1 CG2 CD1 REMARK 470 THR A 252 OG1 CG2 REMARK 470 LYS A 253 CG CD CE NZ REMARK 470 ASN A 254 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH21 ARG A 65 O HOH A 501 1.27 REMARK 500 HG SER A 246 OG SER A 262 1.58 REMARK 500 NH2 ARG A 65 O HOH A 501 1.93 REMARK 500 O HOH A 521 O HOH A 651 1.96 REMARK 500 OG SER A 246 OG SER A 262 2.00 REMARK 500 OE2 GLU A 39 O HOH A 503 2.06 REMARK 500 NE ARG A 104 O HOH A 504 2.09 REMARK 500 OG SER A 118 OD1 ASP A 120 2.09 REMARK 500 O HOH A 523 O HOH A 543 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 553 O HOH A 596 5554 1.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 29 -151.60 -133.90 REMARK 500 ASP A 172 98.65 -69.08 REMARK 500 LYS A 253 22.62 -77.05 REMARK 500 REMARK 500 REMARK: NULL DBREF1 8A25 A 19 309 UNP A0A378KFD4_LEGPN DBREF2 8A25 A A0A378KFD4 19 309 SEQADV 8A25 MET A -4 UNP A0A378KFD INITIATING METHIONINE SEQADV 8A25 ALA A -3 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 SER A -2 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 TRP A -1 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 SER A 0 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 HIS A 1 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 PRO A 2 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 GLN A 3 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 PHE A 4 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 GLU A 5 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 LYS A 6 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 GLY A 7 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 ALA A 8 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 GLU A 9 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 THR A 10 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 ALA A 11 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 VAL A 12 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 PRO A 13 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 ASN A 14 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 SER A 15 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 SER A 16 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 SER A 17 UNP A0A378KFD EXPRESSION TAG SEQADV 8A25 MET A 18 UNP A0A378KFD EXPRESSION TAG SEQRES 1 A 314 MET ALA SER TRP SER HIS PRO GLN PHE GLU LYS GLY ALA SEQRES 2 A 314 GLU THR ALA VAL PRO ASN SER SER SER MET THR PRO LEU SEQRES 3 A 314 ASN ASN ILE VAL VAL PHE GLY ASP SER LEU SER ASP ASN SEQRES 4 A 314 GLY ASN LEU TYR GLU TYR MET LYS HIS GLN LEU PRO GLN SEQRES 5 A 314 SER PRO PRO TYR PHE GLU GLY ARG PHE SER ASN GLY PRO SEQRES 6 A 314 VAL TRP ILE GLU ARG LEU ALA ALA SER TYR PHE PRO ASN SEQRES 7 A 314 ASP PRO ASN SER HIS LEU LEU ASP TYR ALA PHE GLY GLY SEQRES 8 A 314 ALA GLY VAL SER VAL ASP GLU GLU ASP ASP GLU VAL PHE SEQRES 9 A 314 PHE THR LEU ARG ARG GLU VAL ASN SER TYR LEU LEU ALA SEQRES 10 A 314 HIS GLN ASP LYS ALA SER PRO ASP SER LEU PHE VAL ILE SEQRES 11 A 314 TRP ILE GLY ALA ASN ASN TYR LEU GLY MET PRO VAL GLU SEQRES 12 A 314 VAL GLU GLU THR LEU LYS ASN VAL ASN ARG GLY ILE ALA SEQRES 13 A 314 ASP SER ILE GLN ARG LEU VAL ASP LYS GLY ALA LYS HIS SEQRES 14 A 314 ILE LEU VAL LEU ASN LEU PRO ASP LEU GLY ARG THR PRO SEQRES 15 A 314 ALA ALA LEU GLU PHE GLY SER VAL GLU GLU MET THR TYR SEQRES 16 A 314 PHE SER ALA GLN HIS ASN ASN ALA LEU SER ASN THR VAL SEQRES 17 A 314 ASP TYR PHE LYS LYS THR TYR PRO GLU VAL GLU TRP LEU SEQRES 18 A 314 PHE PHE ASP THR GLY SER HIS PHE ASP HIS VAL ILE GLU SEQRES 19 A 314 HIS ALA SER GLU TYR GLY PHE THR ASN ILE THR GLY THR SEQRES 20 A 314 CYS SER PHE SER ILE VAL ASP GLU ILE THR LYS ASN SER SEQRES 21 A 314 VAL LEU LYS MET VAL ALA SER VAL LYS PRO GLU LEU THR SEQRES 22 A 314 GLU SER ALA CYS ASP GLY TYR LEU PHE PHE ASP LEU VAL SEQRES 23 A 314 HIS PRO THR ALA LEU ALA HIS LYS ILE MET ALA GLU LYS SEQRES 24 A 314 ALA ARG LEU MET LEU ASP GLU ALA GLY VAL GLU PHE ALA SEQRES 25 A 314 GLU ASN HET MLA A 401 9 HET MLA A 402 9 HET BU3 A 403 16 HET PGE A 404 24 HET IOD A 405 1 HETNAM MLA MALONIC ACID HETNAM BU3 (R,R)-2,3-BUTANEDIOL HETNAM PGE TRIETHYLENE GLYCOL HETNAM IOD IODIDE ION HETSYN MLA DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; HETSYN 2 MLA METHANEDICARBOXYLIC ACID FORMUL 2 MLA 2(C3 H4 O4) FORMUL 4 BU3 C4 H10 O2 FORMUL 5 PGE C6 H14 O4 FORMUL 6 IOD I 1- FORMUL 7 HOH *168(H2 O) HELIX 1 AA1 GLY A 35 MET A 41 1 7 HELIX 2 AA2 VAL A 61 PHE A 71 1 11 HELIX 3 AA3 ASP A 74 SER A 77 5 4 HELIX 4 AA4 VAL A 91 ASP A 95 5 5 HELIX 5 AA5 THR A 101 HIS A 113 1 13 HELIX 6 AA6 GLY A 128 GLY A 134 1 7 HELIX 7 AA7 GLU A 138 LYS A 160 1 23 HELIX 8 AA8 ASP A 172 ARG A 175 5 4 HELIX 9 AA9 THR A 176 GLY A 183 1 8 HELIX 10 AB1 SER A 184 TYR A 210 1 27 HELIX 11 AB2 ASP A 219 HIS A 230 1 12 HELIX 12 AB3 ALA A 231 GLY A 235 5 5 HELIX 13 AB4 ILE A 251 ASN A 254 5 4 HELIX 14 AB5 SER A 255 SER A 262 1 8 HELIX 15 AB6 LYS A 264 THR A 268 5 5 HELIX 16 AB7 THR A 284 ALA A 302 1 19 SHEET 1 AA1 5 LEU A 79 ASP A 81 0 SHEET 2 AA1 5 ASN A 23 GLY A 28 1 N ILE A 24 O LEU A 80 SHEET 3 AA1 5 SER A 121 TRP A 126 1 O VAL A 124 N PHE A 27 SHEET 4 AA1 5 HIS A 164 LEU A 168 1 O LEU A 166 N PHE A 123 SHEET 5 AA1 5 GLU A 214 PHE A 218 1 O GLU A 214 N ILE A 165 SSBOND 1 CYS A 243 CYS A 272 1555 1555 2.00 CISPEP 1 LEU A 45 PRO A 46 0 -5.89 CISPEP 2 SER A 48 PRO A 49 0 -2.23 CISPEP 3 PRO A 49 PRO A 50 0 11.91 CRYST1 82.238 82.238 68.447 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012160 0.007020 0.000000 0.00000 SCALE2 0.000000 0.014041 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014610 0.00000