HEADER TRANSFERASE 22-JUN-22 8A8D TITLE ATP SULFURYLASE FROM METHANOTHERMOCOCCUS THERMOLITHOTROPHICUS - TITLE 2 MONOCLINIC FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP SULFURYLASE FROM METHANOTHERMOCOCCUS COMPND 3 THERMOLITHOTROPHICUS; COMPND 4 CHAIN: A, B; COMPND 5 EC: 2.7.7.4; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: THE GENE CONSTRUCT WAS EXPRESSED IN THE PET-28A(+) COMPND 8 VECTOR. THE PROTEIN PRODUCT CONTAINED A HIS-TAG IN ITS N-TERMINAL COMPND 9 PART AND A THROMBIN CLEAVAGE SITE IN BETWEEN. THE TAG WAS CLEAVED OFF COMPND 10 DURING THE PURIFICATION PROCESS WITH THE THROMBIN. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMOCOCCUS THERMOLITHOTROPHICUS DSM SOURCE 3 2095; SOURCE 4 ORGANISM_TAXID: 523845; SOURCE 5 STRAIN: DSM 2095; SOURCE 6 VARIANT: /; SOURCE 7 CELL_LINE: /; SOURCE 8 ATCC: /; SOURCE 9 ORGAN: /; SOURCE 10 TISSUE: /; SOURCE 11 CELL: /; SOURCE 12 GENE: SAT; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 16 EXPRESSION_SYSTEM_VARIANT: /; SOURCE 17 EXPRESSION_SYSTEM_CELL_LINE: /; SOURCE 18 EXPRESSION_SYSTEM_ATCC_NUMBER: /; SOURCE 19 EXPRESSION_SYSTEM_ORGAN: /; SOURCE 20 EXPRESSION_SYSTEM_TISSUE: /; SOURCE 21 EXPRESSION_SYSTEM_CELL: /; SOURCE 22 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 23 EXPRESSION_SYSTEM_PLASMID: PET28A(+) KEYWDS SULFATE-ASSIMILATION, METHANOGENS, ARCHAEA, APS, TRANSFERASE, KEYWDS 2 THERMOPHILE, METHANE, ATP, ACTIVATION, MARINE, PYROPHOSPHATE EXPDTA X-RAY DIFFRACTION AUTHOR M.JESPERSEN,T.WAGNER REVDAT 3 07-FEB-24 8A8D 1 REMARK REVDAT 2 15-NOV-23 8A8D 1 JRNL REVDAT 1 26-APR-23 8A8D 0 JRNL AUTH M.JESPERSEN,T.WAGNER JRNL TITL ASSIMILATORY SULFATE REDUCTION IN THE MARINE METHANOGEN JRNL TITL 2 METHANOTHERMOCOCCUS THERMOLITHOTROPHICUS. JRNL REF NAT MICROBIOL V. 8 1227 2023 JRNL REFN ESSN 2058-5276 JRNL PMID 37277534 JRNL DOI 10.1038/S41564-023-01398-8 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 82.3 REMARK 3 NUMBER OF REFLECTIONS : 41057 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2096 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.2800 - 5.1800 1.00 3283 177 0.2071 0.2372 REMARK 3 2 5.1800 - 4.1100 1.00 3205 159 0.1491 0.1705 REMARK 3 3 4.1100 - 3.5900 1.00 3173 177 0.1649 0.2000 REMARK 3 4 3.5900 - 3.2600 1.00 3175 158 0.1831 0.2206 REMARK 3 5 3.2600 - 3.0300 1.00 3134 166 0.2129 0.2893 REMARK 3 6 3.0300 - 2.8500 0.98 3087 167 0.2140 0.2666 REMARK 3 7 2.8500 - 2.7100 0.94 2958 173 0.2134 0.2662 REMARK 3 8 2.7100 - 2.5900 0.88 2760 155 0.2357 0.2789 REMARK 3 9 2.5900 - 2.4900 0.82 2578 121 0.2391 0.2908 REMARK 3 10 2.4900 - 2.4000 0.75 2360 145 0.2333 0.2786 REMARK 3 11 2.4000 - 2.3300 0.68 2148 104 0.2387 0.2453 REMARK 3 12 2.3300 - 2.2600 0.63 1973 98 0.2368 0.2909 REMARK 3 13 2.2600 - 2.2000 0.59 1830 125 0.2493 0.2993 REMARK 3 14 2.2000 - 2.1500 0.55 1707 89 0.2670 0.2759 REMARK 3 15 2.1500 - 2.1000 0.51 1590 82 0.2652 0.3420 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.160 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.10 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.4509 7.0113 34.3775 REMARK 3 T TENSOR REMARK 3 T11: 0.1695 T22: 0.2200 REMARK 3 T33: 0.2731 T12: 0.0143 REMARK 3 T13: 0.0211 T23: 0.0387 REMARK 3 L TENSOR REMARK 3 L11: 1.7064 L22: 1.3212 REMARK 3 L33: 1.4370 L12: 0.1525 REMARK 3 L13: -0.1035 L23: -0.0391 REMARK 3 S TENSOR REMARK 3 S11: 0.0208 S12: -0.1357 S13: -0.2600 REMARK 3 S21: 0.1732 S22: -0.0275 S23: -0.0574 REMARK 3 S31: 0.0842 S32: 0.0697 S33: -0.0008 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.7617 21.9487 18.1176 REMARK 3 T TENSOR REMARK 3 T11: 0.2136 T22: 0.2395 REMARK 3 T33: 0.2886 T12: 0.0657 REMARK 3 T13: 0.0189 T23: 0.0531 REMARK 3 L TENSOR REMARK 3 L11: 2.2211 L22: 1.3941 REMARK 3 L33: 1.6110 L12: 1.6166 REMARK 3 L13: -1.3295 L23: -0.5993 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: 0.1220 S13: -0.0957 REMARK 3 S21: 0.0840 S22: 0.0791 S23: 0.0618 REMARK 3 S31: -0.0493 S32: -0.1634 S33: -0.0659 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 320 THROUGH 382 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.3172 23.8616 5.6829 REMARK 3 T TENSOR REMARK 3 T11: 0.2471 T22: 0.1410 REMARK 3 T33: 0.3082 T12: -0.0078 REMARK 3 T13: 0.0100 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.7431 L22: 0.6811 REMARK 3 L33: 3.1428 L12: -0.2684 REMARK 3 L13: 0.8318 L23: -0.9773 REMARK 3 S TENSOR REMARK 3 S11: -0.0961 S12: -0.0519 S13: -0.2406 REMARK 3 S21: -0.0076 S22: -0.0167 S23: -0.0692 REMARK 3 S31: 0.1172 S32: 0.0642 S33: 0.0599 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 3 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.0868 60.3510 -34.0374 REMARK 3 T TENSOR REMARK 3 T11: 0.2892 T22: 0.5668 REMARK 3 T33: 0.3420 T12: 0.0026 REMARK 3 T13: -0.0930 T23: 0.0680 REMARK 3 L TENSOR REMARK 3 L11: 2.8538 L22: 4.2010 REMARK 3 L33: 1.9677 L12: -0.1357 REMARK 3 L13: -0.0785 L23: 0.5851 REMARK 3 S TENSOR REMARK 3 S11: -0.0320 S12: 0.6864 S13: 0.1543 REMARK 3 S21: -0.8136 S22: 0.2370 S23: 0.3883 REMARK 3 S31: -0.1454 S32: -0.6806 S33: -0.1620 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 37 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 55.7867 65.0951 -20.6906 REMARK 3 T TENSOR REMARK 3 T11: 0.1979 T22: 0.3010 REMARK 3 T33: 0.3747 T12: 0.0016 REMARK 3 T13: -0.0456 T23: 0.1004 REMARK 3 L TENSOR REMARK 3 L11: 1.4225 L22: 1.9046 REMARK 3 L33: 1.2436 L12: -0.4201 REMARK 3 L13: -0.4479 L23: 0.2260 REMARK 3 S TENSOR REMARK 3 S11: 0.1433 S12: 0.1851 S13: 0.3844 REMARK 3 S21: -0.0435 S22: -0.0627 S23: 0.0923 REMARK 3 S31: -0.1477 S32: -0.2349 S33: -0.0633 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 181 THROUGH 261 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.1419 46.1235 -13.6372 REMARK 3 T TENSOR REMARK 3 T11: 0.1815 T22: 0.1830 REMARK 3 T33: 0.2746 T12: -0.0336 REMARK 3 T13: -0.0126 T23: 0.0484 REMARK 3 L TENSOR REMARK 3 L11: 2.8512 L22: 0.5362 REMARK 3 L33: 2.3417 L12: -1.2140 REMARK 3 L13: 0.5469 L23: -0.4724 REMARK 3 S TENSOR REMARK 3 S11: 0.0251 S12: 0.1577 S13: 0.1405 REMARK 3 S21: -0.0826 S22: 0.0457 S23: 0.0959 REMARK 3 S31: 0.0148 S32: -0.0652 S33: -0.0861 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 262 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.2190 53.1518 -4.2065 REMARK 3 T TENSOR REMARK 3 T11: 0.2931 T22: 0.3094 REMARK 3 T33: 0.4211 T12: -0.0076 REMARK 3 T13: -0.0164 T23: 0.0632 REMARK 3 L TENSOR REMARK 3 L11: 1.7669 L22: 2.4836 REMARK 3 L33: 2.3504 L12: -2.0494 REMARK 3 L13: 0.9606 L23: -1.5758 REMARK 3 S TENSOR REMARK 3 S11: -0.3388 S12: -0.1830 S13: 0.3234 REMARK 3 S21: 0.5066 S22: 0.1924 S23: 0.0765 REMARK 3 S31: -0.1776 S32: -0.0354 S33: 0.1946 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 320 THROUGH 382 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.7726 47.5465 -3.3557 REMARK 3 T TENSOR REMARK 3 T11: 0.1942 T22: 0.1483 REMARK 3 T33: 0.2718 T12: 0.0004 REMARK 3 T13: 0.0001 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 1.4823 L22: 0.9218 REMARK 3 L33: 2.8838 L12: 0.0919 REMARK 3 L13: -0.4217 L23: -0.4799 REMARK 3 S TENSOR REMARK 3 S11: 0.0597 S12: 0.0619 S13: 0.1555 REMARK 3 S21: 0.0688 S22: -0.0312 S23: -0.0976 REMARK 3 S31: -0.3315 S32: -0.0159 S33: -0.0410 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FINAL CYCLES OF REFINEMENT WERE REMARK 3 PERFORMED WITH HYDROGENS IN RIDING POSITION, WITHOUT APPLYING REMARK 3 NON-CRYSTALLOGRAPHY SYMMETRY AND WITH TRANSLATIONAL-LIBERATION REMARK 3 SCREW. REMARK 4 REMARK 4 8A8D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1292123830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-FEB-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : / REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03320 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41069 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 65.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.13500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 1.14900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1V47 REMARK 200 REMARK 200 REMARK: TRANSPARENT, LONG BUT THIN PLATE-SHAPED CRYSTALS APPEARED REMARK 200 AFTER A FEW WEEKS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.85 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MTATPS IN 25 MM TRIS/HCL PH 7.6, 10% REMARK 280 V/V GLYCEROL (0.7 UL) AT A CONCENTRATION OF 27 MG.ML-1 WAS MIXED REMARK 280 WITH 0.7 UL RESERVOIR SOLUTION. CRYSTALS WERE OBTAINED IN THE REMARK 280 FOLLOWING CRYSTALLIZATION CONDITION: 20 % W/V POLYETHYLENE REMARK 280 GLYCOL 8000, 100 MM MES PH 6.0 AND 200 MM CALCIUM ACETATE., REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 92.64100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.26250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 92.64100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 27.26250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 GLY A 289 REMARK 465 VAL A 290 REMARK 465 GLY A 291 REMARK 465 GLU A 382 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 VAL B 2 REMARK 465 ALA B 288 REMARK 465 GLY B 289 REMARK 465 VAL B 290 REMARK 465 GLY B 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 75 3.44 80.02 REMARK 500 ASN A 92 30.74 -93.85 REMARK 500 ASN A 104 -126.17 61.26 REMARK 500 PHE A 209 15.37 -140.10 REMARK 500 TYR A 256 129.01 -171.88 REMARK 500 SER A 374 -8.39 -51.93 REMARK 500 ASN B 104 -129.49 60.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 412 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR A 143 O REMARK 620 2 LEU A 145 O 92.9 REMARK 620 3 ACT A 410 O 161.6 90.8 REMARK 620 4 ACT A 410 OXT 118.3 85.0 44.2 REMARK 620 5 HOH A 562 O 76.3 85.1 122.0 162.8 REMARK 620 6 HOH A 655 O 81.3 174.2 94.6 97.4 93.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 322 SG REMARK 620 2 CYS A 325 SG 112.9 REMARK 620 3 CYS A 334 SG 108.7 124.2 REMARK 620 4 HIS A 336 ND1 102.3 100.4 105.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 515 O REMARK 620 2 GLU B 95 OE1 88.5 REMARK 620 3 GLU B 95 OE2 137.7 54.5 REMARK 620 4 ACT B 402 O 85.5 137.7 134.8 REMARK 620 5 ACT B 402 OXT 83.2 162.5 125.7 57.0 REMARK 620 6 HOH B 519 O 82.1 74.6 103.4 63.1 119.1 REMARK 620 7 HOH B 542 O 105.0 87.9 59.5 134.0 79.5 161.1 REMARK 620 8 HOH B 557 O 141.8 127.3 73.1 76.2 58.6 117.1 68.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 143 O REMARK 620 2 LEU B 145 O 88.6 REMARK 620 3 GLU B 147 OE1 170.6 91.0 REMARK 620 4 HOH B 554 O 68.1 78.5 120.9 REMARK 620 5 HOH B 561 O 99.7 84.8 71.0 159.3 REMARK 620 6 HOH B 631 O 97.0 171.0 82.3 110.2 87.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 322 SG REMARK 620 2 CYS B 325 SG 114.2 REMARK 620 3 CYS B 334 SG 106.8 123.6 REMARK 620 4 HIS B 336 ND1 96.2 104.9 107.3 REMARK 620 N 1 2 3 DBREF 8A8D A -2 382 PDB 8A8D 8A8D -2 382 DBREF 8A8D B -2 382 PDB 8A8D 8A8D -2 382 SEQRES 1 A 385 GLY SER HIS MET VAL SER LYS PRO HIS GLY GLY LYS LEU SEQRES 2 A 385 VAL ASN ARG VAL ALA THR GLU LYS THR LYS GLU LYS ILE SEQRES 3 A 385 LEU GLU GLU GLN ASN GLU PHE SER LYS VAL GLN ILE ARG SEQRES 4 A 385 GLU GLY THR ALA ILE ASP LEU GLU ASN ILE ALA HIS GLY SEQRES 5 A 385 VAL TYR SER PRO LEU THR GLY PHE LEU ARG LYS ASP GLU SEQRES 6 A 385 PHE GLN SER VAL LEU ASP ASN MET ARG LEU PRO ASN GLU SEQRES 7 A 385 LEU PRO TRP SER ILE PRO ILE VAL LEU ASP VAL THR GLU SEQRES 8 A 385 LYS GLU LYS ASN PHE GLY GLU GLY ASP VAL ILE LEU LEU SEQRES 9 A 385 TYR TYR ASN ASP THR PRO ILE ALA LYS MET GLN VAL ASP SEQRES 10 A 385 GLU ILE TYR THR TYR ASP LYS LYS GLU PHE ALA LYS LYS SEQRES 11 A 385 VAL PHE LYS THR ASP GLU GLU ALA HIS PRO GLY VAL ALA SEQRES 12 A 385 LYS THR TYR ALA LEU GLY GLU TYR LEU VAL GLY GLY GLU SEQRES 13 A 385 ILE GLU LEU LEU ASN GLU VAL PRO ASN PRO PHE LYS SER SEQRES 14 A 385 HIS THR LEU ARG PRO VAL GLU THR ARG ALA LEU PHE LYS SEQRES 15 A 385 GLU LYS GLY TRP GLU THR ILE VAL ALA PHE GLN THR ARG SEQRES 16 A 385 ASN VAL PRO HIS LEU GLY HIS GLU TYR LEU GLN LYS LEU SEQRES 17 A 385 ALA LEU THR PHE VAL ASP GLY VAL PHE VAL ASN PRO VAL SEQRES 18 A 385 ILE GLY LYS LYS LYS LYS GLY ASP TYR LYS ASP GLU VAL SEQRES 19 A 385 ILE LEU LYS ALA TYR GLU THR LEU PHE GLU HIS TYR TYR SEQRES 20 A 385 PRO LYS ASP THR ASP ILE LEU ALA THR VAL ARG TYR GLU SEQRES 21 A 385 MET ARG TYR ALA GLY PRO ARG GLU ALA ILE HIS HIS ALA SEQRES 22 A 385 ILE MET ARG LYS ASN PHE GLY CYS THR HIS PHE ILE VAL SEQRES 23 A 385 GLY ARG ASP HIS ALA GLY VAL GLY ASP TYR TYR GLY PRO SEQRES 24 A 385 TYR GLU ALA GLN GLU ILE PHE GLN ASN PHE PRO ASP LEU SEQRES 25 A 385 GLU ILE SER PRO ILE PHE PHE ARG GLU PHE TYR TYR CYS SEQRES 26 A 385 LYS LYS CYS ASN ALA ILE VAL HIS ASP ARG ILE CYS PRO SEQRES 27 A 385 HIS THR SER GLU TYR ARG GLU HIS PHE SER GLY THR LYS SEQRES 28 A 385 ILE ARG ASN MET ILE VAL ASN GLY GLU LEU PRO PRO GLU SEQRES 29 A 385 TYR PHE MET ARG LYS GLU VAL TYR GLU THR ILE ARG SER SEQRES 30 A 385 PHE GLU ASN PRO PHE VAL ASP GLU SEQRES 1 B 385 GLY SER HIS MET VAL SER LYS PRO HIS GLY GLY LYS LEU SEQRES 2 B 385 VAL ASN ARG VAL ALA THR GLU LYS THR LYS GLU LYS ILE SEQRES 3 B 385 LEU GLU GLU GLN ASN GLU PHE SER LYS VAL GLN ILE ARG SEQRES 4 B 385 GLU GLY THR ALA ILE ASP LEU GLU ASN ILE ALA HIS GLY SEQRES 5 B 385 VAL TYR SER PRO LEU THR GLY PHE LEU ARG LYS ASP GLU SEQRES 6 B 385 PHE GLN SER VAL LEU ASP ASN MET ARG LEU PRO ASN GLU SEQRES 7 B 385 LEU PRO TRP SER ILE PRO ILE VAL LEU ASP VAL THR GLU SEQRES 8 B 385 LYS GLU LYS ASN PHE GLY GLU GLY ASP VAL ILE LEU LEU SEQRES 9 B 385 TYR TYR ASN ASP THR PRO ILE ALA LYS MET GLN VAL ASP SEQRES 10 B 385 GLU ILE TYR THR TYR ASP LYS LYS GLU PHE ALA LYS LYS SEQRES 11 B 385 VAL PHE LYS THR ASP GLU GLU ALA HIS PRO GLY VAL ALA SEQRES 12 B 385 LYS THR TYR ALA LEU GLY GLU TYR LEU VAL GLY GLY GLU SEQRES 13 B 385 ILE GLU LEU LEU ASN GLU VAL PRO ASN PRO PHE LYS SER SEQRES 14 B 385 HIS THR LEU ARG PRO VAL GLU THR ARG ALA LEU PHE LYS SEQRES 15 B 385 GLU LYS GLY TRP GLU THR ILE VAL ALA PHE GLN THR ARG SEQRES 16 B 385 ASN VAL PRO HIS LEU GLY HIS GLU TYR LEU GLN LYS LEU SEQRES 17 B 385 ALA LEU THR PHE VAL ASP GLY VAL PHE VAL ASN PRO VAL SEQRES 18 B 385 ILE GLY LYS LYS LYS LYS GLY ASP TYR LYS ASP GLU VAL SEQRES 19 B 385 ILE LEU LYS ALA TYR GLU THR LEU PHE GLU HIS TYR TYR SEQRES 20 B 385 PRO LYS ASP THR ASP ILE LEU ALA THR VAL ARG TYR GLU SEQRES 21 B 385 MET ARG TYR ALA GLY PRO ARG GLU ALA ILE HIS HIS ALA SEQRES 22 B 385 ILE MET ARG LYS ASN PHE GLY CYS THR HIS PHE ILE VAL SEQRES 23 B 385 GLY ARG ASP HIS ALA GLY VAL GLY ASP TYR TYR GLY PRO SEQRES 24 B 385 TYR GLU ALA GLN GLU ILE PHE GLN ASN PHE PRO ASP LEU SEQRES 25 B 385 GLU ILE SER PRO ILE PHE PHE ARG GLU PHE TYR TYR CYS SEQRES 26 B 385 LYS LYS CYS ASN ALA ILE VAL HIS ASP ARG ILE CYS PRO SEQRES 27 B 385 HIS THR SER GLU TYR ARG GLU HIS PHE SER GLY THR LYS SEQRES 28 B 385 ILE ARG ASN MET ILE VAL ASN GLY GLU LEU PRO PRO GLU SEQRES 29 B 385 TYR PHE MET ARG LYS GLU VAL TYR GLU THR ILE ARG SER SEQRES 30 B 385 PHE GLU ASN PRO PHE VAL ASP GLU HET ZN A 401 1 HET GOL A 402 6 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET GOL A 406 6 HET ACT A 407 4 HET ACT A 408 4 HET ACT A 409 4 HET ACT A 410 4 HET EDO A 411 4 HET CA A 412 1 HET ZN B 401 1 HET ACT B 402 4 HET ACT B 403 4 HET ACT B 404 4 HET ACT B 405 4 HET CA B 406 1 HET CA B 407 1 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM ACT ACETATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 GOL 5(C3 H8 O3) FORMUL 9 ACT 8(C2 H3 O2 1-) FORMUL 13 EDO C2 H6 O2 FORMUL 14 CA 3(CA 2+) FORMUL 22 HOH *354(H2 O) HELIX 1 AA1 THR A 16 GLU A 26 1 11 HELIX 2 AA2 GLN A 27 PHE A 30 5 4 HELIX 3 AA3 ARG A 36 HIS A 48 1 13 HELIX 4 AA4 ARG A 59 MET A 70 1 12 HELIX 5 AA5 ASP A 120 LYS A 130 1 11 HELIX 6 AA6 HIS A 136 ALA A 144 1 9 HELIX 7 AA7 PHE A 164 THR A 168 5 5 HELIX 8 AA8 ARG A 170 LYS A 181 1 12 HELIX 9 AA9 HIS A 196 THR A 208 1 13 HELIX 10 AB1 LYS A 228 TYR A 244 1 17 HELIX 11 AB2 GLY A 262 GLY A 277 1 16 HELIX 12 AB3 TYR A 297 ILE A 302 1 6 HELIX 13 AB4 PHE A 303 PHE A 306 5 4 HELIX 14 AB5 HIS A 330 CYS A 334 5 5 HELIX 15 AB6 THR A 337 GLU A 339 5 3 HELIX 16 AB7 SER A 345 ASN A 355 1 11 HELIX 17 AB8 ARG A 365 SER A 374 1 10 HELIX 18 AB9 THR B 16 GLU B 26 1 11 HELIX 19 AC1 GLN B 27 PHE B 30 5 4 HELIX 20 AC2 ARG B 36 HIS B 48 1 13 HELIX 21 AC3 ARG B 59 MET B 70 1 12 HELIX 22 AC4 ASP B 120 LYS B 130 1 11 HELIX 23 AC5 HIS B 136 ALA B 144 1 9 HELIX 24 AC6 PHE B 164 THR B 168 5 5 HELIX 25 AC7 ARG B 170 LYS B 181 1 12 HELIX 26 AC8 HIS B 196 THR B 208 1 13 HELIX 27 AC9 LYS B 228 TYR B 244 1 17 HELIX 28 AD1 GLY B 262 GLY B 277 1 16 HELIX 29 AD2 TYR B 297 ILE B 302 1 6 HELIX 30 AD3 PHE B 303 PHE B 306 5 4 HELIX 31 AD4 HIS B 330 CYS B 334 5 5 HELIX 32 AD5 THR B 337 GLU B 339 5 3 HELIX 33 AD6 SER B 345 ASN B 355 1 11 HELIX 34 AD7 ARG B 365 SER B 374 1 10 SHEET 1 AA1 5 SER A 31 GLN A 34 0 SHEET 2 AA1 5 VAL A 98 TYR A 103 1 O LEU A 100 N VAL A 33 SHEET 3 AA1 5 THR A 106 GLN A 112 -1 O MET A 111 N ILE A 99 SHEET 4 AA1 5 TYR A 148 LEU A 156 -1 O GLU A 153 N GLN A 112 SHEET 5 AA1 5 LEU A 84 VAL A 86 -1 N VAL A 86 O TYR A 148 SHEET 1 AA2 3 GLY A 56 PHE A 57 0 SHEET 2 AA2 3 TYR A 148 LEU A 156 -1 O GLY A 152 N PHE A 57 SHEET 3 AA2 3 GLU A 115 TYR A 117 -1 N GLU A 115 O GLY A 151 SHEET 1 AA3 3 ASP A 249 LEU A 251 0 SHEET 2 AA3 3 GLY A 212 ILE A 219 1 N VAL A 215 O ILE A 250 SHEET 3 AA3 3 VAL A 254 ARG A 255 1 O VAL A 254 N ILE A 219 SHEET 1 AA4 5 ASP A 249 LEU A 251 0 SHEET 2 AA4 5 GLY A 212 ILE A 219 1 N VAL A 215 O ILE A 250 SHEET 3 AA4 5 ILE A 186 THR A 191 1 N VAL A 187 O PHE A 214 SHEET 4 AA4 5 HIS A 280 ILE A 282 1 O ILE A 282 N ALA A 188 SHEET 5 AA4 5 SER A 312 ILE A 314 1 O ILE A 314 N PHE A 281 SHEET 1 AA5 3 ALA A 327 VAL A 329 0 SHEET 2 AA5 3 TYR A 320 CYS A 322 -1 N TYR A 320 O VAL A 329 SHEET 3 AA5 3 ARG A 341 GLU A 342 -1 O GLU A 342 N TYR A 321 SHEET 1 AA6 5 SER B 31 GLN B 34 0 SHEET 2 AA6 5 VAL B 98 TYR B 103 1 O TYR B 102 N VAL B 33 SHEET 3 AA6 5 THR B 106 GLN B 112 -1 O MET B 111 N ILE B 99 SHEET 4 AA6 5 TYR B 148 LEU B 156 -1 O GLU B 155 N LYS B 110 SHEET 5 AA6 5 ASP B 85 VAL B 86 -1 N VAL B 86 O TYR B 148 SHEET 1 AA7 3 GLY B 56 PHE B 57 0 SHEET 2 AA7 3 TYR B 148 LEU B 156 -1 O GLY B 152 N PHE B 57 SHEET 3 AA7 3 GLU B 115 TYR B 117 -1 N TYR B 117 O LEU B 149 SHEET 1 AA8 3 ASP B 249 LEU B 251 0 SHEET 2 AA8 3 GLY B 212 ILE B 219 1 N VAL B 215 O ILE B 250 SHEET 3 AA8 3 VAL B 254 ARG B 255 1 O VAL B 254 N ILE B 219 SHEET 1 AA9 5 ASP B 249 LEU B 251 0 SHEET 2 AA9 5 GLY B 212 ILE B 219 1 N VAL B 215 O ILE B 250 SHEET 3 AA9 5 ILE B 186 THR B 191 1 N VAL B 187 O PHE B 214 SHEET 4 AA9 5 HIS B 280 ILE B 282 1 O HIS B 280 N ILE B 186 SHEET 5 AA9 5 SER B 312 ILE B 314 1 O ILE B 314 N PHE B 281 SHEET 1 AB1 3 ALA B 327 VAL B 329 0 SHEET 2 AB1 3 TYR B 320 CYS B 322 -1 N TYR B 320 O VAL B 329 SHEET 3 AB1 3 ARG B 341 GLU B 342 -1 O GLU B 342 N TYR B 321 LINK O TYR A 143 CA CA A 412 1555 1555 2.69 LINK O LEU A 145 CA CA A 412 1555 1555 2.33 LINK SG CYS A 322 ZN ZN A 401 1555 1555 2.36 LINK SG CYS A 325 ZN ZN A 401 1555 1555 2.35 LINK SG CYS A 334 ZN ZN A 401 1555 1555 2.28 LINK ND1 HIS A 336 ZN ZN A 401 1555 1555 2.05 LINK O ACT A 410 CA CA A 412 1555 1555 2.46 LINK OXT ACT A 410 CA CA A 412 1555 1555 3.14 LINK CA CA A 412 O HOH A 562 1555 1555 2.90 LINK CA CA A 412 O HOH A 655 1555 1555 2.38 LINK O HOH A 515 CA CA B 406 4565 1555 2.46 LINK OE1 GLU B 95 CA CA B 406 1555 1555 2.50 LINK OE2 GLU B 95 CA CA B 406 1555 1555 2.29 LINK O TYR B 143 CA CA B 407 1555 1555 2.60 LINK O LEU B 145 CA CA B 407 1555 1555 2.53 LINK OE1 GLU B 147 CA CA B 407 1555 1555 2.44 LINK SG CYS B 322 ZN ZN B 401 1555 1555 2.28 LINK SG CYS B 325 ZN ZN B 401 1555 1555 2.36 LINK SG CYS B 334 ZN ZN B 401 1555 1555 2.33 LINK ND1 HIS B 336 ZN ZN B 401 1555 1555 2.07 LINK O ACT B 402 CA CA B 406 1555 1555 2.39 LINK OXT ACT B 402 CA CA B 406 1555 1555 2.38 LINK CA CA B 406 O HOH B 519 1555 1555 2.49 LINK CA CA B 406 O HOH B 542 1555 1555 3.01 LINK CA CA B 406 O HOH B 557 1555 1555 3.14 LINK CA CA B 407 O HOH B 554 1555 1555 2.34 LINK CA CA B 407 O HOH B 561 1555 1555 2.36 LINK CA CA B 407 O HOH B 631 1555 1555 2.36 CISPEP 1 SER A 52 PRO A 53 0 7.09 CISPEP 2 SER B 52 PRO B 53 0 6.47 CRYST1 185.282 54.525 85.430 90.00 95.91 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005397 0.000000 0.000559 0.00000 SCALE2 0.000000 0.018340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011768 0.00000