data_8AEZ # _entry.id 8AEZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.367 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8AEZ pdb_00008aez 10.2210/pdb8aez/pdb WWPDB D_1292124233 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.details 'The same protein, glycosylated' _pdbx_database_related.db_id 8AIC _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8AEZ _pdbx_database_status.recvd_initial_deposition_date 2022-07-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _audit_author.name 'Backovic, M.' _audit_author.pdbx_ordinal 1 _audit_author.identifier_ORCID 0000-0001-8814-4428 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 14 _citation.language ? _citation.page_first 1262 _citation.page_last 1262 _citation.title 'The crystal structure of a simian Foamy Virus receptor binding domain provides clues about entry into host cells.' _citation.year 2023 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-023-36923-0 _citation.pdbx_database_id_PubMed 36878926 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Fernandez, I.' 1 ? primary 'Dynesen, L.T.' 2 ? primary 'Coquin, Y.' 3 ? primary 'Pederzoli, R.' 4 ? primary 'Brun, D.' 5 ? primary 'Haouz, A.' 6 ? primary 'Gessain, A.' 7 ? primary 'Rey, F.A.' 8 ? primary 'Buseyne, F.' 9 ? primary 'Backovic, M.' 10 ? # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 120 _cell.angle_gamma_esd ? _cell.entry_id 8AEZ _cell.details ? _cell.formula_units_Z ? _cell.length_a 99.451 _cell.length_a_esd ? _cell.length_b 99.451 _cell.length_b_esd ? _cell.length_c 120.609 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8AEZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Envelope glycoprotein gp130' 40288.566 1 ? ? ? ? 2 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 3 branched man ;alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 1397.245 1 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 5 ? ? ? ? 5 water nat water 18.015 31 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Env polyprotein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;RDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANWTSSKLYGKAR MGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGGLNRLFRNISVL DVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKCLTSDHTRCLYY PEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNAR AFVGLIDPKFPPTYPDDDDK ; _entity_poly.pdbx_seq_one_letter_code_can ;RDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANWTSSKLYGKAR MGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGGLNRLFRNISVL DVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKCLTSDHTRCLYY PEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNAR AFVGLIDPKFPPTYPDDDDK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ASP n 1 3 GLN n 1 4 GLU n 1 5 GLN n 1 6 TYR n 1 7 ILE n 1 8 HIS n 1 9 ARG n 1 10 LYS n 1 11 CYS n 1 12 TYR n 1 13 GLN n 1 14 GLU n 1 15 PHE n 1 16 ALA n 1 17 HIS n 1 18 CYS n 1 19 TYR n 1 20 LEU n 1 21 VAL n 1 22 LYS n 1 23 TYR n 1 24 LYS n 1 25 THR n 1 26 PRO n 1 27 GLN n 1 28 PRO n 1 29 TRP n 1 30 PRO n 1 31 ASN n 1 32 GLU n 1 33 GLY n 1 34 LEU n 1 35 ILE n 1 36 ALA n 1 37 ASP n 1 38 GLN n 1 39 CYS n 1 40 PRO n 1 41 LEU n 1 42 PRO n 1 43 GLY n 1 44 LEU n 1 45 ALA n 1 46 ASP n 1 47 VAL n 1 48 SER n 1 49 PHE n 1 50 TYR n 1 51 PRO n 1 52 TYR n 1 53 GLN n 1 54 ALA n 1 55 ILE n 1 56 TRP n 1 57 ASP n 1 58 TYR n 1 59 TYR n 1 60 ALA n 1 61 LYS n 1 62 ILE n 1 63 GLU n 1 64 ASN n 1 65 ILE n 1 66 ARG n 1 67 PRO n 1 68 ALA n 1 69 ASN n 1 70 TRP n 1 71 THR n 1 72 SER n 1 73 SER n 1 74 LYS n 1 75 LEU n 1 76 TYR n 1 77 GLY n 1 78 LYS n 1 79 ALA n 1 80 ARG n 1 81 MET n 1 82 GLY n 1 83 SER n 1 84 TYR n 1 85 TYR n 1 86 ILE n 1 87 PRO n 1 88 LYS n 1 89 ARG n 1 90 LEU n 1 91 ARG n 1 92 ASN n 1 93 ILE n 1 94 ASN n 1 95 ASN n 1 96 THR n 1 97 HIS n 1 98 ILE n 1 99 LEU n 1 100 PHE n 1 101 CYS n 1 102 SER n 1 103 ASP n 1 104 VAL n 1 105 LEU n 1 106 TYR n 1 107 SER n 1 108 LYS n 1 109 TRP n 1 110 TYR n 1 111 ASN n 1 112 LEU n 1 113 GLN n 1 114 ASN n 1 115 SER n 1 116 ILE n 1 117 LEU n 1 118 GLN n 1 119 ASN n 1 120 GLU n 1 121 ASN n 1 122 GLU n 1 123 LEU n 1 124 THR n 1 125 LYS n 1 126 ARG n 1 127 LEU n 1 128 SER n 1 129 ASN n 1 130 LEU n 1 131 THR n 1 132 ILE n 1 133 GLY n 1 134 ASN n 1 135 LYS n 1 136 LEU n 1 137 LYS n 1 138 ASN n 1 139 ARG n 1 140 ALA n 1 141 LEU n 1 142 PRO n 1 143 TYR n 1 144 GLU n 1 145 TRP n 1 146 ALA n 1 147 LYS n 1 148 GLY n 1 149 GLY n 1 150 LEU n 1 151 ASN n 1 152 ARG n 1 153 LEU n 1 154 PHE n 1 155 ARG n 1 156 ASN n 1 157 ILE n 1 158 SER n 1 159 VAL n 1 160 LEU n 1 161 ASP n 1 162 VAL n 1 163 CYS n 1 164 SER n 1 165 ARG n 1 166 PRO n 1 167 GLU n 1 168 MET n 1 169 VAL n 1 170 LEU n 1 171 LEU n 1 172 LEU n 1 173 ASN n 1 174 LYS n 1 175 THR n 1 176 TYR n 1 177 TYR n 1 178 THR n 1 179 PHE n 1 180 SER n 1 181 LEU n 1 182 TRP n 1 183 GLU n 1 184 GLY n 1 185 ASP n 1 186 CYS n 1 187 ASN n 1 188 ILE n 1 189 THR n 1 190 ARG n 1 191 TYR n 1 192 ASN n 1 193 VAL n 1 194 ASN n 1 195 GLU n 1 196 THR n 1 197 VAL n 1 198 PRO n 1 199 GLU n 1 200 CYS n 1 201 LYS n 1 202 ASP n 1 203 PHE n 1 204 PRO n 1 205 HIS n 1 206 ARG n 1 207 ARG n 1 208 PHE n 1 209 ASN n 1 210 ASP n 1 211 HIS n 1 212 PRO n 1 213 TYR n 1 214 SER n 1 215 CYS n 1 216 ARG n 1 217 LEU n 1 218 TRP n 1 219 ARG n 1 220 TYR n 1 221 ARG n 1 222 GLU n 1 223 GLY n 1 224 LYS n 1 225 GLU n 1 226 GLU n 1 227 VAL n 1 228 LYS n 1 229 CYS n 1 230 LEU n 1 231 THR n 1 232 SER n 1 233 ASP n 1 234 HIS n 1 235 THR n 1 236 ARG n 1 237 CYS n 1 238 LEU n 1 239 TYR n 1 240 TYR n 1 241 PRO n 1 242 GLU n 1 243 TYR n 1 244 SER n 1 245 ASN n 1 246 PRO n 1 247 GLU n 1 248 ALA n 1 249 LEU n 1 250 PHE n 1 251 ASP n 1 252 PHE n 1 253 GLY n 1 254 PHE n 1 255 LEU n 1 256 SER n 1 257 TYR n 1 258 MET n 1 259 ARG n 1 260 ASN n 1 261 PHE n 1 262 PRO n 1 263 GLY n 1 264 PRO n 1 265 GLN n 1 266 CYS n 1 267 ILE n 1 268 GLU n 1 269 SER n 1 270 THR n 1 271 SER n 1 272 ILE n 1 273 ARG n 1 274 GLN n 1 275 GLN n 1 276 ASP n 1 277 TYR n 1 278 GLU n 1 279 VAL n 1 280 TYR n 1 281 SER n 1 282 ILE n 1 283 TYR n 1 284 GLN n 1 285 GLU n 1 286 CYS n 1 287 LYS n 1 288 LEU n 1 289 ALA n 1 290 SER n 1 291 LYS n 1 292 THR n 1 293 TYR n 1 294 GLY n 1 295 ILE n 1 296 ASP n 1 297 SER n 1 298 VAL n 1 299 LEU n 1 300 PHE n 1 301 SER n 1 302 LEU n 1 303 LYS n 1 304 ASN n 1 305 PHE n 1 306 LEU n 1 307 ASN n 1 308 TYR n 1 309 THR n 1 310 GLY n 1 311 LYS n 1 312 PRO n 1 313 VAL n 1 314 ASN n 1 315 GLU n 1 316 MET n 1 317 PRO n 1 318 ASN n 1 319 ALA n 1 320 ARG n 1 321 ALA n 1 322 PHE n 1 323 VAL n 1 324 GLY n 1 325 LEU n 1 326 ILE n 1 327 ASP n 1 328 PRO n 1 329 LYS n 1 330 PHE n 1 331 PRO n 1 332 PRO n 1 333 THR n 1 334 TYR n 1 335 PRO n 1 336 ASP n 1 337 ASP n 1 338 ASP n 1 339 ASP n 1 340 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 340 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene env _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Simian foamy virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11642 _entity_src_gen.pdbx_gene_src_variant BAK74 _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7227 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Schneider _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 2 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code K7YEW5_9RETR _struct_ref.pdbx_db_accession K7YEW5 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RDQEQYIHRKCYQEFAHCYLVKYKTPQPWPNEGLIADQCPLPGLADVSFYPYQAIWDYYAKIENIRPANWTSSKLYGKAR MGSYYIPKRLRNINNTHILFCSDVLYSKWYNLQNSILQNENELTKRLSNLTIGNKLKNRALPYEWAKGGLNRLFRNISVL DVCSRPEMVLLLNKTYYTFSLWEGDCNITRYNVNETVPECKDFPHRRFNDHPYSCRLWRYREGKEEVKCLTSDHTRCLYY PEYSNPEALFDFGFLSYMRNFPGPQCIESTSIRQQDYEVYSIYQECKLASKTYGIDSVLFSLKNFLNYTGKPVNEMPNAR AFVGLIDPKFPPTYP ; _struct_ref.pdbx_align_begin 218 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 8AEZ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 335 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession K7YEW5 _struct_ref_seq.db_align_beg 218 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 552 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 218 _struct_ref_seq.pdbx_auth_seq_align_end 552 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8AEZ ASP A 336 ? UNP K7YEW5 ? ? 'expression tag' 553 1 1 8AEZ ASP A 337 ? UNP K7YEW5 ? ? 'expression tag' 554 2 1 8AEZ ASP A 338 ? UNP K7YEW5 ? ? 'expression tag' 555 3 1 8AEZ ASP A 339 ? UNP K7YEW5 ? ? 'expression tag' 556 4 1 8AEZ LYS A 340 ? UNP K7YEW5 ? ? 'expression tag' 557 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8AEZ _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 69.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M Tris pH 8.5, 3.5M sodium formate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2020-06-19 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9786 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9786 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8AEZ _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.574 _reflns.d_resolution_low 49.73 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 22363 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.91 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 20.3 _reflns.pdbx_Rmerge_I_obs 0.2051 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.1 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.04701 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.986 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # _reflns_shell.d_res_high 2.574 _reflns_shell.d_res_low 2.666 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.85 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 2101 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.9362 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.2117 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.846 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] 1.6373 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][2] 1.6373 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] -3.2747 _refine.B_iso_max ? _refine.B_iso_mean 75.14 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.942 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8AEZ _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.574 _refine.ls_d_res_low 49.73 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 22357 _refine.ls_number_reflns_R_free 1052 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.9 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2153 _refine.ls_R_factor_R_free 0.253 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2134 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.236 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.232 _refine.pdbx_overall_SU_R_Blow_DPI 0.285 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI 0.289 _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 8AEZ _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.36 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.574 _refine_hist.d_res_low 49.73 _refine_hist.number_atoms_solvent 31 _refine_hist.number_atoms_total 2945 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 2711 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 203 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 3016 ? t_bond_d 2 HARMONIC 'X-RAY DIFFRACTION' ? 0.98 ? 4129 ? t_angle_deg 2 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1069 ? t_dihedral_angle_d 2 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 490 ? t_gen_planes 5 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 3016 ? t_it 10 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 426 ? t_chiral_improper_torsion 5 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 2143 ? t_ideal_dist_contact 4 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 3.5 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 16.74 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.574 _refine_ls_shell.d_res_low 49.73 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 22 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.percent_reflns_obs 98.06 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2989 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2885 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 8AEZ _struct.title 'X-ray structure of the deglycosylated receptor binding domain of Env glycoprotein of Simian Foamy virus' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8AEZ _struct_keywords.text 'Receptor binding domain, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ARG A 1 ? ALA A 16 ? ARG A 218 ALA A 233 1 ? 16 HELX_P HELX_P2 AA2 GLN A 53 ? TYR A 59 ? GLN A 270 TYR A 276 5 ? 7 HELX_P HELX_P3 AA3 THR A 71 ? LEU A 75 ? THR A 288 LEU A 292 5 ? 5 HELX_P HELX_P4 AA4 PRO A 87 ? ARG A 91 ? PRO A 304 ARG A 308 5 ? 5 HELX_P HELX_P5 AA5 SER A 115 ? LEU A 130 ? SER A 332 LEU A 347 1 ? 16 HELX_P HELX_P6 AA6 ASN A 138 ? LEU A 141 ? ASN A 355 LEU A 358 5 ? 4 HELX_P HELX_P7 AA7 LEU A 160 ? ARG A 165 ? LEU A 377 ARG A 382 1 ? 6 HELX_P HELX_P8 AA8 ARG A 165 ? ASN A 173 ? ARG A 382 ASN A 390 1 ? 9 HELX_P HELX_P9 AA9 GLY A 184 ? ILE A 188 ? GLY A 401 ILE A 405 5 ? 5 HELX_P HELX_P10 AB1 ASN A 192 ? VAL A 197 ? ASN A 409 VAL A 414 1 ? 6 HELX_P HELX_P11 AB2 ASP A 251 ? MET A 258 ? ASP A 468 MET A 475 1 ? 8 HELX_P HELX_P12 AB3 ILE A 282 ? GLY A 294 ? ILE A 499 GLY A 511 1 ? 13 HELX_P HELX_P13 AB4 GLY A 294 ? LEU A 306 ? GLY A 511 LEU A 523 1 ? 13 HELX_P HELX_P14 AB5 PRO A 312 ? MET A 316 ? PRO A 529 MET A 533 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 11 SG ? ? ? 1_555 A CYS 286 SG ? ? A CYS 228 A CYS 503 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf2 disulf ? ? A CYS 18 SG ? ? ? 1_555 A CYS 101 SG ? ? A CYS 235 A CYS 318 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf3 disulf ? ? A CYS 39 SG ? ? ? 1_555 A CYS 163 SG ? ? A CYS 256 A CYS 380 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? A CYS 186 SG ? ? ? 1_555 A CYS 266 SG ? ? A CYS 403 A CYS 483 1_555 ? ? ? ? ? ? ? 2.058 ? ? disulf5 disulf ? ? A CYS 200 SG ? ? ? 1_555 A CYS 215 SG ? ? A CYS 417 A CYS 432 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf6 disulf ? ? A CYS 229 SG ? ? ? 1_555 A CYS 237 SG ? ? A CYS 446 A CYS 454 1_555 ? ? ? ? ? ? ? 2.041 ? ? covale1 covale one ? A ASN 69 ND2 ? ? ? 1_555 H NAG . C1 ? ? A ASN 286 A NAG 605 1_555 ? ? ? ? ? ? ? 1.434 ? N-Glycosylation covale2 covale one ? A ASN 94 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 311 A NAG 602 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation covale3 covale one ? A ASN 129 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 346 A NAG 601 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale4 covale one ? A ASN 156 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 373 B NAG 1 1_555 ? ? ? ? ? ? ? 1.428 ? N-Glycosylation covale5 covale one ? A ASN 173 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 390 C NAG 1 1_555 ? ? ? ? ? ? ? 1.429 ? N-Glycosylation covale6 covale one ? A ASN 187 ND2 ? ? ? 1_555 F NAG . C1 ? ? A ASN 404 A NAG 603 1_555 ? ? ? ? ? ? ? 1.431 ? N-Glycosylation covale7 covale one ? A ASN 307 ND2 ? ? ? 1_555 G NAG . C1 ? ? A ASN 524 A NAG 604 1_555 ? ? ? ? ? ? ? 1.432 ? N-Glycosylation covale8 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.412 ? ? covale9 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.412 ? ? covale10 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.399 ? ? covale11 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 2 C BMA 3 1_555 ? ? ? ? ? ? ? 1.386 ? ? covale12 covale both ? C BMA . O3 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 4 1_555 ? ? ? ? ? ? ? 1.422 ? ? covale13 covale both ? C BMA . O6 ? ? ? 1_555 C MAN . C1 ? ? C BMA 3 C MAN 7 1_555 ? ? ? ? ? ? ? 1.407 ? ? covale14 covale both ? C MAN . O2 ? ? ? 1_555 C MAN . C1 ? ? C MAN 4 C MAN 5 1_555 ? ? ? ? ? ? ? 1.430 ? ? covale15 covale both ? C MAN . O2 ? ? ? 1_555 C MAN . C1 ? ? C MAN 5 C MAN 6 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale16 covale both ? C MAN . O3 ? ? ? 1_555 C MAN . C1 ? ? C MAN 7 C MAN 8 1_555 ? ? ? ? ? ? ? 1.415 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id PHE _struct_mon_prot_cis.label_seq_id 330 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id PHE _struct_mon_prot_cis.auth_seq_id 547 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 331 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 548 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.26 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 2 ? AA5 ? 2 ? AA6 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? anti-parallel AA6 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 278 ? SER A 281 ? GLU A 495 SER A 498 AA1 2 CYS A 18 ? LYS A 22 ? CYS A 235 LYS A 239 AA1 3 HIS A 97 ? CYS A 101 ? HIS A 314 CYS A 318 AA1 4 PHE A 322 ? LEU A 325 ? PHE A 539 LEU A 542 AA2 1 GLY A 33 ? LEU A 34 ? GLY A 250 LEU A 251 AA2 2 TYR A 84 ? TYR A 85 ? TYR A 301 TYR A 302 AA3 1 ILE A 65 ? ARG A 66 ? ILE A 282 ARG A 283 AA3 2 CYS A 237 ? TYR A 240 ? CYS A 454 TYR A 457 AA3 3 GLU A 226 ? LYS A 228 ? GLU A 443 LYS A 445 AA4 1 THR A 131 ? ILE A 132 ? THR A 348 ILE A 349 AA4 2 LYS A 135 ? LEU A 136 ? LYS A 352 LEU A 353 AA5 1 THR A 175 ? TYR A 177 ? THR A 392 TYR A 394 AA5 2 SER A 269 ? SER A 271 ? SER A 486 SER A 488 AA6 1 TYR A 220 ? ARG A 221 ? TYR A 437 ARG A 438 AA6 2 TYR A 243 ? SER A 244 ? TYR A 460 SER A 461 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 278 ? O GLU A 495 N LYS A 22 ? N LYS A 239 AA1 2 3 N VAL A 21 ? N VAL A 238 O ILE A 98 ? O ILE A 315 AA1 3 4 N LEU A 99 ? N LEU A 316 O VAL A 323 ? O VAL A 540 AA2 1 2 N LEU A 34 ? N LEU A 251 O TYR A 84 ? O TYR A 301 AA3 1 2 N ARG A 66 ? N ARG A 283 O CYS A 237 ? O CYS A 454 AA3 2 3 O LEU A 238 ? O LEU A 455 N LYS A 228 ? N LYS A 445 AA4 1 2 N ILE A 132 ? N ILE A 349 O LYS A 135 ? O LYS A 352 AA5 1 2 N TYR A 176 ? N TYR A 393 O THR A 270 ? O THR A 487 AA6 1 2 N TYR A 220 ? N TYR A 437 O SER A 244 ? O SER A 461 # _atom_sites.entry_id 8AEZ _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.010055 _atom_sites.fract_transf_matrix[1][2] 0.005805 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011611 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008291 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 218 218 ARG ARG A . n A 1 2 ASP 2 219 219 ASP ASP A . n A 1 3 GLN 3 220 220 GLN GLN A . n A 1 4 GLU 4 221 221 GLU GLU A . n A 1 5 GLN 5 222 222 GLN GLN A . n A 1 6 TYR 6 223 223 TYR TYR A . n A 1 7 ILE 7 224 224 ILE ILE A . n A 1 8 HIS 8 225 225 HIS HIS A . n A 1 9 ARG 9 226 226 ARG ARG A . n A 1 10 LYS 10 227 227 LYS LYS A . n A 1 11 CYS 11 228 228 CYS CYS A . n A 1 12 TYR 12 229 229 TYR TYR A . n A 1 13 GLN 13 230 230 GLN GLN A . n A 1 14 GLU 14 231 231 GLU GLU A . n A 1 15 PHE 15 232 232 PHE PHE A . n A 1 16 ALA 16 233 233 ALA ALA A . n A 1 17 HIS 17 234 234 HIS HIS A . n A 1 18 CYS 18 235 235 CYS CYS A . n A 1 19 TYR 19 236 236 TYR TYR A . n A 1 20 LEU 20 237 237 LEU LEU A . n A 1 21 VAL 21 238 238 VAL VAL A . n A 1 22 LYS 22 239 239 LYS LYS A . n A 1 23 TYR 23 240 240 TYR TYR A . n A 1 24 LYS 24 241 241 LYS LYS A . n A 1 25 THR 25 242 242 THR THR A . n A 1 26 PRO 26 243 243 PRO PRO A . n A 1 27 GLN 27 244 244 GLN GLN A . n A 1 28 PRO 28 245 245 PRO PRO A . n A 1 29 TRP 29 246 246 TRP TRP A . n A 1 30 PRO 30 247 247 PRO PRO A . n A 1 31 ASN 31 248 248 ASN ASN A . n A 1 32 GLU 32 249 249 GLU GLU A . n A 1 33 GLY 33 250 250 GLY GLY A . n A 1 34 LEU 34 251 251 LEU LEU A . n A 1 35 ILE 35 252 252 ILE ILE A . n A 1 36 ALA 36 253 253 ALA ALA A . n A 1 37 ASP 37 254 254 ASP ASP A . n A 1 38 GLN 38 255 255 GLN GLN A . n A 1 39 CYS 39 256 256 CYS CYS A . n A 1 40 PRO 40 257 257 PRO PRO A . n A 1 41 LEU 41 258 258 LEU LEU A . n A 1 42 PRO 42 259 259 PRO PRO A . n A 1 43 GLY 43 260 260 GLY GLY A . n A 1 44 LEU 44 261 261 LEU LEU A . n A 1 45 ALA 45 262 262 ALA ALA A . n A 1 46 ASP 46 263 263 ASP ASP A . n A 1 47 VAL 47 264 264 VAL VAL A . n A 1 48 SER 48 265 265 SER SER A . n A 1 49 PHE 49 266 266 PHE PHE A . n A 1 50 TYR 50 267 267 TYR TYR A . n A 1 51 PRO 51 268 268 PRO PRO A . n A 1 52 TYR 52 269 269 TYR TYR A . n A 1 53 GLN 53 270 270 GLN GLN A . n A 1 54 ALA 54 271 271 ALA ALA A . n A 1 55 ILE 55 272 272 ILE ILE A . n A 1 56 TRP 56 273 273 TRP TRP A . n A 1 57 ASP 57 274 274 ASP ASP A . n A 1 58 TYR 58 275 275 TYR TYR A . n A 1 59 TYR 59 276 276 TYR TYR A . n A 1 60 ALA 60 277 277 ALA ALA A . n A 1 61 LYS 61 278 278 LYS LYS A . n A 1 62 ILE 62 279 279 ILE ILE A . n A 1 63 GLU 63 280 280 GLU GLU A . n A 1 64 ASN 64 281 281 ASN ASN A . n A 1 65 ILE 65 282 282 ILE ILE A . n A 1 66 ARG 66 283 283 ARG ARG A . n A 1 67 PRO 67 284 284 PRO PRO A . n A 1 68 ALA 68 285 285 ALA ALA A . n A 1 69 ASN 69 286 286 ASN ASN A . n A 1 70 TRP 70 287 287 TRP TRP A . n A 1 71 THR 71 288 288 THR THR A . n A 1 72 SER 72 289 289 SER SER A . n A 1 73 SER 73 290 290 SER SER A . n A 1 74 LYS 74 291 291 LYS LYS A . n A 1 75 LEU 75 292 292 LEU LEU A . n A 1 76 TYR 76 293 293 TYR TYR A . n A 1 77 GLY 77 294 294 GLY GLY A . n A 1 78 LYS 78 295 295 LYS LYS A . n A 1 79 ALA 79 296 296 ALA ALA A . n A 1 80 ARG 80 297 297 ARG ARG A . n A 1 81 MET 81 298 298 MET MET A . n A 1 82 GLY 82 299 299 GLY GLY A . n A 1 83 SER 83 300 300 SER SER A . n A 1 84 TYR 84 301 301 TYR TYR A . n A 1 85 TYR 85 302 302 TYR TYR A . n A 1 86 ILE 86 303 303 ILE ILE A . n A 1 87 PRO 87 304 304 PRO PRO A . n A 1 88 LYS 88 305 305 LYS LYS A . n A 1 89 ARG 89 306 306 ARG ARG A . n A 1 90 LEU 90 307 307 LEU LEU A . n A 1 91 ARG 91 308 308 ARG ARG A . n A 1 92 ASN 92 309 309 ASN ASN A . n A 1 93 ILE 93 310 310 ILE ILE A . n A 1 94 ASN 94 311 311 ASN ASN A . n A 1 95 ASN 95 312 312 ASN ASN A . n A 1 96 THR 96 313 313 THR THR A . n A 1 97 HIS 97 314 314 HIS HIS A . n A 1 98 ILE 98 315 315 ILE ILE A . n A 1 99 LEU 99 316 316 LEU LEU A . n A 1 100 PHE 100 317 317 PHE PHE A . n A 1 101 CYS 101 318 318 CYS CYS A . n A 1 102 SER 102 319 319 SER SER A . n A 1 103 ASP 103 320 320 ASP ASP A . n A 1 104 VAL 104 321 321 VAL VAL A . n A 1 105 LEU 105 322 322 LEU LEU A . n A 1 106 TYR 106 323 323 TYR TYR A . n A 1 107 SER 107 324 324 SER SER A . n A 1 108 LYS 108 325 325 LYS LYS A . n A 1 109 TRP 109 326 326 TRP TRP A . n A 1 110 TYR 110 327 327 TYR TYR A . n A 1 111 ASN 111 328 328 ASN ASN A . n A 1 112 LEU 112 329 329 LEU LEU A . n A 1 113 GLN 113 330 330 GLN GLN A . n A 1 114 ASN 114 331 331 ASN ASN A . n A 1 115 SER 115 332 332 SER SER A . n A 1 116 ILE 116 333 333 ILE ILE A . n A 1 117 LEU 117 334 334 LEU LEU A . n A 1 118 GLN 118 335 335 GLN GLN A . n A 1 119 ASN 119 336 336 ASN ASN A . n A 1 120 GLU 120 337 337 GLU GLU A . n A 1 121 ASN 121 338 338 ASN ASN A . n A 1 122 GLU 122 339 339 GLU GLU A . n A 1 123 LEU 123 340 340 LEU LEU A . n A 1 124 THR 124 341 341 THR THR A . n A 1 125 LYS 125 342 342 LYS LYS A . n A 1 126 ARG 126 343 343 ARG ARG A . n A 1 127 LEU 127 344 344 LEU LEU A . n A 1 128 SER 128 345 345 SER SER A . n A 1 129 ASN 129 346 346 ASN ASN A . n A 1 130 LEU 130 347 347 LEU LEU A . n A 1 131 THR 131 348 348 THR THR A . n A 1 132 ILE 132 349 349 ILE ILE A . n A 1 133 GLY 133 350 350 GLY GLY A . n A 1 134 ASN 134 351 351 ASN ASN A . n A 1 135 LYS 135 352 352 LYS LYS A . n A 1 136 LEU 136 353 353 LEU LEU A . n A 1 137 LYS 137 354 354 LYS LYS A . n A 1 138 ASN 138 355 355 ASN ASN A . n A 1 139 ARG 139 356 356 ARG ARG A . n A 1 140 ALA 140 357 357 ALA ALA A . n A 1 141 LEU 141 358 358 LEU LEU A . n A 1 142 PRO 142 359 359 PRO PRO A . n A 1 143 TYR 143 360 360 TYR TYR A . n A 1 144 GLU 144 361 361 GLU GLU A . n A 1 145 TRP 145 362 362 TRP TRP A . n A 1 146 ALA 146 363 363 ALA ALA A . n A 1 147 LYS 147 364 364 LYS LYS A . n A 1 148 GLY 148 365 365 GLY GLY A . n A 1 149 GLY 149 366 366 GLY GLY A . n A 1 150 LEU 150 367 367 LEU LEU A . n A 1 151 ASN 151 368 368 ASN ASN A . n A 1 152 ARG 152 369 369 ARG ARG A . n A 1 153 LEU 153 370 370 LEU LEU A . n A 1 154 PHE 154 371 371 PHE PHE A . n A 1 155 ARG 155 372 372 ARG ARG A . n A 1 156 ASN 156 373 373 ASN ASN A . n A 1 157 ILE 157 374 374 ILE ILE A . n A 1 158 SER 158 375 375 SER SER A . n A 1 159 VAL 159 376 376 VAL VAL A . n A 1 160 LEU 160 377 377 LEU LEU A . n A 1 161 ASP 161 378 378 ASP ASP A . n A 1 162 VAL 162 379 379 VAL VAL A . n A 1 163 CYS 163 380 380 CYS CYS A . n A 1 164 SER 164 381 381 SER SER A . n A 1 165 ARG 165 382 382 ARG ARG A . n A 1 166 PRO 166 383 383 PRO PRO A . n A 1 167 GLU 167 384 384 GLU GLU A . n A 1 168 MET 168 385 385 MET MET A . n A 1 169 VAL 169 386 386 VAL VAL A . n A 1 170 LEU 170 387 387 LEU LEU A . n A 1 171 LEU 171 388 388 LEU LEU A . n A 1 172 LEU 172 389 389 LEU LEU A . n A 1 173 ASN 173 390 390 ASN ASN A . n A 1 174 LYS 174 391 391 LYS LYS A . n A 1 175 THR 175 392 392 THR THR A . n A 1 176 TYR 176 393 393 TYR TYR A . n A 1 177 TYR 177 394 394 TYR TYR A . n A 1 178 THR 178 395 395 THR THR A . n A 1 179 PHE 179 396 396 PHE PHE A . n A 1 180 SER 180 397 397 SER SER A . n A 1 181 LEU 181 398 398 LEU LEU A . n A 1 182 TRP 182 399 399 TRP TRP A . n A 1 183 GLU 183 400 400 GLU GLU A . n A 1 184 GLY 184 401 401 GLY GLY A . n A 1 185 ASP 185 402 402 ASP ASP A . n A 1 186 CYS 186 403 403 CYS CYS A . n A 1 187 ASN 187 404 404 ASN ASN A . n A 1 188 ILE 188 405 405 ILE ILE A . n A 1 189 THR 189 406 406 THR THR A . n A 1 190 ARG 190 407 407 ARG ARG A . n A 1 191 TYR 191 408 408 TYR TYR A . n A 1 192 ASN 192 409 409 ASN ASN A . n A 1 193 VAL 193 410 410 VAL VAL A . n A 1 194 ASN 194 411 411 ASN ASN A . n A 1 195 GLU 195 412 412 GLU GLU A . n A 1 196 THR 196 413 413 THR THR A . n A 1 197 VAL 197 414 414 VAL VAL A . n A 1 198 PRO 198 415 415 PRO PRO A . n A 1 199 GLU 199 416 416 GLU GLU A . n A 1 200 CYS 200 417 417 CYS CYS A . n A 1 201 LYS 201 418 418 LYS LYS A . n A 1 202 ASP 202 419 419 ASP ASP A . n A 1 203 PHE 203 420 ? ? ? A . n A 1 204 PRO 204 421 ? ? ? A . n A 1 205 HIS 205 422 ? ? ? A . n A 1 206 ARG 206 423 ? ? ? A . n A 1 207 ARG 207 424 ? ? ? A . n A 1 208 PHE 208 425 ? ? ? A . n A 1 209 ASN 209 426 ? ? ? A . n A 1 210 ASP 210 427 427 ASP ASP A . n A 1 211 HIS 211 428 428 HIS HIS A . n A 1 212 PRO 212 429 429 PRO PRO A . n A 1 213 TYR 213 430 430 TYR TYR A . n A 1 214 SER 214 431 431 SER SER A . n A 1 215 CYS 215 432 432 CYS CYS A . n A 1 216 ARG 216 433 433 ARG ARG A . n A 1 217 LEU 217 434 434 LEU LEU A . n A 1 218 TRP 218 435 435 TRP TRP A . n A 1 219 ARG 219 436 436 ARG ARG A . n A 1 220 TYR 220 437 437 TYR TYR A . n A 1 221 ARG 221 438 438 ARG ARG A . n A 1 222 GLU 222 439 439 GLU GLU A . n A 1 223 GLY 223 440 440 GLY GLY A . n A 1 224 LYS 224 441 441 LYS LYS A . n A 1 225 GLU 225 442 442 GLU GLU A . n A 1 226 GLU 226 443 443 GLU GLU A . n A 1 227 VAL 227 444 444 VAL VAL A . n A 1 228 LYS 228 445 445 LYS LYS A . n A 1 229 CYS 229 446 446 CYS CYS A . n A 1 230 LEU 230 447 447 LEU LEU A . n A 1 231 THR 231 448 448 THR THR A . n A 1 232 SER 232 449 449 SER SER A . n A 1 233 ASP 233 450 450 ASP ASP A . n A 1 234 HIS 234 451 451 HIS HIS A . n A 1 235 THR 235 452 452 THR THR A . n A 1 236 ARG 236 453 453 ARG ARG A . n A 1 237 CYS 237 454 454 CYS CYS A . n A 1 238 LEU 238 455 455 LEU LEU A . n A 1 239 TYR 239 456 456 TYR TYR A . n A 1 240 TYR 240 457 457 TYR TYR A . n A 1 241 PRO 241 458 458 PRO PRO A . n A 1 242 GLU 242 459 459 GLU GLU A . n A 1 243 TYR 243 460 460 TYR TYR A . n A 1 244 SER 244 461 461 SER SER A . n A 1 245 ASN 245 462 462 ASN ASN A . n A 1 246 PRO 246 463 463 PRO PRO A . n A 1 247 GLU 247 464 464 GLU GLU A . n A 1 248 ALA 248 465 465 ALA ALA A . n A 1 249 LEU 249 466 466 LEU LEU A . n A 1 250 PHE 250 467 467 PHE PHE A . n A 1 251 ASP 251 468 468 ASP ASP A . n A 1 252 PHE 252 469 469 PHE PHE A . n A 1 253 GLY 253 470 470 GLY GLY A . n A 1 254 PHE 254 471 471 PHE PHE A . n A 1 255 LEU 255 472 472 LEU LEU A . n A 1 256 SER 256 473 473 SER SER A . n A 1 257 TYR 257 474 474 TYR TYR A . n A 1 258 MET 258 475 475 MET MET A . n A 1 259 ARG 259 476 476 ARG ARG A . n A 1 260 ASN 260 477 477 ASN ASN A . n A 1 261 PHE 261 478 478 PHE PHE A . n A 1 262 PRO 262 479 479 PRO PRO A . n A 1 263 GLY 263 480 480 GLY GLY A . n A 1 264 PRO 264 481 481 PRO PRO A . n A 1 265 GLN 265 482 482 GLN GLN A . n A 1 266 CYS 266 483 483 CYS CYS A . n A 1 267 ILE 267 484 484 ILE ILE A . n A 1 268 GLU 268 485 485 GLU GLU A . n A 1 269 SER 269 486 486 SER SER A . n A 1 270 THR 270 487 487 THR THR A . n A 1 271 SER 271 488 488 SER SER A . n A 1 272 ILE 272 489 489 ILE ILE A . n A 1 273 ARG 273 490 490 ARG ARG A . n A 1 274 GLN 274 491 491 GLN GLN A . n A 1 275 GLN 275 492 492 GLN GLN A . n A 1 276 ASP 276 493 493 ASP ASP A . n A 1 277 TYR 277 494 494 TYR TYR A . n A 1 278 GLU 278 495 495 GLU GLU A . n A 1 279 VAL 279 496 496 VAL VAL A . n A 1 280 TYR 280 497 497 TYR TYR A . n A 1 281 SER 281 498 498 SER SER A . n A 1 282 ILE 282 499 499 ILE ILE A . n A 1 283 TYR 283 500 500 TYR TYR A . n A 1 284 GLN 284 501 501 GLN GLN A . n A 1 285 GLU 285 502 502 GLU GLU A . n A 1 286 CYS 286 503 503 CYS CYS A . n A 1 287 LYS 287 504 504 LYS LYS A . n A 1 288 LEU 288 505 505 LEU LEU A . n A 1 289 ALA 289 506 506 ALA ALA A . n A 1 290 SER 290 507 507 SER SER A . n A 1 291 LYS 291 508 508 LYS LYS A . n A 1 292 THR 292 509 509 THR THR A . n A 1 293 TYR 293 510 510 TYR TYR A . n A 1 294 GLY 294 511 511 GLY GLY A . n A 1 295 ILE 295 512 512 ILE ILE A . n A 1 296 ASP 296 513 513 ASP ASP A . n A 1 297 SER 297 514 514 SER SER A . n A 1 298 VAL 298 515 515 VAL VAL A . n A 1 299 LEU 299 516 516 LEU LEU A . n A 1 300 PHE 300 517 517 PHE PHE A . n A 1 301 SER 301 518 518 SER SER A . n A 1 302 LEU 302 519 519 LEU LEU A . n A 1 303 LYS 303 520 520 LYS LYS A . n A 1 304 ASN 304 521 521 ASN ASN A . n A 1 305 PHE 305 522 522 PHE PHE A . n A 1 306 LEU 306 523 523 LEU LEU A . n A 1 307 ASN 307 524 524 ASN ASN A . n A 1 308 TYR 308 525 525 TYR TYR A . n A 1 309 THR 309 526 526 THR THR A . n A 1 310 GLY 310 527 527 GLY GLY A . n A 1 311 LYS 311 528 528 LYS LYS A . n A 1 312 PRO 312 529 529 PRO PRO A . n A 1 313 VAL 313 530 530 VAL VAL A . n A 1 314 ASN 314 531 531 ASN ASN A . n A 1 315 GLU 315 532 532 GLU GLU A . n A 1 316 MET 316 533 533 MET MET A . n A 1 317 PRO 317 534 534 PRO PRO A . n A 1 318 ASN 318 535 535 ASN ASN A . n A 1 319 ALA 319 536 536 ALA ALA A . n A 1 320 ARG 320 537 537 ARG ARG A . n A 1 321 ALA 321 538 538 ALA ALA A . n A 1 322 PHE 322 539 539 PHE PHE A . n A 1 323 VAL 323 540 540 VAL VAL A . n A 1 324 GLY 324 541 541 GLY GLY A . n A 1 325 LEU 325 542 542 LEU LEU A . n A 1 326 ILE 326 543 543 ILE ILE A . n A 1 327 ASP 327 544 544 ASP ASP A . n A 1 328 PRO 328 545 545 PRO PRO A . n A 1 329 LYS 329 546 546 LYS LYS A . n A 1 330 PHE 330 547 547 PHE PHE A . n A 1 331 PRO 331 548 548 PRO PRO A . n A 1 332 PRO 332 549 549 PRO PRO A . n A 1 333 THR 333 550 550 THR THR A . n A 1 334 TYR 334 551 551 TYR TYR A . n A 1 335 PRO 335 552 552 PRO PRO A . n A 1 336 ASP 336 553 ? ? ? A . n A 1 337 ASP 337 554 ? ? ? A . n A 1 338 ASP 338 555 ? ? ? A . n A 1 339 ASP 339 556 ? ? ? A . n A 1 340 LYS 340 557 ? ? ? A . n # _pdbx_contact_author.id 3 _pdbx_contact_author.email marija@pasteur.fr _pdbx_contact_author.name_first Marija _pdbx_contact_author.name_last Backovic _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-8814-4428 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 601 1347 NAG NAG A . E 4 NAG 1 602 1312 NAG NAG A . F 4 NAG 1 603 1405 NAG NAG A . G 4 NAG 1 604 1525 NAG NAG A . H 4 NAG 1 605 1287 NAG NAG A . I 5 HOH 1 701 18 HOH HOH A . I 5 HOH 2 702 17 HOH HOH A . I 5 HOH 3 703 30 HOH HOH A . I 5 HOH 4 704 23 HOH HOH A . I 5 HOH 5 705 22 HOH HOH A . I 5 HOH 6 706 11 HOH HOH A . I 5 HOH 7 707 26 HOH HOH A . I 5 HOH 8 708 31 HOH HOH A . I 5 HOH 9 709 7 HOH HOH A . I 5 HOH 10 710 25 HOH HOH A . I 5 HOH 11 711 6 HOH HOH A . I 5 HOH 12 712 3 HOH HOH A . I 5 HOH 13 713 8 HOH HOH A . I 5 HOH 14 714 2 HOH HOH A . I 5 HOH 15 715 28 HOH HOH A . I 5 HOH 16 716 19 HOH HOH A . I 5 HOH 17 717 16 HOH HOH A . I 5 HOH 18 718 10 HOH HOH A . I 5 HOH 19 719 4 HOH HOH A . I 5 HOH 20 720 9 HOH HOH A . I 5 HOH 21 721 21 HOH HOH A . I 5 HOH 22 722 1 HOH HOH A . I 5 HOH 23 723 20 HOH HOH A . I 5 HOH 24 724 29 HOH HOH A . I 5 HOH 25 725 13 HOH HOH A . I 5 HOH 26 726 15 HOH HOH A . I 5 HOH 27 727 5 HOH HOH A . I 5 HOH 28 728 12 HOH HOH A . I 5 HOH 29 729 14 HOH HOH A . I 5 HOH 30 730 27 HOH HOH A . I 5 HOH 31 731 24 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-22 2 'Structure model' 1 1 2023-03-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.journal_volume' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation.year' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method ? _pdbx_refine_tls.origin_x -22.1361 _pdbx_refine_tls.origin_y -36.3317 _pdbx_refine_tls.origin_z 18.3941 _pdbx_refine_tls.T[1][1] -0.0924 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0031 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0474 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.0644 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0598 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] -0.0778 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 3.0074 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] -1.3078 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 1.099 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 0.8424 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -0.7704 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 1.9227 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0412 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.055 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] -0.11 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.055 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] 0.0847 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.1245 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.11 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.1245 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.1259 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details '{ A|* }' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.3 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? ` 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _pdbx_entry_details.entry_id 8AEZ _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 300 ? ? -109.92 -141.58 2 1 ARG A 308 ? ? -144.05 59.41 3 1 LYS A 325 ? ? -45.82 -18.98 4 1 LEU A 370 ? ? -122.58 -58.00 5 1 CYS A 403 ? ? 56.59 19.14 6 1 LYS A 418 ? ? -166.68 55.61 7 1 TRP A 435 ? ? -95.97 -61.33 8 1 MET A 475 ? ? -69.13 12.16 9 1 GLN A 492 ? ? 75.97 150.37 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 218 ? CG ? A ARG 1 CG 2 1 Y 1 A ARG 218 ? CD ? A ARG 1 CD 3 1 Y 1 A ARG 218 ? NE ? A ARG 1 NE 4 1 Y 1 A ARG 218 ? CZ ? A ARG 1 CZ 5 1 Y 1 A ARG 218 ? NH1 ? A ARG 1 NH1 6 1 Y 1 A ARG 218 ? NH2 ? A ARG 1 NH2 7 1 Y 1 A ARG 476 ? CG ? A ARG 259 CG 8 1 Y 1 A ARG 476 ? CD ? A ARG 259 CD 9 1 Y 1 A ARG 476 ? NE ? A ARG 259 NE 10 1 Y 1 A ARG 476 ? CZ ? A ARG 259 CZ 11 1 Y 1 A ARG 476 ? NH1 ? A ARG 259 NH1 12 1 Y 1 A ARG 476 ? NH2 ? A ARG 259 NH2 13 1 Y 1 A TYR 525 ? CG ? A TYR 308 CG 14 1 Y 1 A TYR 525 ? CD1 ? A TYR 308 CD1 15 1 Y 1 A TYR 525 ? CD2 ? A TYR 308 CD2 16 1 Y 1 A TYR 525 ? CE1 ? A TYR 308 CE1 17 1 Y 1 A TYR 525 ? CE2 ? A TYR 308 CE2 18 1 Y 1 A TYR 525 ? CZ ? A TYR 308 CZ 19 1 Y 1 A TYR 525 ? OH ? A TYR 308 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PHE 420 ? A PHE 203 2 1 Y 1 A PRO 421 ? A PRO 204 3 1 Y 1 A HIS 422 ? A HIS 205 4 1 Y 1 A ARG 423 ? A ARG 206 5 1 Y 1 A ARG 424 ? A ARG 207 6 1 Y 1 A PHE 425 ? A PHE 208 7 1 Y 1 A ASN 426 ? A ASN 209 8 1 Y 1 A ASP 553 ? A ASP 336 9 1 Y 1 A ASP 554 ? A ASP 337 10 1 Y 1 A ASP 555 ? A ASP 338 11 1 Y 1 A ASP 556 ? A ASP 339 12 1 Y 1 A LYS 557 ? A LYS 340 # _pdbx_audit_support.funding_organization 'Laboratories of Excellence (LabEx)' _pdbx_audit_support.country France _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1374 n B 2 NAG 2 B NAG 2 A NAG 1375 n B 2 BMA 3 B BMA 3 A BMA 1376 n C 3 NAG 1 C NAG 1 A NAG 1391 n C 3 NAG 2 C NAG 2 A NAG 1392 n C 3 BMA 3 C BMA 3 A BMA 1393 n C 3 MAN 4 C MAN 4 A MAN 1397 n C 3 MAN 5 C MAN 5 A MAN 1398 n C 3 MAN 6 C MAN 6 A MAN 1399 n C 3 MAN 7 C MAN 7 A MAN 1394 n C 3 MAN 8 C MAN 8 A MAN 1395 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? 4 3 'DManpa1-2DManpa1-2DManpa1-3[DManpa1-3DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/3,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3-3-3/a4-b1_b4-c1_c3-d1_c6-g1_d2-e1_e2-f1_g3-h1' WURCS PDB2Glycan 1.1.0 6 3 ;[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-Manp]{[(2+1)][a-D-Manp]{}}}[(6+1)][a-D-Manp]{[(3+1)][a-D-Manp]{}}}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? 4 3 3 BMA C1 O1 2 NAG O4 HO4 sing ? 5 3 4 MAN C1 O1 3 BMA O3 HO3 sing ? 6 3 5 MAN C1 O1 4 MAN O2 HO2 sing ? 7 3 6 MAN C1 O1 5 MAN O2 HO2 sing ? 8 3 7 MAN C1 O1 3 BMA O6 HO6 sing ? 9 3 8 MAN C1 O1 7 MAN O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 3 NAG 1 n 3 NAG 2 n 3 BMA 3 n 3 MAN 4 n 3 MAN 5 n 3 MAN 6 n 3 MAN 7 n 3 MAN 8 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #