HEADER BIOSYNTHETIC PROTEIN 25-JUL-22 8AHZ TITLE NATIVE VIRD OF STREPTOMYCES VIRGINIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENOYL-COA HYDRATASE; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES VIRGINIAE; SOURCE 3 ORGANISM_TAXID: 1961; SOURCE 4 GENE: VIRD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PBG102 KEYWDS ENOYL-COA HYDRATASE, BETA-METHYLATION, ANTIBIOTIC, ACP, POLYKETIDE, KEYWDS 2 PKS, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.COLLIN,A.GRUEZ REVDAT 2 22-MAR-23 8AHZ 1 JRNL REVDAT 1 15-MAR-23 8AHZ 0 JRNL AUTH S.COLLIN,R.J.COX,C.PARIS,C.JACOB,B.CHAGOT,K.J.WEISSMAN, JRNL AUTH 2 A.GRUEZ JRNL TITL DECRYPTING THE PROGRAMMING OF BETA-METHYLATION IN JRNL TITL 2 VIRGINIAMYCIN M BIOSYNTHESIS. JRNL REF NAT COMMUN V. 14 1327 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 36899003 JRNL DOI 10.1038/S41467-023-36974-3 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 87602 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 4525 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6365 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2470 REMARK 3 BIN FREE R VALUE SET COUNT : 307 REMARK 3 BIN FREE R VALUE : 0.2850 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5090 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 152 REMARK 3 SOLVENT ATOMS : 438 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.67000 REMARK 3 B22 (A**2) : 0.67000 REMARK 3 B33 (A**2) : -1.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.083 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.080 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.045 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.737 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.964 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5459 ; 0.009 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 5484 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7365 ; 1.517 ; 1.665 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12497 ; 1.429 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 725 ; 5.921 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 322 ;24.045 ;17.391 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 839 ;11.284 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 92 ;16.686 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 691 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6214 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1334 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -3 A 240 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0187 39.0256 15.9650 REMARK 3 T TENSOR REMARK 3 T11: 0.0388 T22: 0.0231 REMARK 3 T33: 0.0293 T12: 0.0043 REMARK 3 T13: -0.0030 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.5950 L22: 0.3395 REMARK 3 L33: 0.9332 L12: 0.0374 REMARK 3 L13: -0.1758 L23: -0.2501 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.0483 S13: -0.0178 REMARK 3 S21: -0.0166 S22: 0.0078 S23: 0.0599 REMARK 3 S31: 0.0266 S32: -0.1278 S33: -0.0415 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -3 B 229 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2955 31.8883 47.7380 REMARK 3 T TENSOR REMARK 3 T11: 0.0654 T22: 0.0131 REMARK 3 T33: 0.0304 T12: -0.0166 REMARK 3 T13: 0.0149 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.6891 L22: 0.5121 REMARK 3 L33: 0.8072 L12: 0.3113 REMARK 3 L13: 0.0649 L23: -0.0274 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: -0.0679 S13: 0.0188 REMARK 3 S21: 0.1039 S22: -0.0224 S23: 0.0368 REMARK 3 S31: -0.0207 S32: -0.0270 S33: -0.0114 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -3 C 233 REMARK 3 ORIGIN FOR THE GROUP (A): 51.0562 42.5749 30.7295 REMARK 3 T TENSOR REMARK 3 T11: 0.0067 T22: 0.0700 REMARK 3 T33: 0.0375 T12: -0.0069 REMARK 3 T13: 0.0052 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.3632 L22: 0.6500 REMARK 3 L33: 1.2425 L12: 0.0941 REMARK 3 L13: 0.1407 L23: -0.1743 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: 0.0174 S13: -0.0224 REMARK 3 S21: -0.0019 S22: -0.0443 S23: -0.0982 REMARK 3 S31: -0.0126 S32: 0.2332 S33: 0.0052 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 8AHZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292124539. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-17 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953709 REMARK 200 MONOCHROMATOR : CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87602 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 59.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.60 REMARK 200 R MERGE (I) : 0.07100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.76 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 85.9 REMARK 200 DATA REDUNDANCY IN SHELL : 11.60 REMARK 200 R MERGE FOR SHELL (I) : 0.75300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 400, 20% PEG 800, 100 MM TRIS REMARK 280 -HCL, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 115.09500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 42.15500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 42.15500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 57.54750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 42.15500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 42.15500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 172.64250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 42.15500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 42.15500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 57.54750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 42.15500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 42.15500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 172.64250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 115.09500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 62 REMARK 465 SER A 63 REMARK 465 GLY A 64 REMARK 465 GLY A 65 REMARK 465 ASP A 66 REMARK 465 PRO A 67 REMARK 465 ALA A 68 REMARK 465 PRO A 69 REMARK 465 GLU A 70 REMARK 465 PRO A 71 REMARK 465 ARG A 240 REMARK 465 GLU A 241 REMARK 465 ALA A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 ALA A 245 REMARK 465 ALA A 246 REMARK 465 GLY B 64 REMARK 465 GLY B 65 REMARK 465 ASP B 66 REMARK 465 PRO B 67 REMARK 465 ALA B 68 REMARK 465 PRO B 69 REMARK 465 GLU B 70 REMARK 465 PHE B 227 REMARK 465 ALA B 228 REMARK 465 ALA B 229 REMARK 465 PRO B 230 REMARK 465 GLY B 231 REMARK 465 THR B 232 REMARK 465 GLY B 233 REMARK 465 GLN B 234 REMARK 465 LEU B 235 REMARK 465 LEU B 236 REMARK 465 ALA B 237 REMARK 465 ARG B 238 REMARK 465 LEU B 239 REMARK 465 ARG B 240 REMARK 465 GLU B 241 REMARK 465 ALA B 242 REMARK 465 GLY B 243 REMARK 465 ALA B 244 REMARK 465 ALA B 245 REMARK 465 ALA B 246 REMARK 465 SER C 63 REMARK 465 GLY C 64 REMARK 465 GLY C 65 REMARK 465 ASP C 66 REMARK 465 PRO C 67 REMARK 465 ALA C 68 REMARK 465 PRO C 69 REMARK 465 GLU C 70 REMARK 465 PRO C 71 REMARK 465 GLN C 234 REMARK 465 LEU C 235 REMARK 465 LEU C 236 REMARK 465 ALA C 237 REMARK 465 ARG C 238 REMARK 465 LEU C 239 REMARK 465 ARG C 240 REMARK 465 GLU C 241 REMARK 465 ALA C 242 REMARK 465 GLY C 243 REMARK 465 ALA C 244 REMARK 465 ALA C 245 REMARK 465 ALA C 246 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 7 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 7 CG CD NE CZ NH1 NH2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 33 CD NE CZ NH1 NH2 REMARK 480 ALA A 237 O CB REMARK 480 LEU B 223 CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 104 -127.40 56.01 REMARK 500 THR A 193 -160.00 -117.51 REMARK 500 ALA B 104 -126.10 57.82 REMARK 500 THR B 193 -165.34 -115.28 REMARK 500 CYS C 57 119.51 -168.88 REMARK 500 ALA C 104 -123.23 54.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8AHQ RELATED DB: PDB DBREF 8AHZ A 2 246 UNP A4PHM7 A4PHM7_STRVG 2 246 DBREF 8AHZ B 2 246 UNP A4PHM7 A4PHM7_STRVG 2 246 DBREF 8AHZ C 2 246 UNP A4PHM7 A4PHM7_STRVG 2 246 SEQADV 8AHZ GLY A -3 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ PRO A -2 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ GLY A -1 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ SER A 0 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ VAL A 1 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ GLY B -3 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ PRO B -2 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ GLY B -1 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ SER B 0 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ VAL B 1 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ GLY C -3 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ PRO C -2 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ GLY C -1 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ SER C 0 UNP A4PHM7 EXPRESSION TAG SEQADV 8AHZ VAL C 1 UNP A4PHM7 EXPRESSION TAG SEQRES 1 A 250 GLY PRO GLY SER VAL ARG VAL VAL ARG GLY ARG GLY LEU SEQRES 2 A 250 LEU ARG ALA VAL LEU ASP ARG PRO GLU ARG ARG ASN PRO SEQRES 3 A 250 ILE ASP ALA GLY LEU LEU THR SER LEU ALA ARG ALA LEU SEQRES 4 A 250 ASP GLN ALA GLU SER ASP GLN ASP CYS ARG VAL PHE VAL SEQRES 5 A 250 LEU SER SER THR GLY GLU ASP PHE CYS ALA GLY THR ASP SEQRES 6 A 250 LEU SER GLY GLY ASP PRO ALA PRO GLU PRO LEU PRO ASP SEQRES 7 A 250 GLY ALA GLU LEU PRO TYR TRP THR LEU LEU GLU ARG LEU SEQRES 8 A 250 THR ARG SER PRO LEU ALA THR VAL ALA VAL VAL ASP GLY SEQRES 9 A 250 ARG ALA THR ALA GLY GLY VAL GLY LEU ALA ALA ALA CYS SEQRES 10 A 250 ASP LEU VAL LEU ALA GLY GLU ARG ALA ARG PHE ARG LEU SEQRES 11 A 250 THR GLU VAL LEU ALA GLY LEU VAL PRO ALA MSE ALA LEU SEQRES 12 A 250 PRO PHE VAL ALA ARG ARG THR GLY GLU GLN ARG ALA PHE SEQRES 13 A 250 ALA ALA THR LEU ARG ALA GLU GLU PHE ASP ALA GLY ALA SEQRES 14 A 250 ALA HIS ARG VAL GLY LEU ALA ASP LEU ALA GLY PRO ARG SEQRES 15 A 250 ALA GLU ASP LEU LEU PRO PRO VAL LEU ALA GLY LEU GLY SEQRES 16 A 250 ARG THR ASP ARG SER THR THR ALA ALA LEU LYS GLU TYR SEQRES 17 A 250 ARG ALA ARG LEU PHE PRO ARG ASP ALA ARG LEU GLY HIS SEQRES 18 A 250 ASP ALA SER ARG LEU LEU ILE GLU ARG PHE ALA ALA PRO SEQRES 19 A 250 GLY THR GLY GLN LEU LEU ALA ARG LEU ARG GLU ALA GLY SEQRES 20 A 250 ALA ALA ALA SEQRES 1 B 250 GLY PRO GLY SER VAL ARG VAL VAL ARG GLY ARG GLY LEU SEQRES 2 B 250 LEU ARG ALA VAL LEU ASP ARG PRO GLU ARG ARG ASN PRO SEQRES 3 B 250 ILE ASP ALA GLY LEU LEU THR SER LEU ALA ARG ALA LEU SEQRES 4 B 250 ASP GLN ALA GLU SER ASP GLN ASP CYS ARG VAL PHE VAL SEQRES 5 B 250 LEU SER SER THR GLY GLU ASP PHE CYS ALA GLY THR ASP SEQRES 6 B 250 LEU SER GLY GLY ASP PRO ALA PRO GLU PRO LEU PRO ASP SEQRES 7 B 250 GLY ALA GLU LEU PRO TYR TRP THR LEU LEU GLU ARG LEU SEQRES 8 B 250 THR ARG SER PRO LEU ALA THR VAL ALA VAL VAL ASP GLY SEQRES 9 B 250 ARG ALA THR ALA GLY GLY VAL GLY LEU ALA ALA ALA CYS SEQRES 10 B 250 ASP LEU VAL LEU ALA GLY GLU ARG ALA ARG PHE ARG LEU SEQRES 11 B 250 THR GLU VAL LEU ALA GLY LEU VAL PRO ALA MSE ALA LEU SEQRES 12 B 250 PRO PHE VAL ALA ARG ARG THR GLY GLU GLN ARG ALA PHE SEQRES 13 B 250 ALA ALA THR LEU ARG ALA GLU GLU PHE ASP ALA GLY ALA SEQRES 14 B 250 ALA HIS ARG VAL GLY LEU ALA ASP LEU ALA GLY PRO ARG SEQRES 15 B 250 ALA GLU ASP LEU LEU PRO PRO VAL LEU ALA GLY LEU GLY SEQRES 16 B 250 ARG THR ASP ARG SER THR THR ALA ALA LEU LYS GLU TYR SEQRES 17 B 250 ARG ALA ARG LEU PHE PRO ARG ASP ALA ARG LEU GLY HIS SEQRES 18 B 250 ASP ALA SER ARG LEU LEU ILE GLU ARG PHE ALA ALA PRO SEQRES 19 B 250 GLY THR GLY GLN LEU LEU ALA ARG LEU ARG GLU ALA GLY SEQRES 20 B 250 ALA ALA ALA SEQRES 1 C 250 GLY PRO GLY SER VAL ARG VAL VAL ARG GLY ARG GLY LEU SEQRES 2 C 250 LEU ARG ALA VAL LEU ASP ARG PRO GLU ARG ARG ASN PRO SEQRES 3 C 250 ILE ASP ALA GLY LEU LEU THR SER LEU ALA ARG ALA LEU SEQRES 4 C 250 ASP GLN ALA GLU SER ASP GLN ASP CYS ARG VAL PHE VAL SEQRES 5 C 250 LEU SER SER THR GLY GLU ASP PHE CYS ALA GLY THR ASP SEQRES 6 C 250 LEU SER GLY GLY ASP PRO ALA PRO GLU PRO LEU PRO ASP SEQRES 7 C 250 GLY ALA GLU LEU PRO TYR TRP THR LEU LEU GLU ARG LEU SEQRES 8 C 250 THR ARG SER PRO LEU ALA THR VAL ALA VAL VAL ASP GLY SEQRES 9 C 250 ARG ALA THR ALA GLY GLY VAL GLY LEU ALA ALA ALA CYS SEQRES 10 C 250 ASP LEU VAL LEU ALA GLY GLU ARG ALA ARG PHE ARG LEU SEQRES 11 C 250 THR GLU VAL LEU ALA GLY LEU VAL PRO ALA MSE ALA LEU SEQRES 12 C 250 PRO PHE VAL ALA ARG ARG THR GLY GLU GLN ARG ALA PHE SEQRES 13 C 250 ALA ALA THR LEU ARG ALA GLU GLU PHE ASP ALA GLY ALA SEQRES 14 C 250 ALA HIS ARG VAL GLY LEU ALA ASP LEU ALA GLY PRO ARG SEQRES 15 C 250 ALA GLU ASP LEU LEU PRO PRO VAL LEU ALA GLY LEU GLY SEQRES 16 C 250 ARG THR ASP ARG SER THR THR ALA ALA LEU LYS GLU TYR SEQRES 17 C 250 ARG ALA ARG LEU PHE PRO ARG ASP ALA ARG LEU GLY HIS SEQRES 18 C 250 ASP ALA SER ARG LEU LEU ILE GLU ARG PHE ALA ALA PRO SEQRES 19 C 250 GLY THR GLY GLN LEU LEU ALA ARG LEU ARG GLU ALA GLY SEQRES 20 C 250 ALA ALA ALA MODRES 8AHZ MSE A 137 MET MODIFIED RESIDUE MODRES 8AHZ MSE B 137 MET MODIFIED RESIDUE MODRES 8AHZ MSE C 137 MET MODIFIED RESIDUE HET MSE A 137 8 HET MSE B 137 8 HET MSE C 137 8 HET EDO A 301 4 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET EDO A 310 4 HET EDO A 311 4 HET EDO A 312 4 HET EDO A 313 4 HET EDO A 314 4 HET EDO A 315 4 HET IMD A 316 5 HET CL A 317 1 HET EDO B 301 4 HET EDO B 302 4 HET EDO B 303 4 HET EDO B 304 4 HET EDO B 305 4 HET EDO B 306 4 HET EDO B 307 4 HET EDO B 308 4 HET EDO B 309 4 HET EDO B 310 4 HET EDO B 311 4 HET CL B 312 1 HET EDO C 301 4 HET EDO C 302 4 HET EDO C 303 4 HET EDO C 304 4 HET EDO C 305 4 HET EDO C 306 4 HET EDO C 307 4 HET EDO C 308 4 HET EDO C 309 4 HET EDO C 310 4 HET CL C 311 1 HETNAM MSE SELENOMETHIONINE HETNAM EDO 1,2-ETHANEDIOL HETNAM IMD IMIDAZOLE HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 3(C5 H11 N O2 SE) FORMUL 4 EDO 36(C2 H6 O2) FORMUL 19 IMD C3 H5 N2 1+ FORMUL 20 CL 3(CL 1-) FORMUL 44 HOH *438(H2 O) HELIX 1 AA1 ARG A 16 ARG A 20 5 5 HELIX 2 AA2 ASP A 24 ASP A 41 1 18 HELIX 3 AA3 LEU A 78 SER A 90 1 13 HELIX 4 AA4 ALA A 104 ALA A 112 1 9 HELIX 5 AA5 THR A 127 GLY A 132 5 6 HELIX 6 AA6 ALA A 138 GLY A 147 1 10 HELIX 7 AA7 GLY A 147 ALA A 158 1 12 HELIX 8 AA8 ALA A 163 VAL A 169 1 7 HELIX 9 AA9 ARG A 178 GLY A 191 1 14 HELIX 10 AB1 ASP A 194 PHE A 209 1 16 HELIX 11 AB2 ARG A 214 ALA A 228 1 15 HELIX 12 AB3 ALA A 229 LEU A 239 1 11 HELIX 13 AB4 ARG B 16 ARG B 20 5 5 HELIX 14 AB5 ASP B 24 ASP B 41 1 18 HELIX 15 AB6 LEU B 78 SER B 90 1 13 HELIX 16 AB7 ALA B 104 ALA B 112 1 9 HELIX 17 AB8 THR B 127 GLY B 132 5 6 HELIX 18 AB9 ALA B 138 GLY B 147 1 10 HELIX 19 AC1 GLY B 147 ALA B 158 1 12 HELIX 20 AC2 ALA B 163 VAL B 169 1 7 HELIX 21 AC3 ARG B 178 GLY B 191 1 14 HELIX 22 AC4 ASP B 194 PHE B 209 1 16 HELIX 23 AC5 ARG B 214 ARG B 226 1 13 HELIX 24 AC6 ARG C 16 ARG C 20 5 5 HELIX 25 AC7 ASP C 24 ASP C 41 1 18 HELIX 26 AC8 LEU C 78 SER C 90 1 13 HELIX 27 AC9 ALA C 104 ALA C 112 1 9 HELIX 28 AD1 THR C 127 GLY C 132 5 6 HELIX 29 AD2 ALA C 138 GLY C 147 1 10 HELIX 30 AD3 GLY C 147 ALA C 158 1 12 HELIX 31 AD4 ALA C 163 VAL C 169 1 7 HELIX 32 AD5 ARG C 178 GLY C 191 1 14 HELIX 33 AD6 ASP C 194 PHE C 209 1 16 HELIX 34 AD7 ARG C 214 ALA C 228 1 15 HELIX 35 AD8 ALA C 229 GLY C 233 5 5 SHEET 1 AA1 6 VAL A 1 GLY A 6 0 SHEET 2 AA1 6 LEU A 9 LEU A 14 -1 O VAL A 13 N ARG A 2 SHEET 3 AA1 6 VAL A 46 SER A 50 1 O SER A 50 N LEU A 14 SHEET 4 AA1 6 ALA A 93 VAL A 98 1 O VAL A 97 N LEU A 49 SHEET 5 AA1 6 LEU A 115 ALA A 118 1 O LEU A 117 N ALA A 96 SHEET 6 AA1 6 LEU A 174 ALA A 175 1 O LEU A 174 N ALA A 118 SHEET 1 AA2 2 PRO A 22 ILE A 23 0 SHEET 2 AA2 2 GLY A 59 THR A 60 1 O GLY A 59 N ILE A 23 SHEET 1 AA3 4 ASP A 55 CYS A 57 0 SHEET 2 AA3 4 ARG A 101 THR A 103 1 O THR A 103 N CYS A 57 SHEET 3 AA3 4 ARG A 123 ARG A 125 1 O ARG A 123 N ALA A 102 SHEET 4 AA3 4 GLU A 160 ASP A 162 -1 O PHE A 161 N PHE A 124 SHEET 1 AA4 6 VAL B 1 GLY B 6 0 SHEET 2 AA4 6 LEU B 9 LEU B 14 -1 O ARG B 11 N VAL B 4 SHEET 3 AA4 6 VAL B 46 SER B 50 1 O VAL B 48 N ALA B 12 SHEET 4 AA4 6 ALA B 93 VAL B 98 1 O ALA B 93 N PHE B 47 SHEET 5 AA4 6 LEU B 115 ALA B 118 1 O LEU B 117 N VAL B 98 SHEET 6 AA4 6 LEU B 174 ALA B 175 1 O LEU B 174 N ALA B 118 SHEET 1 AA5 2 PRO B 22 ILE B 23 0 SHEET 2 AA5 2 GLY B 59 THR B 60 1 O GLY B 59 N ILE B 23 SHEET 1 AA6 4 ASP B 55 CYS B 57 0 SHEET 2 AA6 4 ARG B 101 THR B 103 1 O THR B 103 N CYS B 57 SHEET 3 AA6 4 ARG B 123 ARG B 125 1 O ARG B 123 N ALA B 102 SHEET 4 AA6 4 GLU B 160 ASP B 162 -1 O PHE B 161 N PHE B 124 SHEET 1 AA7 6 VAL C 1 ARG C 5 0 SHEET 2 AA7 6 LEU C 9 LEU C 14 -1 O ARG C 11 N VAL C 4 SHEET 3 AA7 6 VAL C 46 SER C 50 1 O VAL C 48 N ALA C 12 SHEET 4 AA7 6 ALA C 93 VAL C 98 1 O VAL C 95 N LEU C 49 SHEET 5 AA7 6 LEU C 115 ALA C 118 1 O LEU C 117 N ALA C 96 SHEET 6 AA7 6 LEU C 174 ALA C 175 1 O LEU C 174 N ALA C 118 SHEET 1 AA8 4 ASP C 55 CYS C 57 0 SHEET 2 AA8 4 ARG C 101 THR C 103 1 O THR C 103 N CYS C 57 SHEET 3 AA8 4 ARG C 123 ARG C 125 1 O ARG C 123 N ALA C 102 SHEET 4 AA8 4 GLU C 160 ASP C 162 -1 O PHE C 161 N PHE C 124 LINK C ALA A 136 N MSE A 137 1555 1555 1.33 LINK C MSE A 137 N ALA A 138 1555 1555 1.33 LINK C ALA B 136 N MSE B 137 1555 1555 1.33 LINK C MSE B 137 N ALA B 138 1555 1555 1.34 LINK C ALA C 136 N MSE C 137 1555 1555 1.34 LINK C MSE C 137 N ALA C 138 1555 1555 1.33 CRYST1 84.310 84.310 230.190 90.00 90.00 90.00 P 41 21 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011861 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011861 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004344 0.00000