HEADER VIRAL PROTEIN 26-JUL-22 8AIC TITLE X-RAY STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF ENV GLYCOPROTEIN OF TITLE 2 SIMIAN FOAMY VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN GP130; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ENV POLYPROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SIMIAN FOAMY VIRUS; SOURCE 3 ORGANISM_TAXID: 11642; SOURCE 4 VARIANT: BAK74; SOURCE 5 GENE: ENV; SOURCE 6 EXPRESSION_SYSTEM: DROSOPHILA MELANOGASTER; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7227; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SCNEIDER; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: 2 KEYWDS RECEPTOR BINDING DOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.BACKOVIC,I.FERNANDEZ REVDAT 3 01-MAY-24 8AIC 1 REMARK REVDAT 2 15-MAR-23 8AIC 1 JRNL REVDAT 1 22-FEB-23 8AIC 0 JRNL AUTH I.FERNANDEZ,L.T.DYNESEN,Y.COQUIN,R.PEDERZOLI,D.BRUN,A.HAOUZ, JRNL AUTH 2 A.GESSAIN,F.A.REY,F.BUSEYNE,M.BACKOVIC JRNL TITL THE CRYSTAL STRUCTURE OF A SIMIAN FOAMY VIRUS RECEPTOR JRNL TITL 2 BINDING DOMAIN PROVIDES CLUES ABOUT ENTRY INTO HOST CELLS. JRNL REF NAT COMMUN V. 14 1262 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 36878926 JRNL DOI 10.1038/S41467-023-36923-0 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 40615 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2113 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7300 - 6.9000 1.00 2561 182 0.1843 0.2016 REMARK 3 2 6.8900 - 5.4800 1.00 2601 153 0.1911 0.2104 REMARK 3 3 5.4800 - 4.7800 1.00 2559 158 0.1521 0.2028 REMARK 3 4 4.7800 - 4.3500 1.00 2583 129 0.1471 0.1648 REMARK 3 5 4.3500 - 4.0400 1.00 2582 135 0.1464 0.2026 REMARK 3 6 4.0400 - 3.8000 1.00 2588 150 0.1592 0.2073 REMARK 3 7 3.8000 - 3.6100 1.00 2544 148 0.1704 0.2095 REMARK 3 8 3.6100 - 3.4500 1.00 2558 135 0.2466 0.2804 REMARK 3 9 3.4500 - 3.3200 1.00 2604 138 0.2473 0.2836 REMARK 3 10 3.3200 - 3.2000 1.00 2541 132 0.2294 0.2708 REMARK 3 11 3.2000 - 3.1000 1.00 2607 94 0.2349 0.3053 REMARK 3 12 3.1000 - 3.0100 0.99 2527 142 0.2441 0.3016 REMARK 3 13 3.0100 - 2.9400 0.99 2580 135 0.2880 0.3522 REMARK 3 14 2.9400 - 2.8600 0.99 2564 144 0.3571 0.4387 REMARK 3 15 2.8600 - 2.8000 0.98 2548 138 0.4257 0.4368 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.439 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.935 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.66 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 6139 REMARK 3 ANGLE : 0.761 8345 REMARK 3 CHIRALITY : 0.049 996 REMARK 3 PLANARITY : 0.006 1007 REMARK 3 DIHEDRAL : 9.989 1076 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 37.3340 43.2540 29.6017 REMARK 3 T TENSOR REMARK 3 T11: 0.3067 T22: 0.3586 REMARK 3 T33: 0.4182 T12: -0.0009 REMARK 3 T13: 0.0370 T23: 0.0618 REMARK 3 L TENSOR REMARK 3 L11: 1.1363 L22: 0.4629 REMARK 3 L33: 1.6808 L12: -0.3488 REMARK 3 L13: 0.8150 L23: -0.4002 REMARK 3 S TENSOR REMARK 3 S11: 0.0025 S12: -0.2695 S13: -0.1592 REMARK 3 S21: 0.0464 S22: 0.1193 S23: 0.1504 REMARK 3 S31: -0.0648 S32: -0.2353 S33: -0.1200 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 26-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292124316. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40619 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 46.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 21.60 REMARK 200 R MERGE (I) : 0.19900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.3500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 21.60 REMARK 200 R MERGE FOR SHELL (I) : 1.70500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, PHENIX REMARK 200 STARTING MODEL: RELATED DEPOSITION D_1292124233 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M AMMONIUM TARTARATE, 20% W/V PEG REMARK 280 3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.87033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 127.74067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 95.80550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 159.67583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 31.93517 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, H, I, J, K, L REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE A 420 REMARK 465 PRO A 421 REMARK 465 HIS A 422 REMARK 465 ARG A 423 REMARK 465 ARG A 424 REMARK 465 PHE A 425 REMARK 465 ASN A 426 REMARK 465 ASP A 555 REMARK 465 ASP A 556 REMARK 465 LYS A 557 REMARK 465 HIS B 422 REMARK 465 ARG B 423 REMARK 465 ARG B 424 REMARK 465 PHE B 425 REMARK 465 ASN B 426 REMARK 465 ASP B 553 REMARK 465 ASP B 554 REMARK 465 ASP B 555 REMARK 465 ASP B 556 REMARK 465 LYS B 557 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 218 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 412 CG CD OE1 OE2 REMARK 470 LYS A 528 CG CD CE NZ REMARK 470 ARG B 218 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 325 CG CD CE NZ REMARK 470 LYS B 418 CG CD CE NZ REMARK 470 ASP B 419 CG OD1 OD2 REMARK 470 PHE B 420 CG CD1 CD2 CE1 CE2 CZ REMARK 470 PRO B 421 CG CD REMARK 470 TYR B 525 CG CD1 CD2 CE1 CE2 CZ OH REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ASP A 219 REMARK 475 VAL A 264 REMARK 475 ASP B 219 REMARK 475 VAL B 264 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE B 303 NH1 ARG B 308 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 421 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 219 74.10 -69.78 REMARK 500 ASN A 286 54.56 -117.09 REMARK 500 SER A 300 -142.27 -101.67 REMARK 500 ASP A 450 99.55 -61.91 REMARK 500 LEU A 466 69.09 -115.63 REMARK 500 GLN A 492 173.39 69.26 REMARK 500 SER B 300 -141.92 -100.98 REMARK 500 TRP B 435 -61.41 -99.35 REMARK 500 HIS B 451 -14.74 67.22 REMARK 500 LEU B 466 62.44 -116.82 REMARK 500 MET B 475 7.43 -68.83 REMARK 500 GLN B 492 -154.60 70.29 REMARK 500 TYR B 525 6.06 -68.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8AEZ RELATED DB: PDB REMARK 900 THE SAME PROTEIN, ENZYMATICALLY DEGLYCOSYLATED DBREF 8AIC A 218 552 UNP K7YEW5 K7YEW5_9RETR 218 552 DBREF 8AIC B 218 552 UNP K7YEW5 K7YEW5_9RETR 218 552 SEQADV 8AIC ASP A 553 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP A 554 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP A 555 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP A 556 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC LYS A 557 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP B 553 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP B 554 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP B 555 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC ASP B 556 UNP K7YEW5 EXPRESSION TAG SEQADV 8AIC LYS B 557 UNP K7YEW5 EXPRESSION TAG SEQRES 1 A 340 ARG ASP GLN GLU GLN TYR ILE HIS ARG LYS CYS TYR GLN SEQRES 2 A 340 GLU PHE ALA HIS CYS TYR LEU VAL LYS TYR LYS THR PRO SEQRES 3 A 340 GLN PRO TRP PRO ASN GLU GLY LEU ILE ALA ASP GLN CYS SEQRES 4 A 340 PRO LEU PRO GLY LEU ALA ASP VAL SER PHE TYR PRO TYR SEQRES 5 A 340 GLN ALA ILE TRP ASP TYR TYR ALA LYS ILE GLU ASN ILE SEQRES 6 A 340 ARG PRO ALA ASN TRP THR SER SER LYS LEU TYR GLY LYS SEQRES 7 A 340 ALA ARG MET GLY SER TYR TYR ILE PRO LYS ARG LEU ARG SEQRES 8 A 340 ASN ILE ASN ASN THR HIS ILE LEU PHE CYS SER ASP VAL SEQRES 9 A 340 LEU TYR SER LYS TRP TYR ASN LEU GLN ASN SER ILE LEU SEQRES 10 A 340 GLN ASN GLU ASN GLU LEU THR LYS ARG LEU SER ASN LEU SEQRES 11 A 340 THR ILE GLY ASN LYS LEU LYS ASN ARG ALA LEU PRO TYR SEQRES 12 A 340 GLU TRP ALA LYS GLY GLY LEU ASN ARG LEU PHE ARG ASN SEQRES 13 A 340 ILE SER VAL LEU ASP VAL CYS SER ARG PRO GLU MET VAL SEQRES 14 A 340 LEU LEU LEU ASN LYS THR TYR TYR THR PHE SER LEU TRP SEQRES 15 A 340 GLU GLY ASP CYS ASN ILE THR ARG TYR ASN VAL ASN GLU SEQRES 16 A 340 THR VAL PRO GLU CYS LYS ASP PHE PRO HIS ARG ARG PHE SEQRES 17 A 340 ASN ASP HIS PRO TYR SER CYS ARG LEU TRP ARG TYR ARG SEQRES 18 A 340 GLU GLY LYS GLU GLU VAL LYS CYS LEU THR SER ASP HIS SEQRES 19 A 340 THR ARG CYS LEU TYR TYR PRO GLU TYR SER ASN PRO GLU SEQRES 20 A 340 ALA LEU PHE ASP PHE GLY PHE LEU SER TYR MET ARG ASN SEQRES 21 A 340 PHE PRO GLY PRO GLN CYS ILE GLU SER THR SER ILE ARG SEQRES 22 A 340 GLN GLN ASP TYR GLU VAL TYR SER ILE TYR GLN GLU CYS SEQRES 23 A 340 LYS LEU ALA SER LYS THR TYR GLY ILE ASP SER VAL LEU SEQRES 24 A 340 PHE SER LEU LYS ASN PHE LEU ASN TYR THR GLY LYS PRO SEQRES 25 A 340 VAL ASN GLU MET PRO ASN ALA ARG ALA PHE VAL GLY LEU SEQRES 26 A 340 ILE ASP PRO LYS PHE PRO PRO THR TYR PRO ASP ASP ASP SEQRES 27 A 340 ASP LYS SEQRES 1 B 340 ARG ASP GLN GLU GLN TYR ILE HIS ARG LYS CYS TYR GLN SEQRES 2 B 340 GLU PHE ALA HIS CYS TYR LEU VAL LYS TYR LYS THR PRO SEQRES 3 B 340 GLN PRO TRP PRO ASN GLU GLY LEU ILE ALA ASP GLN CYS SEQRES 4 B 340 PRO LEU PRO GLY LEU ALA ASP VAL SER PHE TYR PRO TYR SEQRES 5 B 340 GLN ALA ILE TRP ASP TYR TYR ALA LYS ILE GLU ASN ILE SEQRES 6 B 340 ARG PRO ALA ASN TRP THR SER SER LYS LEU TYR GLY LYS SEQRES 7 B 340 ALA ARG MET GLY SER TYR TYR ILE PRO LYS ARG LEU ARG SEQRES 8 B 340 ASN ILE ASN ASN THR HIS ILE LEU PHE CYS SER ASP VAL SEQRES 9 B 340 LEU TYR SER LYS TRP TYR ASN LEU GLN ASN SER ILE LEU SEQRES 10 B 340 GLN ASN GLU ASN GLU LEU THR LYS ARG LEU SER ASN LEU SEQRES 11 B 340 THR ILE GLY ASN LYS LEU LYS ASN ARG ALA LEU PRO TYR SEQRES 12 B 340 GLU TRP ALA LYS GLY GLY LEU ASN ARG LEU PHE ARG ASN SEQRES 13 B 340 ILE SER VAL LEU ASP VAL CYS SER ARG PRO GLU MET VAL SEQRES 14 B 340 LEU LEU LEU ASN LYS THR TYR TYR THR PHE SER LEU TRP SEQRES 15 B 340 GLU GLY ASP CYS ASN ILE THR ARG TYR ASN VAL ASN GLU SEQRES 16 B 340 THR VAL PRO GLU CYS LYS ASP PHE PRO HIS ARG ARG PHE SEQRES 17 B 340 ASN ASP HIS PRO TYR SER CYS ARG LEU TRP ARG TYR ARG SEQRES 18 B 340 GLU GLY LYS GLU GLU VAL LYS CYS LEU THR SER ASP HIS SEQRES 19 B 340 THR ARG CYS LEU TYR TYR PRO GLU TYR SER ASN PRO GLU SEQRES 20 B 340 ALA LEU PHE ASP PHE GLY PHE LEU SER TYR MET ARG ASN SEQRES 21 B 340 PHE PRO GLY PRO GLN CYS ILE GLU SER THR SER ILE ARG SEQRES 22 B 340 GLN GLN ASP TYR GLU VAL TYR SER ILE TYR GLN GLU CYS SEQRES 23 B 340 LYS LEU ALA SER LYS THR TYR GLY ILE ASP SER VAL LEU SEQRES 24 B 340 PHE SER LEU LYS ASN PHE LEU ASN TYR THR GLY LYS PRO SEQRES 25 B 340 VAL ASN GLU MET PRO ASN ALA ARG ALA PHE VAL GLY LEU SEQRES 26 B 340 ILE ASP PRO LYS PHE PRO PRO THR TYR PRO ASP ASP ASP SEQRES 27 B 340 ASP LYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET NAG D 1 14 HET NAG D 2 14 HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET NAG F 1 14 HET NAG F 2 14 HET BMA F 3 11 HET MAN F 4 11 HET MAN F 5 11 HET MAN F 6 11 HET MAN F 7 11 HET MAN F 8 11 HET MAN F 9 11 HET MAN F 10 11 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET NAG H 1 14 HET NAG H 2 14 HET NAG I 1 14 HET NAG I 2 14 HET NAG J 1 14 HET NAG J 2 14 HET NAG K 1 14 HET NAG K 2 14 HET BMA K 3 11 HET MAN K 4 11 HET MAN K 5 11 HET MAN K 6 11 HET MAN K 7 11 HET MAN K 8 11 HET MAN K 9 11 HET NAG L 1 14 HET NAG L 2 14 HET BMA L 3 11 HET NAG A 601 14 HET NAG B 601 14 HET NAG B 602 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 23(C8 H15 N O6) FORMUL 3 BMA 6(C6 H12 O6) FORMUL 6 MAN 13(C6 H12 O6) FORMUL 16 HOH *107(H2 O) HELIX 1 AA1 GLN A 220 ALA A 233 1 14 HELIX 2 AA2 GLY A 260 VAL A 264 5 5 HELIX 3 AA3 GLN A 270 TYR A 276 5 7 HELIX 4 AA4 SER A 289 GLY A 294 1 6 HELIX 5 AA5 PRO A 304 ARG A 308 5 5 HELIX 6 AA6 SER A 332 LEU A 347 1 16 HELIX 7 AA7 ASN A 355 LEU A 358 5 4 HELIX 8 AA8 LEU A 377 ARG A 382 1 6 HELIX 9 AA9 ARG A 382 ASN A 390 1 9 HELIX 10 AB1 GLY A 401 ILE A 405 5 5 HELIX 11 AB2 ASN A 409 VAL A 414 1 6 HELIX 12 AB3 ASP A 468 MET A 475 1 8 HELIX 13 AB4 ILE A 499 GLY A 511 1 13 HELIX 14 AB5 GLY A 511 ASN A 524 1 14 HELIX 15 AB6 PRO A 529 MET A 533 5 5 HELIX 16 AB7 GLN B 220 ALA B 233 1 14 HELIX 17 AB8 GLY B 260 VAL B 264 5 5 HELIX 18 AB9 GLN B 270 TYR B 276 5 7 HELIX 19 AC1 SER B 289 GLY B 294 1 6 HELIX 20 AC2 PRO B 304 ARG B 308 5 5 HELIX 21 AC3 SER B 332 LEU B 347 1 16 HELIX 22 AC4 ASN B 355 LEU B 358 5 4 HELIX 23 AC5 LEU B 377 ARG B 382 1 6 HELIX 24 AC6 ARG B 382 ASN B 390 1 9 HELIX 25 AC7 GLY B 401 ILE B 405 5 5 HELIX 26 AC8 ASN B 409 VAL B 414 1 6 HELIX 27 AC9 PRO B 415 LYS B 418 5 4 HELIX 28 AD1 ASP B 468 MET B 475 1 8 HELIX 29 AD2 ILE B 499 GLY B 511 1 13 HELIX 30 AD3 GLY B 511 LEU B 523 1 13 HELIX 31 AD4 PRO B 529 MET B 533 5 5 SHEET 1 AA1 4 GLU A 495 SER A 498 0 SHEET 2 AA1 4 CYS A 235 LYS A 239 -1 N LYS A 239 O GLU A 495 SHEET 3 AA1 4 HIS A 314 CYS A 318 -1 O ILE A 315 N VAL A 238 SHEET 4 AA1 4 PHE A 539 LEU A 542 -1 O LEU A 542 N HIS A 314 SHEET 1 AA2 2 GLY A 250 LEU A 251 0 SHEET 2 AA2 2 TYR A 301 TYR A 302 -1 O TYR A 301 N LEU A 251 SHEET 1 AA3 3 ILE A 282 ARG A 283 0 SHEET 2 AA3 3 CYS A 454 TYR A 457 -1 O CYS A 454 N ARG A 283 SHEET 3 AA3 3 GLU A 443 LYS A 445 -1 N LYS A 445 O LEU A 455 SHEET 1 AA4 2 THR A 348 ILE A 349 0 SHEET 2 AA4 2 LYS A 352 LEU A 353 -1 O LYS A 352 N ILE A 349 SHEET 1 AA5 2 THR A 392 TYR A 394 0 SHEET 2 AA5 2 SER A 486 SER A 488 -1 O THR A 487 N TYR A 393 SHEET 1 AA6 4 GLU B 495 SER B 498 0 SHEET 2 AA6 4 CYS B 235 LYS B 239 -1 N LYS B 239 O GLU B 495 SHEET 3 AA6 4 HIS B 314 CYS B 318 -1 O ILE B 315 N VAL B 238 SHEET 4 AA6 4 PHE B 539 LEU B 542 -1 O VAL B 540 N LEU B 316 SHEET 1 AA7 2 GLY B 250 LEU B 251 0 SHEET 2 AA7 2 TYR B 301 TYR B 302 -1 O TYR B 301 N LEU B 251 SHEET 1 AA8 3 ILE B 282 ARG B 283 0 SHEET 2 AA8 3 CYS B 454 TYR B 457 -1 O CYS B 454 N ARG B 283 SHEET 3 AA8 3 GLU B 443 LYS B 445 -1 N LYS B 445 O LEU B 455 SHEET 1 AA9 2 THR B 348 ILE B 349 0 SHEET 2 AA9 2 LYS B 352 LEU B 353 -1 O LYS B 352 N ILE B 349 SHEET 1 AB1 2 THR B 392 TYR B 394 0 SHEET 2 AB1 2 SER B 486 SER B 488 -1 O THR B 487 N TYR B 393 SSBOND 1 CYS A 228 CYS A 503 1555 1555 2.03 SSBOND 2 CYS A 235 CYS A 318 1555 1555 2.04 SSBOND 3 CYS A 256 CYS A 380 1555 1555 2.03 SSBOND 4 CYS A 403 CYS A 483 1555 1555 2.04 SSBOND 5 CYS A 417 CYS A 432 1555 1555 2.04 SSBOND 6 CYS A 446 CYS A 454 1555 1555 2.03 SSBOND 7 CYS B 228 CYS B 503 1555 1555 2.03 SSBOND 8 CYS B 235 CYS B 318 1555 1555 2.04 SSBOND 9 CYS B 256 CYS B 380 1555 1555 2.03 SSBOND 10 CYS B 403 CYS B 483 1555 1555 2.04 SSBOND 11 CYS B 417 CYS B 432 1555 1555 2.03 SSBOND 12 CYS B 446 CYS B 454 1555 1555 2.03 LINK ND2 ASN A 311 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN A 346 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 373 C1 NAG C 1 1555 1555 1.45 LINK ND2 ASN A 390 C1 NAG F 1 1555 1555 1.44 LINK ND2 ASN A 404 C1 NAG A 601 1555 1555 1.45 LINK ND2 ASN A 524 C1 NAG E 1 1555 1555 1.44 LINK ND2 ASN B 311 C1 NAG L 1 1555 1555 1.45 LINK ND2 ASN B 346 C1 NAG B 601 1555 1555 1.45 LINK ND2 ASN B 373 C1 NAG H 1 1555 1555 1.45 LINK ND2 ASN B 390 C1 NAG K 1 1555 1555 1.44 LINK ND2 ASN B 404 C1 NAG I 1 1555 1555 1.46 LINK ND2 ASN B 411 C1 NAG B 602 1555 1555 1.44 LINK ND2 ASN B 524 C1 NAG J 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.44 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.44 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG F 2 C1 BMA F 3 1555 1555 1.44 LINK O3 BMA F 3 C1 MAN F 4 1555 1555 1.44 LINK O6 BMA F 3 C1 MAN F 7 1555 1555 1.45 LINK O2 MAN F 4 C1 MAN F 5 1555 1555 1.44 LINK O2 MAN F 5 C1 MAN F 6 1555 1555 1.45 LINK O6 MAN F 7 C1 MAN F 8 1555 1555 1.44 LINK O3 MAN F 7 C1 MAN F 10 1555 1555 1.44 LINK O2 MAN F 8 C1 MAN F 9 1555 1555 1.47 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.45 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.45 LINK O4 NAG I 1 C1 NAG I 2 1555 1555 1.45 LINK O4 NAG J 1 C1 NAG J 2 1555 1555 1.44 LINK O4 NAG K 1 C1 NAG K 2 1555 1555 1.44 LINK O4 NAG K 2 C1 BMA K 3 1555 1555 1.44 LINK O3 BMA K 3 C1 MAN K 4 1555 1555 1.45 LINK O6 BMA K 3 C1 MAN K 7 1555 1555 1.45 LINK O2 MAN K 4 C1 MAN K 5 1555 1555 1.44 LINK O2 MAN K 5 C1 MAN K 6 1555 1555 1.45 LINK O3 MAN K 7 C1 MAN K 8 1555 1555 1.44 LINK O6 MAN K 7 C1 MAN K 9 1555 1555 1.45 LINK O4 NAG L 1 C1 NAG L 2 1555 1555 1.45 LINK O4 NAG L 2 C1 BMA L 3 1555 1555 1.46 CISPEP 1 PHE A 547 PRO A 548 0 -3.15 CISPEP 2 PHE B 547 PRO B 548 0 -3.72 CRYST1 123.624 123.624 191.611 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008089 0.004670 0.000000 0.00000 SCALE2 0.000000 0.009340 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005219 0.00000