HEADER OXIDOREDUCTASE 27-JUL-22 8AIP TITLE CRYSTAL STRUCTURE OF TWO-DOMAIN BACTERIAL LACCASE FROM THE TITLE 2 ACTINOBACTERIUM STREPTOMYCES CARPINENSIS VKM AC-1300 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TWO-DOMAIN LACCASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES CARPINENSIS; SOURCE 3 ORGANISM_TAXID: 66369; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TWO-DOMAIN LACCASE, LACCASE, STREPTOMYCES CARPINENSIS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.G.GABDULKHAKOV,T.V.TISHCHENKO,L.TRUBITSINA,I.TRUBITSIN, AUTHOR 2 A.LEONTIEVSKY,A.LISOV REVDAT 2 28-FEB-24 8AIP 1 JRNL REVDAT 1 16-AUG-23 8AIP 0 JRNL AUTH L.I.TRUBITSINA,I.V.TRUBITSIN,A.V.LISOV,A.G.GABDULKHAKOV, JRNL AUTH 2 A.G.ZAVARZINA,O.V.BELOVA,A.P.LARIONOVA,S.V.TISHCHENKO, JRNL AUTH 3 A.A.LEONTIEVSKY JRNL TITL A NOVEL TWO-DOMAIN LACCASE WITH MIDDLE REDOX POTENTIAL: JRNL TITL 2 PHYSICOCHEMICAL AND STRUCTURAL PROPERTIES. JRNL REF BIOCHEMISTRY MOSC. V. 88 1658 2023 JRNL REFN ISSN 0006-2979 JRNL PMID 38105031 JRNL DOI 10.1134/S0006297923100188 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 13065 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.231 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.910 REMARK 3 FREE R VALUE TEST SET COUNT : 642 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2341 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.2755 REMARK 3 BIN FREE R VALUE SET COUNT : 122 REMARK 3 BIN FREE R VALUE : 0.3648 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2122 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 83 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.331 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; NULL ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): 38.8202 -15.2702 20.3105 REMARK 3 T TENSOR REMARK 3 T11: 0.1345 T22: 0.1445 REMARK 3 T33: 0.1420 T12: -0.0102 REMARK 3 T13: 0.0232 T23: -0.0294 REMARK 3 L TENSOR REMARK 3 L11: 0.1997 L22: 0.1728 REMARK 3 L33: 0.3200 L12: 0.0705 REMARK 3 L13: -0.1520 L23: -0.0867 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: -0.0034 S13: 0.0231 REMARK 3 S21: -0.0035 S22: -0.0082 S23: -0.0592 REMARK 3 S31: -0.0384 S32: 0.0000 S33: 0.0000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.11 REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AIP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-JUL-22. REMARK 100 THE DEPOSITION ID IS D_1292124422. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-20 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER X8 PROTEUM REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PROTEUM PLUS REMARK 200 DATA SCALING SOFTWARE : PROTEUM PLUS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13826 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 33.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 4.290 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.35500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4GYB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20%V/V PEG SMEAR BROAD, 0.1 M SODIUM REMARK 280 CITRATATE, PH 5.6, 0.15 M MG ACETATE (CONDITION #33 OF BCS-1 REMARK 280 FROM MOLECULAR DIMENSIONS, UK), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -122.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 583 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 35 REMARK 465 SER A 36 REMARK 465 ASP A 37 REMARK 465 LYS A 38 REMARK 465 GLY A 314 REMARK 465 MET A 315 REMARK 465 HIS A 316 REMARK 465 ASP A 317 REMARK 465 MET A 318 REMARK 465 HIS A 319 REMARK 465 ASP A 320 REMARK 465 MET A 321 REMARK 465 HIS A 322 REMARK 465 ASN A 323 REMARK 465 MET A 324 REMARK 465 PRO A 325 REMARK 465 GLY A 326 REMARK 465 MET A 327 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 60 39.50 70.37 REMARK 500 ASN A 159 -12.22 -145.60 REMARK 500 ASP A 197 -131.93 57.78 REMARK 500 MET A 198 41.42 -93.50 REMARK 500 THR A 204 -142.19 -130.04 REMARK 500 ALA A 205 -149.34 62.26 REMARK 500 ARG A 278 -2.60 66.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 402 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 156 NE2 REMARK 620 2 HIS A 289 NE2 91.9 REMARK 620 3 OXY A 404 O1 87.9 5.9 REMARK 620 4 OXY A 404 O2 87.4 4.9 2.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 403 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 158 NE2 REMARK 620 2 HIS A 236 NE2 106.3 REMARK 620 3 HIS A 287 NE2 106.1 3.4 REMARK 620 4 OXY A 404 O1 111.0 5.5 4.9 REMARK 620 5 OXY A 404 O2 110.6 6.5 4.7 2.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 401 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 231 ND1 REMARK 620 2 CYS A 288 SG 131.7 REMARK 620 3 HIS A 293 ND1 101.0 123.7 REMARK 620 N 1 2 DBREF 8AIP A 35 327 PDB 8AIP 8AIP 35 327 SEQRES 1 A 293 THR SER ASP LYS PRO ALA ALA ALA ASP LYS GLY GLY ASP SEQRES 2 A 293 VAL ARG ASN LEU THR LEU TYR MET GLU LYS LEU PRO ASN SEQRES 3 A 293 GLY GLU MET GLY TYR GLY LEU ARG PRO GLY GLU ALA THR SEQRES 4 A 293 ILE PRO GLY PRO LEU ILE GLU LEU THR GLU GLY ASP THR SEQRES 5 A 293 MET ASN ILE GLU VAL VAL ASN ASN LEU ASP VAL ALA ALA SEQRES 6 A 293 SER LEU HIS VAL HIS GLY LEU ASP TYR ASP VAL ALA SER SEQRES 7 A 293 ASP GLY THR LYS MET ASN ASP SER VAL VAL GLN PRO GLY SEQRES 8 A 293 GLU ARG ARG THR TYR VAL TRP ARG THR HIS ALA PRO GLY SEQRES 9 A 293 LYS ARG HIS ASP GLY THR TRP GLU ALA GLY SER ALA GLY SEQRES 10 A 293 TYR TRP HIS TYR HIS ASP HIS ASN VAL GLY THR GLU HIS SEQRES 11 A 293 GLY THR GLY GLY ILE LYS LYS GLY LEU TYR GLY PRO VAL SEQRES 12 A 293 VAL VAL ARG ARG LYS GLY ASP VAL LEU PRO ASP LYS GLN SEQRES 13 A 293 PHE THR VAL VAL PHE ASN ASP MET THR ILE ASN ASN ARG SEQRES 14 A 293 THR ALA PRO ASN THR PRO MET PHE LYS ALA VAL ARG GLY SEQRES 15 A 293 GLU ARG VAL GLU PHE ILE VAL ILE THR HIS GLY ASP PHE SEQRES 16 A 293 PHE HIS THR PHE HIS VAL HIS GLY HIS ARG TRP VAL ASP SEQRES 17 A 293 ASN ARG THR GLY ILE LEU GLU GLY PRO GLN ASP VAL SER SEQRES 18 A 293 ARG VAL ILE ASP THR LYS THR THR GLY PRO ALA ASP SER SEQRES 19 A 293 PHE GLY PHE GLN VAL ILE ALA GLY GLU ARG VAL GLY ALA SEQRES 20 A 293 GLY HIS TRP MET TYR HIS CYS HIS VAL GLN SER HIS SER SEQRES 21 A 293 ASP MET GLY MET SER GLY VAL PHE MET VAL THR GLU ALA SEQRES 22 A 293 ASP GLY SER VAL PRO GLY GLY MET HIS ASP MET HIS ASP SEQRES 23 A 293 MET HIS ASN MET PRO GLY MET HET CU A 401 1 HET CU A 402 1 HET CU A 403 1 HET OXY A 404 2 HETNAM CU COPPER (II) ION HETNAM OXY OXYGEN MOLECULE FORMUL 2 CU 3(CU 2+) FORMUL 5 OXY O2 FORMUL 6 HOH *83(H2 O) HELIX 1 AA1 PRO A 59 GLY A 61 5 3 HELIX 2 AA2 ASP A 109 ASP A 113 5 5 HELIX 3 AA3 THR A 115 ASP A 119 5 5 HELIX 4 AA4 GLY A 165 GLY A 172 1 8 HELIX 5 AA5 VAL A 290 MET A 296 1 7 SHEET 1 AA1 5 ALA A 72 THR A 73 0 SHEET 2 AA1 5 GLU A 62 GLY A 66 -1 N TYR A 65 O THR A 73 SHEET 3 AA1 5 VAL A 48 LEU A 58 -1 N TYR A 54 O GLY A 66 SHEET 4 AA1 5 THR A 86 ASN A 93 1 O ASN A 88 N LEU A 51 SHEET 5 AA1 5 ARG A 127 ARG A 133 -1 O ARG A 128 N VAL A 91 SHEET 1 AA2 4 ILE A 79 THR A 82 0 SHEET 2 AA2 4 TYR A 174 ARG A 180 1 O ARG A 180 N LEU A 81 SHEET 3 AA2 4 GLY A 151 HIS A 156 -1 N TRP A 153 O VAL A 177 SHEET 4 AA2 4 HIS A 102 VAL A 103 -1 N HIS A 102 O HIS A 156 SHEET 1 AA3 2 GLY A 138 LYS A 139 0 SHEET 2 AA3 2 TRP A 145 GLU A 146 -1 O GLU A 146 N GLY A 138 SHEET 1 AA4 4 THR A 199 ILE A 200 0 SHEET 2 AA4 4 LYS A 189 ASN A 196 -1 N ASN A 196 O THR A 199 SHEET 3 AA4 4 ARG A 218 HIS A 226 1 O HIS A 226 N PHE A 195 SHEET 4 AA4 4 SER A 268 ILE A 274 -1 O VAL A 273 N VAL A 219 SHEET 1 AA5 5 PHE A 211 VAL A 214 0 SHEET 2 AA5 5 SER A 299 THR A 305 1 O THR A 305 N ALA A 213 SHEET 3 AA5 5 GLY A 282 CYS A 288 -1 N TRP A 284 O PHE A 302 SHEET 4 AA5 5 HIS A 231 VAL A 235 -1 N HIS A 234 O HIS A 287 SHEET 5 AA5 5 THR A 260 THR A 263 -1 O THR A 263 N HIS A 231 SHEET 1 AA6 2 TRP A 240 VAL A 241 0 SHEET 2 AA6 2 VAL A 257 ILE A 258 -1 O ILE A 258 N TRP A 240 LINK NE2 HIS A 156 CU CU A 402 1555 6555 2.08 LINK NE2 HIS A 158 CU CU A 403 1555 6555 2.26 LINK ND1 HIS A 231 CU CU A 401 1555 1555 2.19 LINK NE2 HIS A 236 CU CU A 403 1555 1555 2.13 LINK NE2 HIS A 287 CU CU A 403 1555 1555 2.24 LINK SG CYS A 288 CU CU A 401 1555 1555 2.14 LINK NE2 HIS A 289 CU CU A 402 1555 1555 2.16 LINK ND1 HIS A 293 CU CU A 401 1555 1555 2.10 LINK CU CU A 402 O1 OXY A 404 1555 1555 2.66 LINK CU CU A 402 O2 OXY A 404 1555 1555 2.63 LINK CU CU A 403 O1 OXY A 404 1555 1555 2.52 LINK CU CU A 403 O2 OXY A 404 1555 1555 2.36 CISPEP 1 ILE A 74 PRO A 75 0 -1.45 CRYST1 97.962 97.962 97.962 90.00 90.00 90.00 P 2 3 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010208 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010208 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010208 0.00000