HEADER SIGNALING PROTEIN 08-AUG-22 8AOQ TITLE CEREBLON ISOFORM 4 FROM MAGNETOSPIRILLUM GRYPHISWALDENSE IN COMPLEX TITLE 2 WITH COMPOUND 20A COMPND MOL_ID: 1; COMPND 2 MOLECULE: CEREBLON ISOFORM 4; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MAGNETOSPIRILLUM GRYPHISWALDENSE; SOURCE 3 ORGANISM_TAXID: 55518; SOURCE 4 GENE: MGR_0879; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PROTEOLYSIS TARGETING CHIMERA, PROTAC, PROTEIN DEGRADATION, SIGNALING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.MAIWALD,C.HEIM,M.D.HARTMANN REVDAT 2 07-FEB-24 8AOQ 1 REMARK REVDAT 1 11-JAN-23 8AOQ 0 JRNL AUTH M.KRASAVIN,M.ADAMCHIK,A.BUBYREV,C.HEIM,S.MAIWALD, JRNL AUTH 2 D.ZHUKOVSKY,P.ZHMUROV,A.BUNEV,M.D.HARTMANN JRNL TITL SYNTHESIS OF NOVEL GLUTARIMIDE LIGANDS FOR THE E3 LIGASE JRNL TITL 2 SUBSTRATE RECEPTOR CEREBLON (CRBN): INVESTIGATION OF THEIR JRNL TITL 3 BINDING MODE AND ANTIPROLIFERATIVE EFFECTS AGAINST MYELOMA JRNL TITL 4 CELL LINES. JRNL REF EUR.J.MED.CHEM. V. 246 14990 2023 JRNL REFN ISSN 0223-5234 JRNL PMID 36476642 JRNL DOI 10.1016/J.EJMECH.2022.114990 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0266 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.16 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18215 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.968 REMARK 3 FREE R VALUE TEST SET COUNT : 905 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.14 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1247 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 60 REMARK 3 BIN FREE R VALUE : 0.2530 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1885 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 45 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.76700 REMARK 3 B22 (A**2) : 0.49200 REMARK 3 B33 (A**2) : -1.25900 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.190 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.107 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.959 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2004 ; 0.007 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1745 ; 0.001 ; 0.018 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2712 ; 1.463 ; 1.636 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3983 ; 1.263 ; 1.577 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 248 ; 7.181 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 97 ;35.906 ;20.825 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 262 ;12.829 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;10.232 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 241 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2335 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 533 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 334 ; 0.172 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 74 ; 0.211 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 910 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 61 ; 0.135 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1007 ; 1.538 ; 3.681 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1006 ; 1.539 ; 3.680 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1250 ; 2.388 ; 5.505 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1251 ; 2.387 ; 5.506 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 997 ; 1.950 ; 3.851 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 998 ; 1.949 ; 3.852 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1462 ; 3.116 ; 5.697 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1463 ; 3.115 ; 5.698 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 19 A 123 NULL REMARK 3 1 B 19 B 123 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 19 A 123 REMARK 3 RESIDUE RANGE : A 201 A 201 REMARK 3 RESIDUE RANGE : A 202 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): 19.1310 17.7689 2.1154 REMARK 3 T TENSOR REMARK 3 T11: 0.0148 T22: 0.0295 REMARK 3 T33: 0.0555 T12: 0.0149 REMARK 3 T13: -0.0224 T23: -0.0382 REMARK 3 L TENSOR REMARK 3 L11: 3.3063 L22: 2.5308 REMARK 3 L33: 6.2899 L12: -0.1327 REMARK 3 L13: 1.1932 L23: 1.3181 REMARK 3 S TENSOR REMARK 3 S11: 0.0932 S12: 0.1598 S13: -0.2913 REMARK 3 S21: -0.0594 S22: -0.0588 S23: 0.1501 REMARK 3 S31: 0.1707 S32: -0.0117 S33: -0.0344 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 123 REMARK 3 RESIDUE RANGE : B 201 B 201 REMARK 3 RESIDUE RANGE : B 202 B 202 REMARK 3 ORIGIN FOR THE GROUP (A): 32.0452 7.7961 23.8397 REMARK 3 T TENSOR REMARK 3 T11: 0.0299 T22: 0.0303 REMARK 3 T33: 0.0089 T12: -0.0103 REMARK 3 T13: -0.0004 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 3.5886 L22: 5.5462 REMARK 3 L33: 3.5573 L12: -2.3172 REMARK 3 L13: -0.5310 L23: -0.8116 REMARK 3 S TENSOR REMARK 3 S11: -0.0235 S12: -0.1615 S13: -0.0061 REMARK 3 S21: 0.0892 S22: 0.0039 S23: -0.1566 REMARK 3 S31: -0.0438 S32: 0.2837 S33: 0.0196 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 18 C 122 REMARK 3 ORIGIN FOR THE GROUP (A): 32.7600 -0.4899 -5.6637 REMARK 3 T TENSOR REMARK 3 T11: 0.3505 T22: 0.4798 REMARK 3 T33: 0.5588 T12: -0.0776 REMARK 3 T13: 0.0599 T23: -0.1587 REMARK 3 L TENSOR REMARK 3 L11: 6.3591 L22: 4.0015 REMARK 3 L33: 5.0731 L12: 1.4864 REMARK 3 L13: 1.0828 L23: -0.5172 REMARK 3 S TENSOR REMARK 3 S11: -0.0828 S12: 0.1858 S13: -0.5202 REMARK 3 S21: 0.0202 S22: -0.1150 S23: 0.8093 REMARK 3 S31: 0.4114 S32: -0.8058 S33: 0.1977 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL PLUS MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8AOQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292124888. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18215 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.088 REMARK 200 RESOLUTION RANGE LOW (A) : 49.200 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.96 REMARK 200 R MERGE FOR SHELL (I) : 0.85700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 4V2Y REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): NULL REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): NULL REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M AMMONIUM PHOSPHATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.33000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.16700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.58450 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.16700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.33000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.58450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 LEU A 3 REMARK 465 ASP A 4 REMARK 465 ALA A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 GLN A 8 REMARK 465 ASN A 9 REMARK 465 SER A 10 REMARK 465 THR A 11 REMARK 465 GLN A 12 REMARK 465 MET A 13 REMARK 465 VAL A 14 REMARK 465 LEU A 15 REMARK 465 ALA A 16 REMARK 465 PRO A 17 REMARK 465 GLY A 18 REMARK 465 ASP A 124 REMARK 465 MET B 1 REMARK 465 PRO B 2 REMARK 465 LEU B 3 REMARK 465 ASP B 4 REMARK 465 ALA B 5 REMARK 465 GLY B 6 REMARK 465 GLY B 7 REMARK 465 GLN B 8 REMARK 465 ASN B 9 REMARK 465 SER B 10 REMARK 465 THR B 11 REMARK 465 GLN B 12 REMARK 465 MET B 13 REMARK 465 VAL B 14 REMARK 465 LEU B 15 REMARK 465 ALA B 16 REMARK 465 PRO B 17 REMARK 465 GLY B 18 REMARK 465 ASP B 124 REMARK 465 MET C 1 REMARK 465 PRO C 2 REMARK 465 LEU C 3 REMARK 465 ASP C 4 REMARK 465 ALA C 5 REMARK 465 GLY C 6 REMARK 465 GLY C 7 REMARK 465 GLN C 8 REMARK 465 ASN C 9 REMARK 465 SER C 10 REMARK 465 THR C 11 REMARK 465 GLN C 12 REMARK 465 MET C 13 REMARK 465 VAL C 14 REMARK 465 LEU C 15 REMARK 465 ALA C 16 REMARK 465 PRO C 17 REMARK 465 ARG C 33 REMARK 465 ARG C 34 REMARK 465 ASP C 35 REMARK 465 TRP C 36 REMARK 465 LEU C 37 REMARK 465 LEU C 38 REMARK 465 PRO C 39 REMARK 465 MET C 40 REMARK 465 GLY C 41 REMARK 465 GLY C 42 REMARK 465 ASP C 43 REMARK 465 HIS C 44 REMARK 465 GLU C 45 REMARK 465 HIS C 46 REMARK 465 VAL C 47 REMARK 465 VAL C 48 REMARK 465 PHE C 49 REMARK 465 ASN C 50 REMARK 465 PRO C 51 REMARK 465 ALA C 52 REMARK 465 GLY C 53 REMARK 465 MET C 54 REMARK 465 ILE C 55 REMARK 465 PHE C 56 REMARK 465 ARG C 57 REMARK 465 VAL C 58 REMARK 465 TRP C 59 REMARK 465 CYS C 60 REMARK 465 PHE C 61 REMARK 465 SER C 62 REMARK 465 LEU C 63 REMARK 465 ALA C 64 REMARK 465 ILE C 70 REMARK 465 GLY C 71 REMARK 465 ALA C 72 REMARK 465 PRO C 73 REMARK 465 SER C 74 REMARK 465 GLY C 75 REMARK 465 GLU C 76 REMARK 465 PHE C 77 REMARK 465 SER C 78 REMARK 465 TRP C 79 REMARK 465 PHE C 80 REMARK 465 LYS C 81 REMARK 465 GLY C 82 REMARK 465 TYR C 83 REMARK 465 ASP C 84 REMARK 465 TRP C 85 REMARK 465 THR C 86 REMARK 465 TYR C 101 REMARK 465 GLU C 102 REMARK 465 GLY C 103 REMARK 465 GLY C 104 REMARK 465 SER C 105 REMARK 465 GLN C 106 REMARK 465 PRO C 107 REMARK 465 GLN C 108 REMARK 465 THR C 109 REMARK 465 PHE C 110 REMARK 465 PHE C 111 REMARK 465 GLY C 112 REMARK 465 LEU C 113 REMARK 465 ILE C 114 REMARK 465 ALA C 123 REMARK 465 ASP C 124 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 57 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 81 CE NZ REMARK 470 GLU A 102 CG CD OE1 OE2 REMARK 470 LYS A 115 CD CE NZ REMARK 470 ARG B 33 NE CZ NH1 NH2 REMARK 470 ARG B 68 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 76 CG CD OE1 OE2 REMARK 470 LYS B 81 CG CD CE NZ REMARK 470 SER C 20 OG REMARK 470 ARG C 25 CG CD NE CZ NH1 NH2 REMARK 470 ARG C 68 CG CD NE CZ NH1 NH2 REMARK 470 ILE C 87 CG1 CG2 CD1 REMARK 470 LEU C 89 CG CD1 CD2 REMARK 470 SER C 95 OG REMARK 470 HIS C 96 CG ND1 CD2 CE1 NE2 REMARK 470 LEU C 97 CG CD1 CD2 REMARK 470 HIS C 100 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 115 CG CD CE NZ REMARK 470 ASP C 116 CG OD1 OD2 REMARK 470 ARG C 117 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 120 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE C 31 -72.25 -110.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 24 SG REMARK 620 2 CYS A 27 SG 112.0 REMARK 620 3 CYS A 90 SG 109.3 101.2 REMARK 620 4 CYS A 93 SG 109.4 113.7 111.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 24 SG REMARK 620 2 CYS B 27 SG 114.0 REMARK 620 3 CYS B 90 SG 106.9 107.1 REMARK 620 4 CYS B 93 SG 105.9 112.7 110.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 24 SG REMARK 620 2 CYS C 27 SG 114.1 REMARK 620 3 CYS C 90 SG 108.4 102.3 REMARK 620 4 CYS C 93 SG 106.7 113.4 111.9 REMARK 620 N 1 2 3 DBREF 8AOQ A 1 124 UNP A4TVL0 A4TVL0_9PROT 1 124 DBREF 8AOQ B 1 124 UNP A4TVL0 A4TVL0_9PROT 1 124 DBREF 8AOQ C 1 124 UNP A4TVL0 A4TVL0_9PROT 1 124 SEQRES 1 A 124 MET PRO LEU ASP ALA GLY GLY GLN ASN SER THR GLN MET SEQRES 2 A 124 VAL LEU ALA PRO GLY ALA SER ILE PHE ARG CYS ARG GLN SEQRES 3 A 124 CYS GLY GLN THR ILE SER ARG ARG ASP TRP LEU LEU PRO SEQRES 4 A 124 MET GLY GLY ASP HIS GLU HIS VAL VAL PHE ASN PRO ALA SEQRES 5 A 124 GLY MET ILE PHE ARG VAL TRP CYS PHE SER LEU ALA GLN SEQRES 6 A 124 GLY LEU ARG LEU ILE GLY ALA PRO SER GLY GLU PHE SER SEQRES 7 A 124 TRP PHE LYS GLY TYR ASP TRP THR ILE ALA LEU CYS GLY SEQRES 8 A 124 GLN CYS GLY SER HIS LEU GLY TRP HIS TYR GLU GLY GLY SEQRES 9 A 124 SER GLN PRO GLN THR PHE PHE GLY LEU ILE LYS ASP ARG SEQRES 10 A 124 LEU ALA GLU GLY PRO ALA ASP SEQRES 1 B 124 MET PRO LEU ASP ALA GLY GLY GLN ASN SER THR GLN MET SEQRES 2 B 124 VAL LEU ALA PRO GLY ALA SER ILE PHE ARG CYS ARG GLN SEQRES 3 B 124 CYS GLY GLN THR ILE SER ARG ARG ASP TRP LEU LEU PRO SEQRES 4 B 124 MET GLY GLY ASP HIS GLU HIS VAL VAL PHE ASN PRO ALA SEQRES 5 B 124 GLY MET ILE PHE ARG VAL TRP CYS PHE SER LEU ALA GLN SEQRES 6 B 124 GLY LEU ARG LEU ILE GLY ALA PRO SER GLY GLU PHE SER SEQRES 7 B 124 TRP PHE LYS GLY TYR ASP TRP THR ILE ALA LEU CYS GLY SEQRES 8 B 124 GLN CYS GLY SER HIS LEU GLY TRP HIS TYR GLU GLY GLY SEQRES 9 B 124 SER GLN PRO GLN THR PHE PHE GLY LEU ILE LYS ASP ARG SEQRES 10 B 124 LEU ALA GLU GLY PRO ALA ASP SEQRES 1 C 124 MET PRO LEU ASP ALA GLY GLY GLN ASN SER THR GLN MET SEQRES 2 C 124 VAL LEU ALA PRO GLY ALA SER ILE PHE ARG CYS ARG GLN SEQRES 3 C 124 CYS GLY GLN THR ILE SER ARG ARG ASP TRP LEU LEU PRO SEQRES 4 C 124 MET GLY GLY ASP HIS GLU HIS VAL VAL PHE ASN PRO ALA SEQRES 5 C 124 GLY MET ILE PHE ARG VAL TRP CYS PHE SER LEU ALA GLN SEQRES 6 C 124 GLY LEU ARG LEU ILE GLY ALA PRO SER GLY GLU PHE SER SEQRES 7 C 124 TRP PHE LYS GLY TYR ASP TRP THR ILE ALA LEU CYS GLY SEQRES 8 C 124 GLN CYS GLY SER HIS LEU GLY TRP HIS TYR GLU GLY GLY SEQRES 9 C 124 SER GLN PRO GLN THR PHE PHE GLY LEU ILE LYS ASP ARG SEQRES 10 C 124 LEU ALA GLU GLY PRO ALA ASP HET ZN A 201 1 HET N8F A 202 18 HET ZN B 201 1 HET N8F B 202 18 HET ZN C 201 1 HETNAM ZN ZINC ION HETNAM N8F (3~{S})-3-(PHENYLSULFONYLMETHYL)PIPERIDINE-2,6-DIONE FORMUL 4 ZN 3(ZN 2+) FORMUL 5 N8F 2(C12 H13 N O4 S) FORMUL 9 HOH *45(H2 O) HELIX 1 AA1 ASP A 35 LEU A 37 5 3 HELIX 2 AA2 PRO A 39 ASP A 43 5 5 HELIX 3 AA3 ASP B 35 LEU B 37 5 3 HELIX 4 AA4 PRO B 39 ASP B 43 5 5 SHEET 1 AA1 3 THR A 30 ARG A 33 0 SHEET 2 AA1 3 ILE A 21 CYS A 24 -1 N PHE A 22 O SER A 32 SHEET 3 AA1 3 LEU A 118 GLY A 121 -1 O ALA A 119 N ARG A 23 SHEET 1 AA2 6 GLU A 45 PHE A 49 0 SHEET 2 AA2 6 ILE A 55 PHE A 61 -1 O VAL A 58 N HIS A 46 SHEET 3 AA2 6 PHE A 110 ILE A 114 -1 O PHE A 111 N PHE A 61 SHEET 4 AA2 6 HIS A 96 GLU A 102 -1 N TYR A 101 O PHE A 110 SHEET 5 AA2 6 ASP A 84 CYS A 90 -1 N ASP A 84 O GLU A 102 SHEET 6 AA2 6 LEU A 67 SER A 74 -1 N SER A 74 O TRP A 85 SHEET 1 AA3 3 THR B 30 ARG B 33 0 SHEET 2 AA3 3 SER B 20 CYS B 24 -1 N PHE B 22 O SER B 32 SHEET 3 AA3 3 LEU B 118 PRO B 122 -1 O ALA B 119 N ARG B 23 SHEET 1 AA4 6 GLU B 45 PHE B 49 0 SHEET 2 AA4 6 ILE B 55 PHE B 61 -1 O VAL B 58 N HIS B 46 SHEET 3 AA4 6 PHE B 110 ILE B 114 -1 O PHE B 111 N PHE B 61 SHEET 4 AA4 6 HIS B 96 GLU B 102 -1 N TYR B 101 O PHE B 110 SHEET 5 AA4 6 ASP B 84 CYS B 90 -1 N ASP B 84 O GLU B 102 SHEET 6 AA4 6 LEU B 67 SER B 74 -1 N SER B 74 O TRP B 85 SHEET 1 AA5 3 THR C 30 SER C 32 0 SHEET 2 AA5 3 ILE C 21 CYS C 24 -1 N PHE C 22 O SER C 32 SHEET 3 AA5 3 LEU C 118 GLY C 121 -1 O ALA C 119 N ARG C 23 SHEET 1 AA6 3 LEU C 67 ARG C 68 0 SHEET 2 AA6 3 ALA C 88 CYS C 90 -1 O LEU C 89 N ARG C 68 SHEET 3 AA6 3 HIS C 96 GLY C 98 -1 O GLY C 98 N ALA C 88 LINK SG CYS A 24 ZN ZN A 201 1555 1555 2.31 LINK SG CYS A 27 ZN ZN A 201 1555 1555 2.34 LINK SG CYS A 90 ZN ZN A 201 1555 1555 2.33 LINK SG CYS A 93 ZN ZN A 201 1555 1555 2.31 LINK SG CYS B 24 ZN ZN B 201 1555 1555 2.37 LINK SG CYS B 27 ZN ZN B 201 1555 1555 2.35 LINK SG CYS B 90 ZN ZN B 201 1555 1555 2.31 LINK SG CYS B 93 ZN ZN B 201 1555 1555 2.37 LINK SG CYS C 24 ZN ZN C 201 1555 1555 2.35 LINK SG CYS C 27 ZN ZN C 201 1555 1555 2.35 LINK SG CYS C 90 ZN ZN C 201 1555 1555 2.35 LINK SG CYS C 93 ZN ZN C 201 1555 1555 2.35 CISPEP 1 GLN A 106 PRO A 107 0 -3.97 CISPEP 2 GLN B 106 PRO B 107 0 -4.38 CRYST1 56.660 59.169 88.334 90.00 90.00 90.00 P 21 21 21 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017649 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016901 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011321 0.00000