HEADER CELL INVASION 18-AUG-22 8AS9 TITLE CRYSTAL STRUCTURE OF THE TALIN-KANK1 COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: B-CELL LYMPHOMA 6 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BCL-6,B-CELL LYMPHOMA 5 PROTEIN,BCL-5,PROTEIN LAZ-3,ZINC COMPND 5 FINGER AND BTB DOMAIN-CONTAINING PROTEIN 27,ZINC FINGER PROTEIN 51; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: RECOMBINANT PROTEIN; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: KN-MOTIF NCOR1 BBD FUSION,NUCLEAR RECEPTOR COREPRESSOR 1; COMPND 10 CHAIN: D; COMPND 11 SYNONYM: N-COR,N-COR1; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: TALIN-1; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BCL6, BCL5, LAZ3, ZBTB27, ZNF51; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 MOL_ID: 3; SOURCE 14 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 15 ORGANISM_COMMON: MOUSE; SOURCE 16 ORGANISM_TAXID: 10090; SOURCE 17 GENE: TLN1, TLN; SOURCE 18 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 19 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS CELL-MIGRATION, TALIN, KANK, FOCAL ADHESIONS, CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR T.ZACHARCHENKO REVDAT 4 07-FEB-24 8AS9 1 REMARK REVDAT 3 15-NOV-23 8AS9 1 SOURCE REVDAT 2 12-JUL-23 8AS9 1 JRNL REVDAT 1 07-JUN-23 8AS9 0 JRNL AUTH X.LI,B.T.GOULT,C.BALLESTREM,T.ZACHARCHENKO JRNL TITL THE STRUCTURAL BASIS OF THE TALIN-KANK1 INTERACTION THAT JRNL TITL 2 COORDINATES THE ACTIN AND MICROTUBULE CYTOSKELETONS AT FOCAL JRNL TITL 3 ADHESIONS. JRNL REF OPEN BIOLOGY V. 13 30058 2023 JRNL REFN ESSN 2046-2441 JRNL PMID 37339751 JRNL DOI 10.1098/RSOB.230058 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 59.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 17222 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 866 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 59.7600 - 6.1800 1.00 2810 161 0.2073 0.2651 REMARK 3 2 6.1700 - 4.9000 1.00 2728 158 0.2565 0.2931 REMARK 3 3 4.9000 - 4.2800 1.00 2750 137 0.2063 0.2446 REMARK 3 4 4.2800 - 3.8900 1.00 2731 128 0.2490 0.2968 REMARK 3 5 3.8900 - 3.6100 1.00 2703 145 0.3189 0.3180 REMARK 3 6 3.6100 - 3.4000 0.97 2634 137 0.3932 0.4027 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.660 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 107.3 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 127.6 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 7 THROUGH 127) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0931 -36.2109 55.1051 REMARK 3 T TENSOR REMARK 3 T11: 0.6731 T22: 0.6870 REMARK 3 T33: 0.8568 T12: 0.0518 REMARK 3 T13: 0.0668 T23: -0.0584 REMARK 3 L TENSOR REMARK 3 L11: 3.4466 L22: 3.4239 REMARK 3 L33: 3.9384 L12: 0.0248 REMARK 3 L13: 0.2077 L23: 1.3721 REMARK 3 S TENSOR REMARK 3 S11: -0.0671 S12: -0.1772 S13: 0.1925 REMARK 3 S21: -0.0780 S22: 0.3348 S23: -0.2572 REMARK 3 S31: -0.1700 S32: 0.6668 S33: -0.2515 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID -4 THROUGH 128) REMARK 3 ORIGIN FOR THE GROUP (A): 10.4701 -36.1992 58.8752 REMARK 3 T TENSOR REMARK 3 T11: 0.7014 T22: 0.5615 REMARK 3 T33: 0.8653 T12: 0.0178 REMARK 3 T13: 0.0306 T23: -0.0580 REMARK 3 L TENSOR REMARK 3 L11: 3.2048 L22: 1.7738 REMARK 3 L33: 2.1499 L12: -1.0371 REMARK 3 L13: -0.1801 L23: -0.0655 REMARK 3 S TENSOR REMARK 3 S11: 0.0692 S12: -0.0956 S13: -0.1782 REMARK 3 S21: 0.1155 S22: 0.1126 S23: 0.2152 REMARK 3 S31: -0.0311 S32: -0.5248 S33: -0.2109 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN 'D' AND RESID 1 THROUGH 51) REMARK 3 ORIGIN FOR THE GROUP (A): 19.9066 -27.6529 36.6773 REMARK 3 T TENSOR REMARK 3 T11: 1.4937 T22: 1.7382 REMARK 3 T33: 1.5205 T12: 0.1612 REMARK 3 T13: 0.2836 T23: -0.0641 REMARK 3 L TENSOR REMARK 3 L11: 1.0889 L22: 1.3183 REMARK 3 L33: 0.0446 L12: -0.7252 REMARK 3 L13: 0.0688 L23: 0.1533 REMARK 3 S TENSOR REMARK 3 S11: -0.2441 S12: -0.0555 S13: 0.0460 REMARK 3 S21: -0.2070 S22: 0.4712 S23: -0.6964 REMARK 3 S31: 0.1028 S32: -0.4076 S33: -0.1936 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN 'C' AND RESID 1354 THROUGH 1659) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0384 -20.6378 44.7821 REMARK 3 T TENSOR REMARK 3 T11: 0.9491 T22: 1.2111 REMARK 3 T33: 1.1172 T12: 0.0915 REMARK 3 T13: 0.0165 T23: -0.1581 REMARK 3 L TENSOR REMARK 3 L11: 0.7875 L22: 1.7449 REMARK 3 L33: 3.3350 L12: 0.2951 REMARK 3 L13: -0.0007 L23: -1.1743 REMARK 3 S TENSOR REMARK 3 S11: -0.2294 S12: 0.1997 S13: -0.3393 REMARK 3 S21: -0.4644 S22: 0.1629 S23: 0.5164 REMARK 3 S31: 0.0590 S32: -1.2193 S33: 0.0900 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AS9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292125001. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JAN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17332 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.400 REMARK 200 RESOLUTION RANGE LOW (A) : 61.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 20.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6XYX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1M AMMONIUM SULFATE, 0.1M CHES 9.5, REMARK 280 0.2M SODIUM CHLORIDE, 6 % (V/V) GLYCEROL, PH 6.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 103.51100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 59.76210 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 50.61967 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 103.51100 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 59.76210 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 50.61967 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 103.51100 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 59.76210 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 50.61967 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 103.51100 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 59.76210 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 50.61967 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 103.51100 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 59.76210 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 50.61967 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 103.51100 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 59.76210 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 50.61967 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 119.52421 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 101.23933 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 119.52421 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 101.23933 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 119.52421 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 101.23933 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 119.52421 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 101.23933 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 119.52421 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 101.23933 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 119.52421 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 101.23933 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DODECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DODECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 41040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 80460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -439.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 S SO4 C1702 LIES ON A SPECIAL POSITION. REMARK 375 O2 SO4 C1702 LIES ON A SPECIAL POSITION. REMARK 375 O1 SO4 C1703 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -7 REMARK 465 PRO A -6 REMARK 465 SER A -5 REMARK 465 SER A -4 REMARK 465 ASP A -3 REMARK 465 LEU A -2 REMARK 465 TYR A -1 REMARK 465 LEU A 0 REMARK 465 ARG A 1 REMARK 465 PRO A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 ASP A 6 REMARK 465 SER A 128 REMARK 465 GLU A 129 REMARK 465 GLY B -7 REMARK 465 PRO B -6 REMARK 465 SER B -5 REMARK 465 GLU B 129 REMARK 465 ASN D 27 REMARK 465 THR D 28 REMARK 465 ILE D 29 REMARK 465 LYS D 30 REMARK 465 LYS D 31 REMARK 465 GLY D 32 REMARK 465 GLY D 33 REMARK 465 GLY D 34 REMARK 465 GLY D 35 REMARK 465 GLY C 1351 REMARK 465 ILE C 1352 REMARK 465 ASP C 1353 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 39 -108.27 56.01 REMARK 500 ASN A 68 50.09 -107.01 REMARK 500 SER A 93 17.46 57.93 REMARK 500 MET A 114 78.03 -111.48 REMARK 500 ARG B 40 19.66 58.72 REMARK 500 ASN B 68 48.14 -96.40 REMARK 500 TYR D 2 -52.52 -161.30 REMARK 500 THR C1356 17.75 56.91 REMARK 500 ASN C1379 83.80 -160.18 REMARK 500 ASN C1385 -148.29 -145.14 REMARK 500 PRO C1464 35.02 -71.98 REMARK 500 PRO C1484 70.11 -65.78 REMARK 500 THR C1487 -152.85 -89.43 REMARK 500 GLN C1488 -148.99 -78.54 REMARK 500 ALA C1489 -60.60 60.71 REMARK 500 GLN C1490 76.09 -62.71 REMARK 500 ALA C1545 -164.38 -106.22 REMARK 500 ASP C1547 -68.90 -95.25 REMARK 500 GLU C1552 33.41 38.84 REMARK 500 ASN C1554 13.34 -146.59 REMARK 500 SER C1577 70.82 -108.13 REMARK 500 PRO C1579 170.05 -57.55 REMARK 500 GLU C1580 -48.81 63.29 REMARK 500 ASP C1626 89.92 -161.65 REMARK 500 LYS C1654 47.15 -98.87 REMARK 500 REMARK 500 REMARK: NULL DBREF 8AS9 A 6 129 UNP P41182 BCL6_HUMAN 6 129 DBREF 8AS9 B 6 129 UNP P41182 BCL6_HUMAN 6 129 DBREF 8AS9 D 1 31 UNP Q8BRZ8 Q8BRZ8_MOUSE 30 60 DBREF 8AS9 D 36 51 UNP O75376 NCOR1_HUMAN 1341 1356 DBREF 8AS9 C 1359 1659 UNP P26039 TLN1_MOUSE 1359 1659 SEQADV 8AS9 GLY A -7 UNP P41182 EXPRESSION TAG SEQADV 8AS9 PRO A -6 UNP P41182 EXPRESSION TAG SEQADV 8AS9 SER A -5 UNP P41182 EXPRESSION TAG SEQADV 8AS9 SER A -4 UNP P41182 EXPRESSION TAG SEQADV 8AS9 ASP A -3 UNP P41182 EXPRESSION TAG SEQADV 8AS9 LEU A -2 UNP P41182 EXPRESSION TAG SEQADV 8AS9 TYR A -1 UNP P41182 EXPRESSION TAG SEQADV 8AS9 LEU A 0 UNP P41182 EXPRESSION TAG SEQADV 8AS9 ARG A 1 UNP P41182 EXPRESSION TAG SEQADV 8AS9 PRO A 2 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLY A 3 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLY A 4 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLY A 5 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLN A 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 8AS9 ARG A 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 8AS9 ASN A 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQADV 8AS9 GLY B -7 UNP P41182 EXPRESSION TAG SEQADV 8AS9 PRO B -6 UNP P41182 EXPRESSION TAG SEQADV 8AS9 SER B -5 UNP P41182 EXPRESSION TAG SEQADV 8AS9 SER B -4 UNP P41182 EXPRESSION TAG SEQADV 8AS9 ASP B -3 UNP P41182 EXPRESSION TAG SEQADV 8AS9 LEU B -2 UNP P41182 EXPRESSION TAG SEQADV 8AS9 TYR B -1 UNP P41182 EXPRESSION TAG SEQADV 8AS9 LEU B 0 UNP P41182 EXPRESSION TAG SEQADV 8AS9 ARG B 1 UNP P41182 EXPRESSION TAG SEQADV 8AS9 PRO B 2 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLY B 3 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLY B 4 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLY B 5 UNP P41182 EXPRESSION TAG SEQADV 8AS9 GLN B 8 UNP P41182 CYS 8 ENGINEERED MUTATION SEQADV 8AS9 ARG B 67 UNP P41182 CYS 67 ENGINEERED MUTATION SEQADV 8AS9 ASN B 84 UNP P41182 CYS 84 ENGINEERED MUTATION SEQADV 8AS9 GLY D 32 UNP Q8BRZ8 LINKER SEQADV 8AS9 GLY D 33 UNP Q8BRZ8 LINKER SEQADV 8AS9 GLY D 34 UNP Q8BRZ8 LINKER SEQADV 8AS9 GLY D 35 UNP Q8BRZ8 LINKER SEQADV 8AS9 GLY C 1351 UNP P26039 EXPRESSION TAG SEQADV 8AS9 ILE C 1352 UNP P26039 EXPRESSION TAG SEQADV 8AS9 ASP C 1353 UNP P26039 EXPRESSION TAG SEQADV 8AS9 PRO C 1354 UNP P26039 EXPRESSION TAG SEQADV 8AS9 PHE C 1355 UNP P26039 EXPRESSION TAG SEQADV 8AS9 THR C 1356 UNP P26039 EXPRESSION TAG SEQADV 8AS9 LYS C 1357 UNP P26039 EXPRESSION TAG SEQADV 8AS9 HIS C 1358 UNP P26039 EXPRESSION TAG SEQRES 1 A 137 GLY PRO SER SER ASP LEU TYR LEU ARG PRO GLY GLY GLY SEQRES 2 A 137 ASP SER GLN ILE GLN PHE THR ARG HIS ALA SER ASP VAL SEQRES 3 A 137 LEU LEU ASN LEU ASN ARG LEU ARG SER ARG ASP ILE LEU SEQRES 4 A 137 THR ASP VAL VAL ILE VAL VAL SER ARG GLU GLN PHE ARG SEQRES 5 A 137 ALA HIS LYS THR VAL LEU MET ALA CYS SER GLY LEU PHE SEQRES 6 A 137 TYR SER ILE PHE THR ASP GLN LEU LYS ARG ASN LEU SER SEQRES 7 A 137 VAL ILE ASN LEU ASP PRO GLU ILE ASN PRO GLU GLY PHE SEQRES 8 A 137 ASN ILE LEU LEU ASP PHE MET TYR THR SER ARG LEU ASN SEQRES 9 A 137 LEU ARG GLU GLY ASN ILE MET ALA VAL MET ALA THR ALA SEQRES 10 A 137 MET TYR LEU GLN MET GLU HIS VAL VAL ASP THR CYS ARG SEQRES 11 A 137 LYS PHE ILE LYS ALA SER GLU SEQRES 1 B 137 GLY PRO SER SER ASP LEU TYR LEU ARG PRO GLY GLY GLY SEQRES 2 B 137 ASP SER GLN ILE GLN PHE THR ARG HIS ALA SER ASP VAL SEQRES 3 B 137 LEU LEU ASN LEU ASN ARG LEU ARG SER ARG ASP ILE LEU SEQRES 4 B 137 THR ASP VAL VAL ILE VAL VAL SER ARG GLU GLN PHE ARG SEQRES 5 B 137 ALA HIS LYS THR VAL LEU MET ALA CYS SER GLY LEU PHE SEQRES 6 B 137 TYR SER ILE PHE THR ASP GLN LEU LYS ARG ASN LEU SER SEQRES 7 B 137 VAL ILE ASN LEU ASP PRO GLU ILE ASN PRO GLU GLY PHE SEQRES 8 B 137 ASN ILE LEU LEU ASP PHE MET TYR THR SER ARG LEU ASN SEQRES 9 B 137 LEU ARG GLU GLY ASN ILE MET ALA VAL MET ALA THR ALA SEQRES 10 B 137 MET TYR LEU GLN MET GLU HIS VAL VAL ASP THR CYS ARG SEQRES 11 B 137 LYS PHE ILE LYS ALA SER GLU SEQRES 1 D 51 PRO TYR PHE VAL GLU THR PRO TYR GLY PHE GLN LEU ASP SEQRES 2 D 51 LEU ASP PHE VAL LYS TYR VAL ASP ASP ILE GLN LYS GLY SEQRES 3 D 51 ASN THR ILE LYS LYS GLY GLY GLY GLY ILE THR THR ILE SEQRES 4 D 51 LYS GLU MET GLY ARG SER ILE HIS GLU ILE PRO ARG SEQRES 1 C 309 GLY ILE ASP PRO PHE THR LYS HIS GLY GLN LYS GLU CYS SEQRES 2 C 309 ASP ASN ALA LEU ARG GLN LEU GLU THR VAL ARG GLU LEU SEQRES 3 C 309 LEU GLU ASN PRO VAL GLN PRO ILE ASN ASP MET SER TYR SEQRES 4 C 309 PHE GLY CYS LEU ASP SER VAL MET GLU ASN SER LYS VAL SEQRES 5 C 309 LEU GLY GLU ALA MET THR GLY ILE SER GLN ASN ALA LYS SEQRES 6 C 309 ASN GLY ASN LEU PRO GLU PHE GLY ASP ALA ILE ALA THR SEQRES 7 C 309 ALA SER LYS ALA LEU CYS GLY PHE THR GLU ALA ALA ALA SEQRES 8 C 309 GLN ALA ALA TYR LEU VAL GLY VAL SER ASP PRO ASN SER SEQRES 9 C 309 GLN ALA GLY GLN GLN GLY LEU VAL GLU PRO THR GLN PHE SEQRES 10 C 309 ALA ARG ALA ASN GLN ALA ILE GLN MET ALA CYS GLN SER SEQRES 11 C 309 LEU GLY GLU PRO GLY CYS THR GLN ALA GLN VAL LEU SER SEQRES 12 C 309 ALA ALA THR ILE VAL ALA LYS HIS THR SER ALA LEU CYS SEQRES 13 C 309 ASN SER CYS ARG LEU ALA SER ALA ARG THR ALA ASN PRO SEQRES 14 C 309 THR ALA LYS ARG GLN PHE VAL GLN SER ALA LYS GLU VAL SEQRES 15 C 309 ALA ASN SER THR ALA ASN LEU VAL LYS THR ILE LYS ALA SEQRES 16 C 309 LEU ASP GLY ASP PHE THR GLU GLU ASN ARG ALA GLN CYS SEQRES 17 C 309 ARG ALA ALA THR ALA PRO LEU LEU GLU ALA VAL ASP ASN SEQRES 18 C 309 LEU SER ALA PHE ALA SER ASN PRO GLU PHE SER SER VAL SEQRES 19 C 309 PRO ALA GLN ILE SER PRO GLU GLY ARG ALA ALA MET GLU SEQRES 20 C 309 PRO ILE VAL ILE SER ALA LYS THR MET LEU GLU SER ALA SEQRES 21 C 309 GLY GLY LEU ILE GLN THR ALA ARG ALA LEU ALA VAL ASN SEQRES 22 C 309 PRO ARG ASP PRO PRO ARG TRP SER VAL LEU ALA GLY HIS SEQRES 23 C 309 SER ARG THR VAL SER ASP SER ILE LYS LYS LEU ILE THR SEQRES 24 C 309 SER MET ARG ASP LYS ALA PRO GLY GLN LEU HET SO4 A 201 5 HET SO4 A 202 5 HET GOL C1701 6 HET SO4 C1702 5 HET SO4 C1703 5 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 SO4 4(O4 S 2-) FORMUL 7 GOL C3 H8 O3 HELIX 1 AA1 ARG A 13 ARG A 28 1 16 HELIX 2 AA2 HIS A 46 SER A 54 1 9 HELIX 3 AA3 SER A 54 ASP A 63 1 10 HELIX 4 AA4 GLN A 64 ARG A 67 5 4 HELIX 5 AA5 ASN A 79 SER A 93 1 15 HELIX 6 AA6 ASN A 101 LEU A 112 1 12 HELIX 7 AA7 MET A 114 ALA A 127 1 14 HELIX 8 AA8 ARG B 13 ARG B 28 1 16 HELIX 9 AA9 HIS B 46 SER B 54 1 9 HELIX 10 AB1 SER B 54 ASP B 63 1 10 HELIX 11 AB2 GLN B 64 ARG B 67 5 4 HELIX 12 AB3 ASN B 79 SER B 93 1 15 HELIX 13 AB4 ASN B 101 LEU B 112 1 12 HELIX 14 AB5 MET B 114 LYS B 126 1 13 HELIX 15 AB6 PRO D 7 GLY D 9 5 3 HELIX 16 AB7 LEU D 14 LYS D 25 1 12 HELIX 17 AB8 THR C 1356 GLU C 1378 1 23 HELIX 18 AB9 SER C 1388 ASN C 1416 1 29 HELIX 19 AC1 ASN C 1418 SER C 1450 1 33 HELIX 20 AC2 THR C 1465 GLN C 1479 1 15 HELIX 21 AC3 SER C 1480 GLY C 1482 5 3 HELIX 22 AC4 VAL C 1491 ALA C 1514 1 24 HELIX 23 AC5 ASN C 1518 ALA C 1545 1 28 HELIX 24 AC6 ASN C 1554 ALA C 1576 1 23 HELIX 25 AC7 SER C 1589 ASN C 1623 1 35 HELIX 26 AC8 ASP C 1626 LYS C 1654 1 29 SHEET 1 AA1 2 GLN A 8 GLN A 10 0 SHEET 2 AA1 2 ARG B 94 ASN B 96 -1 O LEU B 95 N ILE A 9 SHEET 1 AA2 3 ARG A 44 ALA A 45 0 SHEET 2 AA2 3 VAL A 34 VAL A 37 -1 N VAL A 34 O ALA A 45 SHEET 3 AA2 3 VAL A 71 ASN A 73 1 O ILE A 72 N VAL A 35 SHEET 1 AA3 3 ARG A 94 ARG A 98 0 SHEET 2 AA3 3 ASP B 6 PHE B 11 -1 O ILE B 9 N LEU A 95 SHEET 3 AA3 3 THR D 37 GLU D 41 1 O ILE D 39 N GLN B 10 SHEET 1 AA4 3 GLN B 42 ALA B 45 0 SHEET 2 AA4 3 VAL B 34 VAL B 37 -1 N ILE B 36 O PHE B 43 SHEET 3 AA4 3 VAL B 71 ASN B 73 1 O ILE B 72 N VAL B 37 SHEET 1 AA5 2 PHE D 3 GLU D 5 0 SHEET 2 AA5 2 GLN D 11 ASP D 13 -1 O LEU D 12 N VAL D 4 CRYST1 207.022 207.022 151.859 90.00 90.00 120.00 H 3 2 36 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004830 0.002789 0.000000 0.00000 SCALE2 0.000000 0.005578 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006585 0.00000 CONECT 4683 4684 4685 4686 4687 CONECT 4684 4683 CONECT 4685 4683 CONECT 4686 4683 CONECT 4687 4683 CONECT 4688 4689 4690 4691 4692 CONECT 4689 4688 CONECT 4690 4688 CONECT 4691 4688 CONECT 4692 4688 CONECT 4693 4694 4695 CONECT 4694 4693 CONECT 4695 4693 4696 4697 CONECT 4696 4695 CONECT 4697 4695 4698 CONECT 4698 4697 CONECT 4699 4700 4701 4702 4703 CONECT 4700 4699 CONECT 4701 4699 CONECT 4702 4699 CONECT 4703 4699 CONECT 4704 4705 4706 4707 4708 CONECT 4705 4704 CONECT 4706 4704 CONECT 4707 4704 CONECT 4708 4704 MASTER 411 0 5 26 13 0 0 6 4675 4 26 50 END