HEADER METAL BINDING PROTEIN 22-AUG-22 8AT8 TITLE STRUCTURE OF COPROPORPHYRIN III-LMCPFC COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERROCHELATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HEME SYNTHASE,PROTOHEME FERRO-LYASE; COMPND 5 EC: 4.99.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: HEMH, A4G43_07995, AF115_13645, AP101_13400, AP103_13395, SOURCE 5 AP112_12715, AP127_13135, AP130_13225, APD66_13050, ARS86_05675, SOURCE 6 B1N21_11380, B4Y57_13635, B5G78_12175, B5H07_07285, BRS71_03785, SOURCE 7 D3X95_05200, D3Y03_05130, D8K64_06195, EAJ22_07595, EAX63_13360, SOURCE 8 EFX44_12300, SG10_07760; SOURCE 9 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FERRROCHELATASE ACTIVITY, METAL ION BINDING, METAL BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.GABLER,S.HOFBAUER REVDAT 3 31-JAN-24 8AT8 1 REMARK REVDAT 2 11-JAN-23 8AT8 1 JRNL REVDAT 1 28-DEC-22 8AT8 0 JRNL AUTH A.DALI,T.GABLER,F.SEBASTIANI,A.DESTINGER,P.G.FURTMULLER, JRNL AUTH 2 V.PFANZAGL,M.BECUCCI,G.SMULEVICH,S.HOFBAUER JRNL TITL ACTIVE SITE ARCHITECTURE OF COPROPORPHYRIN FERROCHELATASE JRNL TITL 2 WITH ITS PHYSIOLOGICAL SUBSTRATE COPROPORPHYRIN III: JRNL TITL 3 PROPIONATE INTERACTIONS AND PORPHYRIN CORE DEFORMATION. JRNL REF PROTEIN SCI. V. 32 E4534 2023 JRNL REFN ESSN 1469-896X JRNL PMID 36479958 JRNL DOI 10.1002/PRO.4534 REMARK 2 REMARK 2 RESOLUTION. 1.51 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.51 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 48370 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.148 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 2346 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.7800 - 3.8800 1.00 2794 151 0.1462 0.1857 REMARK 3 2 3.8800 - 3.0800 1.00 2740 154 0.1288 0.1669 REMARK 3 3 3.0800 - 2.6900 1.00 2755 135 0.1360 0.1668 REMARK 3 4 2.6900 - 2.4400 1.00 2742 139 0.1340 0.1766 REMARK 3 5 2.4400 - 2.2700 0.92 2525 133 0.1286 0.1697 REMARK 3 6 2.2700 - 2.1400 0.98 2673 133 0.1289 0.1551 REMARK 3 7 2.1400 - 2.0300 0.99 2726 133 0.1419 0.1724 REMARK 3 8 2.0300 - 1.9400 0.99 2664 154 0.1424 0.1906 REMARK 3 9 1.9400 - 1.8700 0.99 2732 137 0.1357 0.1652 REMARK 3 10 1.8700 - 1.8000 1.00 2710 121 0.1426 0.1625 REMARK 3 11 1.8000 - 1.7400 1.00 2722 142 0.1617 0.2055 REMARK 3 12 1.7400 - 1.6900 1.00 2720 137 0.1805 0.2017 REMARK 3 13 1.6900 - 1.6500 1.00 2718 146 0.2055 0.2635 REMARK 3 14 1.6500 - 1.6100 1.00 2728 122 0.2112 0.2410 REMARK 3 15 1.6100 - 1.5700 1.00 2711 138 0.2070 0.2036 REMARK 3 16 1.5700 - 1.5400 1.00 2721 141 0.2177 0.2359 REMARK 3 17 1.5400 - 1.5100 1.00 2715 130 0.2511 0.2631 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.158 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.205 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2685 REMARK 3 ANGLE : 1.055 3656 REMARK 3 CHIRALITY : 0.065 372 REMARK 3 PLANARITY : 0.011 490 REMARK 3 DIHEDRAL : 5.942 394 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9557 14.3913 8.4017 REMARK 3 T TENSOR REMARK 3 T11: 0.2099 T22: 0.1656 REMARK 3 T33: 0.0993 T12: 0.0375 REMARK 3 T13: -0.0177 T23: 0.0196 REMARK 3 L TENSOR REMARK 3 L11: 1.1745 L22: 8.7621 REMARK 3 L33: 2.2360 L12: 0.7179 REMARK 3 L13: -0.0087 L23: 3.1566 REMARK 3 S TENSOR REMARK 3 S11: 0.0514 S12: 0.0663 S13: 0.1532 REMARK 3 S21: -0.3826 S22: -0.1936 S23: 0.3345 REMARK 3 S31: -0.2861 S32: -0.1435 S33: 0.1415 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.0090 4.7490 8.3984 REMARK 3 T TENSOR REMARK 3 T11: 0.2015 T22: 0.1769 REMARK 3 T33: 0.1150 T12: -0.0002 REMARK 3 T13: 0.0484 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 0.8139 L22: 5.2801 REMARK 3 L33: 1.8855 L12: -0.2283 REMARK 3 L13: -0.0774 L23: 2.1625 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: 0.1194 S13: -0.0478 REMARK 3 S21: -0.2212 S22: -0.0616 S23: -0.1592 REMARK 3 S31: -0.0024 S32: 0.0065 S33: 0.0045 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9412 -1.8894 7.9202 REMARK 3 T TENSOR REMARK 3 T11: 0.1436 T22: 0.1715 REMARK 3 T33: 0.1504 T12: -0.0247 REMARK 3 T13: -0.0242 T23: -0.0318 REMARK 3 L TENSOR REMARK 3 L11: 1.5715 L22: 1.7792 REMARK 3 L33: 6.0213 L12: -0.4366 REMARK 3 L13: 0.8015 L23: 0.1057 REMARK 3 S TENSOR REMARK 3 S11: -0.0126 S12: 0.2365 S13: -0.0931 REMARK 3 S21: -0.3036 S22: -0.0461 S23: 0.2358 REMARK 3 S31: -0.0479 S32: -0.3799 S33: 0.0541 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 150 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.2212 -3.1592 32.4681 REMARK 3 T TENSOR REMARK 3 T11: 0.1432 T22: 0.1005 REMARK 3 T33: 0.1436 T12: -0.0135 REMARK 3 T13: 0.0021 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 2.9545 L22: 2.9850 REMARK 3 L33: 3.3992 L12: -0.5138 REMARK 3 L13: 1.1632 L23: 0.9087 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: -0.0574 S13: -0.0927 REMARK 3 S21: 0.2963 S22: 0.0775 S23: -0.3419 REMARK 3 S31: 0.2616 S32: 0.2062 S33: -0.1010 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 233 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3217 3.7388 30.3460 REMARK 3 T TENSOR REMARK 3 T11: 0.1359 T22: 0.1280 REMARK 3 T33: 0.1208 T12: -0.0039 REMARK 3 T13: 0.0386 T23: -0.0113 REMARK 3 L TENSOR REMARK 3 L11: 2.4119 L22: 1.0637 REMARK 3 L33: 1.0941 L12: -0.5176 REMARK 3 L13: 0.6287 L23: -0.0819 REMARK 3 S TENSOR REMARK 3 S11: 0.0081 S12: -0.0680 S13: -0.0074 REMARK 3 S21: 0.0826 S22: 0.0131 S23: 0.1725 REMARK 3 S31: -0.0483 S32: -0.1566 S33: -0.0272 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 234 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0457 2.7367 26.2288 REMARK 3 T TENSOR REMARK 3 T11: 0.0832 T22: 0.0849 REMARK 3 T33: 0.1153 T12: 0.0099 REMARK 3 T13: 0.0180 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 0.8631 L22: 3.3664 REMARK 3 L33: 3.5599 L12: 0.5791 REMARK 3 L13: 0.6949 L23: 2.2628 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.0065 S13: 0.0108 REMARK 3 S21: 0.0530 S22: -0.0121 S23: -0.1041 REMARK 3 S31: 0.1163 S32: -0.0080 S33: -0.0088 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8AT8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-AUG-22. REMARK 100 THE DEPOSITION ID IS D_1292125023. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9677 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 4M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48370 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.510 REMARK 200 RESOLUTION RANGE LOW (A) : 36.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02909 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.51 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.29620 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.360 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6RWV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18% PEG MME 2000, 0.2 M CALCIUM REMARK 280 ACETAT, 0.1 M BIS-TRIS PH 6.3, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 34.03450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 LYS A 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 169 O HOH A 501 2.05 REMARK 500 O HOH A 669 O HOH A 703 2.13 REMARK 500 O HOH A 511 O HOH A 726 2.15 REMARK 500 O HOH A 705 O HOH A 757 2.15 REMARK 500 OE2 GLU A 19 O HOH A 502 2.15 REMARK 500 O HOH A 605 O HOH A 729 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 701 O HOH A 771 1455 2.17 REMARK 500 O HOH A 675 O HOH A 762 2656 2.17 REMARK 500 O HOH A 579 O HOH A 753 1655 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 113 116.89 -165.78 REMARK 500 SER A 120 -93.64 -110.02 REMARK 500 TRP A 146 18.97 -152.88 REMARK 500 TYR A 270 -60.22 -99.10 REMARK 500 ASN A 290 -129.52 45.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 407 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GOL A 404 O2 REMARK 620 2 GOL A 404 O3 67.7 REMARK 620 3 HOH A 518 O 137.7 86.5 REMARK 620 4 HOH A 558 O 142.5 149.4 71.2 REMARK 620 5 HOH A 564 O 75.2 98.8 144.1 88.4 REMARK 620 6 HOH A 586 O 74.7 139.3 112.8 70.6 86.0 REMARK 620 7 HOH A 625 O 129.9 76.4 69.6 76.3 77.2 143.1 REMARK 620 8 HOH A 720 O 78.2 80.7 64.5 106.7 151.3 76.7 129.5 REMARK 620 N 1 2 3 4 5 6 7 DBREF1 8AT8 A 1 309 UNP A0A3T2BSC5_LISMN DBREF2 8AT8 A A0A3T2BSC5 1 309 SEQADV 8AT8 LEU A 310 UNP A0A3T2BSC EXPRESSION TAG SEQADV 8AT8 GLU A 311 UNP A0A3T2BSC EXPRESSION TAG SEQRES 1 A 311 MET THR LYS LYS VAL GLY LEU LEU VAL MET ALA TYR GLY SEQRES 2 A 311 THR PRO TYR LYS ASP GLU ASP ILE GLU ARG TYR TYR THR SEQRES 3 A 311 ASP ILE ARG HIS GLY HIS LYS PRO SER GLU GLU MET ILE SEQRES 4 A 311 ALA ASP LEU ARG GLY ARG TYR HIS ALA ILE GLY GLY LEU SEQRES 5 A 311 SER PRO LEU ALA LYS ILE THR GLU ALA GLN ALA TYR GLY SEQRES 6 A 311 LEU GLU LYS ALA LEU ASN ASP SER GLN ASP GLU VAL GLU SEQRES 7 A 311 PHE LYS ALA TYR ILE GLY LEU LYS HIS ILE GLU PRO PHE SEQRES 8 A 311 ILE GLU ASP ALA VAL GLU ALA MET HIS LYS ASP GLY ILE SEQRES 9 A 311 GLU GLU ALA ILE SER ILE VAL LEU ALA PRO HIS TYR SER SEQRES 10 A 311 SER PHE SER VAL GLU ALA TYR ASN LYS ARG ALA LYS GLU SEQRES 11 A 311 ALA ALA ASP LYS LEU GLY GLY PRO ARG ILE ASN ALA ILE SEQRES 12 A 311 ASN ASP TRP TYR LYS GLN PRO LYS PHE ILE GLN MET TRP SEQRES 13 A 311 ALA ASP ARG ILE ASN GLU THR ALA LYS GLN ILE PRO ALA SEQRES 14 A 311 ASP GLU LEU LEU ASP THR VAL LEU ILE VAL SER ALA HIS SEQRES 15 A 311 SER LEU PRO GLU LYS ILE LYS GLN HIS ASN ASP PRO TYR SEQRES 16 A 311 PRO ASN GLN LEU GLN GLU THR ALA ASP PHE ILE PHE GLU SEQRES 17 A 311 LYS VAL VAL VAL PRO HIS TYR ALA LEU GLY TRP GLN SER SEQRES 18 A 311 GLU GLY LYS THR GLY GLU PRO TRP LEU GLY PRO ASP VAL SEQRES 19 A 311 GLN ASP LEU THR ARG GLU LEU TYR GLY ARG GLU LYS TYR SEQRES 20 A 311 LYS HIS PHE ILE TYR THR PRO VAL GLY PHE VAL ALA GLU SEQRES 21 A 311 HIS LEU GLU VAL LEU TYR ASP ASN ASP TYR GLU CYS LYS SEQRES 22 A 311 VAL VAL THR ASP GLU VAL GLY ALA ALA TYR HIS ARG PRO SEQRES 23 A 311 PRO MET PRO ASN SER ASP PRO GLU PHE LEU GLU VAL LEU SEQRES 24 A 311 ARG THR VAL VAL TRP GLU LYS TYR SER ASN LEU GLU HET ACT A 401 7 HET ACT A 402 7 HET ACT A 403 7 HET GOL A 404 13 HET EDO A 405 10 HET HT9 A 406 82 HET CA A 407 1 HETNAM ACT ACETATE ION HETNAM GOL GLYCEROL HETNAM EDO 1,2-ETHANEDIOL HETNAM HT9 COPROPORPHYRIN III HETNAM CA CALCIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 ACT 3(C2 H3 O2 1-) FORMUL 5 GOL C3 H8 O3 FORMUL 6 EDO C2 H6 O2 FORMUL 7 HT9 C36 H38 N4 O8 FORMUL 8 CA CA 2+ FORMUL 9 HOH *299(H2 O) HELIX 1 AA1 LYS A 17 GLU A 19 5 3 HELIX 2 AA2 ASP A 20 ARG A 29 1 10 HELIX 3 AA3 SER A 35 ILE A 49 1 15 HELIX 4 AA4 PRO A 54 GLN A 74 1 21 HELIX 5 AA5 PHE A 91 ASP A 102 1 12 HELIX 6 AA6 SER A 120 GLY A 136 1 17 HELIX 7 AA7 GLN A 149 LYS A 165 1 17 HELIX 8 AA8 PRO A 168 LEU A 173 1 6 HELIX 9 AA9 PRO A 185 ASN A 192 5 8 HELIX 10 AB1 PRO A 194 GLU A 208 1 15 HELIX 11 AB2 ASP A 233 LYS A 246 1 14 HELIX 12 AB3 HIS A 261 TYR A 266 1 6 HELIX 13 AB4 TYR A 270 GLY A 280 1 11 HELIX 14 AB5 ASP A 292 GLU A 311 1 20 SHEET 1 AA1 4 PHE A 79 LEU A 85 0 SHEET 2 AA1 4 VAL A 5 ALA A 11 1 N LEU A 7 O LYS A 80 SHEET 3 AA1 4 GLU A 106 VAL A 111 1 O ILE A 108 N GLY A 6 SHEET 4 AA1 4 ARG A 139 ALA A 142 1 O ARG A 139 N ALA A 107 SHEET 1 AA2 4 HIS A 214 GLN A 220 0 SHEET 2 AA2 4 THR A 175 HIS A 182 1 N VAL A 179 O GLY A 218 SHEET 3 AA2 4 HIS A 249 THR A 253 1 O ILE A 251 N ILE A 178 SHEET 4 AA2 4 ALA A 282 HIS A 284 1 O HIS A 284 N TYR A 252 LINK O2 GOL A 404 CA CA A 407 1555 1555 2.39 LINK O3 GOL A 404 CA CA A 407 1555 1555 2.46 LINK CA CA A 407 O HOH A 518 1555 1555 2.67 LINK CA CA A 407 O HOH A 558 1555 1555 2.45 LINK CA CA A 407 O HOH A 564 1555 1555 2.49 LINK CA CA A 407 O HOH A 586 1555 1555 2.34 LINK CA CA A 407 O HOH A 625 1555 1555 2.46 LINK CA CA A 407 O HOH A 720 1555 1555 2.55 CISPEP 1 GLU A 89 PRO A 90 0 -1.24 CISPEP 2 GLY A 137 PRO A 138 0 0.22 CISPEP 3 GLY A 231 PRO A 232 0 3.27 CRYST1 37.632 68.069 63.036 90.00 102.22 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026573 0.000000 0.005757 0.00000 SCALE2 0.000000 0.014691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016232 0.00000