HEADER VIRUS 01-SEP-22 8AXX TITLE EXPANDED COXSACKIEVIRUS A9 AFTER TREATMENT WITH ENDOSOMAL IONIC BUFFER COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 MOL_ID: 2; COMPND 5 MOLECULE: CAPSID PROTEIN VP2; COMPND 6 CHAIN: B; COMPND 7 MOL_ID: 3; COMPND 8 MOLECULE: CAPSID PROTEIN VP3; COMPND 9 CHAIN: C SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN COXSACKIEVIRUS A9 (STRAIN GRIGGS); SOURCE 3 ORGANISM_TAXID: 12068; SOURCE 4 STRAIN: GRIGGS; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HUMAN COXSACKIEVIRUS A9 (STRAIN GRIGGS); SOURCE 7 ORGANISM_TAXID: 12068; SOURCE 8 STRAIN: GRIGGS; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: HUMAN COXSACKIEVIRUS A9 (STRAIN GRIGGS); SOURCE 11 ORGANISM_TAXID: 12068; SOURCE 12 STRAIN: GRIGGS KEYWDS ICOSAHEDRAL SYMMETRY, EXPANDED VIRION, PICORNAVIRUS, A-PARTICLE, KEYWDS 2 VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR A.DOMANSKA,Z.PLAVEC,V.RUOKOLAINEN,B.LOFLUND,V.S.MARJOMAKI,S.J.BUTCHER REVDAT 2 01-FEB-23 8AXX 1 JRNL REVDAT 1 19-OCT-22 8AXX 0 JRNL AUTH A.DOMANSKA,Z.PLAVEC,V.RUOKOLAINEN,B.LOFLUND,V.MARJOMAKI, JRNL AUTH 2 S.J.BUTCHER JRNL TITL STRUCTURAL STUDIES REVEAL THAT ENDOSOMAL CATIONS PROMOTE JRNL TITL 2 FORMATION OF INFECTIOUS COXSACKIEVIRUS A9 A-PARTICLES, JRNL TITL 3 FACILITATING RNA AND VP4 RELEASE. JRNL REF J.VIROL. V. 96 36722 2022 JRNL REFN ESSN 1098-5514 JRNL PMID 36448797 JRNL DOI 10.1128/JVI.01367-22 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.F.PETTERSEN,T.D.GODDARD,C.C.HUANG,E.C.MENG,G.S.COUCH, REMARK 1 AUTH 2 T.I.CROLL,J.H.MORRIS,T.E.FERRIN REMARK 1 TITL UCSF CHIMERAX: STRUCTURE VISUALIZATION FOR RESEARCHERS, REMARK 1 TITL 2 EDUCATORS, AND DEVELOPERS REMARK 1 REF PROTEIN SCI. V. 30 70 2021 REMARK 1 REFN ISSN 0961-8368 REMARK 1 PMID 28710774 REMARK 1 DOI 10.1002/PRO.3943 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : XMIPP, EPU, CTFFIND, UCSF CHIMERA, REMARK 3 COOT, RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1D4M REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.300 REMARK 3 NUMBER OF PARTICLES : 8540 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8AXX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125285. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COXSACKIEVIRUS A9 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.10 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.25 REMARK 245 SAMPLE DETAILS : NATIVE PURIFIED CVA9 WAS REMARK 245 TREATED FOR 3H AT 37 C WITH ENDOSOMAL ION COMPOSITION BUFFER REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TALOS ARCTICA REMARK 245 DETECTOR TYPE : FEI FALCON III (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 600.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 3000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 120000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 180-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809017 0.309017 -0.500000 82.88662 REMARK 350 BIOMT2 2 0.309017 0.500000 0.809017 -134.11338 REMARK 350 BIOMT3 2 0.500000 -0.809017 0.309017 217.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 0.809017 -0.309017 -0.500000 217.00000 REMARK 350 BIOMT2 4 0.309017 -0.500000 0.809017 82.88662 REMARK 350 BIOMT3 4 -0.500000 -0.809017 -0.309017 568.11338 REMARK 350 BIOMT1 5 -0.809017 -0.309017 -0.500000 568.11338 REMARK 350 BIOMT2 5 -0.309017 -0.500000 0.809017 217.00000 REMARK 350 BIOMT3 5 -0.500000 0.809017 0.309017 82.88662 REMARK 350 BIOMT1 6 -0.500000 -0.809017 0.309017 434.00000 REMARK 350 BIOMT2 6 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 6 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 7 -0.500000 -0.809017 0.309017 434.00000 REMARK 350 BIOMT3 7 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 8 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 8 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 8 -0.500000 -0.809017 0.309017 434.00000 REMARK 350 BIOMT1 9 0.809017 0.309017 0.500000 -134.11338 REMARK 350 BIOMT2 9 -0.309017 -0.500000 0.809017 217.00000 REMARK 350 BIOMT3 9 0.500000 -0.809017 -0.309017 351.11338 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 434.00000 REMARK 350 BIOMT2 10 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 10 -1.000000 0.000000 0.000000 434.00000 REMARK 350 BIOMT1 11 -0.809017 0.309017 0.500000 217.00000 REMARK 350 BIOMT2 11 0.309017 -0.500000 0.809017 82.88662 REMARK 350 BIOMT3 11 0.500000 0.809017 0.309017 -134.11338 REMARK 350 BIOMT1 12 0.309017 0.500000 -0.809017 217.00000 REMARK 350 BIOMT2 12 0.500000 -0.809017 -0.309017 351.11338 REMARK 350 BIOMT3 12 -0.809017 -0.309017 -0.500000 568.11338 REMARK 350 BIOMT1 13 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 13 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 13 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 14 0.309017 -0.500000 0.809017 82.88662 REMARK 350 BIOMT2 14 -0.500000 -0.809017 -0.309017 568.11338 REMARK 350 BIOMT3 14 0.809017 -0.309017 -0.500000 217.00000 REMARK 350 BIOMT1 15 -0.309017 -0.500000 0.809017 217.00000 REMARK 350 BIOMT2 15 -0.500000 0.809017 0.309017 82.88662 REMARK 350 BIOMT3 15 -0.809017 -0.309017 -0.500000 568.11338 REMARK 350 BIOMT1 16 0.500000 -0.809017 0.309017 217.00000 REMARK 350 BIOMT2 16 -0.809017 -0.309017 0.500000 351.11338 REMARK 350 BIOMT3 16 -0.309017 -0.500000 -0.809017 568.11338 REMARK 350 BIOMT1 17 -0.809017 -0.309017 0.500000 351.11338 REMARK 350 BIOMT2 17 0.309017 0.500000 0.809017 -134.11338 REMARK 350 BIOMT3 17 -0.500000 0.809017 -0.309017 217.00000 REMARK 350 BIOMT1 18 0.309017 0.500000 0.809017 -134.11338 REMARK 350 BIOMT2 18 0.500000 -0.809017 0.309017 217.00000 REMARK 350 BIOMT3 18 0.809017 0.309017 -0.500000 82.88662 REMARK 350 BIOMT1 19 0.500000 0.809017 0.309017 -134.11338 REMARK 350 BIOMT2 19 0.809017 -0.309017 -0.500000 217.00000 REMARK 350 BIOMT3 19 -0.309017 0.500000 -0.809017 351.11338 REMARK 350 BIOMT1 20 0.500000 -0.809017 -0.309017 351.11338 REMARK 350 BIOMT2 20 -0.809017 -0.309017 -0.500000 568.11338 REMARK 350 BIOMT3 20 0.309017 0.500000 -0.809017 217.00000 REMARK 350 BIOMT1 21 -1.000000 0.000000 0.000000 434.00000 REMARK 350 BIOMT2 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 0.000000 -1.000000 434.00000 REMARK 350 BIOMT1 22 -0.500000 -0.809017 -0.309017 568.11338 REMARK 350 BIOMT2 22 -0.809017 0.309017 0.500000 217.00000 REMARK 350 BIOMT3 22 -0.309017 0.500000 -0.809017 351.11338 REMARK 350 BIOMT1 23 0.000000 0.000000 -1.000000 434.00000 REMARK 350 BIOMT2 23 -1.000000 0.000000 0.000000 434.00000 REMARK 350 BIOMT3 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 24 -0.500000 0.809017 0.309017 82.88662 REMARK 350 BIOMT2 24 0.809017 0.309017 0.500000 -134.11338 REMARK 350 BIOMT3 24 0.309017 0.500000 -0.809017 217.00000 REMARK 350 BIOMT1 25 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 25 0.000000 -1.000000 0.000000 434.00000 REMARK 350 BIOMT3 25 0.000000 0.000000 -1.000000 434.00000 REMARK 350 BIOMT1 26 0.309017 0.500000 -0.809017 217.00000 REMARK 350 BIOMT2 26 -0.500000 0.809017 0.309017 82.88662 REMARK 350 BIOMT3 26 0.809017 0.309017 0.500000 -134.11338 REMARK 350 BIOMT1 27 0.000000 0.000000 -1.000000 434.00000 REMARK 350 BIOMT2 27 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 27 0.000000 -1.000000 0.000000 434.00000 REMARK 350 BIOMT1 28 -0.309017 0.500000 -0.809017 351.11338 REMARK 350 BIOMT2 28 -0.500000 -0.809017 -0.309017 568.11338 REMARK 350 BIOMT3 28 -0.809017 0.309017 0.500000 217.00000 REMARK 350 BIOMT1 29 -0.809017 0.309017 -0.500000 434.00000 REMARK 350 BIOMT2 29 0.309017 -0.500000 -0.809017 434.00000 REMARK 350 BIOMT3 29 -0.500000 -0.809017 0.309017 434.00000 REMARK 350 BIOMT1 30 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 30 -0.809017 0.309017 -0.500000 434.00000 REMARK 350 BIOMT3 30 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT1 31 0.309017 -0.500000 -0.809017 434.00000 REMARK 350 BIOMT2 31 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 31 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT1 32 -0.309017 -0.500000 -0.809017 568.11338 REMARK 350 BIOMT2 32 -0.500000 0.809017 -0.309017 217.00000 REMARK 350 BIOMT3 32 0.809017 0.309017 -0.500000 82.88662 REMARK 350 BIOMT1 33 -0.500000 0.809017 -0.309017 217.00000 REMARK 350 BIOMT2 33 0.809017 0.309017 -0.500000 82.88662 REMARK 350 BIOMT3 33 -0.309017 -0.500000 -0.809017 568.11338 REMARK 350 BIOMT1 34 -0.309017 0.500000 -0.809017 351.11338 REMARK 350 BIOMT2 34 0.500000 0.809017 0.309017 -134.11338 REMARK 350 BIOMT3 34 0.809017 -0.309017 -0.500000 217.00000 REMARK 350 BIOMT1 35 0.809017 0.309017 -0.500000 82.88662 REMARK 350 BIOMT2 35 -0.309017 -0.500000 -0.809017 568.11338 REMARK 350 BIOMT3 35 -0.500000 0.809017 -0.309017 217.00000 REMARK 350 BIOMT1 36 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 36 0.000000 0.000000 -1.000000 434.00000 REMARK 350 BIOMT3 36 -1.000000 0.000000 0.000000 434.00000 REMARK 350 BIOMT1 37 0.809017 -0.309017 -0.500000 217.00000 REMARK 350 BIOMT2 37 -0.309017 0.500000 -0.809017 351.11338 REMARK 350 BIOMT3 37 0.500000 0.809017 0.309017 -134.11338 REMARK 350 BIOMT1 38 -0.809017 -0.309017 -0.500000 568.11338 REMARK 350 BIOMT2 38 0.309017 0.500000 -0.809017 217.00000 REMARK 350 BIOMT3 38 0.500000 -0.809017 -0.309017 351.11338 REMARK 350 BIOMT1 39 -0.500000 -0.809017 0.309017 434.00000 REMARK 350 BIOMT2 39 -0.809017 0.309017 -0.500000 434.00000 REMARK 350 BIOMT3 39 0.309017 -0.500000 -0.809017 434.00000 REMARK 350 BIOMT1 40 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT2 40 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT3 40 -0.809017 0.309017 -0.500000 434.00000 REMARK 350 BIOMT1 41 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT2 41 0.309017 -0.500000 -0.809017 434.00000 REMARK 350 BIOMT3 41 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 42 0.809017 0.309017 0.500000 -134.11338 REMARK 350 BIOMT2 42 0.309017 0.500000 -0.809017 217.00000 REMARK 350 BIOMT3 42 -0.500000 0.809017 0.309017 82.88662 REMARK 350 BIOMT1 43 0.000000 -1.000000 0.000000 434.00000 REMARK 350 BIOMT2 43 0.000000 0.000000 -1.000000 434.00000 REMARK 350 BIOMT3 43 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 44 -0.809017 0.309017 0.500000 217.00000 REMARK 350 BIOMT2 44 -0.309017 0.500000 -0.809017 351.11338 REMARK 350 BIOMT3 44 -0.500000 -0.809017 -0.309017 568.11338 REMARK 350 BIOMT1 45 -0.809017 0.309017 -0.500000 434.00000 REMARK 350 BIOMT2 45 -0.309017 0.500000 0.809017 0.00000 REMARK 350 BIOMT3 45 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT1 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 46 -1.000000 0.000000 0.000000 434.00000 REMARK 350 BIOMT3 46 0.000000 -1.000000 0.000000 434.00000 REMARK 350 BIOMT1 47 0.309017 -0.500000 0.809017 82.88662 REMARK 350 BIOMT2 47 0.500000 0.809017 0.309017 -134.11338 REMARK 350 BIOMT3 47 -0.809017 0.309017 0.500000 217.00000 REMARK 350 BIOMT1 48 -0.309017 -0.500000 0.809017 217.00000 REMARK 350 BIOMT2 48 0.500000 -0.809017 -0.309017 351.11338 REMARK 350 BIOMT3 48 0.809017 0.309017 0.500000 -134.11338 REMARK 350 BIOMT1 49 0.500000 -0.809017 0.309017 217.00000 REMARK 350 BIOMT2 49 0.809017 0.309017 -0.500000 82.88662 REMARK 350 BIOMT3 49 0.309017 0.500000 0.809017 -134.11338 REMARK 350 BIOMT1 50 -0.809017 -0.309017 0.500000 351.11338 REMARK 350 BIOMT2 50 -0.309017 -0.500000 -0.809017 568.11338 REMARK 350 BIOMT3 50 0.500000 -0.809017 0.309017 217.00000 REMARK 350 BIOMT1 51 0.309017 0.500000 0.809017 -134.11338 REMARK 350 BIOMT2 51 -0.500000 0.809017 -0.309017 217.00000 REMARK 350 BIOMT3 51 -0.809017 -0.309017 0.500000 351.11338 REMARK 350 BIOMT1 52 0.500000 0.809017 0.309017 -134.11338 REMARK 350 BIOMT2 52 -0.809017 0.309017 0.500000 217.00000 REMARK 350 BIOMT3 52 0.309017 -0.500000 0.809017 82.88662 REMARK 350 BIOMT1 53 0.500000 -0.809017 -0.309017 351.11338 REMARK 350 BIOMT2 53 0.809017 0.309017 0.500000 -134.11338 REMARK 350 BIOMT3 53 -0.309017 -0.500000 0.809017 217.00000 REMARK 350 BIOMT1 54 -1.000000 0.000000 0.000000 434.00000 REMARK 350 BIOMT2 54 0.000000 -1.000000 0.000000 434.00000 REMARK 350 BIOMT3 54 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 55 -0.500000 -0.809017 -0.309017 568.11338 REMARK 350 BIOMT2 55 0.809017 -0.309017 -0.500000 217.00000 REMARK 350 BIOMT3 55 0.309017 -0.500000 0.809017 82.88662 REMARK 350 BIOMT1 56 0.500000 0.809017 -0.309017 0.00000 REMARK 350 BIOMT2 56 0.809017 -0.309017 0.500000 0.00000 REMARK 350 BIOMT3 56 0.309017 -0.500000 -0.809017 434.00000 REMARK 350 BIOMT1 57 -0.500000 0.809017 0.309017 82.88662 REMARK 350 BIOMT2 57 -0.809017 -0.309017 -0.500000 568.11338 REMARK 350 BIOMT3 57 -0.309017 -0.500000 0.809017 217.00000 REMARK 350 BIOMT1 58 0.309017 -0.500000 -0.809017 434.00000 REMARK 350 BIOMT2 58 -0.500000 -0.809017 0.309017 434.00000 REMARK 350 BIOMT3 58 -0.809017 0.309017 -0.500000 434.00000 REMARK 350 BIOMT1 59 -0.309017 -0.500000 -0.809017 568.11338 REMARK 350 BIOMT2 59 0.500000 -0.809017 0.309017 217.00000 REMARK 350 BIOMT3 59 -0.809017 -0.309017 0.500000 351.11338 REMARK 350 BIOMT1 60 -0.500000 0.809017 -0.309017 217.00000 REMARK 350 BIOMT2 60 -0.809017 -0.309017 0.500000 351.11338 REMARK 350 BIOMT3 60 0.309017 0.500000 0.809017 -134.11338 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ASP A 2 REMARK 465 VAL A 3 REMARK 465 GLU A 4 REMARK 465 GLU A 5 REMARK 465 ALA A 6 REMARK 465 ILE A 7 REMARK 465 GLU A 8 REMARK 465 ARG A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 VAL A 12 REMARK 465 HIS A 13 REMARK 465 VAL A 14 REMARK 465 ALA A 15 REMARK 465 ASP A 16 REMARK 465 THR A 17 REMARK 465 MET A 18 REMARK 465 ARG A 19 REMARK 465 SER A 20 REMARK 465 GLY A 21 REMARK 465 PRO A 22 REMARK 465 SER A 23 REMARK 465 ASN A 24 REMARK 465 SER A 25 REMARK 465 ALA A 26 REMARK 465 SER A 27 REMARK 465 VAL A 28 REMARK 465 PRO A 29 REMARK 465 ALA A 30 REMARK 465 LEU A 31 REMARK 465 THR A 32 REMARK 465 ALA A 33 REMARK 465 VAL A 34 REMARK 465 GLU A 35 REMARK 465 THR A 36 REMARK 465 GLY A 37 REMARK 465 HIS A 38 REMARK 465 THR A 39 REMARK 465 SER A 40 REMARK 465 GLN A 41 REMARK 465 VAL A 42 REMARK 465 THR A 43 REMARK 465 PRO A 44 REMARK 465 SER A 45 REMARK 465 ASP A 46 REMARK 465 THR A 47 REMARK 465 MET A 48 REMARK 465 GLN A 49 REMARK 465 THR A 50 REMARK 465 ARG A 51 REMARK 465 HIS A 52 REMARK 465 VAL A 53 REMARK 465 LYS A 54 REMARK 465 ASN A 55 REMARK 465 TYR A 56 REMARK 465 HIS A 57 REMARK 465 SER A 58 REMARK 465 ARG A 59 REMARK 465 ASP A 128 REMARK 465 PRO A 129 REMARK 465 GLY A 130 REMARK 465 THR A 131 REMARK 465 THR A 132 REMARK 465 LEU A 133 REMARK 465 ALA A 134 REMARK 465 GLN A 135 REMARK 465 ASP A 136 REMARK 465 MET A 137 REMARK 465 GLN A 204 REMARK 465 ARG A 205 REMARK 465 VAL A 284 REMARK 465 ALA A 285 REMARK 465 GLN A 286 REMARK 465 SER A 287 REMARK 465 ARG A 288 REMARK 465 ARG A 289 REMARK 465 ARG A 290 REMARK 465 GLY A 291 REMARK 465 ASP A 292 REMARK 465 MET A 293 REMARK 465 SER A 294 REMARK 465 THR A 295 REMARK 465 LEU A 296 REMARK 465 ASN A 297 REMARK 465 THR A 298 REMARK 465 HIS A 299 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 THR B 3 REMARK 465 VAL B 4 REMARK 465 GLU B 5 REMARK 465 GLU B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 ARG B 12 REMARK 465 VAL B 13 REMARK 465 CYS B 28 REMARK 465 ASP B 44 REMARK 465 ASP B 45 REMARK 465 GLU B 46 REMARK 465 ALA B 47 REMARK 465 THR B 48 REMARK 465 ALA B 49 REMARK 465 ALA B 260 REMARK 465 GLN B 261 REMARK 465 GLY C 1 REMARK 465 LEU C 2 REMARK 465 TYR C 176 REMARK 465 ARG C 177 REMARK 465 LEU C 178 REMARK 465 VAL C 179 REMARK 465 GLN C 180 REMARK 465 GLN C 181 REMARK 465 ASP C 182 REMARK 465 GLU C 183 REMARK 465 TYR C 184 REMARK 465 ASP C 234 REMARK 465 ASN C 235 REMARK 465 LYS C 236 REMARK 465 LEU C 237 REMARK 465 GLN C 238 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 201 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 SER A 207 C TYR A 208 N 0.186 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 74 -18.89 -142.87 REMARK 500 TRP A 93 101.40 -163.53 REMARK 500 PRO A 184 -177.26 -66.33 REMARK 500 SER A 187 146.51 170.05 REMARK 500 PHE A 202 102.70 147.19 REMARK 500 SER A 207 -26.82 -155.97 REMARK 500 VAL A 221 -94.32 -91.25 REMARK 500 ARG A 222 121.40 78.05 REMARK 500 VAL A 249 99.76 71.25 REMARK 500 PHE A 262 13.14 -154.02 REMARK 500 PRO A 268 136.90 -38.92 REMARK 500 ARG A 275 -101.99 -95.65 REMARK 500 LYS A 276 -50.02 -174.50 REMARK 500 VAL A 281 13.54 -141.87 REMARK 500 SER B 15 121.58 172.60 REMARK 500 ASN B 20 -6.45 -158.19 REMARK 500 SER B 21 -6.47 131.04 REMARK 500 THR B 54 171.65 57.98 REMARK 500 GLN B 55 132.67 171.95 REMARK 500 ARG B 62 147.71 166.30 REMARK 500 SER B 75 140.33 -36.31 REMARK 500 PRO B 83 40.35 -103.49 REMARK 500 LEU B 91 -55.99 80.28 REMARK 500 TYR B 98 -76.99 -102.64 REMARK 500 ALA B 104 144.41 167.32 REMARK 500 VAL B 136 103.31 79.93 REMARK 500 MET B 146 -10.31 -163.58 REMARK 500 ASN B 148 119.28 -180.00 REMARK 500 SER B 161 64.30 -157.73 REMARK 500 THR B 164 60.30 -111.87 REMARK 500 MET B 175 -5.10 -150.78 REMARK 500 THR B 194 -66.15 -136.65 REMARK 500 ASN B 195 -168.48 -125.72 REMARK 500 ASN B 196 17.71 -166.04 REMARK 500 VAL B 227 104.07 68.34 REMARK 500 TYR B 231 13.64 -158.54 REMARK 500 ALA B 232 -145.67 62.03 REMARK 500 THR C 11 61.57 83.87 REMARK 500 SER C 16 12.10 165.22 REMARK 500 GLN C 27 44.86 72.43 REMARK 500 ASN C 56 54.31 -92.50 REMARK 500 ASN C 57 33.44 -87.14 REMARK 500 ASP C 60 47.39 78.39 REMARK 500 MET C 65 0.85 102.62 REMARK 500 GLN C 88 86.03 -165.26 REMARK 500 TRP C 170 60.18 62.37 REMARK 500 CYS C 217 -92.18 -89.34 REMARK 500 ASN C 218 4.42 -170.73 REMARK 500 MET C 224 96.70 72.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-15634 RELATED DB: EMDB REMARK 900 NATIVE CVA9 REMARK 900 RELATED ID: EMD-15692 RELATED DB: EMDB REMARK 900 FAF-BSA TREATED CVA9 REMARK 900 RELATED ID: EMD-15706 RELATED DB: EMDB REMARK 900 EXPANDED COXSACKIEVIRUS A9 AFTER TREATMENT WITH ENDOSOMAL IONIC REMARK 900 BUFFER DBREF 8AXX A 1 299 UNP P21404 POLG_CXA9 569 867 DBREF 8AXX B 1 261 UNP P21404 POLG_CXA9 70 330 DBREF 8AXX C 1 238 UNP P21404 POLG_CXA9 331 568 SEQADV 8AXX VAL A 11 UNP P21404 ARG 579 VARIANT SEQADV 8AXX VAL A 12 UNP P21404 CYS 580 VARIANT SEQADV 8AXX HIS A 13 UNP P21404 THR 581 VARIANT SEQADV 8AXX SER A 20 UNP P21404 THR 588 VARIANT SEQADV 8AXX ASN A 84 UNP P21404 LYS 652 VARIANT SEQADV 8AXX ASP A 85 UNP P21404 HIS 653 VARIANT SEQADV 8AXX HIS A 142 UNP P21404 ARG 710 VARIANT SEQADV 8AXX VAL B 110 UNP P21404 LEU 179 VARIANT SEQRES 1 A 299 GLY ASP VAL GLU GLU ALA ILE GLU ARG ALA VAL VAL HIS SEQRES 2 A 299 VAL ALA ASP THR MET ARG SER GLY PRO SER ASN SER ALA SEQRES 3 A 299 SER VAL PRO ALA LEU THR ALA VAL GLU THR GLY HIS THR SEQRES 4 A 299 SER GLN VAL THR PRO SER ASP THR MET GLN THR ARG HIS SEQRES 5 A 299 VAL LYS ASN TYR HIS SER ARG SER GLU SER THR VAL GLU SEQRES 6 A 299 ASN PHE LEU GLY ARG SER ALA CYS VAL TYR MET GLU GLU SEQRES 7 A 299 TYR LYS THR THR ASP ASN ASP VAL ASN LYS LYS PHE VAL SEQRES 8 A 299 ALA TRP PRO ILE ASN THR LYS GLN MET VAL GLN MET ARG SEQRES 9 A 299 ARG LYS LEU GLU MET PHE THR TYR LEU ARG PHE ASP MET SEQRES 10 A 299 GLU VAL THR PHE VAL ILE THR SER ARG GLN ASP PRO GLY SEQRES 11 A 299 THR THR LEU ALA GLN ASP MET PRO VAL LEU THR HIS GLN SEQRES 12 A 299 ILE MET TYR VAL PRO PRO GLY GLY PRO ILE PRO ALA LYS SEQRES 13 A 299 VAL ASP ASP TYR ALA TRP GLN THR SER THR ASN PRO SER SEQRES 14 A 299 ILE PHE TRP THR GLU GLY ASN ALA PRO ALA ARG MET SER SEQRES 15 A 299 ILE PRO PHE ILE SER ILE GLY ASN ALA TYR SER ASN PHE SEQRES 16 A 299 TYR ASP GLY TRP SER ASN PHE ASP GLN ARG GLY SER TYR SEQRES 17 A 299 GLY TYR ASN THR LEU ASN ASN LEU GLY HIS ILE TYR VAL SEQRES 18 A 299 ARG HIS VAL SER GLY SER SER PRO HIS PRO ILE THR SER SEQRES 19 A 299 THR ILE ARG VAL TYR PHE LYS PRO LYS HIS THR ARG ALA SEQRES 20 A 299 TRP VAL PRO ARG PRO PRO ARG LEU CYS GLN TYR LYS LYS SEQRES 21 A 299 ALA PHE SER VAL ASP PHE THR PRO THR PRO ILE THR ASP SEQRES 22 A 299 THR ARG LYS ASP ILE ASN THR VAL THR THR VAL ALA GLN SEQRES 23 A 299 SER ARG ARG ARG GLY ASP MET SER THR LEU ASN THR HIS SEQRES 1 B 261 SER PRO THR VAL GLU GLU CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 261 ARG SER ILE THR LEU GLY ASN SER THR ILE THR THR GLN SEQRES 3 B 261 GLU CYS ALA ASN VAL VAL VAL GLY TYR GLY ARG TRP PRO SEQRES 4 B 261 THR TYR LEU ARG ASP ASP GLU ALA THR ALA GLU ASP GLN SEQRES 5 B 261 PRO THR GLN PRO ASP VAL ALA THR CYS ARG PHE TYR THR SEQRES 6 B 261 LEU ASP SER ILE LYS TRP GLU LYS GLY SER VAL GLY TRP SEQRES 7 B 261 TRP TRP LYS PHE PRO GLU ALA LEU SER ASP MET GLY LEU SEQRES 8 B 261 PHE GLY GLN ASN MET GLN TYR HIS TYR LEU GLY ARG ALA SEQRES 9 B 261 GLY TYR THR ILE HIS VAL GLN CYS ASN ALA SER LYS PHE SEQRES 10 B 261 HIS GLN GLY CYS LEU LEU VAL VAL CYS VAL PRO GLU ALA SEQRES 11 B 261 GLU MET GLY GLY ALA VAL VAL GLY GLN ALA PHE SER ALA SEQRES 12 B 261 THR ALA MET ALA ASN GLY ASP LYS ALA TYR GLU PHE THR SEQRES 13 B 261 SER ALA THR GLN SER ASP GLN THR LYS VAL GLN THR ALA SEQRES 14 B 261 ILE HIS ASN ALA GLY MET GLY VAL GLY VAL GLY ASN LEU SEQRES 15 B 261 THR ILE TYR PRO HIS GLN TRP ILE ASN LEU ARG THR ASN SEQRES 16 B 261 ASN SER ALA THR ILE VAL MET PRO TYR ILE ASN SER VAL SEQRES 17 B 261 PRO MET ASP ASN MET PHE ARG HIS TYR ASN PHE THR LEU SEQRES 18 B 261 MET VAL ILE PRO PHE VAL LYS LEU ASP TYR ALA ASP THR SEQRES 19 B 261 ALA SER THR TYR VAL PRO ILE THR VAL THR VAL ALA PRO SEQRES 20 B 261 MET CYS ALA GLU TYR ASN GLY LEU ARG LEU ALA GLN ALA SEQRES 21 B 261 GLN SEQRES 1 C 238 GLY LEU PRO THR MET ASN THR PRO GLY SER THR GLN PHE SEQRES 2 C 238 LEU THR SER ASP ASP PHE GLN SER PRO CYS ALA LEU PRO SEQRES 3 C 238 GLN PHE ASP VAL THR PRO SER MET ASN ILE PRO GLY GLU SEQRES 4 C 238 VAL LYS ASN LEU MET GLU ILE ALA GLU VAL ASP SER VAL SEQRES 5 C 238 VAL PRO VAL ASN ASN VAL GLN ASP THR THR ASP GLN MET SEQRES 6 C 238 GLU MET PHE ARG ILE PRO VAL THR ILE ASN ALA PRO LEU SEQRES 7 C 238 GLN GLN GLN VAL PHE GLY LEU ARG LEU GLN PRO GLY LEU SEQRES 8 C 238 ASP SER VAL PHE LYS HIS THR LEU LEU GLY GLU ILE LEU SEQRES 9 C 238 ASN TYR TYR ALA HIS TRP SER GLY SER MET LYS LEU THR SEQRES 10 C 238 PHE VAL PHE CYS GLY SER ALA MET ALA THR GLY LYS PHE SEQRES 11 C 238 LEU ILE ALA TYR SER PRO PRO GLY ALA ASN PRO PRO LYS SEQRES 12 C 238 THR ARG LYS ASP ALA MET LEU GLY THR HIS ILE ILE TRP SEQRES 13 C 238 ASP ILE GLY LEU GLN SER SER CYS VAL LEU CYS VAL PRO SEQRES 14 C 238 TRP ILE SER GLN THR HIS TYR ARG LEU VAL GLN GLN ASP SEQRES 15 C 238 GLU TYR THR SER ALA GLY TYR VAL THR CYS TRP TYR GLN SEQRES 16 C 238 THR GLY MET ILE VAL PRO PRO GLY THR PRO ASN SER SER SEQRES 17 C 238 SER ILE MET CYS PHE ALA SER ALA CYS ASN ASP PHE SER SEQRES 18 C 238 VAL ARG MET LEU ARG ASP THR PRO PHE ILE SER GLN ASP SEQRES 19 C 238 ASN LYS LEU GLN HELIX 1 AA1 THR A 63 LEU A 68 1 6 HELIX 2 AA2 MET A 100 ARG A 105 1 6 HELIX 3 AA3 ASP A 159 GLN A 163 5 5 HELIX 4 AA4 GLN B 94 HIS B 99 1 6 HELIX 5 AA5 ASN B 181 TYR B 185 5 5 HELIX 6 AA6 ASP C 92 LYS C 96 5 5 SHEET 1 AA1 4 ALA A 72 LYS A 80 0 SHEET 2 AA1 4 THR A 233 PRO A 250 -1 O ILE A 236 N GLU A 77 SHEET 3 AA1 4 PHE A 110 ARG A 126 -1 N ASP A 116 O LYS A 243 SHEET 4 AA1 4 TYR A 192 SER A 193 -1 O TYR A 192 N LEU A 113 SHEET 1 AA2 4 ARG A 180 ILE A 183 0 SHEET 2 AA2 4 PHE A 110 ARG A 126 -1 N MET A 117 O ILE A 183 SHEET 3 AA2 4 THR A 233 PRO A 250 -1 O LYS A 243 N ASP A 116 SHEET 4 AA2 4 GLU C 39 VAL C 40 -1 O VAL C 40 N ALA A 247 SHEET 1 AA3 3 SER A 169 THR A 173 0 SHEET 2 AA3 3 THR A 141 VAL A 147 -1 N HIS A 142 O TRP A 172 SHEET 3 AA3 3 HIS A 218 TYR A 220 -1 O TYR A 220 N MET A 145 SHEET 1 AA4 3 SER A 169 THR A 173 0 SHEET 2 AA4 3 THR A 141 VAL A 147 -1 N HIS A 142 O TRP A 172 SHEET 3 AA4 3 HIS A 223 VAL A 224 -1 O VAL A 224 N THR A 141 SHEET 1 AA5 5 VAL B 32 VAL B 33 0 SHEET 2 AA5 5 SER B 197 MET B 202 1 O VAL B 201 N VAL B 32 SHEET 3 AA5 5 GLY B 102 CYS B 112 -1 N ILE B 108 O ILE B 200 SHEET 4 AA5 5 VAL B 239 TYR B 252 -1 O THR B 244 N HIS B 109 SHEET 5 AA5 5 TYR B 64 THR B 65 -1 N TYR B 64 O VAL B 245 SHEET 1 AA6 3 GLN B 55 PRO B 56 0 SHEET 2 AA6 3 VAL B 239 TYR B 252 -1 O TYR B 252 N GLN B 55 SHEET 3 AA6 3 ILE B 69 TRP B 71 -1 N TRP B 71 O VAL B 239 SHEET 1 AA7 5 TYR B 153 GLU B 154 0 SHEET 2 AA7 5 TRP B 78 PHE B 82 -1 N TRP B 79 O TYR B 153 SHEET 3 AA7 5 PHE B 219 ILE B 224 -1 O LEU B 221 N TRP B 80 SHEET 4 AA7 5 CYS B 121 PRO B 128 -1 N VAL B 127 O THR B 220 SHEET 5 AA7 5 HIS B 187 ASN B 191 -1 O GLN B 188 N VAL B 124 SHEET 1 AA8 4 SER C 51 VAL C 52 0 SHEET 2 AA8 4 SER C 207 ALA C 216 -1 O ALA C 214 N SER C 51 SHEET 3 AA8 4 TYR C 107 PHE C 120 -1 N VAL C 119 O MET C 211 SHEET 4 AA8 4 SER C 163 SER C 172 -1 O LEU C 166 N LEU C 116 SHEET 1 AA9 4 ILE C 70 THR C 73 0 SHEET 2 AA9 4 SER C 207 ALA C 216 -1 O SER C 208 N VAL C 72 SHEET 3 AA9 4 TYR C 107 PHE C 120 -1 N VAL C 119 O MET C 211 SHEET 4 AA9 4 SER C 221 LEU C 225 -1 O ARG C 223 N HIS C 109 SHEET 1 AB1 4 GLN C 81 LEU C 87 0 SHEET 2 AB1 4 GLY C 188 ILE C 199 -1 O CYS C 192 N VAL C 82 SHEET 3 AB1 4 THR C 127 SER C 135 -1 N THR C 127 O ILE C 199 SHEET 4 AB1 4 THR C 152 ASP C 157 -1 O TRP C 156 N PHE C 130 CISPEP 1 PHE B 82 PRO B 83 0 11.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000