HEADER TRANSFERASE 25-SEP-22 8B63 TITLE CRYSTAL STRUCTURE OF P. AERUGINOSA WAAG IN COMPLEX WITH UDP-GALNAC COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-GLUCOSE:(HEPTOSYL) LPS ALPHA 1,3-GLUCOSYLTRANSFERASE COMPND 3 WAAG; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 287; SOURCE 4 GENE: WAAG; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GLYCOSYLTRANSFERASE, WAAG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR E.SCALETTI,R.GUSTAFSSON WESTERGREN,P.STENMARK REVDAT 2 17-APR-24 8B63 1 JRNL REVDAT 1 04-OCT-23 8B63 0 JRNL AUTH E.R.SCALETTI,P.PETTERSSON,J.PATRICK,P.J.SHILLING, JRNL AUTH 2 R.G.WESTERGREN,D.O.DALEY,L.MALER,G.WIDMALM,P.STENMARK JRNL TITL STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THE PSEUDOMONAS JRNL TITL 2 AERUGINOSA GLYCOSYLTRANSFERASE WAAG AND THE IMPLICATIONS FOR JRNL TITL 3 LIPOPOLYSACCHARIDE BIOSYNTHESIS. JRNL REF J.BIOL.CHEM. V. 299 05256 2023 JRNL REFN ESSN 1083-351X JRNL PMID 37716703 JRNL DOI 10.1016/J.JBC.2023.105256 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.04 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 40977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.221 REMARK 3 R VALUE (WORKING SET) : 0.219 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2152 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2956 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 146 REMARK 3 BIN FREE R VALUE : 0.3370 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5781 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 94 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.53000 REMARK 3 B22 (A**2) : 1.18000 REMARK 3 B33 (A**2) : 0.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.67000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.290 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.221 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.205 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.317 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.929 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.913 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6025 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 5494 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8185 ; 1.537 ; 1.650 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12750 ; 0.521 ; 1.560 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 735 ; 6.866 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 68 ; 9.561 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 971 ;17.001 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 892 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7026 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1274 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2938 ; 3.289 ; 3.824 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2937 ; 3.289 ; 3.823 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3673 ; 4.616 ; 5.721 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3674 ; 4.615 ; 5.721 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3087 ; 3.945 ; 4.224 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3080 ; 3.944 ; 4.226 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4513 ; 5.835 ; 6.185 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6540 ; 7.714 ;48.162 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6535 ; 7.714 ;48.163 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8B63 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-SEP-22. REMARK 100 THE DEPOSITION ID IS D_1292125830. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-JUL-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43178 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 55.042 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2IV7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MIB PH 4.0, 25% W/V PEG 1500, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 54.98150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 110 REMARK 465 ARG A 111 REMARK 465 ASN A 112 REMARK 465 PRO A 113 REMARK 465 LEU A 114 REMARK 465 TYR A 115 REMARK 465 MET B 0 REMARK 465 LEU B 110 REMARK 465 ARG B 111 REMARK 465 ASN B 112 REMARK 465 PRO B 113 REMARK 465 LEU B 114 REMARK 465 TYR B 115 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 58 OG REMARK 470 ARG A 116 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 117 CG CD OE1 NE2 REMARK 470 LYS A 223 CG CD CE NZ REMARK 470 ARG B 116 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 117 CG CD OE1 NE2 REMARK 470 LYS B 223 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 79 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 83 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 263 45.22 -93.29 REMARK 500 HIS A 276 64.64 -152.78 REMARK 500 GLU A 281 113.22 -174.14 REMARK 500 THR A 283 -77.44 -133.26 REMARK 500 ASP B 263 40.09 -105.32 REMARK 500 THR B 283 -77.34 -136.54 REMARK 500 HIS B 354 -65.23 -94.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 29 0.08 SIDE CHAIN REMARK 500 ARG A 57 0.16 SIDE CHAIN REMARK 500 ARG A 63 0.11 SIDE CHAIN REMARK 500 ARG A 79 0.09 SIDE CHAIN REMARK 500 ARG A 83 0.10 SIDE CHAIN REMARK 500 ARG A 120 0.10 SIDE CHAIN REMARK 500 ARG A 316 0.12 SIDE CHAIN REMARK 500 ARG B 57 0.10 SIDE CHAIN REMARK 500 ARG B 161 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8B63 A 2 370 UNP Q9HUF6 Q9HUF6_PSEAE 2 370 DBREF 8B63 B 2 370 UNP Q9HUF6 Q9HUF6_PSEAE 2 370 SEQADV 8B63 MET A 0 UNP Q9HUF6 INITIATING METHIONINE SEQADV 8B63 ALA A 1 UNP Q9HUF6 EXPRESSION TAG SEQADV 8B63 MET B 0 UNP Q9HUF6 INITIATING METHIONINE SEQADV 8B63 ALA B 1 UNP Q9HUF6 EXPRESSION TAG SEQRES 1 A 371 MET ALA THR LEU ALA PHE ILE LEU TYR LYS TYR PHE PRO SEQRES 2 A 371 PHE GLY GLY LEU GLN ARG ASP PHE MET ARG ILE ALA LEU SEQRES 3 A 371 GLU CYS GLN ARG ARG GLY HIS ASP ILE ARG VAL TYR THR SEQRES 4 A 371 LEU ILE TRP GLU GLY ASP VAL PRO ASP GLY PHE GLU VAL SEQRES 5 A 371 LEU VAL ALA PRO VAL ARG SER ILE PHE ASN HIS ARG ARG SEQRES 6 A 371 ASN GLU LYS PHE THR ALA TRP VAL ARG ALA ASP LEU ASP SEQRES 7 A 371 ARG ARG PRO VAL GLN ARG VAL ILE GLY PHE ASN LYS MET SEQRES 8 A 371 PRO GLY LEU ASP VAL TYR TYR ALA ALA ASP ALA CYS PHE SEQRES 9 A 371 GLU GLU LYS ALA GLN THR LEU ARG ASN PRO LEU TYR ARG SEQRES 10 A 371 GLN TRP GLY ARG TYR ARG HIS PHE ALA GLY TYR GLU ARG SEQRES 11 A 371 ALA VAL PHE ASP PRO ALA SER LYS THR GLU ILE LEU MET SEQRES 12 A 371 ILE SER GLU VAL GLN GLN PRO LEU PHE VAL LYS HIS TYR SEQRES 13 A 371 GLY THR GLN ALA GLU ARG PHE HIS LEU LEU PRO PRO GLY SEQRES 14 A 371 ILE SER GLN ASP ARG ARG ALA PRO ALA ASN ALA ALA ASP SEQRES 15 A 371 VAL ARG ALA GLU PHE ARG ARG GLU PHE GLY LEU GLU GLU SEQRES 16 A 371 ASP ASP LEU LEU LEU VAL GLN ILE GLY SER GLY PHE LYS SEQRES 17 A 371 THR LYS GLY LEU ASP ARG SER LEU LYS ALA LEU SER ALA SEQRES 18 A 371 LEU PRO LYS ALA LEU ARG ARG ARG THR ARG LEU ILE ALA SEQRES 19 A 371 ILE GLY GLN ASP ASP PRO LYS PRO PHE LEU LEU GLN ILE SEQRES 20 A 371 ALA ALA LEU GLY LEU ASN ASP GLN VAL GLN ILE LEU LYS SEQRES 21 A 371 GLY ARG SER ASP ILE PRO ARG PHE LEU LEU GLY ALA ASP SEQRES 22 A 371 LEU LEU ILE HIS PRO ALA TYR ASN GLU ASN THR GLY THR SEQRES 23 A 371 VAL LEU LEU GLU ALA LEU VAL SER GLY LEU PRO VAL LEU SEQRES 24 A 371 VAL THR ASP VAL CYS GLY TYR ALA HIS TYR ILE ALA GLU SEQRES 25 A 371 ALA ASP ALA GLY ARG VAL LEU PRO SER PRO PHE GLU GLN SEQRES 26 A 371 ASP SER LEU ASN ARG LEU LEU ALA GLU MET LEU GLU ASP SEQRES 27 A 371 ALA PRO ALA ARG ALA ALA TRP SER ARG ASN GLY LEU ALA SEQRES 28 A 371 TYR ALA ASP HIS ALA ASP LEU TYR SER MET PRO GLN ARG SEQRES 29 A 371 ALA ALA ASP LEU ILE LEU GLY SEQRES 1 B 371 MET ALA THR LEU ALA PHE ILE LEU TYR LYS TYR PHE PRO SEQRES 2 B 371 PHE GLY GLY LEU GLN ARG ASP PHE MET ARG ILE ALA LEU SEQRES 3 B 371 GLU CYS GLN ARG ARG GLY HIS ASP ILE ARG VAL TYR THR SEQRES 4 B 371 LEU ILE TRP GLU GLY ASP VAL PRO ASP GLY PHE GLU VAL SEQRES 5 B 371 LEU VAL ALA PRO VAL ARG SER ILE PHE ASN HIS ARG ARG SEQRES 6 B 371 ASN GLU LYS PHE THR ALA TRP VAL ARG ALA ASP LEU ASP SEQRES 7 B 371 ARG ARG PRO VAL GLN ARG VAL ILE GLY PHE ASN LYS MET SEQRES 8 B 371 PRO GLY LEU ASP VAL TYR TYR ALA ALA ASP ALA CYS PHE SEQRES 9 B 371 GLU GLU LYS ALA GLN THR LEU ARG ASN PRO LEU TYR ARG SEQRES 10 B 371 GLN TRP GLY ARG TYR ARG HIS PHE ALA GLY TYR GLU ARG SEQRES 11 B 371 ALA VAL PHE ASP PRO ALA SER LYS THR GLU ILE LEU MET SEQRES 12 B 371 ILE SER GLU VAL GLN GLN PRO LEU PHE VAL LYS HIS TYR SEQRES 13 B 371 GLY THR GLN ALA GLU ARG PHE HIS LEU LEU PRO PRO GLY SEQRES 14 B 371 ILE SER GLN ASP ARG ARG ALA PRO ALA ASN ALA ALA ASP SEQRES 15 B 371 VAL ARG ALA GLU PHE ARG ARG GLU PHE GLY LEU GLU GLU SEQRES 16 B 371 ASP ASP LEU LEU LEU VAL GLN ILE GLY SER GLY PHE LYS SEQRES 17 B 371 THR LYS GLY LEU ASP ARG SER LEU LYS ALA LEU SER ALA SEQRES 18 B 371 LEU PRO LYS ALA LEU ARG ARG ARG THR ARG LEU ILE ALA SEQRES 19 B 371 ILE GLY GLN ASP ASP PRO LYS PRO PHE LEU LEU GLN ILE SEQRES 20 B 371 ALA ALA LEU GLY LEU ASN ASP GLN VAL GLN ILE LEU LYS SEQRES 21 B 371 GLY ARG SER ASP ILE PRO ARG PHE LEU LEU GLY ALA ASP SEQRES 22 B 371 LEU LEU ILE HIS PRO ALA TYR ASN GLU ASN THR GLY THR SEQRES 23 B 371 VAL LEU LEU GLU ALA LEU VAL SER GLY LEU PRO VAL LEU SEQRES 24 B 371 VAL THR ASP VAL CYS GLY TYR ALA HIS TYR ILE ALA GLU SEQRES 25 B 371 ALA ASP ALA GLY ARG VAL LEU PRO SER PRO PHE GLU GLN SEQRES 26 B 371 ASP SER LEU ASN ARG LEU LEU ALA GLU MET LEU GLU ASP SEQRES 27 B 371 ALA PRO ALA ARG ALA ALA TRP SER ARG ASN GLY LEU ALA SEQRES 28 B 371 TYR ALA ASP HIS ALA ASP LEU TYR SER MET PRO GLN ARG SEQRES 29 B 371 ALA ALA ASP LEU ILE LEU GLY HET UD2 A 401 39 HET ACT A 402 4 HET UDP B 401 25 HETNAM UD2 URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE HETNAM ACT ACETATE ION HETNAM UDP URIDINE-5'-DIPHOSPHATE HETSYN UD2 (2R,3R,4R,5R,6R)-3-(ACETYLAMINO)-4,5-DIHYDROXY-6- HETSYN 2 UD2 (HYDROXYMETHYL)TETRAHYDRO-2H-PYRAN-2-YL [(2R,3S,4R, HETSYN 3 UD2 5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-3,4- HETSYN 4 UD2 DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN HETSYN 5 UD2 DIPHOSPHATE FORMUL 3 UD2 C17 H27 N3 O17 P2 FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 UDP C9 H14 N2 O12 P2 FORMUL 6 HOH *94(H2 O) HELIX 1 AA1 GLY A 14 ARG A 30 1 17 HELIX 2 AA2 PHE A 60 ARG A 79 1 20 HELIX 3 AA3 CYS A 102 ALA A 107 1 6 HELIX 4 AA4 TRP A 118 ASP A 133 1 16 HELIX 5 AA5 SER A 144 VAL A 146 5 3 HELIX 6 AA6 GLN A 147 GLY A 156 1 10 HELIX 7 AA7 GLN A 158 GLU A 160 5 3 HELIX 8 AA8 SER A 170 ARG A 174 5 5 HELIX 9 AA9 ASN A 178 GLY A 191 1 14 HELIX 10 AB1 GLY A 210 ALA A 220 1 11 HELIX 11 AB2 PRO A 222 ARG A 227 1 6 HELIX 12 AB3 PRO A 239 LEU A 249 1 11 HELIX 13 AB4 LEU A 251 ASP A 253 5 3 HELIX 14 AB5 ASP A 263 ALA A 271 1 9 HELIX 15 AB6 GLY A 284 SER A 293 1 10 HELIX 16 AB7 TYR A 305 ASP A 313 1 9 HELIX 17 AB8 GLU A 323 ASP A 337 1 15 HELIX 18 AB9 ASP A 337 ALA A 355 1 19 HELIX 19 AC1 SER A 359 GLY A 370 1 12 HELIX 20 AC2 GLY B 14 ARG B 30 1 17 HELIX 21 AC3 PHE B 60 ARG B 79 1 20 HELIX 22 AC4 CYS B 102 GLN B 108 1 7 HELIX 23 AC5 TRP B 118 ASP B 133 1 16 HELIX 24 AC6 SER B 144 VAL B 146 5 3 HELIX 25 AC7 GLN B 147 GLY B 156 1 10 HELIX 26 AC8 GLN B 158 GLU B 160 5 3 HELIX 27 AC9 SER B 170 ARG B 174 5 5 HELIX 28 AD1 ASN B 178 GLY B 191 1 14 HELIX 29 AD2 GLY B 210 ALA B 220 1 11 HELIX 30 AD3 PRO B 222 ARG B 227 1 6 HELIX 31 AD4 PRO B 239 LEU B 249 1 11 HELIX 32 AD5 LEU B 251 ASP B 253 5 3 HELIX 33 AD6 ASP B 263 ALA B 271 1 9 HELIX 34 AD7 GLY B 284 GLY B 294 1 11 HELIX 35 AD8 TYR B 305 ASP B 313 1 9 HELIX 36 AD9 GLU B 323 ASP B 337 1 15 HELIX 37 AE1 ASP B 337 ALA B 355 1 19 HELIX 38 AE2 SER B 359 GLY B 370 1 12 SHEET 1 AA1 7 PHE A 49 VAL A 53 0 SHEET 2 AA1 7 ILE A 34 THR A 38 1 N VAL A 36 O GLU A 50 SHEET 3 AA1 7 LEU A 3 ILE A 6 1 N PHE A 5 O ARG A 35 SHEET 4 AA1 7 ARG A 83 GLY A 86 1 O ILE A 85 N ALA A 4 SHEET 5 AA1 7 VAL A 95 TYR A 97 1 O VAL A 95 N GLY A 86 SHEET 6 AA1 7 GLU A 139 MET A 142 1 O LEU A 141 N TYR A 96 SHEET 7 AA1 7 PHE A 162 LEU A 164 1 O HIS A 163 N MET A 142 SHEET 1 AA2 2 LYS A 9 TYR A 10 0 SHEET 2 AA2 2 ILE A 40 TRP A 41 1 O ILE A 40 N TYR A 10 SHEET 1 AA3 6 VAL A 255 LEU A 258 0 SHEET 2 AA3 6 THR A 229 ILE A 234 1 N ALA A 233 O LEU A 258 SHEET 3 AA3 6 LEU A 197 ILE A 202 1 N LEU A 199 O ARG A 230 SHEET 4 AA3 6 LEU A 273 HIS A 276 1 O ILE A 275 N VAL A 200 SHEET 5 AA3 6 VAL A 297 THR A 300 1 O LEU A 298 N LEU A 274 SHEET 6 AA3 6 GLY A 315 LEU A 318 1 O LEU A 318 N VAL A 299 SHEET 1 AA4 7 PHE B 49 VAL B 53 0 SHEET 2 AA4 7 ILE B 34 THR B 38 1 N VAL B 36 O LEU B 52 SHEET 3 AA4 7 LEU B 3 ILE B 6 1 N LEU B 3 O ARG B 35 SHEET 4 AA4 7 ARG B 83 GLY B 86 1 O ILE B 85 N ILE B 6 SHEET 5 AA4 7 VAL B 95 TYR B 97 1 O VAL B 95 N GLY B 86 SHEET 6 AA4 7 GLU B 139 MET B 142 1 O LEU B 141 N TYR B 96 SHEET 7 AA4 7 PHE B 162 LEU B 164 1 O HIS B 163 N MET B 142 SHEET 1 AA5 2 LYS B 9 TYR B 10 0 SHEET 2 AA5 2 ILE B 40 TRP B 41 1 O ILE B 40 N TYR B 10 SHEET 1 AA6 6 VAL B 255 LEU B 258 0 SHEET 2 AA6 6 THR B 229 ILE B 234 1 N ALA B 233 O LEU B 258 SHEET 3 AA6 6 LEU B 197 ILE B 202 1 N LEU B 199 O ARG B 230 SHEET 4 AA6 6 LEU B 273 HIS B 276 1 O LEU B 273 N VAL B 200 SHEET 5 AA6 6 VAL B 297 THR B 300 1 O LEU B 298 N HIS B 276 SHEET 6 AA6 6 GLY B 315 LEU B 318 1 O LEU B 318 N VAL B 299 CISPEP 1 SER A 320 PRO A 321 0 -4.93 CISPEP 2 SER B 320 PRO B 321 0 -4.48 CRYST1 41.762 109.963 94.326 90.00 90.22 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023945 0.000000 0.000093 0.00000 SCALE2 0.000000 0.009094 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010602 0.00000