HEADER SUGAR BINDING PROTEIN 05-OCT-22 8B97 TITLE N-TERMINAL BETA-TREFOIL LECTIN DOMAIN OF THE LACCARIA BICOLOR LECTIN TITLE 2 IN COMPLEX WITH N-ACETYL-LACTOSAMINE CAVEAT 8B97 NAG B 1 HAS WRONG CHIRALITY AT ATOM C1 NAG C 1 HAS WRONG CAVEAT 2 8B97 CHIRALITY AT ATOM C1 NAG D 1 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-TREFOIL DOMAIN OF THE LBL LECTIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACCARIA BICOLOR S238N-H53; SOURCE 3 ORGANISM_TAXID: 1035139; SOURCE 4 STRAIN: S238N-H82 / ATCC MYA-4686; SOURCE 5 GENE: LACBIDRAFT_318163; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ATOMIC RESOLUTION, BETA-TREFOIL, FRUITING-BODY LECTIN, SUGAR- KEYWDS 2 SPECIFICITY, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR I.ACEBRON,M.A.CAMPANERO-RHODES,D.SOLIS,M.MENENDEZ,C.GARCIA,M.P.LILLO, AUTHOR 2 J.M.MANCHENO REVDAT 2 07-FEB-24 8B97 1 REMARK REVDAT 1 22-FEB-23 8B97 0 JRNL AUTH I.ACEBRON,M.A.CAMPANERO-RHODES,D.SOLIS,M.MENENDEZ,C.GARCIA, JRNL AUTH 2 M.P.LILLO,J.M.MANCHENO JRNL TITL ATOMIC CRYSTAL STRUCTURE AND SUGAR SPECIFICITY OF A JRNL TITL 2 BETA-TREFOIL LECTIN DOMAIN FROM THE ECTOMYCORRHIZAL JRNL TITL 3 BASIDIOMYCETE LACCARIA BICOLOR. JRNL REF INT.J.BIOL.MACROMOL. V. 233 23507 2023 JRNL REFN ISSN 0141-8130 JRNL PMID 36754262 JRNL DOI 10.1016/J.IJBIOMAC.2023.123507 REMARK 2 REMARK 2 RESOLUTION. 0.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 3 NUMBER OF REFLECTIONS : 82529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.152 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5500 - 2.9800 1.00 3011 166 0.1763 0.1796 REMARK 3 2 2.9800 - 2.3700 1.00 2900 137 0.1651 0.1826 REMARK 3 3 2.3700 - 2.0700 1.00 2860 156 0.1411 0.1765 REMARK 3 4 2.0700 - 1.8800 1.00 2810 147 0.1340 0.1603 REMARK 3 5 1.8800 - 1.7400 1.00 2833 153 0.1362 0.1628 REMARK 3 6 1.7400 - 1.6400 1.00 2814 126 0.1352 0.1405 REMARK 3 7 1.6400 - 1.5600 1.00 2818 138 0.1305 0.1479 REMARK 3 8 1.5600 - 1.4900 1.00 2792 156 0.1298 0.1253 REMARK 3 9 1.4900 - 1.4300 1.00 2805 141 0.1270 0.1167 REMARK 3 10 1.4300 - 1.3800 1.00 2802 143 0.1348 0.1523 REMARK 3 11 1.3800 - 1.3400 1.00 2802 128 0.1290 0.1530 REMARK 3 12 1.3400 - 1.3000 1.00 2765 161 0.1256 0.1460 REMARK 3 13 1.3000 - 1.2700 1.00 2781 152 0.1275 0.1364 REMARK 3 14 1.2700 - 1.2400 1.00 2764 150 0.1222 0.1187 REMARK 3 15 1.2400 - 1.2100 1.00 2778 146 0.1197 0.1187 REMARK 3 16 1.2100 - 1.1800 1.00 2792 154 0.1193 0.1115 REMARK 3 17 1.1800 - 1.1600 1.00 2770 139 0.1221 0.1489 REMARK 3 18 1.1600 - 1.1400 1.00 2761 140 0.1170 0.1249 REMARK 3 19 1.1400 - 1.1200 1.00 2776 136 0.1228 0.1350 REMARK 3 20 1.1200 - 1.1000 1.00 2779 149 0.1281 0.1275 REMARK 3 21 1.1000 - 1.0800 1.00 2778 121 0.1248 0.1278 REMARK 3 22 1.0800 - 1.0600 1.00 2762 141 0.1299 0.1244 REMARK 3 23 1.0600 - 1.0500 1.00 2737 164 0.1300 0.1324 REMARK 3 24 1.0500 - 1.0300 0.99 2728 138 0.1350 0.1574 REMARK 3 25 1.0300 - 1.0200 0.94 2576 147 0.1439 0.1510 REMARK 3 26 1.0200 - 1.0100 0.89 2455 157 0.1448 0.1538 REMARK 3 27 1.0100 - 0.9900 0.83 2260 127 0.1583 0.1681 REMARK 3 28 0.9900 - 0.9800 0.75 2062 120 0.1599 0.1664 REMARK 3 29 0.9800 - 0.9700 0.67 1833 92 0.1729 0.2006 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.056 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.004 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 4.94 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 7.95 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1408 REMARK 3 ANGLE : 1.145 1938 REMARK 3 CHIRALITY : 0.080 228 REMARK 3 PLANARITY : 0.014 240 REMARK 3 DIHEDRAL : 7.047 179 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 20 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:6) REMARK 3 ORIGIN FOR THE GROUP (A): 65.4147 -3.1836 49.4552 REMARK 3 T TENSOR REMARK 3 T11: 0.0944 T22: 0.0553 REMARK 3 T33: 0.0895 T12: -0.0132 REMARK 3 T13: 0.0095 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 7.0210 L22: 6.9958 REMARK 3 L33: 7.3324 L12: -2.7858 REMARK 3 L13: 2.5076 L23: -0.0576 REMARK 3 S TENSOR REMARK 3 S11: 0.0024 S12: 0.3549 S13: -0.2374 REMARK 3 S21: -0.0900 S22: 0.0071 S23: -0.3579 REMARK 3 S31: 0.4232 S32: 0.4738 S33: -0.0400 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 7:13) REMARK 3 ORIGIN FOR THE GROUP (A): 54.6019 4.2351 44.4946 REMARK 3 T TENSOR REMARK 3 T11: 0.0498 T22: 0.0250 REMARK 3 T33: 0.0374 T12: -0.0010 REMARK 3 T13: 0.0071 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 4.2672 L22: 4.0407 REMARK 3 L33: 1.4992 L12: -3.1342 REMARK 3 L13: -0.1736 L23: 1.6866 REMARK 3 S TENSOR REMARK 3 S11: 0.1104 S12: 0.1334 S13: -0.0931 REMARK 3 S21: -0.2409 S22: -0.0289 S23: -0.0235 REMARK 3 S31: -0.0357 S32: 0.0452 S33: -0.0833 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 14:21) REMARK 3 ORIGIN FOR THE GROUP (A): 55.1681 7.6549 59.9646 REMARK 3 T TENSOR REMARK 3 T11: 0.0250 T22: 0.0252 REMARK 3 T33: 0.0302 T12: -0.0047 REMARK 3 T13: 0.0082 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.2119 L22: 1.4752 REMARK 3 L33: 2.5014 L12: -0.4933 REMARK 3 L13: 0.5138 L23: 0.3578 REMARK 3 S TENSOR REMARK 3 S11: 0.0215 S12: -0.1625 S13: -0.1027 REMARK 3 S21: 0.1106 S22: 0.0535 S23: 0.0934 REMARK 3 S31: 0.0712 S32: -0.1522 S33: -0.0643 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 22:27) REMARK 3 ORIGIN FOR THE GROUP (A): 55.1693 16.7898 56.0120 REMARK 3 T TENSOR REMARK 3 T11: 0.0214 T22: 0.0165 REMARK 3 T33: 0.0252 T12: 0.0005 REMARK 3 T13: 0.0008 T23: -0.0079 REMARK 3 L TENSOR REMARK 3 L11: 1.1362 L22: 1.3743 REMARK 3 L33: 0.4452 L12: -0.1166 REMARK 3 L13: -0.1309 L23: -0.4760 REMARK 3 S TENSOR REMARK 3 S11: 0.0001 S12: -0.0502 S13: 0.0702 REMARK 3 S21: 0.0648 S22: 0.0078 S23: 0.0091 REMARK 3 S31: -0.0625 S32: -0.0125 S33: 0.0037 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 28:35) REMARK 3 ORIGIN FOR THE GROUP (A): 56.9838 24.1965 54.6923 REMARK 3 T TENSOR REMARK 3 T11: 0.0541 T22: 0.0237 REMARK 3 T33: 0.0666 T12: -0.0059 REMARK 3 T13: 0.0023 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.8624 L22: 2.3690 REMARK 3 L33: 0.4837 L12: -0.6712 REMARK 3 L13: 0.5176 L23: 0.4213 REMARK 3 S TENSOR REMARK 3 S11: 0.0039 S12: 0.0491 S13: 0.3354 REMARK 3 S21: -0.1350 S22: -0.0450 S23: -0.1025 REMARK 3 S31: -0.1469 S32: 0.0252 S33: 0.0115 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 36:46) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1728 15.2139 56.6095 REMARK 3 T TENSOR REMARK 3 T11: 0.0192 T22: 0.0225 REMARK 3 T33: 0.0322 T12: 0.0027 REMARK 3 T13: 0.0099 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.8094 L22: 0.0767 REMARK 3 L33: 1.7706 L12: -0.0674 REMARK 3 L13: 0.3752 L23: 0.1713 REMARK 3 S TENSOR REMARK 3 S11: -0.0178 S12: -0.0440 S13: -0.0384 REMARK 3 S21: 0.0307 S22: -0.0017 S23: 0.0527 REMARK 3 S31: -0.0283 S32: -0.1194 S33: -0.0027 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 47:56) REMARK 3 ORIGIN FOR THE GROUP (A): 61.9984 7.7012 42.4597 REMARK 3 T TENSOR REMARK 3 T11: 0.0304 T22: 0.0351 REMARK 3 T33: 0.0393 T12: -0.0042 REMARK 3 T13: 0.0122 T23: -0.0104 REMARK 3 L TENSOR REMARK 3 L11: 0.1688 L22: 0.5121 REMARK 3 L33: 0.4248 L12: -0.0622 REMARK 3 L13: 0.1301 L23: -0.1576 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.1217 S13: -0.0589 REMARK 3 S21: -0.1039 S22: -0.0487 S23: -0.0434 REMARK 3 S31: -0.0196 S32: 0.0162 S33: -0.0308 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 57:64) REMARK 3 ORIGIN FOR THE GROUP (A): 65.5021 6.5967 43.6825 REMARK 3 T TENSOR REMARK 3 T11: 0.0401 T22: 0.0375 REMARK 3 T33: 0.0526 T12: -0.0036 REMARK 3 T13: 0.0124 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 4.1082 L22: 2.4790 REMARK 3 L33: 1.3332 L12: -1.8676 REMARK 3 L13: -1.3044 L23: 1.0079 REMARK 3 S TENSOR REMARK 3 S11: -0.0869 S12: 0.0238 S13: -0.0759 REMARK 3 S21: -0.0574 S22: 0.0707 S23: -0.1870 REMARK 3 S31: 0.0963 S32: 0.0739 S33: 0.0253 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 65:72) REMARK 3 ORIGIN FOR THE GROUP (A): 57.0654 17.7611 45.2786 REMARK 3 T TENSOR REMARK 3 T11: 0.0184 T22: 0.0142 REMARK 3 T33: 0.0327 T12: 0.0008 REMARK 3 T13: 0.0028 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 2.1656 L22: 1.2308 REMARK 3 L33: 1.7363 L12: -0.6628 REMARK 3 L13: 0.1267 L23: -0.6752 REMARK 3 S TENSOR REMARK 3 S11: 0.0354 S12: 0.1316 S13: 0.0365 REMARK 3 S21: -0.0233 S22: -0.0003 S23: 0.0859 REMARK 3 S31: -0.0409 S32: -0.0500 S33: -0.0236 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 73:82) REMARK 3 ORIGIN FOR THE GROUP (A): 71.9551 19.0158 54.4743 REMARK 3 T TENSOR REMARK 3 T11: 0.0924 T22: 0.0522 REMARK 3 T33: 0.0748 T12: -0.0364 REMARK 3 T13: -0.0293 T23: 0.0073 REMARK 3 L TENSOR REMARK 3 L11: 0.0736 L22: 1.2915 REMARK 3 L33: 1.4280 L12: -0.2775 REMARK 3 L13: -0.1763 L23: 0.5840 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: -0.0718 S13: 0.0757 REMARK 3 S21: 0.3172 S22: -0.1280 S23: -0.4336 REMARK 3 S31: -0.2840 S32: 0.2596 S33: -0.0092 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 83:89) REMARK 3 ORIGIN FOR THE GROUP (A): 64.0288 18.7357 43.6941 REMARK 3 T TENSOR REMARK 3 T11: 0.0291 T22: 0.0619 REMARK 3 T33: 0.0417 T12: -0.0053 REMARK 3 T13: -0.0003 T23: 0.0116 REMARK 3 L TENSOR REMARK 3 L11: 0.9304 L22: 2.7436 REMARK 3 L33: 1.8853 L12: -0.8467 REMARK 3 L13: -0.7968 L23: -0.1106 REMARK 3 S TENSOR REMARK 3 S11: 0.1142 S12: 0.2498 S13: 0.0965 REMARK 3 S21: -0.2000 S22: -0.0185 S23: 0.0303 REMARK 3 S31: -0.1431 S32: -0.1166 S33: -0.0583 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 90:94) REMARK 3 ORIGIN FOR THE GROUP (A): 71.2832 15.4640 43.7505 REMARK 3 T TENSOR REMARK 3 T11: 0.0208 T22: 0.0254 REMARK 3 T33: 0.0271 T12: -0.0016 REMARK 3 T13: 0.0069 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 2.8306 L22: 1.9931 REMARK 3 L33: 2.1346 L12: 1.6103 REMARK 3 L13: -0.0858 L23: 1.4130 REMARK 3 S TENSOR REMARK 3 S11: 0.0456 S12: 0.1055 S13: 0.0494 REMARK 3 S21: -0.0065 S22: 0.0376 S23: -0.0244 REMARK 3 S31: -0.2705 S32: -0.0089 S33: -0.0003 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 95:102) REMARK 3 ORIGIN FOR THE GROUP (A): 67.0778 2.5061 51.4560 REMARK 3 T TENSOR REMARK 3 T11: 0.0485 T22: 0.0198 REMARK 3 T33: 0.0385 T12: 0.0044 REMARK 3 T13: 0.0046 T23: -0.0090 REMARK 3 L TENSOR REMARK 3 L11: 1.2777 L22: 4.2853 REMARK 3 L33: 1.6853 L12: 1.3717 REMARK 3 L13: -0.9190 L23: -2.6854 REMARK 3 S TENSOR REMARK 3 S11: -0.0581 S12: 0.0078 S13: -0.1369 REMARK 3 S21: 0.0201 S22: -0.0726 S23: -0.2029 REMARK 3 S31: 0.1085 S32: 0.1114 S33: 0.1053 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 103:108) REMARK 3 ORIGIN FOR THE GROUP (A): 60.5944 -2.9463 61.4884 REMARK 3 T TENSOR REMARK 3 T11: 0.0984 T22: 0.0367 REMARK 3 T33: 0.1559 T12: -0.0110 REMARK 3 T13: -0.0182 T23: 0.0321 REMARK 3 L TENSOR REMARK 3 L11: 5.7121 L22: 5.9457 REMARK 3 L33: 0.5930 L12: 0.9498 REMARK 3 L13: -0.3895 L23: 1.7428 REMARK 3 S TENSOR REMARK 3 S11: -0.0495 S12: -0.6589 S13: -0.3898 REMARK 3 S21: 0.3965 S22: -0.0514 S23: 0.1921 REMARK 3 S31: 0.2937 S32: -0.0470 S33: 0.0929 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 109:114) REMARK 3 ORIGIN FOR THE GROUP (A): 68.3169 4.8232 53.8990 REMARK 3 T TENSOR REMARK 3 T11: 0.0507 T22: 0.0247 REMARK 3 T33: 0.0322 T12: 0.0094 REMARK 3 T13: -0.0039 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.8594 L22: 0.9254 REMARK 3 L33: 2.3887 L12: 0.5399 REMARK 3 L13: -1.1604 L23: -0.8382 REMARK 3 S TENSOR REMARK 3 S11: -0.0453 S12: 0.0358 S13: -0.0792 REMARK 3 S21: -0.0772 S22: 0.0089 S23: -0.1594 REMARK 3 S31: 0.1212 S32: 0.1881 S33: 0.0314 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN A AND RESID 115:123) REMARK 3 ORIGIN FOR THE GROUP (A): 69.2053 10.7922 57.9406 REMARK 3 T TENSOR REMARK 3 T11: 0.0215 T22: 0.0255 REMARK 3 T33: 0.0230 T12: 0.0019 REMARK 3 T13: -0.0066 T23: 0.0027 REMARK 3 L TENSOR REMARK 3 L11: 1.4376 L22: 0.7449 REMARK 3 L33: 1.9298 L12: 0.3195 REMARK 3 L13: -0.6291 L23: -0.0916 REMARK 3 S TENSOR REMARK 3 S11: -0.0591 S12: -0.0049 S13: 0.0098 REMARK 3 S21: -0.0096 S22: 0.0181 S23: -0.0845 REMARK 3 S31: 0.0667 S32: 0.1531 S33: 0.0223 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN A AND RESID 124:133) REMARK 3 ORIGIN FOR THE GROUP (A): 62.6630 17.8700 65.4887 REMARK 3 T TENSOR REMARK 3 T11: 0.0649 T22: 0.0605 REMARK 3 T33: 0.0637 T12: 0.0099 REMARK 3 T13: -0.0175 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 1.2335 L22: 0.5474 REMARK 3 L33: 2.4008 L12: -0.8020 REMARK 3 L13: -0.4470 L23: 0.3058 REMARK 3 S TENSOR REMARK 3 S11: -0.1001 S12: -0.2414 S13: 0.3196 REMARK 3 S21: 0.1856 S22: 0.0642 S23: -0.1600 REMARK 3 S31: -0.2052 S32: -0.1126 S33: 0.0089 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN A AND RESID 134:140) REMARK 3 ORIGIN FOR THE GROUP (A): 73.9156 7.9727 61.1699 REMARK 3 T TENSOR REMARK 3 T11: 0.0424 T22: 0.0678 REMARK 3 T33: 0.0607 T12: 0.0091 REMARK 3 T13: -0.0217 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 1.5314 L22: 0.9683 REMARK 3 L33: 2.2918 L12: 0.4850 REMARK 3 L13: -1.1381 L23: 0.3384 REMARK 3 S TENSOR REMARK 3 S11: -0.0100 S12: -0.0750 S13: -0.1957 REMARK 3 S21: 0.1179 S22: 0.0067 S23: -0.1831 REMARK 3 S31: 0.1685 S32: 0.2819 S33: 0.0036 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: (CHAIN A AND RESID 141:147) REMARK 3 ORIGIN FOR THE GROUP (A): 65.3186 4.6280 62.9187 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: 0.0271 REMARK 3 T33: 0.0353 T12: 0.0015 REMARK 3 T13: -0.0148 T23: 0.0019 REMARK 3 L TENSOR REMARK 3 L11: 2.1237 L22: 1.3454 REMARK 3 L33: 2.3482 L12: -0.1026 REMARK 3 L13: 0.9040 L23: 0.0610 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: -0.0849 S13: -0.1367 REMARK 3 S21: 0.0995 S22: -0.0260 S23: -0.1003 REMARK 3 S31: 0.1656 S32: 0.0937 S33: -0.0079 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: (CHAIN A AND RESID 148:152) REMARK 3 ORIGIN FOR THE GROUP (A): 50.8988 3.9516 53.0261 REMARK 3 T TENSOR REMARK 3 T11: 0.0381 T22: 0.0476 REMARK 3 T33: 0.1283 T12: -0.0298 REMARK 3 T13: -0.0322 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 3.4332 L22: 1.3062 REMARK 3 L33: 3.1360 L12: 0.3615 REMARK 3 L13: 2.1432 L23: 0.5004 REMARK 3 S TENSOR REMARK 3 S11: 0.0151 S12: -0.2016 S13: 0.1605 REMARK 3 S21: 0.0437 S22: 0.0359 S23: 0.4025 REMARK 3 S31: 0.1665 S32: -0.3353 S33: -0.0474 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8B97 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292125955. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82583 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.970 REMARK 200 RESOLUTION RANGE LOW (A) : 44.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 200 DATA REDUNDANCY : 12.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 31.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.1 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 10.90 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2Y9F REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.11 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% (W/V) PEG 6000, 0.1 M SODIUM REMARK 280 ACETATE, PH 5.0, AND 0.2 M AMMONIUM CHLORIDE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 26.23600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.51300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.23600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.51300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 325 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 357 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 2 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 35 -155.74 -163.97 REMARK 500 ILE A 133 -159.74 -153.71 REMARK 500 THR A 138 44.34 -109.19 REMARK 500 SER A 139 -153.72 -136.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 425 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 427 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 431 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH A 433 DISTANCE = 8.13 ANGSTROMS DBREF 8B97 A 1 152 UNP B0D650 B0D650_LACBS 1 152 SEQRES 1 A 152 MET SER ASN GLU TYR ASN PRO PRO LEU GLY ILE ALA PHE SEQRES 2 A 152 ARG LEU CYS GLY LEU ALA SER ASP ARG VAL LEU PHE SER SEQRES 3 A 152 ARG VAL SER PRO SER PRO GLU VAL PHE HIS HIS PRO LYS SEQRES 4 A 152 SER GLU VAL TYR PRO ASP GLN TRP PHE VAL ALA ILE PRO SEQRES 5 A 152 GLY SER GLY GLN ASN ALA GLY CYS TYR ALA ILE LYS SER SEQRES 6 A 152 LYS ASN THR GLY LYS VAL LEU PHE SER ARG MET SER PRO SEQRES 7 A 152 ASP PRO ARG VAL GLY HIS ILE ASP GLY ASP GLY LYS TYR SEQRES 8 A 152 PRO ASP ASN TRP PHE LYS PHE GLU ALA GLY SER GLY LYS SEQRES 9 A 152 TYR ALA GLY TYR PHE ARG LEU ARG ALA VAL ALA SER ASP SEQRES 10 A 152 THR VAL LEU VAL SER ARG THR SER THR GLY THR ASP THR SEQRES 11 A 152 GLN VAL ILE ASN TYR PRO ALA THR SER ALA LYS TYR ASP SEQRES 12 A 152 ASP GLN TYR PHE THR ILE LEU PHE ASP HET NAG B 1 29 HET GAL B 2 22 HET NAG C 1 29 HET GAL C 2 22 HET NAG D 1 29 HET GAL D 2 22 HET NAG E 1 29 HET GAL E 2 22 HET NAG F 1 29 HET GAL F 2 22 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM GAL BETA-D-GALACTOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 2 GAL 5(C6 H12 O6) FORMUL 7 HOH *235(H2 O) HELIX 1 AA1 TYR A 43 GLN A 46 5 4 HELIX 2 AA2 SER A 54 ALA A 58 5 5 HELIX 3 AA3 TYR A 91 ASN A 94 5 4 HELIX 4 AA4 SER A 102 ALA A 106 5 5 HELIX 5 AA5 GLY A 127 THR A 130 5 4 HELIX 6 AA6 TYR A 142 GLN A 145 5 4 SHEET 1 AA1 5 GLU A 4 TYR A 5 0 SHEET 2 AA1 5 PHE A 96 ALA A 100 -1 O PHE A 98 N TYR A 5 SHEET 3 AA1 5 PHE A 109 ALA A 113 -1 O ARG A 112 N LYS A 97 SHEET 4 AA1 5 THR A 118 SER A 122 -1 O THR A 118 N ALA A 113 SHEET 5 AA1 5 VAL A 132 PRO A 136 -1 O TYR A 135 N VAL A 119 SHEET 1 AA2 2 ARG A 14 GLY A 17 0 SHEET 2 AA2 2 PHE A 147 LEU A 150 -1 O LEU A 150 N ARG A 14 SHEET 1 AA3 2 ARG A 22 SER A 26 0 SHEET 2 AA3 2 VAL A 34 PRO A 38 -1 O HIS A 37 N VAL A 23 SHEET 1 AA4 2 PHE A 48 PRO A 52 0 SHEET 2 AA4 2 TYR A 61 SER A 65 -1 O LYS A 64 N VAL A 49 SHEET 1 AA5 2 VAL A 71 SER A 74 0 SHEET 2 AA5 2 VAL A 82 ILE A 85 -1 O ILE A 85 N VAL A 71 LINK O4 ANAG B 1 C1 AGAL B 2 1555 1555 1.41 LINK O4 NAG C 1 C1 GAL C 2 1555 1555 1.41 LINK O4 ANAG D 1 C1 AGAL D 2 1555 1555 1.40 LINK O4 BNAG E 1 C1 BGAL E 2 1555 1555 1.40 LINK O4 BNAG F 1 C1 BGAL F 2 1555 1555 1.40 CISPEP 1 SER A 29 PRO A 30 0 -11.54 CISPEP 2 SER A 31 PRO A 32 0 -0.31 CISPEP 3 SER A 77 PRO A 78 0 -4.34 CISPEP 4 ASP A 79 PRO A 80 0 -4.40 CRYST1 52.472 61.026 44.549 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019058 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022447 0.00000