HEADER OXIDOREDUCTASE 12-OCT-22 8BBB TITLE IPNS H270A VARIANT IN COMPLEX WITH ACV EXPOSED TO O2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOPENICILLIN N SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IPNS; COMPND 5 EC: 1.21.3.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIDULANS FGSC A4; SOURCE 3 ORGANISM_TAXID: 227321; SOURCE 4 STRAIN: FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139; SOURCE 5 GENE: IPNA, IPS, AN2622; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PCOLD_IPNS_H270A KEYWDS ISOPENICILLIN N SYNTHASE, ANTIBIOTIC BIOSYNTHESIS, ANAEROBIC, KEYWDS 2 PENICILLINS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR P.RABE,C.J.SCHOFIELD REVDAT 1 25-OCT-23 8BBB 0 JRNL AUTH P.RABE,C.J.SCHOFIELD JRNL TITL IPNS H270A VARIANT IN COMPLEX WITH ACV EXPOSED TO O2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 44124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 2194 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.7600 - 3.9600 1.00 2824 153 0.1617 0.1676 REMARK 3 2 3.9600 - 3.1400 1.00 2688 130 0.1424 0.1771 REMARK 3 3 3.1400 - 2.7400 1.00 2653 137 0.1649 0.1673 REMARK 3 4 2.7400 - 2.4900 1.00 2663 133 0.1610 0.1994 REMARK 3 5 2.4900 - 2.3100 1.00 2639 123 0.1557 0.2017 REMARK 3 6 2.3100 - 2.1800 1.00 2589 140 0.1565 0.1940 REMARK 3 7 2.1800 - 2.0700 1.00 2620 126 0.1607 0.1759 REMARK 3 8 2.0700 - 1.9800 1.00 2600 155 0.1669 0.2316 REMARK 3 9 1.9800 - 1.9000 1.00 2601 137 0.1894 0.2281 REMARK 3 10 1.9000 - 1.8400 1.00 2593 150 0.2161 0.2389 REMARK 3 11 1.8400 - 1.7800 1.00 2585 131 0.2370 0.2800 REMARK 3 12 1.7800 - 1.7300 1.00 2588 127 0.2593 0.2816 REMARK 3 13 1.7300 - 1.6800 1.00 2606 124 0.2793 0.3309 REMARK 3 14 1.6800 - 1.6400 1.00 2582 137 0.3074 0.2925 REMARK 3 15 1.6400 - 1.6000 1.00 2540 145 0.3299 0.3454 REMARK 3 16 1.6000 - 1.5700 0.99 2559 146 0.3564 0.4475 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.760 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 18.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 37 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8746 -4.6032 14.5957 REMARK 3 T TENSOR REMARK 3 T11: 0.2163 T22: 0.2105 REMARK 3 T33: 0.1817 T12: -0.0214 REMARK 3 T13: 0.0122 T23: 0.0284 REMARK 3 L TENSOR REMARK 3 L11: 1.5425 L22: 2.7453 REMARK 3 L33: 2.0605 L12: 0.2118 REMARK 3 L13: 0.3052 L23: 0.5403 REMARK 3 S TENSOR REMARK 3 S11: 0.0577 S12: -0.1094 S13: -0.0756 REMARK 3 S21: 0.1241 S22: -0.0229 S23: 0.0487 REMARK 3 S31: 0.0926 S32: -0.1525 S33: -0.0116 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 38 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.4642 0.9605 -2.2603 REMARK 3 T TENSOR REMARK 3 T11: 0.1623 T22: 0.1681 REMARK 3 T33: 0.1988 T12: -0.0305 REMARK 3 T13: -0.0157 T23: -0.0203 REMARK 3 L TENSOR REMARK 3 L11: 1.8060 L22: 1.1393 REMARK 3 L33: 3.7801 L12: -0.5469 REMARK 3 L13: 0.0845 L23: -0.9456 REMARK 3 S TENSOR REMARK 3 S11: 0.0417 S12: -0.0262 S13: -0.0064 REMARK 3 S21: 0.0093 S22: 0.0680 S23: 0.1628 REMARK 3 S31: -0.1256 S32: -0.3611 S33: -0.1422 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.8327 6.7233 -23.9203 REMARK 3 T TENSOR REMARK 3 T11: 0.2691 T22: 0.1669 REMARK 3 T33: 0.1392 T12: -0.0031 REMARK 3 T13: 0.0003 T23: -0.0087 REMARK 3 L TENSOR REMARK 3 L11: 8.5148 L22: 3.8465 REMARK 3 L33: 3.2615 L12: 0.7588 REMARK 3 L13: -2.6617 L23: 0.1301 REMARK 3 S TENSOR REMARK 3 S11: 0.2612 S12: 0.2676 S13: 0.1415 REMARK 3 S21: -0.1960 S22: -0.1291 S23: 0.0347 REMARK 3 S31: -0.2606 S32: -0.0408 S33: -0.1249 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 83 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.2417 10.2903 -13.9128 REMARK 3 T TENSOR REMARK 3 T11: 0.1907 T22: 0.1635 REMARK 3 T33: 0.1668 T12: -0.0050 REMARK 3 T13: 0.0181 T23: 0.0193 REMARK 3 L TENSOR REMARK 3 L11: 1.1194 L22: 0.9537 REMARK 3 L33: 2.1339 L12: 0.8442 REMARK 3 L13: 0.7419 L23: 0.5356 REMARK 3 S TENSOR REMARK 3 S11: -0.0903 S12: 0.1522 S13: 0.0686 REMARK 3 S21: -0.1217 S22: 0.1386 S23: -0.0661 REMARK 3 S31: -0.2008 S32: 0.0864 S33: -0.0446 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4739 9.5168 2.5286 REMARK 3 T TENSOR REMARK 3 T11: 0.1810 T22: 0.1528 REMARK 3 T33: 0.1875 T12: -0.0084 REMARK 3 T13: 0.0133 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 1.0746 L22: 1.3690 REMARK 3 L33: 5.3323 L12: -1.0822 REMARK 3 L13: 1.8146 L23: -1.9755 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: -0.0471 S13: 0.0284 REMARK 3 S21: -0.0102 S22: -0.0087 S23: 0.0434 REMARK 3 S31: -0.1575 S32: -0.0908 S33: 0.0598 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 164 THROUGH 182 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4971 10.3134 9.5039 REMARK 3 T TENSOR REMARK 3 T11: 0.2181 T22: 0.1947 REMARK 3 T33: 0.1950 T12: -0.0181 REMARK 3 T13: 0.0125 T23: -0.0159 REMARK 3 L TENSOR REMARK 3 L11: 0.7456 L22: 2.9042 REMARK 3 L33: 3.2984 L12: 0.1127 REMARK 3 L13: 0.0690 L23: -3.0496 REMARK 3 S TENSOR REMARK 3 S11: 0.0361 S12: -0.0159 S13: 0.1028 REMARK 3 S21: 0.2660 S22: 0.0186 S23: -0.0447 REMARK 3 S31: -0.5630 S32: 0.2090 S33: -0.0520 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 286 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.6960 -8.7308 -4.0594 REMARK 3 T TENSOR REMARK 3 T11: 0.1733 T22: 0.1574 REMARK 3 T33: 0.1625 T12: 0.0059 REMARK 3 T13: 0.0120 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 1.0294 L22: 0.8340 REMARK 3 L33: 1.9562 L12: 0.0346 REMARK 3 L13: 0.7354 L23: 0.1867 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: -0.0003 S13: -0.1035 REMARK 3 S21: -0.0032 S22: -0.0116 S23: 0.0165 REMARK 3 S31: 0.1955 S32: 0.0486 S33: -0.0449 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 287 THROUGH 312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.6873 1.5593 10.5822 REMARK 3 T TENSOR REMARK 3 T11: 0.2747 T22: 0.3798 REMARK 3 T33: 0.2043 T12: 0.0085 REMARK 3 T13: -0.0187 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 2.6045 L22: 2.7413 REMARK 3 L33: 6.3321 L12: 0.1024 REMARK 3 L13: -0.2667 L23: -2.5381 REMARK 3 S TENSOR REMARK 3 S11: 0.1125 S12: -0.3948 S13: -0.1070 REMARK 3 S21: 0.2179 S22: -0.3244 S23: -0.3122 REMARK 3 S31: 0.3233 S32: 1.0538 S33: 0.2463 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 313 THROUGH 331 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7134 -1.1563 -8.3359 REMARK 3 T TENSOR REMARK 3 T11: 0.2782 T22: 0.3012 REMARK 3 T33: 0.2425 T12: 0.0295 REMARK 3 T13: 0.0266 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.3879 L22: 5.4916 REMARK 3 L33: 8.8096 L12: 0.8396 REMARK 3 L13: 2.4450 L23: 4.7820 REMARK 3 S TENSOR REMARK 3 S11: -0.1315 S12: 0.1261 S13: -0.2084 REMARK 3 S21: -0.3888 S22: 0.3071 S23: -0.1092 REMARK 3 S31: 0.1748 S32: 0.4579 S33: -0.1708 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BBB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292125956. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.7.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44249 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 41.760 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 13.30 REMARK 200 R MERGE (I) : 0.21700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 3.41500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6ZAE REMARK 200 REMARK 200 REMARK: NEEDLE MORPHOLOGY, 4 UM X 4 UM X 220 UM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.7 M LI2SO4, 0.1 M TRIS PH 8.3, BATCH REMARK 280 MODE, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.65000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.50500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.12500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.50500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.65000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.12500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 11 CE NZ REMARK 470 ARG A 53 NE CZ NH1 NH2 REMARK 470 LYS A 59 CE NZ REMARK 470 LYS A 80 CD CE NZ REMARK 470 LYS A 120 CD CE NZ REMARK 470 LYS A 134 CD CE NZ REMARK 470 ARG A 173 CZ NH1 NH2 REMARK 470 LYS A 201 CE NZ REMARK 470 LYS A 208 CE NZ REMARK 470 GLU A 243 CD OE1 OE2 REMARK 470 LYS A 266 CE NZ REMARK 470 ASN A 303 ND2 REMARK 470 LYS A 305 CB CG CD CE NZ REMARK 470 GLN A 318 NE2 REMARK 470 LYS A 327 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 307 O HOH A 501 2.07 REMARK 500 OG1 THR A 331 O HOH A 502 2.13 REMARK 500 O HOH A 710 O HOH A 754 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 -109.46 -98.62 REMARK 500 HIS A 82 59.74 -109.81 REMARK 500 LYS A 97 -44.12 -135.57 REMARK 500 THR A 123 -5.99 77.59 REMARK 500 ASN A 230 -30.12 -154.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6ZAE RELATED DB: PDB REMARK 900 RELATED ID: 7ZOE RELATED DB: PDB REMARK 900 RELATED ID: 8A4G RELATED DB: PDB REMARK 900 RELATED ID: 8ALI RELATED DB: PDB REMARK 900 RELATED ID: 8ALJ RELATED DB: PDB DBREF 8BBB A 1 331 UNP P05326 IPNA_EMENI 1 331 SEQADV 8BBB ALA A 270 UNP P05326 HIS 270 ENGINEERED MUTATION SEQRES 1 A 331 MET GLY SER VAL SER LYS ALA ASN VAL PRO LYS ILE ASP SEQRES 2 A 331 VAL SER PRO LEU PHE GLY ASP ASP GLN ALA ALA LYS MET SEQRES 3 A 331 ARG VAL ALA GLN GLN ILE ASP ALA ALA SER ARG ASP THR SEQRES 4 A 331 GLY PHE PHE TYR ALA VAL ASN HIS GLY ILE ASN VAL GLN SEQRES 5 A 331 ARG LEU SER GLN LYS THR LYS GLU PHE HIS MET SER ILE SEQRES 6 A 331 THR PRO GLU GLU LYS TRP ASP LEU ALA ILE ARG ALA TYR SEQRES 7 A 331 ASN LYS GLU HIS GLN ASP GLN VAL ARG ALA GLY TYR TYR SEQRES 8 A 331 LEU SER ILE PRO GLY LYS LYS ALA VAL GLU SER PHE CYS SEQRES 9 A 331 TYR LEU ASN PRO ASN PHE THR PRO ASP HIS PRO ARG ILE SEQRES 10 A 331 GLN ALA LYS THR PRO THR HIS GLU VAL ASN VAL TRP PRO SEQRES 11 A 331 ASP GLU THR LYS HIS PRO GLY PHE GLN ASP PHE ALA GLU SEQRES 12 A 331 GLN TYR TYR TRP ASP VAL PHE GLY LEU SER SER ALA LEU SEQRES 13 A 331 LEU LYS GLY TYR ALA LEU ALA LEU GLY LYS GLU GLU ASN SEQRES 14 A 331 PHE PHE ALA ARG HIS PHE LYS PRO ASP ASP THR LEU ALA SEQRES 15 A 331 SER VAL VAL LEU ILE ARG TYR PRO TYR LEU ASP PRO TYR SEQRES 16 A 331 PRO GLU ALA ALA ILE LYS THR ALA ALA ASP GLY THR LYS SEQRES 17 A 331 LEU SER PHE GLU TRP HIS GLU ASP VAL SER LEU ILE THR SEQRES 18 A 331 VAL LEU TYR GLN SER ASN VAL GLN ASN LEU GLN VAL GLU SEQRES 19 A 331 THR ALA ALA GLY TYR GLN ASP ILE GLU ALA ASP ASP THR SEQRES 20 A 331 GLY TYR LEU ILE ASN CYS GLY SER TYR MET ALA HIS LEU SEQRES 21 A 331 THR ASN ASN TYR TYR LYS ALA PRO ILE ALA ARG VAL LYS SEQRES 22 A 331 TRP VAL ASN ALA GLU ARG GLN SER LEU PRO PHE PHE VAL SEQRES 23 A 331 ASN LEU GLY TYR ASP SER VAL ILE ASP PRO PHE ASP PRO SEQRES 24 A 331 ARG GLU PRO ASN GLY LYS SER ASP ARG GLU PRO LEU SER SEQRES 25 A 331 TYR GLY ASP TYR LEU GLN ASN GLY LEU VAL SER LEU ILE SEQRES 26 A 331 ASN LYS ASN GLY GLN THR HET SO4 A 401 5 HET SO4 A 402 5 HET SO4 A 403 5 HET ACV A 404 24 HETNAM SO4 SULFATE ION HETNAM ACV L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE FORMUL 2 SO4 3(O4 S 2-) FORMUL 5 ACV C14 H25 N3 O6 S FORMUL 6 HOH *392(H2 O) HELIX 1 AA1 SER A 15 GLY A 19 5 5 HELIX 2 AA2 ASP A 21 ASP A 38 1 18 HELIX 3 AA3 ASN A 50 ILE A 65 1 16 HELIX 4 AA4 THR A 66 ALA A 74 1 9 HELIX 5 AA5 HIS A 114 ALA A 119 1 6 HELIX 6 AA6 GLY A 137 LEU A 164 1 28 HELIX 7 AA7 PHE A 171 PHE A 175 5 5 HELIX 8 AA8 PRO A 196 ILE A 200 5 5 HELIX 9 AA9 GLY A 254 THR A 261 1 8 HELIX 10 AB1 SER A 312 GLY A 329 1 18 SHEET 1 AA1 6 SER A 5 LYS A 6 0 SHEET 2 AA1 6 GLY A 238 ASP A 241 1 O ASP A 241 N SER A 5 SHEET 3 AA1 6 LEU A 231 THR A 235 -1 N VAL A 233 O GLN A 240 SHEET 4 AA1 6 ALA A 270 LYS A 273 -1 O ARG A 271 N GLN A 232 SHEET 5 AA1 6 LYS A 208 HIS A 214 -1 N SER A 210 O VAL A 272 SHEET 6 AA1 6 LYS A 201 THR A 202 -1 N LYS A 201 O LEU A 209 SHEET 1 AA2 8 LYS A 11 ASP A 13 0 SHEET 2 AA2 8 PHE A 41 VAL A 45 1 O TYR A 43 N ILE A 12 SHEET 3 AA2 8 TYR A 249 CYS A 253 -1 O ILE A 251 N PHE A 42 SHEET 4 AA2 8 ILE A 220 GLN A 225 -1 N LEU A 223 O LEU A 250 SHEET 5 AA2 8 ARG A 279 VAL A 286 -1 O LEU A 282 N TYR A 224 SHEET 6 AA2 8 SER A 183 TYR A 189 -1 N SER A 183 O PHE A 285 SHEET 7 AA2 8 GLU A 101 TYR A 105 -1 N GLU A 101 O ARG A 188 SHEET 8 AA2 8 GLY A 89 TYR A 91 -1 N TYR A 91 O SER A 102 CISPEP 1 ASP A 193 PRO A 194 0 0.85 CRYST1 41.300 74.250 101.010 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024213 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009900 0.00000