HEADER OXIDOREDUCTASE 14-OCT-22 8BBS
TITLE STRUCTURE OF AKR1C3 IN COMPLEX WITH A BILE ACID FUSED TETRAZOLE
TITLE 2 INHIBITOR
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: ALDO-KETO REDUCTASE FAMILY 1 MEMBER C3;
COMPND 3 CHAIN: B, A;
COMPND 4 SYNONYM: 17-BETA-HYDROXYSTEROID DEHYDROGENASE TYPE 5,17-BETA-HSD 5,3-
COMPND 5 ALPHA-HSD TYPE II,BRAIN,3-ALPHA-HYDROXYSTEROID DEHYDROGENASE TYPE 2,
COMPND 6 3-ALPHA-HSD TYPE 2,CHLORDECONE REDUCTASE HOMOLOG HAKRB,DIHYDRODIOL
COMPND 7 DEHYDROGENASE 3,DD-3,DD3,DIHYDRODIOL DEHYDROGENASE TYPE I,HA1753,
COMPND 8 PROSTAGLANDIN F SYNTHASE,PGFS,TESTOSTERONE 17-BETA-DEHYDROGENASE 5;
COMPND 9 EC: 1.1.1.-,1.1.1.210,1.1.1.53,1.1.1.62,1.1.1.357,1.1.1.188,
COMPND 10 1.1.1.239,1.1.1.64;
COMPND 11 ENGINEERED: YES;
COMPND 12 OTHER_DETAILS: THE N-TERMINAL SEQUENCE GSH IS A CLONING ARTEFACT
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: AKR1C3, DDH1, HSD17B5, KIAA0119, PGFS;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28B(+)
KEYWDS AKR1C3, ALDO-KETO REDUCTASE, STEROID METABOLISM, BILE ACID,
KEYWDS 2 TETRAZOLE, CANCER, OXIDOREDUCTASE
EXPDTA X-RAY DIFFRACTION
AUTHOR E.T.PETRI,J.SKERLOVA,M.MARINOVIC,J.BRYNDA,M.KUGLER,D.SKORIC,S.BEKIC,
AUTHOR 2 A.S.CELIC,P.REZACOVA
REVDAT 3 07-FEB-24 8BBS 1 REMARK
REVDAT 2 24-MAY-23 8BBS 1 FORMUL
REVDAT 1 08-MAR-23 8BBS 0
JRNL AUTH M.A.MARINOVIC,S.S.BEKIC,M.KUGLER,J.BRYNDA,J.SKERLOVA,
JRNL AUTH 2 D.D.SKORIC,P.REZACOVA,E.T.PETRI,A.S.CELIC
JRNL TITL X-RAY STRUCTURE OF HUMAN ALDO-KETO REDUCTASE 1C3 IN COMPLEX
JRNL TITL 2 WITH A BILE ACID FUSED TETRAZOLE INHIBITOR: EXPERIMENTAL
JRNL TITL 3 VALIDATION, MOLECULAR DOCKING AND STRUCTURAL ANALYSIS.
JRNL REF RSC MED CHEM V. 14 341 2023
JRNL REFN ESSN 2632-8682
JRNL PMID 36846371
JRNL DOI 10.1039/D2MD00387B
REMARK 2
REMARK 2 RESOLUTION. 1.40 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.8.0232
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.93
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 93.1
REMARK 3 NUMBER OF REFLECTIONS : 105499
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.155
REMARK 3 R VALUE (WORKING SET) : 0.155
REMARK 3 FREE R VALUE : 0.178
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.400
REMARK 3 FREE R VALUE TEST SET COUNT : 1533
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.44
REMARK 3 REFLECTION IN BIN (WORKING SET) : 7795
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.06
REMARK 3 BIN R VALUE (WORKING SET) : 0.2670
REMARK 3 BIN FREE R VALUE SET COUNT : 113
REMARK 3 BIN FREE R VALUE : 0.2580
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5072
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 167
REMARK 3 SOLVENT ATOMS : 727
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 21.72
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.31
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.00000
REMARK 3 B22 (A**2) : 0.02000
REMARK 3 B33 (A**2) : -0.02000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.01000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.062
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.976
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.971
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5667 ; 0.011 ; 0.013
REMARK 3 BOND LENGTHS OTHERS (A): 5258 ; 0.034 ; 0.017
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7740 ; 1.743 ; 1.690
REMARK 3 BOND ANGLES OTHERS (DEGREES): 12278 ; 2.252 ; 1.619
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 692 ; 6.003 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 304 ;34.746 ;22.072
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1001 ;12.705 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 41 ;18.272 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 718 ; 0.092 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6332 ; 0.010 ; 0.020
REMARK 3 GENERAL PLANES OTHERS (A): 1195 ; 0.015 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : NULL
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY
REMARK 4
REMARK 4 8BBS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-OCT-22.
REMARK 100 THE DEPOSITION ID IS D_1292126086.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 26-SEP-19
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 8.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : BESSY
REMARK 200 BEAMLINE : 14.1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9184
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 107028
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400
REMARK 200 RESOLUTION RANGE LOW (A) : 45.930
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 93.1
REMARK 200 DATA REDUNDANCY : 3.582
REMARK 200 R MERGE (I) : 0.05800
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.4900
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48
REMARK 200 COMPLETENESS FOR SHELL (%) : 92.7
REMARK 200 DATA REDUNDANCY IN SHELL : 3.64
REMARK 200 R MERGE FOR SHELL (I) : 0.58200
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.130
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 1ZQ5
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 39.23
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 12.5% W/V PEG 1000, 12.5% W/V PEG
REMARK 280 3350, 12.5% V/V MPD AND 0.02 M EACH OF DL-GLUTAMIC ACID
REMARK 280 MONOHYDRATE, DL-ALANINE, GLYCINE, DL-LYSINE MONOHYDROCHLORIDE,
REMARK 280 AND DL-SERINE; IN 0.1 M BICINE/TRIZMA BASE, PH 8.5, VAPOR
REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 295K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY B -2
REMARK 465 SER B -1
REMARK 465 HIS B 0
REMARK 465 MET B 1
REMARK 465 ASP B 2
REMARK 465 SER B 3
REMARK 465 LYS B 4
REMARK 465 HIS B 5
REMARK 465 SER B 320
REMARK 465 ASP B 321
REMARK 465 GLU B 322
REMARK 465 TYR B 323
REMARK 465 GLY A -2
REMARK 465 SER A -1
REMARK 465 HIS A 0
REMARK 465 MET A 1
REMARK 465 ASP A 2
REMARK 465 SER A 3
REMARK 465 LYS A 4
REMARK 465 HIS A 5
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASN B 57 -0.82 -142.08
REMARK 500 SER B 221 165.81 76.89
REMARK 500 ARG B 250 -154.91 -123.68
REMARK 500 ARG B 301 23.34 -144.50
REMARK 500 SER B 308 48.14 35.73
REMARK 500 SER B 313 -1.29 87.68
REMARK 500 ALA A 52 148.54 -172.34
REMARK 500 PHE A 197 79.89 -150.79
REMARK 500 SER A 221 166.79 78.18
REMARK 500 ARG A 250 -150.00 -118.93
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH B 875 DISTANCE = 5.92 ANGSTROMS
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA B 405 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU B 127 OE2
REMARK 620 2 SER B 208 O 137.1
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA B 406 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU B 174 OE1
REMARK 620 2 HOH B 599 O 108.2
REMARK 620 3 HOH B 790 O 73.3 100.9
REMARK 620 4 HOH A 687 O 144.6 99.6 122.9
REMARK 620 N 1 2 3
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA B 403 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP B 204 OD1
REMARK 620 2 HOH B 756 O 145.7
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA B 404 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU B 285 OE2
REMARK 620 2 HOH B 523 O 116.4
REMARK 620 3 HOH B 835 O 103.3 126.6
REMARK 620 N 1 2
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 406 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 100 OE1
REMARK 620 2 HOH A 625 O 103.8
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 404 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 126 OE1
REMARK 620 2 HOH A 553 O 83.8
REMARK 620 3 HOH A 758 O 85.4 126.6
REMARK 620 N 1 2
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 405 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A 204 OD2
REMARK 620 2 HOH A 665 O 124.7
REMARK 620 N 1
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 NA A 407 NA
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 GLU A 237 OE1
REMARK 620 2 HOH A 645 O 118.1
REMARK 620 3 HOH A 695 O 101.2 115.6
REMARK 620 N 1 2
DBREF 8BBS B 1 323 UNP P42330 AK1C3_HUMAN 1 323
DBREF 8BBS A 1 323 UNP P42330 AK1C3_HUMAN 1 323
SEQADV 8BBS GLY B -2 UNP P42330 EXPRESSION TAG
SEQADV 8BBS SER B -1 UNP P42330 EXPRESSION TAG
SEQADV 8BBS HIS B 0 UNP P42330 EXPRESSION TAG
SEQADV 8BBS GLY A -2 UNP P42330 EXPRESSION TAG
SEQADV 8BBS SER A -1 UNP P42330 EXPRESSION TAG
SEQADV 8BBS HIS A 0 UNP P42330 EXPRESSION TAG
SEQRES 1 B 326 GLY SER HIS MET ASP SER LYS HIS GLN CYS VAL LYS LEU
SEQRES 2 B 326 ASN ASP GLY HIS PHE MET PRO VAL LEU GLY PHE GLY THR
SEQRES 3 B 326 TYR ALA PRO PRO GLU VAL PRO ARG SER LYS ALA LEU GLU
SEQRES 4 B 326 VAL THR LYS LEU ALA ILE GLU ALA GLY PHE ARG HIS ILE
SEQRES 5 B 326 ASP SER ALA HIS LEU TYR ASN ASN GLU GLU GLN VAL GLY
SEQRES 6 B 326 LEU ALA ILE ARG SER LYS ILE ALA ASP GLY SER VAL LYS
SEQRES 7 B 326 ARG GLU ASP ILE PHE TYR THR SER LYS LEU TRP SER THR
SEQRES 8 B 326 PHE HIS ARG PRO GLU LEU VAL ARG PRO ALA LEU GLU ASN
SEQRES 9 B 326 SER LEU LYS LYS ALA GLN LEU ASP TYR VAL ASP LEU TYR
SEQRES 10 B 326 LEU ILE HIS SER PRO MET SER LEU LYS PRO GLY GLU GLU
SEQRES 11 B 326 LEU SER PRO THR ASP GLU ASN GLY LYS VAL ILE PHE ASP
SEQRES 12 B 326 ILE VAL ASP LEU CYS THR THR TRP GLU ALA MET GLU LYS
SEQRES 13 B 326 CYS LYS ASP ALA GLY LEU ALA LYS SER ILE GLY VAL SER
SEQRES 14 B 326 ASN PHE ASN ARG ARG GLN LEU GLU MET ILE LEU ASN LYS
SEQRES 15 B 326 PRO GLY LEU LYS TYR LYS PRO VAL CYS ASN GLN VAL GLU
SEQRES 16 B 326 CYS HIS PRO TYR PHE ASN ARG SER LYS LEU LEU ASP PHE
SEQRES 17 B 326 CYS LYS SER LYS ASP ILE VAL LEU VAL ALA TYR SER ALA
SEQRES 18 B 326 LEU GLY SER GLN ARG ASP LYS ARG TRP VAL ASP PRO ASN
SEQRES 19 B 326 SER PRO VAL LEU LEU GLU ASP PRO VAL LEU CYS ALA LEU
SEQRES 20 B 326 ALA LYS LYS HIS LYS ARG THR PRO ALA LEU ILE ALA LEU
SEQRES 21 B 326 ARG TYR GLN LEU GLN ARG GLY VAL VAL VAL LEU ALA LYS
SEQRES 22 B 326 SER TYR ASN GLU GLN ARG ILE ARG GLN ASN VAL GLN VAL
SEQRES 23 B 326 PHE GLU PHE GLN LEU THR ALA GLU ASP MET LYS ALA ILE
SEQRES 24 B 326 ASP GLY LEU ASP ARG ASN LEU HIS TYR PHE ASN SER ASP
SEQRES 25 B 326 SER PHE ALA SER HIS PRO ASN TYR PRO TYR SER ASP GLU
SEQRES 26 B 326 TYR
SEQRES 1 A 326 GLY SER HIS MET ASP SER LYS HIS GLN CYS VAL LYS LEU
SEQRES 2 A 326 ASN ASP GLY HIS PHE MET PRO VAL LEU GLY PHE GLY THR
SEQRES 3 A 326 TYR ALA PRO PRO GLU VAL PRO ARG SER LYS ALA LEU GLU
SEQRES 4 A 326 VAL THR LYS LEU ALA ILE GLU ALA GLY PHE ARG HIS ILE
SEQRES 5 A 326 ASP SER ALA HIS LEU TYR ASN ASN GLU GLU GLN VAL GLY
SEQRES 6 A 326 LEU ALA ILE ARG SER LYS ILE ALA ASP GLY SER VAL LYS
SEQRES 7 A 326 ARG GLU ASP ILE PHE TYR THR SER LYS LEU TRP SER THR
SEQRES 8 A 326 PHE HIS ARG PRO GLU LEU VAL ARG PRO ALA LEU GLU ASN
SEQRES 9 A 326 SER LEU LYS LYS ALA GLN LEU ASP TYR VAL ASP LEU TYR
SEQRES 10 A 326 LEU ILE HIS SER PRO MET SER LEU LYS PRO GLY GLU GLU
SEQRES 11 A 326 LEU SER PRO THR ASP GLU ASN GLY LYS VAL ILE PHE ASP
SEQRES 12 A 326 ILE VAL ASP LEU CYS THR THR TRP GLU ALA MET GLU LYS
SEQRES 13 A 326 CYS LYS ASP ALA GLY LEU ALA LYS SER ILE GLY VAL SER
SEQRES 14 A 326 ASN PHE ASN ARG ARG GLN LEU GLU MET ILE LEU ASN LYS
SEQRES 15 A 326 PRO GLY LEU LYS TYR LYS PRO VAL CYS ASN GLN VAL GLU
SEQRES 16 A 326 CYS HIS PRO TYR PHE ASN ARG SER LYS LEU LEU ASP PHE
SEQRES 17 A 326 CYS LYS SER LYS ASP ILE VAL LEU VAL ALA TYR SER ALA
SEQRES 18 A 326 LEU GLY SER GLN ARG ASP LYS ARG TRP VAL ASP PRO ASN
SEQRES 19 A 326 SER PRO VAL LEU LEU GLU ASP PRO VAL LEU CYS ALA LEU
SEQRES 20 A 326 ALA LYS LYS HIS LYS ARG THR PRO ALA LEU ILE ALA LEU
SEQRES 21 A 326 ARG TYR GLN LEU GLN ARG GLY VAL VAL VAL LEU ALA LYS
SEQRES 22 A 326 SER TYR ASN GLU GLN ARG ILE ARG GLN ASN VAL GLN VAL
SEQRES 23 A 326 PHE GLU PHE GLN LEU THR ALA GLU ASP MET LYS ALA ILE
SEQRES 24 A 326 ASP GLY LEU ASP ARG ASN LEU HIS TYR PHE ASN SER ASP
SEQRES 25 A 326 SER PHE ALA SER HIS PRO ASN TYR PRO TYR SER ASP GLU
SEQRES 26 A 326 TYR
HET NAP B 401 48
HET QBO B 402 31
HET NA B 403 1
HET NA B 404 1
HET NA B 405 1
HET NA B 406 1
HET NAP A 401 48
HET QBO A 402 31
HET NA A 403 1
HET NA A 404 1
HET NA A 405 1
HET NA A 406 1
HET NA A 407 1
HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
HETNAM QBO (4~{R})-4-[(1~{R},2~{S},5~{R},6~{R},13~{S},14~{S},
HETNAM 2 QBO 17~{R},19~{R})-6,14-DIMETHYL-17-OXIDANYL-7,8,9,10-
HETNAM 3 QBO TETRAZAPENTACYCLO[11.8.0.0^{2,6}.0^{7,11}.0^{14,
HETNAM 4 QBO 19}]HENICOSA-8,10-DIEN-5-YL]PENTANOIC ACID
HETNAM NA SODIUM ION
HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
FORMUL 3 NAP 2(C21 H28 N7 O17 P3)
FORMUL 4 QBO 2(C24 H38 N4 O3)
FORMUL 5 NA 9(NA 1+)
FORMUL 16 HOH *727(H2 O)
HELIX 1 AA1 ARG B 31 GLY B 45 1 15
HELIX 2 AA2 ALA B 52 ASN B 56 5 5
HELIX 3 AA3 ASN B 57 ASP B 71 1 15
HELIX 4 AA4 LYS B 75 ILE B 79 5 5
HELIX 5 AA5 TRP B 86 HIS B 90 5 5
HELIX 6 AA6 ARG B 91 GLN B 107 1 17
HELIX 7 AA7 ASP B 143 ALA B 157 1 15
HELIX 8 AA8 ASN B 169 ASN B 178 1 10
HELIX 9 AA9 ARG B 199 LYS B 209 1 11
HELIX 10 AB1 VAL B 234 GLU B 237 5 4
HELIX 11 AB2 ASP B 238 LYS B 249 1 12
HELIX 12 AB3 THR B 251 ARG B 263 1 13
HELIX 13 AB4 ASN B 273 VAL B 281 1 9
HELIX 14 AB5 GLN B 282 PHE B 286 5 5
HELIX 15 AB6 THR B 289 GLY B 298 1 10
HELIX 16 AB7 SER B 308 ALA B 312 5 5
HELIX 17 AB8 ARG A 31 GLY A 45 1 15
HELIX 18 AB9 ALA A 52 ASN A 56 5 5
HELIX 19 AC1 ASN A 57 ASP A 71 1 15
HELIX 20 AC2 LYS A 75 ILE A 79 5 5
HELIX 21 AC3 TRP A 86 HIS A 90 5 5
HELIX 22 AC4 ARG A 91 GLN A 107 1 17
HELIX 23 AC5 ASP A 143 ALA A 157 1 15
HELIX 24 AC6 ASN A 169 ASN A 178 1 10
HELIX 25 AC7 ARG A 199 LYS A 209 1 11
HELIX 26 AC8 VAL A 234 GLU A 237 5 4
HELIX 27 AC9 ASP A 238 LYS A 249 1 12
HELIX 28 AD1 THR A 251 ARG A 263 1 13
HELIX 29 AD2 ASN A 273 VAL A 281 1 9
HELIX 30 AD3 GLN A 282 PHE A 286 5 5
HELIX 31 AD4 THR A 289 GLY A 298 1 10
HELIX 32 AD5 SER A 308 ALA A 312 5 5
SHEET 1 AA1 2 CYS B 7 LYS B 9 0
SHEET 2 AA1 2 PHE B 15 PRO B 17 -1 O MET B 16 N VAL B 8
SHEET 1 AA2 9 LEU B 19 GLY B 22 0
SHEET 2 AA2 9 HIS B 48 ASP B 50 1 O HIS B 48 N PHE B 21
SHEET 3 AA2 9 PHE B 80 LEU B 85 1 O PHE B 80 N ILE B 49
SHEET 4 AA2 9 VAL B 111 ILE B 116 1 O LEU B 115 N LEU B 85
SHEET 5 AA2 9 ALA B 160 SER B 166 1 O LYS B 161 N VAL B 111
SHEET 6 AA2 9 CYS B 188 GLU B 192 1 O CYS B 188 N VAL B 165
SHEET 7 AA2 9 VAL B 212 TYR B 216 1 O VAL B 214 N VAL B 191
SHEET 8 AA2 9 VAL B 266 LYS B 270 1 O VAL B 266 N ALA B 215
SHEET 9 AA2 9 LEU B 19 GLY B 22 1 N GLY B 20 O VAL B 267
SHEET 1 AA3 2 CYS A 7 LYS A 9 0
SHEET 2 AA3 2 PHE A 15 PRO A 17 -1 O MET A 16 N VAL A 8
SHEET 1 AA4 9 LEU A 19 GLY A 22 0
SHEET 2 AA4 9 HIS A 48 ASP A 50 1 O ASP A 50 N PHE A 21
SHEET 3 AA4 9 PHE A 80 LEU A 85 1 O PHE A 80 N ILE A 49
SHEET 4 AA4 9 VAL A 111 ILE A 116 1 O LEU A 115 N LEU A 85
SHEET 5 AA4 9 ALA A 160 SER A 166 1 O LYS A 161 N VAL A 111
SHEET 6 AA4 9 CYS A 188 GLU A 192 1 O CYS A 188 N VAL A 165
SHEET 7 AA4 9 VAL A 212 TYR A 216 1 O VAL A 214 N VAL A 191
SHEET 8 AA4 9 VAL A 266 LYS A 270 1 O VAL A 266 N ALA A 215
SHEET 9 AA4 9 LEU A 19 GLY A 22 1 N GLY A 20 O VAL A 267
LINK OE2 GLU B 127 NA NA B 405 1555 1555 2.35
LINK OE1 GLU B 174 NA NA B 406 1555 1555 2.55
LINK OD1AASP B 204 NA NA B 403 1555 1555 2.33
LINK O SER B 208 NA NA B 405 1555 1455 2.71
LINK OE2 GLU B 285 NA NA B 404 1555 1555 2.43
LINK NA NA B 403 O HOH B 756 1555 1455 2.65
LINK NA NA B 404 O HOH B 523 1555 1555 2.67
LINK NA NA B 404 O HOH B 835 1555 1555 2.75
LINK NA NA B 406 O HOH B 599 1555 1555 2.67
LINK NA NA B 406 O HOH B 790 1555 1555 2.76
LINK NA NA B 406 O HOH A 687 1555 1545 2.91
LINK OE1 GLU A 100 NA NA A 406 1555 1555 2.44
LINK OE1 GLU A 126 NA NA A 404 1555 1555 2.17
LINK OD2 ASP A 204 NA NA A 405 1555 1555 2.60
LINK OD2 ASP A 210 NA NA A 403 1555 1555 2.40
LINK OE1 GLU A 237 NA NA A 407 1555 1555 2.53
LINK NA NA A 404 O HOH A 553 1555 1555 2.49
LINK NA NA A 404 O HOH A 758 1555 1555 2.51
LINK NA NA A 405 O HOH A 665 1555 1555 3.03
LINK NA NA A 406 O HOH A 625 1555 1555 2.54
LINK NA NA A 407 O HOH A 645 1555 1555 3.11
LINK NA NA A 407 O HOH A 695 1555 1555 2.77
CRYST1 39.462 51.413 77.879 77.26 86.74 77.63 P 1 2
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.025341 -0.005558 -0.000260 0.00000
SCALE2 0.000000 0.019913 -0.004356 0.00000
SCALE3 0.000000 0.000000 0.013165 0.00000