HEADER IMMUNE SYSTEM 23-OCT-22 8BF0 TITLE STRUCTURE OF A FAB PORTION FROM TKH2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTI-DECTIN-1 15E2 LIGHT CHAIN; COMPND 3 CHAIN: L; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: ANTI-LOX-1 15C4 HEAVY CHAIN; COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ANTIBODY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.DISKIN,A.BORENSTEIN-KATZ REVDAT 1 01-NOV-23 8BF0 0 JRNL AUTH R.DISKIN,A.BORENSTEIN-KATZ JRNL TITL STRUCTURE OF A FAB PORTION FROM TKH2 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 39229 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 2006 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.2700 - 4.2200 0.99 2723 144 0.1476 0.1737 REMARK 3 2 4.2200 - 3.3500 0.99 2678 143 0.1414 0.1782 REMARK 3 3 3.3500 - 2.9200 1.00 2677 140 0.1692 0.1860 REMARK 3 4 2.9200 - 2.6600 1.00 2659 146 0.1722 0.2163 REMARK 3 5 2.6600 - 2.4700 1.00 2636 139 0.1738 0.2076 REMARK 3 6 2.4700 - 2.3200 1.00 2685 143 0.1767 0.1952 REMARK 3 7 2.3200 - 2.2000 0.99 2622 146 0.1773 0.2300 REMARK 3 8 2.2000 - 2.1100 1.00 2653 149 0.1703 0.2256 REMARK 3 9 2.1100 - 2.0300 1.00 2665 139 0.1781 0.2415 REMARK 3 10 2.0300 - 1.9600 1.00 2650 144 0.1894 0.1987 REMARK 3 11 1.9600 - 1.9000 1.00 2623 144 0.2146 0.3117 REMARK 3 12 1.9000 - 1.8400 0.99 2650 140 0.2383 0.2863 REMARK 3 13 1.8400 - 1.7900 0.99 2656 141 0.2447 0.2485 REMARK 3 14 1.7900 - 1.7500 1.00 2646 148 0.2842 0.3202 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.189 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.539 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3331 REMARK 3 ANGLE : 0.881 4542 REMARK 3 CHIRALITY : 0.059 516 REMARK 3 PLANARITY : 0.007 576 REMARK 3 DIHEDRAL : 11.920 472 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 88 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.3653 6.3325 -39.7597 REMARK 3 T TENSOR REMARK 3 T11: 0.2732 T22: 0.4793 REMARK 3 T33: 0.2154 T12: 0.0102 REMARK 3 T13: 0.0019 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 3.5772 L22: 0.7834 REMARK 3 L33: 1.3682 L12: -0.4046 REMARK 3 L13: -0.0431 L23: 0.0739 REMARK 3 S TENSOR REMARK 3 S11: 0.1201 S12: 0.7346 S13: -0.0742 REMARK 3 S21: -0.1777 S22: -0.0698 S23: -0.0130 REMARK 3 S31: 0.0325 S32: -0.0939 S33: -0.0263 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 89 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.9424 5.5560 -13.2204 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.1494 REMARK 3 T33: 0.2217 T12: -0.0080 REMARK 3 T13: 0.0194 T23: 0.0107 REMARK 3 L TENSOR REMARK 3 L11: 1.2186 L22: 0.4094 REMARK 3 L33: 1.4869 L12: -0.0235 REMARK 3 L13: 0.5870 L23: -0.1432 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: 0.0022 S13: -0.1079 REMARK 3 S21: -0.0088 S22: 0.0244 S23: -0.0089 REMARK 3 S31: -0.0379 S32: -0.0130 S33: -0.0313 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 163 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8030 6.5347 -4.3730 REMARK 3 T TENSOR REMARK 3 T11: 0.2203 T22: 0.1281 REMARK 3 T33: 0.2510 T12: -0.0288 REMARK 3 T13: 0.0079 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.3426 L22: 0.4021 REMARK 3 L33: 3.6796 L12: -0.0820 REMARK 3 L13: -0.5664 L23: 0.2430 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.2073 S13: -0.1296 REMARK 3 S21: 0.0518 S22: -0.0382 S23: -0.0981 REMARK 3 S31: -0.1259 S32: 0.1870 S33: 0.0031 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): -23.1196 16.4505 -20.0124 REMARK 3 T TENSOR REMARK 3 T11: 0.3404 T22: 0.4007 REMARK 3 T33: 0.4728 T12: 0.0141 REMARK 3 T13: -0.0180 T23: -0.0573 REMARK 3 L TENSOR REMARK 3 L11: 1.3621 L22: 1.6735 REMARK 3 L33: 3.7078 L12: -0.8305 REMARK 3 L13: 0.7241 L23: -1.1353 REMARK 3 S TENSOR REMARK 3 S11: 0.0937 S12: -0.0691 S13: 0.5716 REMARK 3 S21: 0.3885 S22: -0.1306 S23: 0.1785 REMARK 3 S31: -0.5863 S32: -0.4458 S33: -0.1193 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 18 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3802 21.0182 -31.5852 REMARK 3 T TENSOR REMARK 3 T11: 0.3895 T22: 0.4788 REMARK 3 T33: 0.5528 T12: 0.1026 REMARK 3 T13: -0.0404 T23: 0.1918 REMARK 3 L TENSOR REMARK 3 L11: 1.9070 L22: 2.6040 REMARK 3 L33: 0.8124 L12: 0.6318 REMARK 3 L13: 0.9561 L23: 0.9226 REMARK 3 S TENSOR REMARK 3 S11: -0.1016 S12: 0.4952 S13: 0.7693 REMARK 3 S21: -0.2757 S22: -0.3852 S23: 0.0350 REMARK 3 S31: -0.6163 S32: -0.0890 S33: -0.0512 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 34 THROUGH 82 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.2789 10.5820 -29.3152 REMARK 3 T TENSOR REMARK 3 T11: 0.2675 T22: 0.4140 REMARK 3 T33: 0.2937 T12: 0.0191 REMARK 3 T13: -0.0288 T23: 0.0273 REMARK 3 L TENSOR REMARK 3 L11: 3.4333 L22: 0.4814 REMARK 3 L33: 2.8656 L12: -0.3118 REMARK 3 L13: 0.2836 L23: 0.4143 REMARK 3 S TENSOR REMARK 3 S11: 0.1604 S12: 0.4826 S13: -0.0591 REMARK 3 S21: -0.1357 S22: -0.0634 S23: 0.1748 REMARK 3 S31: 0.0783 S32: -0.3919 S33: -0.0646 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 83 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.0261 9.8779 -25.9332 REMARK 3 T TENSOR REMARK 3 T11: 0.2127 T22: 0.3125 REMARK 3 T33: 0.2756 T12: 0.0115 REMARK 3 T13: -0.0007 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 3.8009 L22: 2.0149 REMARK 3 L33: 3.6712 L12: -0.5208 REMARK 3 L13: 0.2684 L23: 0.0287 REMARK 3 S TENSOR REMARK 3 S11: 0.2115 S12: 0.5828 S13: -0.1583 REMARK 3 S21: -0.0679 S22: -0.1192 S23: 0.0272 REMARK 3 S31: -0.2456 S32: -0.0497 S33: -0.0102 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 98 THROUGH 131 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.3521 15.3561 -11.7490 REMARK 3 T TENSOR REMARK 3 T11: 0.2286 T22: 0.1879 REMARK 3 T33: 0.2344 T12: 0.0151 REMARK 3 T13: 0.0093 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 2.1879 L22: 0.8823 REMARK 3 L33: 2.0097 L12: 0.2543 REMARK 3 L13: 1.0262 L23: 0.2650 REMARK 3 S TENSOR REMARK 3 S11: 0.0518 S12: -0.0686 S13: 0.2555 REMARK 3 S21: 0.0394 S22: -0.0570 S23: 0.0486 REMARK 3 S31: 0.0575 S32: -0.1082 S33: 0.0168 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 132 THROUGH 185 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.0133 16.1647 -9.7739 REMARK 3 T TENSOR REMARK 3 T11: 0.2505 T22: 0.1475 REMARK 3 T33: 0.2276 T12: 0.0087 REMARK 3 T13: 0.0004 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 2.9185 L22: 0.6591 REMARK 3 L33: 1.1908 L12: 0.1178 REMARK 3 L13: 0.6383 L23: 0.2548 REMARK 3 S TENSOR REMARK 3 S11: -0.0723 S12: -0.0132 S13: 0.0713 REMARK 3 S21: -0.0529 S22: -0.0282 S23: -0.0331 REMARK 3 S31: -0.1357 S32: -0.0001 S33: 0.0304 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 186 THROUGH 212 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.4740 24.8095 -5.5946 REMARK 3 T TENSOR REMARK 3 T11: 0.2788 T22: 0.1861 REMARK 3 T33: 0.2860 T12: 0.0271 REMARK 3 T13: -0.0144 T23: -0.0590 REMARK 3 L TENSOR REMARK 3 L11: 5.6923 L22: 2.1303 REMARK 3 L33: 1.3578 L12: 2.1761 REMARK 3 L13: 0.0737 L23: -0.1486 REMARK 3 S TENSOR REMARK 3 S11: 0.0841 S12: -0.5554 S13: 0.6098 REMARK 3 S21: 0.1925 S22: -0.1897 S23: 0.1253 REMARK 3 S31: -0.1840 S32: 0.0886 S33: 0.0585 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BF0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292126238. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97242 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39241 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 44.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.08400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.60 REMARK 200 R MERGE FOR SHELL (I) : 1.11500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6XTG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350, 0.1M CITRIC ACID PH 3.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.55550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4430 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: L, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS H 126 REMARK 465 SER H 127 REMARK 465 THR H 128 REMARK 465 SER H 129 REMARK 465 CYS H 213 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS H 75 O HOH H 301 1.18 REMARK 500 H LYS H 211 O HOH H 304 1.55 REMARK 500 HZ2 LYS L 206 O HOH L 410 1.56 REMARK 500 NZ LYS H 75 O HOH H 301 1.81 REMARK 500 O HOH H 371 O HOH H 416 1.82 REMARK 500 O HOH L 486 O HOH L 537 1.88 REMARK 500 OD1 ASP L 121 O HOH L 401 1.88 REMARK 500 O HOH H 414 O HOH H 416 1.95 REMARK 500 O ALA H 122 O HOH H 302 1.99 REMARK 500 OG SER L 27 O HOH L 402 2.06 REMARK 500 OD2 ASP L 184 O HOH L 403 2.06 REMARK 500 O HOH L 476 O HOH L 532 2.07 REMARK 500 OD1 ASN L 93 O HOH L 404 2.15 REMARK 500 OG SER L 92 O HOH L 405 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS L 193 CB CYS L 193 SG -0.111 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS L 193 CA - CB - SG ANGL. DEV. = 7.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR L 50 -46.42 73.92 REMARK 500 ALA L 83 -179.31 177.33 REMARK 500 TRP L 90 45.59 -146.91 REMARK 500 LYS L 168 -60.05 -100.82 REMARK 500 ASP H 141 65.97 63.82 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BF0 L 1 213 PDB 8BF0 8BF0 1 213 DBREF 8BF0 H 1 213 PDB 8BF0 8BF0 1 213 SEQRES 1 L 213 GLN ILE VAL LEU THR GLN SER PRO ALA ILE MET SER ALA SEQRES 2 L 213 SER PRO GLY GLU LYS VAL THR MET THR CYS SER ALA SER SEQRES 3 L 213 SER SER VAL SER TYR MET HIS TRP TYR GLN GLN LYS SER SEQRES 4 L 213 GLY THR SER PRO LYS ARG TRP ILE TYR ASP THR SER LYS SEQRES 5 L 213 LEU THR SER GLY VAL PRO ALA ARG PHE SER GLY SER GLY SEQRES 6 L 213 SER GLY THR SER TYR SER LEU THR ILE SER SER MET GLU SEQRES 7 L 213 ALA GLU ASP ALA ALA THR TYR TYR CYS GLN GLN TRP SER SEQRES 8 L 213 SER ASN THR LEU THR PHE GLY ALA GLY THR LYS LEU GLU SEQRES 9 L 213 LEU LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE PHE SEQRES 10 L 213 PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SER SEQRES 11 L 213 VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU ALA SEQRES 12 L 213 LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER GLY SEQRES 13 L 213 ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS ASP SEQRES 14 L 213 SER THR TYR SER LEU SER SER THR LEU THR LEU SER LYS SEQRES 15 L 213 ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU VAL SEQRES 16 L 213 THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER PHE SEQRES 17 L 213 ASN ARG GLY GLU CYS SEQRES 1 H 216 GLU VAL GLN LEU GLN GLU SER GLY PRO GLY LEU VAL ALA SEQRES 2 H 216 PRO SER GLN SER LEU SER ILE THR CYS THR VAL SER GLY SEQRES 3 H 216 PHE SER LEU ILE SER TYR GLY VAL SER TRP VAL ARG GLN SEQRES 4 H 216 PRO PRO GLY LYS GLY LEU GLU TRP LEU GLY VAL ILE TRP SEQRES 5 H 216 GLY ASP GLY SER THR ASN TYR HIS SER THR LEU ILE SER SEQRES 6 H 216 ARG LEU SER ILE ASN LYS ASP ASN SER LYS SER GLN VAL SEQRES 7 H 216 PHE LEU LYS LEU ASN SER LEU GLN THR ASP ASP THR ALA SEQRES 8 H 216 THR TYR TYR CYS VAL GLY PRO ARG PHE ALA TYR TRP GLY SEQRES 9 H 216 GLN GLY THR LEU VAL THR VAL SER ALA ALA SER THR LYS SEQRES 10 H 216 GLY PRO SER VAL PHE PRO LEU ALA PRO SER SER LYS SER SEQRES 11 H 216 THR SER GLY GLY THR ALA ALA LEU GLY CYS LEU VAL LYS SEQRES 12 H 216 ASP TYR PHE PRO GLU PRO VAL THR VAL SER TRP ASN SER SEQRES 13 H 216 GLY ALA LEU THR SER GLY VAL HIS THR PHE PRO ALA VAL SEQRES 14 H 216 LEU GLN SER SER GLY LEU TYR SER LEU SER SER VAL VAL SEQRES 15 H 216 THR VAL PRO SER SER SER LEU GLY THR GLN THR TYR ILE SEQRES 16 H 216 CYS ASN VAL ASN HIS LYS PRO SER ASN THR LYS VAL ASP SEQRES 17 H 216 LYS ARG VAL GLU PRO LYS SER CYS HET CIT L 301 18 HET CIT L 302 18 HET GOL L 303 14 HET GOL L 304 13 HETNAM CIT CITRIC ACID HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CIT 2(C6 H8 O7) FORMUL 5 GOL 2(C3 H8 O3) FORMUL 7 HOH *261(H2 O) HELIX 1 AA1 GLU L 78 ALA L 82 5 5 HELIX 2 AA2 SER L 120 GLY L 127 1 8 HELIX 3 AA3 SER L 181 LYS L 187 1 7 HELIX 4 AA4 SER H 61 ILE H 64 5 4 HELIX 5 AA5 GLN H 83 THR H 87 5 5 HELIX 6 AA6 GLY H 94 ALA H 98 5 5 HELIX 7 AA7 SER H 153 ALA H 155 5 3 HELIX 8 AA8 SER H 184 LEU H 186 5 3 HELIX 9 AA9 LYS H 198 ASN H 201 5 4 SHEET 1 AA1 4 LEU L 4 SER L 7 0 SHEET 2 AA1 4 VAL L 19 ALA L 25 -1 O THR L 22 N SER L 7 SHEET 3 AA1 4 SER L 69 ILE L 74 -1 O ILE L 74 N VAL L 19 SHEET 4 AA1 4 PHE L 61 SER L 66 -1 N SER L 66 O SER L 69 SHEET 1 AA2 6 ILE L 10 ALA L 13 0 SHEET 2 AA2 6 THR L 101 LEU L 105 1 O GLU L 104 N MET L 11 SHEET 3 AA2 6 ALA L 83 GLN L 89 -1 N ALA L 83 O LEU L 103 SHEET 4 AA2 6 HIS L 33 GLN L 37 -1 N GLN L 37 O THR L 84 SHEET 5 AA2 6 LYS L 44 TYR L 48 -1 O ILE L 47 N TRP L 34 SHEET 6 AA2 6 LYS L 52 LEU L 53 -1 O LYS L 52 N TYR L 48 SHEET 1 AA3 4 ILE L 10 ALA L 13 0 SHEET 2 AA3 4 THR L 101 LEU L 105 1 O GLU L 104 N MET L 11 SHEET 3 AA3 4 ALA L 83 GLN L 89 -1 N ALA L 83 O LEU L 103 SHEET 4 AA3 4 THR L 96 PHE L 97 -1 O THR L 96 N GLN L 89 SHEET 1 AA4 4 SER L 113 PHE L 117 0 SHEET 2 AA4 4 ALA L 129 PHE L 138 -1 O ASN L 136 N SER L 113 SHEET 3 AA4 4 TYR L 172 LEU L 180 -1 O LEU L 174 N LEU L 135 SHEET 4 AA4 4 SER L 158 VAL L 162 -1 N GLN L 159 O THR L 177 SHEET 1 AA5 4 ALA L 152 LEU L 153 0 SHEET 2 AA5 4 LYS L 144 VAL L 149 -1 N VAL L 149 O ALA L 152 SHEET 3 AA5 4 VAL L 190 THR L 196 -1 O GLU L 194 N GLN L 146 SHEET 4 AA5 4 VAL L 204 ASN L 209 -1 O VAL L 204 N VAL L 195 SHEET 1 AA6 4 GLN H 3 SER H 7 0 SHEET 2 AA6 4 LEU H 18 SER H 25 -1 O THR H 23 N GLN H 5 SHEET 3 AA6 4 GLN H 77 LEU H 82 -1 O LEU H 80 N ILE H 20 SHEET 4 AA6 4 LEU H 67 ASP H 72 -1 N ASN H 70 O PHE H 79 SHEET 1 AA7 6 LEU H 11 VAL H 12 0 SHEET 2 AA7 6 THR H 104 VAL H 108 1 O THR H 107 N VAL H 12 SHEET 3 AA7 6 ALA H 88 VAL H 93 -1 N ALA H 88 O VAL H 106 SHEET 4 AA7 6 VAL H 34 GLN H 39 -1 N VAL H 37 O TYR H 91 SHEET 5 AA7 6 GLU H 46 ILE H 51 -1 O LEU H 48 N TRP H 36 SHEET 6 AA7 6 THR H 57 TYR H 59 -1 O ASN H 58 N VAL H 50 SHEET 1 AA8 4 SER H 117 LEU H 121 0 SHEET 2 AA8 4 THR H 132 TYR H 142 -1 O GLY H 136 N LEU H 121 SHEET 3 AA8 4 TYR H 173 PRO H 182 -1 O LEU H 175 N VAL H 139 SHEET 4 AA8 4 VAL H 160 THR H 162 -1 N HIS H 161 O VAL H 178 SHEET 1 AA9 4 SER H 117 LEU H 121 0 SHEET 2 AA9 4 THR H 132 TYR H 142 -1 O GLY H 136 N LEU H 121 SHEET 3 AA9 4 TYR H 173 PRO H 182 -1 O LEU H 175 N VAL H 139 SHEET 4 AA9 4 VAL H 166 LEU H 167 -1 N VAL H 166 O SER H 174 SHEET 1 AB1 3 THR H 148 TRP H 151 0 SHEET 2 AB1 3 TYR H 191 HIS H 197 -1 O ASN H 194 N SER H 150 SHEET 3 AB1 3 THR H 202 VAL H 208 -1 O VAL H 204 N VAL H 195 SSBOND 1 CYS L 23 CYS L 87 1555 1555 2.11 SSBOND 2 CYS L 133 CYS L 193 1555 1555 2.00 SSBOND 3 CYS H 22 CYS H 92 1555 1555 2.07 SSBOND 4 CYS H 137 CYS H 193 1555 1555 2.12 CISPEP 1 SER L 7 PRO L 8 0 -4.57 CISPEP 2 TYR L 139 PRO L 140 0 4.26 CISPEP 3 PHE H 143 PRO H 144 0 -6.84 CISPEP 4 GLU H 145 PRO H 146 0 -2.99 CRYST1 55.259 65.111 56.713 90.00 104.55 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018097 0.000000 0.004697 0.00000 SCALE2 0.000000 0.015358 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018217 0.00000