HEADER METAL TRANSPORT 24-OCT-22 8BF6 TITLE X-RAY STRUCTURE OF THE CEUE HOMOLOGUE FROM PARAGEOBACILLUS TITLE 2 THERMOGLUCOSIDASIUS - AZOTOCHELIN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: ABC TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARAGEOBACILLUS THERMOGLUCOSIDASIUS; SOURCE 3 ORGANISM_TAXID: 1426; SOURCE 4 GENE: BAA00_15370; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS PERIPLASMIC, SIDEROPHORE BINDING, BACTERIAL, APO PROTEIN, METAL KEYWDS 2 TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR K.S.WILSON,A.-K.DUHME-KLAIR,E.V.BLAGOVA,A.MILLER,R.BOOTH,E.J.DODSON REVDAT 4 07-FEB-24 8BF6 1 REMARK REVDAT 3 09-AUG-23 8BF6 1 JRNL REMARK REVDAT 2 19-JUL-23 8BF6 1 JRNL REVDAT 1 12-JUL-23 8BF6 0 JRNL AUTH E.V.BLAGOVA,A.H.MILLER,M.BENNETT,R.L.BOOTH,E.J.DODSON, JRNL AUTH 2 A.K.DUHME-KLAIR,K.S.WILSON JRNL TITL THERMOSTABLE HOMOLOGUES OF THE PERIPLASMIC JRNL TITL 2 SIDEROPHORE-BINDING PROTEIN CEUE FROM GEOBACILLUS JRNL TITL 3 STEAROTHERMOPHILUS AND PARAGEOBACILLUS THERMOGLUCOSIDASIUS. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 79 694 2023 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 37428843 JRNL DOI 10.1107/S2059798323004473 REMARK 2 REMARK 2 RESOLUTION. 1.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 21853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1084 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.97 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.02 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1511 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.56 REMARK 3 BIN R VALUE (WORKING SET) : 0.3530 REMARK 3 BIN FREE R VALUE SET COUNT : 83 REMARK 3 BIN FREE R VALUE : 0.3860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2167 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 41 REMARK 3 SOLVENT ATOMS : 29 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 59.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : -0.87100 REMARK 3 B33 (A**2) : 0.84100 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.178 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.162 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.281 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2258 ; 0.011 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 2134 ; 0.015 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3022 ; 1.348 ; 1.649 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4991 ; 0.550 ; 1.567 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 277 ; 7.095 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 6 ; 7.528 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 417 ;17.939 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 337 ; 0.058 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2469 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 395 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 466 ; 0.231 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 32 ; 0.181 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1105 ; 0.179 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 57 ; 0.222 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): 2 ; 0.000 ; 0.200 REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): 3 ; 0.063 ; 0.200 REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1114 ; 2.538 ; 4.111 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1111 ; 2.538 ; 4.110 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1389 ; 3.315 ; 6.156 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1388 ; 3.314 ; 6.155 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1144 ; 3.511 ; 4.464 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1132 ; 3.506 ; 4.464 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1633 ; 4.976 ; 6.543 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1628 ; 4.979 ; 6.540 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 20 A 314 REMARK 3 ORIGIN FOR THE GROUP (A): 9.6728 -8.0535 17.6784 REMARK 3 T TENSOR REMARK 3 T11: 0.0440 T22: 0.0870 REMARK 3 T33: 0.0665 T12: 0.0312 REMARK 3 T13: -0.0026 T23: -0.0571 REMARK 3 L TENSOR REMARK 3 L11: 1.5474 L22: 3.5639 REMARK 3 L33: 2.1693 L12: 0.0056 REMARK 3 L13: -0.2171 L23: 1.0343 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: 0.2833 S13: -0.3026 REMARK 3 S21: -0.1941 S22: -0.0142 S23: 0.1219 REMARK 3 S31: 0.1347 S32: 0.1769 S33: 0.0324 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8BF6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292126064. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979499 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21889 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.969 REMARK 200 RESOLUTION RANGE LOW (A) : 70.836 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 9.02 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 70.74 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 0.02200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 8PBX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 1500; 0.1 M PCMB PH 4.0 (NA REMARK 280 PROPIONATE: NA CACODYLATE: BISTRIS PROPANE 2:1:2). LIGAND: 5MM REMARK 280 FE(III) AZOTOCHELIN (WASHED) 1:10 RATIO PROTEIN:LIGAND., VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.73550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.73550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 18.14750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 58.35550 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 18.14750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 58.35550 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 70.73550 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 18.14750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 58.35550 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 70.73550 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 18.14750 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 58.35550 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 NI NI A 303 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 1 REMARK 465 GLY A 2 REMARK 465 ASN A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 ASN A 6 REMARK 465 ALA A 7 REMARK 465 LYS A 8 REMARK 465 ASN A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 ASN A 14 REMARK 465 PRO A 15 REMARK 465 LYS A 16 REMARK 465 ASN A 17 REMARK 465 ASP A 18 REMARK 465 SER A 19 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 276 FE FE A 301 1.40 REMARK 500 HH TYR A 274 O HOH A 402 1.59 REMARK 500 O HOH A 409 O HOH A 426 1.69 REMARK 500 O1 SO4 A 307 O HOH A 401 1.93 REMARK 500 OE1 GLU A 151 OE2 GLU A 155 2.04 REMARK 500 O HOH A 421 O HOH A 426 2.09 REMARK 500 NZ LYS A 167 OE1 GLU A 297 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 103 -153.07 -144.90 REMARK 500 THR A 171 148.13 -38.64 REMARK 500 SER A 172 -120.49 -92.67 REMARK 500 SER A 246 5.45 -151.09 REMARK 500 ALA A 278 -142.51 -123.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 303 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 88 OD2 REMARK 620 2 ASP A 88 OD2 0.0 REMARK 620 3 SO4 A 307 S 128.5 128.5 REMARK 620 4 SO4 A 307 O1 120.6 120.6 33.8 REMARK 620 5 SO4 A 307 O4 122.1 122.1 34.0 67.7 REMARK 620 6 SO4 A 307 O4 126.8 126.8 6.8 27.1 40.7 REMARK 620 7 SO4 A 307 S 123.1 123.1 27.0 60.8 7.1 33.7 REMARK 620 8 SO4 A 307 O1 108.3 108.3 60.7 94.4 26.7 67.3 33.7 REMARK 620 9 HOH A 401 O 84.7 84.7 92.7 59.0 126.6 86.0 119.6 153.1 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 305 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 90 OE2 REMARK 620 2 GLU A 94 OE2 86.6 REMARK 620 3 GLU A 94 OE1 131.0 46.2 REMARK 620 4 SO4 A 307 S 105.5 138.6 104.5 REMARK 620 5 SO4 A 307 O2 101.2 104.8 82.9 34.7 REMARK 620 6 SO4 A 307 O3 103.5 168.9 122.8 34.5 69.2 REMARK 620 7 SO4 A 307 O3 135.3 99.5 59.8 44.7 34.3 70.2 REMARK 620 8 SO4 A 307 O2 139.8 133.3 87.5 44.2 68.5 36.3 48.1 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 308 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 98 OD1 REMARK 620 2 HOH A 428 O 35.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 304 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 151 OE1 REMARK 620 2 GLU A 151 OE1 0.0 REMARK 620 3 GLU A 155 OE1 112.1 112.1 REMARK 620 4 GLU A 155 OE2 63.7 63.7 71.9 REMARK 620 5 GLU A 155 OE1 112.1 112.1 0.0 71.9 REMARK 620 6 GLU A 155 OE2 63.7 63.7 71.9 0.0 71.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 306 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 211 OE1 REMARK 620 2 LYS A 294 NZ 48.1 REMARK 620 3 GLU A 297 OE1 42.3 6.6 REMARK 620 4 GLU A 297 OE2 45.3 6.1 3.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 215 NE2 REMARK 620 2 TYR A 276 OH 86.5 REMARK 620 3 95B A 302 OAG 83.0 168.8 REMARK 620 4 95B A 302 OAE 103.2 96.8 81.8 REMARK 620 5 95B A 302 OAH 95.3 100.9 84.0 155.1 REMARK 620 6 95B A 302 OAF 169.9 88.6 102.4 86.1 77.0 REMARK 620 N 1 2 3 4 5 DBREF1 8BF6 A 1 297 UNP A0A1Y3Q1V3_PARTM DBREF2 8BF6 A A0A1Y3Q1V3 22 318 SEQRES 1 A 297 CYS GLY ASN GLU ASP ASN ALA LYS ASN ALA SER SER SER SEQRES 2 A 297 ASN PRO LYS ASN ASP SER GLU GLU ILE THR ILE LYS HIS SEQRES 3 A 297 GLU LEU GLY GLU THR LYS VAL LYS LYS LYS PRO GLU LYS SEQRES 4 A 297 VAL VAL VAL PHE ASP PHE GLY VAL LEU ASP SER LEU ASP SEQRES 5 A 297 LYS LEU GLY VAL GLU VAL THR GLY VAL PRO LYS ALA ASN SEQRES 6 A 297 LEU PRO SER TYR LEU GLU LYS TYR LYS ASP SER LYS TYR SEQRES 7 A 297 GLU ASN VAL GLY GLY LEU MET GLU PRO ASP PHE GLU LYS SEQRES 8 A 297 ILE ASN GLU ILE ALA PRO ASP LEU ILE ILE ILE SER GLY SEQRES 9 A 297 ARG GLN ALA ASN SER TYR GLU LYS PHE ALA GLU ILE ALA SEQRES 10 A 297 PRO THR VAL TYR MET GLY ILE ASP THR LYS ASN TYR ILE SEQRES 11 A 297 ASP SER PHE ALA ASN ASN MET LYS THR LEU GLY LYS ILE SEQRES 12 A 297 PHE GLY LYS GLU LYS GLU VAL GLU LYS GLU LEU GLU SER SEQRES 13 A 297 ILE ASN LYS GLN ILE GLU ALA VAL LYS ALA LYS ALA GLU SEQRES 14 A 297 LYS THR SER GLY LYS ALA LEU ILE VAL LEU THR THR GLY SEQRES 15 A 297 GLY LYS VAL SER ALA TYR GLY PRO GLY SER ARG PHE GLY SEQRES 16 A 297 ILE ILE HIS ASP VAL LEU GLY ILE LYS PRO VAL ASP ALA SEQRES 17 A 297 ASN ILE GLU VAL SER THR HIS GLY GLN SER ILE SER PHE SEQRES 18 A 297 GLU TYR ILE ALA GLU LYS ASN PRO ASP TYR LEU PHE VAL SEQRES 19 A 297 VAL ASP ARG ASP ALA VAL VAL ALA GLY LYS PRO SER ALA SEQRES 20 A 297 LYS GLN THR ILE GLU ASN GLU LEU VAL LYS LYS THR ASN SEQRES 21 A 297 ALA TYR LYS ASN ASN ARG ILE ILE TYR LEU ASN PRO ASN SEQRES 22 A 297 TYR TRP TYR LEU ALA GLY GLY GLY LEU ILE SER VAL ALA SEQRES 23 A 297 GLU MET ILE ASN GLU VAL GLU LYS GLY ILE GLU HET FE A 301 1 HET 95B A 302 51 HET NI A 303 1 HET NI A 304 1 HET NI A 305 1 HET NI A 306 1 HET SO4 A 307 5 HET NI A 308 1 HETNAM FE FE (III) ION HETNAM 95B AZOTOCHELIN HETNAM NI NICKEL (II) ION HETNAM SO4 SULFATE ION FORMUL 2 FE FE 3+ FORMUL 3 95B C20 H22 N2 O8 FORMUL 4 NI 5(NI 2+) FORMUL 8 SO4 O4 S 2- FORMUL 10 HOH *29(H2 O) HELIX 1 AA1 ASP A 44 LEU A 54 1 11 HELIX 2 AA2 PRO A 62 LEU A 66 5 5 HELIX 3 AA3 PRO A 67 ASP A 75 5 9 HELIX 4 AA4 ASP A 88 ALA A 96 1 9 HELIX 5 AA5 SER A 103 ASN A 108 5 6 HELIX 6 AA6 SER A 109 ALA A 117 1 9 HELIX 7 AA7 ASN A 128 GLY A 145 1 18 HELIX 8 AA8 LYS A 146 LYS A 170 1 25 HELIX 9 AA9 GLY A 195 VAL A 200 1 6 HELIX 10 AB1 SER A 220 ASN A 228 1 9 HELIX 11 AB2 ARG A 237 ALA A 242 1 6 HELIX 12 AB3 SER A 246 GLU A 252 1 7 HELIX 13 AB4 GLU A 254 LYS A 258 5 5 HELIX 14 AB5 THR A 259 ASN A 264 1 6 HELIX 15 AB6 ASN A 271 TYR A 276 1 6 HELIX 16 AB7 GLY A 281 GLU A 297 1 17 SHEET 1 AA1 2 GLU A 21 HIS A 26 0 SHEET 2 AA1 2 GLY A 29 LYS A 34 -1 O VAL A 33 N ILE A 22 SHEET 1 AA2 3 VAL A 40 VAL A 42 0 SHEET 2 AA2 3 LEU A 99 ILE A 102 1 O ILE A 101 N VAL A 41 SHEET 3 AA2 3 THR A 119 TYR A 121 1 O VAL A 120 N ILE A 100 SHEET 1 AA3 2 GLY A 60 VAL A 61 0 SHEET 2 AA3 2 GLU A 79 ASN A 80 1 O GLU A 79 N VAL A 61 SHEET 1 AA4 2 GLY A 82 GLY A 83 0 SHEET 2 AA4 2 GLU A 86 PRO A 87 -1 O GLU A 86 N GLY A 83 SHEET 1 AA5 4 LYS A 204 PRO A 205 0 SHEET 2 AA5 4 LYS A 174 THR A 181 1 N ALA A 175 O LYS A 204 SHEET 3 AA5 4 LYS A 184 TYR A 188 -1 O TYR A 188 N ILE A 177 SHEET 4 AA5 4 GLN A 217 ILE A 219 -1 O GLN A 217 N ALA A 187 SHEET 1 AA6 4 LYS A 204 PRO A 205 0 SHEET 2 AA6 4 LYS A 174 THR A 181 1 N ALA A 175 O LYS A 204 SHEET 3 AA6 4 TYR A 231 ASP A 236 1 O PHE A 233 N VAL A 178 SHEET 4 AA6 4 ILE A 267 LEU A 270 1 O ILE A 268 N VAL A 234 LINK OD2 ASP A 88 NI NI A 303 1555 1555 1.97 LINK OD2 ASP A 88 NI NI A 303 1555 3555 1.98 LINK OE2 GLU A 90 NI NI A 305 1555 1555 1.94 LINK OE2 GLU A 94 NI NI A 305 1555 1555 1.87 LINK OE1 GLU A 94 NI NI A 305 1555 3555 2.10 LINK OD1 ASP A 98 NI NI A 308 1555 5455 2.49 LINK OE1 GLU A 151 NI NI A 304 1555 1555 1.95 LINK OE1 GLU A 151 NI NI A 304 1555 4555 2.19 LINK OE1 GLU A 155 NI NI A 304 1555 1555 1.90 LINK OE2 GLU A 155 NI NI A 304 1555 1555 1.91 LINK OE1 GLU A 155 NI NI A 304 1555 4555 2.73 LINK OE2 GLU A 155 NI NI A 304 1555 4555 2.54 LINK OE1 GLU A 211 NI NI A 306 1555 1555 1.92 LINK NE2 HIS A 215 FE FE A 301 1555 1555 2.25 LINK OH TYR A 276 FE FE A 301 1555 1555 2.02 LINK NZ LYS A 294 NI NI A 306 1555 1655 2.78 LINK OE1 GLU A 297 NI NI A 306 1555 1655 1.83 LINK OE2 GLU A 297 NI NI A 306 1555 1655 1.94 LINK FE FE A 301 OAG 95B A 302 1555 1555 2.00 LINK FE FE A 301 OAE 95B A 302 1555 1555 1.98 LINK FE FE A 301 OAH 95B A 302 1555 1555 2.02 LINK FE FE A 301 OAF 95B A 302 1555 1555 1.96 LINK NI NI A 303 S SO4 A 307 1555 1555 2.58 LINK NI NI A 303 O1 SO4 A 307 1555 1555 2.04 LINK NI NI A 303 O4 SO4 A 307 1555 1555 2.00 LINK NI NI A 303 O4 SO4 A 307 1555 3555 1.98 LINK NI NI A 303 S SO4 A 307 1555 3555 2.59 LINK NI NI A 303 O1 SO4 A 307 1555 3555 2.07 LINK NI NI A 303 O HOH A 401 1555 1555 1.86 LINK NI NI A 303 O HOH A 401 1555 3555 1.91 LINK NI NI A 305 S SO4 A 307 1555 1555 2.52 LINK NI NI A 305 O2 SO4 A 307 1555 1555 1.96 LINK NI NI A 305 O3 SO4 A 307 1555 1555 1.98 LINK NI NI A 305 O3 SO4 A 307 1555 3555 2.79 LINK NI NI A 305 O2 SO4 A 307 1555 3555 2.69 LINK NI NI A 308 O HOH A 428 1555 1555 2.24 CRYST1 36.295 116.711 141.471 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027552 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008568 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007069 0.00000