HEADER IMMUNE SYSTEM 29-OCT-22 8BH5 TITLE SARS-COV-2 BA.2.12.1 RBD IN COMPLEX WITH BETA-27 FAB AND C1 NANOBODY COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-27 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: BETA-27 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: SPIKE PROTEIN S1; COMPND 11 CHAIN: E; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: NANOBODY C1; COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 13 2; SOURCE 14 ORGANISM_TAXID: 2697049; SOURCE 15 GENE: S, 2; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 MOL_ID: 4; SOURCE 19 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 20 ORGANISM_TAXID: 9844; SOURCE 21 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS VIRAL PROTEIN/IMMUNE SYSTEM, SARS-COV-2, OMICRON, BA.2.12.1, RBD, KEYWDS 2 BETA-27, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR J.HUO,D.ZHOU,J.REN,D.I.STUART REVDAT 2 31-JAN-24 8BH5 1 REMARK REVDAT 1 23-NOV-22 8BH5 0 JRNL AUTH J.HUO,A.DIJOKAITE-GURALIUC,R.NUTALAI,R.DAS,D.ZHOU, JRNL AUTH 2 A.J.MENTZER,E.E.FRY,J.MONGKOLSAPAYA,J.REN,D.I.STUART, JRNL AUTH 3 G.R.SCREATON JRNL TITL HUMORAL RESPONSES AGAINST SARS-COV-2 OMICRON BA.2.11, JRNL TITL 2 BA.2.12.1 AND BA.2.13 FROM VACCINE AND BA.1 SERUM. JRNL REF CELL DISCOV V. 8 119 2022 JRNL REFN ESSN 2056-5968 JRNL PMID 36319620 JRNL DOI 10.1038/S41421-022-00482-3 REMARK 2 REMARK 2 RESOLUTION. 2.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.78 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 37063 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 54.7800 - 5.5900 1.00 3027 161 0.1698 0.2070 REMARK 3 2 5.5900 - 4.4400 1.00 3006 141 0.1336 0.2128 REMARK 3 3 4.4400 - 3.8800 1.00 2960 178 0.1466 0.1795 REMARK 3 4 3.8800 - 3.5200 1.00 2948 140 0.1724 0.2111 REMARK 3 5 3.5200 - 3.2700 1.00 2990 153 0.1813 0.2248 REMARK 3 6 3.2700 - 3.0800 1.00 2992 137 0.2057 0.2758 REMARK 3 7 3.0800 - 2.9200 1.00 2931 175 0.2126 0.2425 REMARK 3 8 2.9200 - 2.8000 1.00 2915 155 0.2294 0.2818 REMARK 3 9 2.8000 - 2.6900 0.94 2782 148 0.2431 0.2902 REMARK 3 10 2.6900 - 2.6000 0.88 2570 160 0.2870 0.3231 REMARK 3 11 2.6000 - 2.5100 0.83 2466 135 0.3097 0.3647 REMARK 3 12 2.5100 - 2.4400 0.71 2099 99 0.3231 0.3589 REMARK 3 13 2.4400 - 2.3800 0.51 1535 60 0.3402 0.3754 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.342 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.416 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5953 REMARK 3 ANGLE : 0.498 8075 REMARK 3 CHIRALITY : 0.042 881 REMARK 3 PLANARITY : 0.004 1034 REMARK 3 DIHEDRAL : 11.775 2131 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 27 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7991 -38.4888 33.6746 REMARK 3 T TENSOR REMARK 3 T11: 0.3814 T22: 0.3611 REMARK 3 T33: 0.3308 T12: 0.0283 REMARK 3 T13: 0.0005 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 2.8175 L22: 2.6453 REMARK 3 L33: 2.7158 L12: -0.8430 REMARK 3 L13: -0.7222 L23: 1.4620 REMARK 3 S TENSOR REMARK 3 S11: -0.0598 S12: -0.0839 S13: -0.1113 REMARK 3 S21: 0.1236 S22: -0.0386 S23: 0.0198 REMARK 3 S31: 0.1977 S32: 0.1292 S33: 0.1137 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 114 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1069 -22.1604 45.3147 REMARK 3 T TENSOR REMARK 3 T11: 0.4828 T22: 0.5565 REMARK 3 T33: 0.3936 T12: -0.0500 REMARK 3 T13: 0.0072 T23: 0.1159 REMARK 3 L TENSOR REMARK 3 L11: 1.5936 L22: 1.5382 REMARK 3 L33: 1.7569 L12: 0.5842 REMARK 3 L13: -0.0572 L23: 0.8178 REMARK 3 S TENSOR REMARK 3 S11: -0.3821 S12: -0.1073 S13: 0.1672 REMARK 3 S21: 0.1105 S22: 0.2441 S23: 0.2681 REMARK 3 S31: -0.1489 S32: -0.4130 S33: 0.0808 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 139 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8398 -27.6850 42.6132 REMARK 3 T TENSOR REMARK 3 T11: 0.2870 T22: 0.3284 REMARK 3 T33: 0.3891 T12: -0.0150 REMARK 3 T13: -0.0097 T23: 0.0619 REMARK 3 L TENSOR REMARK 3 L11: 5.4993 L22: 2.7910 REMARK 3 L33: 3.5674 L12: 0.4413 REMARK 3 L13: 1.8358 L23: 0.5721 REMARK 3 S TENSOR REMARK 3 S11: 0.1225 S12: -0.2836 S13: -0.6214 REMARK 3 S21: 0.2080 S22: 0.1594 S23: 0.2489 REMARK 3 S31: 0.1837 S32: -0.3798 S33: -0.2360 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 1 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.7582 -27.8290 11.6960 REMARK 3 T TENSOR REMARK 3 T11: 0.4822 T22: 0.4854 REMARK 3 T33: 0.3593 T12: 0.1520 REMARK 3 T13: -0.0022 T23: -0.0424 REMARK 3 L TENSOR REMARK 3 L11: 9.3930 L22: 4.2041 REMARK 3 L33: 2.8167 L12: 0.1828 REMARK 3 L13: -1.4680 L23: -1.7348 REMARK 3 S TENSOR REMARK 3 S11: 0.4058 S12: 0.5117 S13: 0.2992 REMARK 3 S21: -0.2588 S22: -0.2851 S23: -0.2110 REMARK 3 S31: -0.1982 S32: -0.0679 S33: -0.0843 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 31 THROUGH 62 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.1738 -40.5831 16.0200 REMARK 3 T TENSOR REMARK 3 T11: 0.4221 T22: 0.4743 REMARK 3 T33: 0.3982 T12: 0.0334 REMARK 3 T13: -0.0637 T23: -0.0560 REMARK 3 L TENSOR REMARK 3 L11: 3.2735 L22: 3.4313 REMARK 3 L33: 3.1048 L12: -0.9869 REMARK 3 L13: -0.1905 L23: 0.2208 REMARK 3 S TENSOR REMARK 3 S11: -0.0163 S12: 0.3201 S13: -0.3681 REMARK 3 S21: -0.3096 S22: 0.0707 S23: 0.1382 REMARK 3 S31: 0.2338 S32: -0.0347 S33: -0.0336 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 63 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5977 -26.8710 23.6036 REMARK 3 T TENSOR REMARK 3 T11: 0.3273 T22: 0.3598 REMARK 3 T33: 0.2813 T12: 0.0179 REMARK 3 T13: -0.0545 T23: 0.0356 REMARK 3 L TENSOR REMARK 3 L11: 2.9651 L22: 1.9036 REMARK 3 L33: 0.5236 L12: -1.3519 REMARK 3 L13: -0.8344 L23: 0.9466 REMARK 3 S TENSOR REMARK 3 S11: 0.0142 S12: 0.2915 S13: -0.2728 REMARK 3 S21: -0.0213 S22: -0.1036 S23: 0.1826 REMARK 3 S31: -0.0086 S32: -0.0365 S33: 0.0971 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 138 THROUGH 163 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.2745 -12.0291 30.5580 REMARK 3 T TENSOR REMARK 3 T11: 0.4006 T22: 0.4179 REMARK 3 T33: 0.4686 T12: -0.0466 REMARK 3 T13: 0.0460 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 3.5338 L22: 1.9554 REMARK 3 L33: 2.8943 L12: 0.7605 REMARK 3 L13: 1.0273 L23: 2.3537 REMARK 3 S TENSOR REMARK 3 S11: -0.0357 S12: 0.1731 S13: 0.3202 REMARK 3 S21: -0.2185 S22: -0.0019 S23: 0.2209 REMARK 3 S31: -0.4764 S32: 0.2106 S33: -0.0743 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'L' AND (RESID 164 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8051 -12.9754 33.8863 REMARK 3 T TENSOR REMARK 3 T11: 0.2918 T22: 0.3421 REMARK 3 T33: 0.3892 T12: -0.0263 REMARK 3 T13: -0.0284 T23: 0.0468 REMARK 3 L TENSOR REMARK 3 L11: 2.9374 L22: 4.1390 REMARK 3 L33: 5.2897 L12: -0.7474 REMARK 3 L13: -0.3932 L23: 1.7126 REMARK 3 S TENSOR REMARK 3 S11: 0.0719 S12: -0.0599 S13: 0.0851 REMARK 3 S21: 0.0272 S22: 0.0903 S23: 0.1672 REMARK 3 S31: -0.0797 S32: -0.2026 S33: -0.1412 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 333 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.5562 -38.1238 4.0920 REMARK 3 T TENSOR REMARK 3 T11: 0.6941 T22: 0.7521 REMARK 3 T33: 0.8335 T12: 0.1318 REMARK 3 T13: 0.2248 T23: 0.1253 REMARK 3 L TENSOR REMARK 3 L11: 8.4280 L22: 4.5044 REMARK 3 L33: 5.5435 L12: 0.8434 REMARK 3 L13: -0.6418 L23: -0.8437 REMARK 3 S TENSOR REMARK 3 S11: -0.4017 S12: 0.9111 S13: 0.1979 REMARK 3 S21: -0.8812 S22: -0.0080 S23: -1.3616 REMARK 3 S31: -0.2924 S32: 1.0802 S33: 0.1399 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 350 THROUGH 364 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.1942 -42.1840 11.6756 REMARK 3 T TENSOR REMARK 3 T11: 0.4839 T22: 0.6072 REMARK 3 T33: 0.7759 T12: 0.0262 REMARK 3 T13: 0.0940 T23: 0.0708 REMARK 3 L TENSOR REMARK 3 L11: 3.3092 L22: 8.0795 REMARK 3 L33: 5.5248 L12: 2.5740 REMARK 3 L13: 0.3249 L23: -0.3940 REMARK 3 S TENSOR REMARK 3 S11: 0.3321 S12: 0.8370 S13: -0.0522 REMARK 3 S21: 0.0275 S22: 0.0152 S23: -1.5268 REMARK 3 S31: 0.0551 S32: 1.0564 S33: -0.3058 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 365 THROUGH 375 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.7292 -25.3088 9.5100 REMARK 3 T TENSOR REMARK 3 T11: 0.8841 T22: 0.7498 REMARK 3 T33: 1.0541 T12: -0.1289 REMARK 3 T13: 0.0580 T23: 0.1623 REMARK 3 L TENSOR REMARK 3 L11: 2.9433 L22: 2.0052 REMARK 3 L33: 7.4683 L12: -1.2901 REMARK 3 L13: -1.0854 L23: -1.2607 REMARK 3 S TENSOR REMARK 3 S11: 0.7131 S12: -0.0136 S13: 1.0452 REMARK 3 S21: 0.0785 S22: -1.2593 S23: -1.4654 REMARK 3 S31: -1.0910 S32: 0.9634 S33: 0.5190 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 376 THROUGH 393 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.8442 -29.3643 19.3539 REMARK 3 T TENSOR REMARK 3 T11: 0.6154 T22: 0.6277 REMARK 3 T33: 1.3103 T12: -0.0563 REMARK 3 T13: -0.2208 T23: -0.1039 REMARK 3 L TENSOR REMARK 3 L11: 1.3404 L22: 6.1371 REMARK 3 L33: 7.7813 L12: -2.3831 REMARK 3 L13: -0.8423 L23: -2.0522 REMARK 3 S TENSOR REMARK 3 S11: 0.4559 S12: -0.0766 S13: -0.7862 REMARK 3 S21: 0.9686 S22: 0.2991 S23: -2.4983 REMARK 3 S31: -0.3382 S32: 1.1132 S33: -0.6126 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 394 THROUGH 421 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.2871 -37.8522 17.9948 REMARK 3 T TENSOR REMARK 3 T11: 0.3494 T22: 0.3318 REMARK 3 T33: 0.3835 T12: 0.0267 REMARK 3 T13: -0.0035 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.7924 L22: 4.8648 REMARK 3 L33: 5.8132 L12: 0.8337 REMARK 3 L13: -1.0449 L23: 0.0241 REMARK 3 S TENSOR REMARK 3 S11: 0.1292 S12: -0.0366 S13: 0.2526 REMARK 3 S21: 0.2133 S22: -0.0313 S23: -0.4405 REMARK 3 S31: -0.0658 S32: -0.1408 S33: -0.1264 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 422 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 58.8114 -39.4281 12.7664 REMARK 3 T TENSOR REMARK 3 T11: 0.2893 T22: 0.3194 REMARK 3 T33: 0.2723 T12: 0.0562 REMARK 3 T13: 0.0286 T23: 0.0357 REMARK 3 L TENSOR REMARK 3 L11: 3.5840 L22: 3.5153 REMARK 3 L33: 1.6927 L12: -0.1630 REMARK 3 L13: -0.2207 L23: -0.2414 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: 0.0703 S13: -0.0520 REMARK 3 S21: -0.1100 S22: -0.0774 S23: -0.3750 REMARK 3 S31: 0.0336 S32: 0.1855 S33: 0.1143 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 460 THROUGH 469 ) REMARK 3 ORIGIN FOR THE GROUP (A): 62.8537 -48.7640 20.3600 REMARK 3 T TENSOR REMARK 3 T11: 0.3903 T22: 0.4290 REMARK 3 T33: 0.3820 T12: 0.0910 REMARK 3 T13: -0.1027 T23: 0.0514 REMARK 3 L TENSOR REMARK 3 L11: 3.5684 L22: 2.7655 REMARK 3 L33: 2.8382 L12: 0.1609 REMARK 3 L13: -1.0538 L23: 1.8958 REMARK 3 S TENSOR REMARK 3 S11: -0.2476 S12: -0.7623 S13: -0.4946 REMARK 3 S21: 0.2800 S22: -0.2227 S23: -0.2678 REMARK 3 S31: 0.1276 S32: 0.4571 S33: 0.5045 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 470 THROUGH 479 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.8654 -57.6448 22.1767 REMARK 3 T TENSOR REMARK 3 T11: 0.6034 T22: 0.3552 REMARK 3 T33: 0.6621 T12: -0.0210 REMARK 3 T13: 0.0697 T23: 0.0392 REMARK 3 L TENSOR REMARK 3 L11: 3.1905 L22: 7.5956 REMARK 3 L33: 8.8650 L12: 1.6067 REMARK 3 L13: -0.8859 L23: -2.0254 REMARK 3 S TENSOR REMARK 3 S11: -0.4263 S12: -0.2088 S13: -1.3829 REMARK 3 S21: 0.5383 S22: 0.2038 S23: 0.4298 REMARK 3 S31: 0.9186 S32: -0.2308 S33: 0.2202 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 480 THROUGH 506 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.9950 -44.7846 11.4521 REMARK 3 T TENSOR REMARK 3 T11: 0.4779 T22: 0.4289 REMARK 3 T33: 0.3908 T12: 0.0507 REMARK 3 T13: 0.0690 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 2.0226 L22: 1.5487 REMARK 3 L33: 0.9212 L12: 0.5419 REMARK 3 L13: -0.5197 L23: -1.0774 REMARK 3 S TENSOR REMARK 3 S11: -0.2558 S12: 0.2844 S13: -0.2787 REMARK 3 S21: -0.7229 S22: 0.2053 S23: -0.1418 REMARK 3 S31: 0.4066 S32: -0.0970 S33: 0.1616 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 507 THROUGH 525 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.9082 -36.1705 14.4197 REMARK 3 T TENSOR REMARK 3 T11: 0.4213 T22: 0.4630 REMARK 3 T33: 0.6984 T12: -0.0503 REMARK 3 T13: -0.0049 T23: 0.0568 REMARK 3 L TENSOR REMARK 3 L11: 0.6817 L22: 5.9382 REMARK 3 L33: 8.0597 L12: -0.0313 REMARK 3 L13: 0.5444 L23: -0.2592 REMARK 3 S TENSOR REMARK 3 S11: 0.0708 S12: 0.6791 S13: 0.3736 REMARK 3 S21: 0.5039 S22: -0.2121 S23: -1.3773 REMARK 3 S31: -0.3483 S32: 1.0628 S33: 0.0183 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 59.5390 -11.9601 31.3411 REMARK 3 T TENSOR REMARK 3 T11: 0.8849 T22: 0.5868 REMARK 3 T33: 0.6814 T12: -0.0366 REMARK 3 T13: -0.0614 T23: -0.1522 REMARK 3 L TENSOR REMARK 3 L11: 7.8148 L22: 2.0559 REMARK 3 L33: 7.7595 L12: -2.5318 REMARK 3 L13: 0.8179 L23: -2.9750 REMARK 3 S TENSOR REMARK 3 S11: -0.2837 S12: -1.3473 S13: 0.5071 REMARK 3 S21: 1.4880 S22: 0.4105 S23: -0.0727 REMARK 3 S31: -1.0866 S32: -0.5132 S33: -0.0042 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 9 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.4193 2.9038 12.3541 REMARK 3 T TENSOR REMARK 3 T11: 0.7680 T22: 0.5971 REMARK 3 T33: 0.9487 T12: 0.0240 REMARK 3 T13: 0.2126 T23: 0.0818 REMARK 3 L TENSOR REMARK 3 L11: 2.0112 L22: 0.9292 REMARK 3 L33: 2.7665 L12: 0.6870 REMARK 3 L13: -2.4932 L23: 0.6386 REMARK 3 S TENSOR REMARK 3 S11: -0.4285 S12: 0.3656 S13: 1.5873 REMARK 3 S21: -0.5141 S22: 0.0634 S23: -1.5067 REMARK 3 S31: -1.8512 S32: -0.5213 S33: 0.2294 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 18 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.7287 -13.7607 28.1824 REMARK 3 T TENSOR REMARK 3 T11: 0.8236 T22: 0.5148 REMARK 3 T33: 0.8977 T12: 0.0297 REMARK 3 T13: -0.2002 T23: -0.1869 REMARK 3 L TENSOR REMARK 3 L11: 2.9774 L22: 4.7660 REMARK 3 L33: 3.1801 L12: -2.6582 REMARK 3 L13: 0.2732 L23: -0.9265 REMARK 3 S TENSOR REMARK 3 S11: 0.1357 S12: -0.3638 S13: 0.6801 REMARK 3 S21: 1.1658 S22: -0.2095 S23: -1.1468 REMARK 3 S31: 0.1266 S32: 0.6571 S33: -0.0695 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 33 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.9529 -15.4962 16.0809 REMARK 3 T TENSOR REMARK 3 T11: 0.5230 T22: 0.3817 REMARK 3 T33: 0.5929 T12: -0.0193 REMARK 3 T13: 0.0542 T23: -0.0787 REMARK 3 L TENSOR REMARK 3 L11: 8.6010 L22: 7.7214 REMARK 3 L33: 4.3824 L12: -4.1611 REMARK 3 L13: -0.7804 L23: -2.0102 REMARK 3 S TENSOR REMARK 3 S11: 0.2655 S12: 0.4340 S13: -0.1874 REMARK 3 S21: 0.4658 S22: -0.0046 S23: -0.0344 REMARK 3 S31: -0.1970 S32: -0.0163 S33: -0.2304 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 53 THROUGH 60 ) REMARK 3 ORIGIN FOR THE GROUP (A): 72.9094 -16.2689 18.1079 REMARK 3 T TENSOR REMARK 3 T11: 0.3904 T22: 0.5066 REMARK 3 T33: 0.8918 T12: -0.0564 REMARK 3 T13: -0.1082 T23: -0.1499 REMARK 3 L TENSOR REMARK 3 L11: 6.2889 L22: 5.9854 REMARK 3 L33: 6.6795 L12: -1.5900 REMARK 3 L13: 0.8369 L23: -0.7811 REMARK 3 S TENSOR REMARK 3 S11: 0.0823 S12: -0.2456 S13: 0.4523 REMARK 3 S21: 0.2865 S22: -0.0412 S23: -1.6616 REMARK 3 S31: -0.2257 S32: 1.0675 S33: -0.3796 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 61 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 67.5047 -9.2130 13.2049 REMARK 3 T TENSOR REMARK 3 T11: 0.5540 T22: 0.4695 REMARK 3 T33: 0.8564 T12: -0.0290 REMARK 3 T13: 0.1927 T23: 0.0599 REMARK 3 L TENSOR REMARK 3 L11: 7.3422 L22: 7.2424 REMARK 3 L33: 5.0872 L12: -1.9579 REMARK 3 L13: 0.9148 L23: 0.1648 REMARK 3 S TENSOR REMARK 3 S11: 0.2046 S12: 0.7748 S13: 1.0469 REMARK 3 S21: -0.3406 S22: 0.1289 S23: -1.7025 REMARK 3 S31: -0.6609 S32: 0.8457 S33: -0.3374 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 74 THROUGH 99 ) REMARK 3 ORIGIN FOR THE GROUP (A): 61.5424 -7.5594 18.2121 REMARK 3 T TENSOR REMARK 3 T11: 0.6135 T22: 0.4684 REMARK 3 T33: 0.7588 T12: -0.0806 REMARK 3 T13: 0.0299 T23: -0.0459 REMARK 3 L TENSOR REMARK 3 L11: 3.9560 L22: 6.1385 REMARK 3 L33: 2.8188 L12: -2.5964 REMARK 3 L13: -1.3094 L23: -0.8064 REMARK 3 S TENSOR REMARK 3 S11: 0.3425 S12: -0.0287 S13: 0.7793 REMARK 3 S21: 0.1108 S22: -0.1829 S23: -1.0760 REMARK 3 S31: -0.1943 S32: 0.5199 S33: -0.0352 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 100 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 60.3298 -21.8696 22.1981 REMARK 3 T TENSOR REMARK 3 T11: 0.5642 T22: 0.3100 REMARK 3 T33: 0.4413 T12: 0.0438 REMARK 3 T13: 0.0198 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 6.0330 L22: 5.7396 REMARK 3 L33: 3.7352 L12: -1.7704 REMARK 3 L13: -0.5626 L23: 0.3027 REMARK 3 S TENSOR REMARK 3 S11: -0.2727 S12: -0.4992 S13: 0.3374 REMARK 3 S21: 1.1189 S22: 0.2258 S23: -0.1607 REMARK 3 S31: 0.5263 S32: -0.0959 S33: 0.0724 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 51.7136 -2.1134 13.7734 REMARK 3 T TENSOR REMARK 3 T11: 0.6415 T22: 0.4297 REMARK 3 T33: 0.5830 T12: 0.0736 REMARK 3 T13: 0.0531 T23: 0.0938 REMARK 3 L TENSOR REMARK 3 L11: 4.0917 L22: 2.9810 REMARK 3 L33: 7.8490 L12: 0.0775 REMARK 3 L13: -4.0331 L23: 3.3219 REMARK 3 S TENSOR REMARK 3 S11: 0.5862 S12: 1.1839 S13: 0.0019 REMARK 3 S21: 0.3108 S22: 0.1598 S23: -0.4906 REMARK 3 S31: -1.2537 S32: -0.5929 S33: -0.6637 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BH5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-OCT-22. REMARK 100 THE DEPOSITION ID IS D_1292126359. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-MAY-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38493 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.380 REMARK 200 RESOLUTION RANGE LOW (A) : 55.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.24000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.38 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 7ZXU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CITRATE TRIBASIC REMARK 280 DEHYDRATE, PH 5.5, 18% W/V POLYETHYLENE GLYCOL 3,350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 93.42300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.99350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 93.42300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 49.99350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10960 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, E, C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER H 134 REMARK 465 THR H 135 REMARK 465 ASP H 221 REMARK 465 LYS H 222 REMARK 465 CYS L 214 REMARK 465 HIS E 327 REMARK 465 HIS E 328 REMARK 465 HIS E 329 REMARK 465 HIS E 330 REMARK 465 HIS E 331 REMARK 465 HIS E 332 REMARK 465 LEU E 518 REMARK 465 HIS E 519 REMARK 465 ALA E 520 REMARK 465 PRO E 521 REMARK 465 ALA E 522 REMARK 465 THR E 523 REMARK 465 GLY E 526 REMARK 465 LYS E 527 REMARK 465 LYS E 528 REMARK 465 LYS C 125 REMARK 465 HIS C 126 REMARK 465 HIS C 127 REMARK 465 HIS C 128 REMARK 465 HIS C 129 REMARK 465 HIS C 130 REMARK 465 HIS C 131 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS H 133 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL H 100 -90.48 56.31 REMARK 500 ASP H 148 67.37 63.16 REMARK 500 THR L 52 -51.06 66.03 REMARK 500 ASN L 138 75.84 56.00 REMARK 500 ALA E 352 53.88 -111.02 REMARK 500 PRO E 373 -9.39 -57.72 REMARK 500 PHE E 377 85.12 -151.72 REMARK 500 ASN E 422 -60.20 -127.74 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BH5 H 1 222 PDB 8BH5 8BH5 1 222 DBREF 8BH5 L 1 214 PDB 8BH5 8BH5 1 214 DBREF 8BH5 E 333 528 UNP P0DTC2 SPIKE_SARS2 333 528 DBREF 8BH5 C 1 131 PDB 8BH5 8BH5 1 131 SEQADV 8BH5 HIS E 327 UNP P0DTC2 EXPRESSION TAG SEQADV 8BH5 HIS E 328 UNP P0DTC2 EXPRESSION TAG SEQADV 8BH5 HIS E 329 UNP P0DTC2 EXPRESSION TAG SEQADV 8BH5 HIS E 330 UNP P0DTC2 EXPRESSION TAG SEQADV 8BH5 HIS E 331 UNP P0DTC2 EXPRESSION TAG SEQADV 8BH5 HIS E 332 UNP P0DTC2 EXPRESSION TAG SEQADV 8BH5 ASP E 339 UNP P0DTC2 GLY 339 VARIANT SEQADV 8BH5 PHE E 371 UNP P0DTC2 SER 371 VARIANT SEQADV 8BH5 PRO E 373 UNP P0DTC2 SER 373 ENGINEERED MUTATION SEQADV 8BH5 PHE E 375 UNP P0DTC2 SER 375 VARIANT SEQADV 8BH5 ALA E 376 UNP P0DTC2 THR 376 VARIANT SEQADV 8BH5 ASN E 405 UNP P0DTC2 ASP 405 VARIANT SEQADV 8BH5 SER E 408 UNP P0DTC2 ARG 408 VARIANT SEQADV 8BH5 ASN E 417 UNP P0DTC2 LYS 417 VARIANT SEQADV 8BH5 LYS E 440 UNP P0DTC2 ASN 440 VARIANT SEQADV 8BH5 GLN E 452 UNP P0DTC2 LEU 452 VARIANT SEQADV 8BH5 ASN E 477 UNP P0DTC2 SER 477 VARIANT SEQADV 8BH5 LYS E 478 UNP P0DTC2 THR 478 VARIANT SEQADV 8BH5 ALA E 484 UNP P0DTC2 GLU 484 VARIANT SEQADV 8BH5 ARG E 493 UNP P0DTC2 GLN 493 VARIANT SEQADV 8BH5 ARG E 498 UNP P0DTC2 GLN 498 VARIANT SEQADV 8BH5 TYR E 501 UNP P0DTC2 ASN 501 VARIANT SEQADV 8BH5 HIS E 505 UNP P0DTC2 TYR 505 VARIANT SEQADV 8BH5 LYS E 527 UNP P0DTC2 PRO 527 ENGINEERED MUTATION SEQRES 1 H 222 GLU VAL GLN LEU LEU GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 H 222 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 H 222 LEU THR VAL ARG SER ASN TYR MET ASN TRP VAL ARG GLN SEQRES 4 H 222 ALA PRO GLY LYS GLY LEU GLU TRP VAL SER LEU ILE TYR SEQRES 5 H 222 SER GLY GLY SER THR PHE TYR ALA ASP SER VAL LYS GLY SEQRES 6 H 222 ARG PHE THR ILE SER ARG HIS ASP SER LYS ASN THR LEU SEQRES 7 H 222 TYR LEU GLN MET ASN SER LEU ARG ALA GLU ASP THR ALA SEQRES 8 H 222 VAL TYR TYR CYS ALA ARG ASP LEU VAL VAL TYR GLY MET SEQRES 9 H 222 ASP VAL TRP GLY GLN GLY THR THR VAL THR VAL SER SER SEQRES 10 H 222 ALA SER THR LYS GLY PRO SER VAL PHE PRO LEU ALA PRO SEQRES 11 H 222 SER SER LYS SER THR SER GLY GLY THR ALA ALA LEU GLY SEQRES 12 H 222 CYS LEU VAL LYS ASP TYR PHE PRO GLU PRO VAL THR VAL SEQRES 13 H 222 SER TRP ASN SER GLY ALA LEU THR SER GLY VAL HIS THR SEQRES 14 H 222 PHE PRO ALA VAL LEU GLN SER SER GLY LEU TYR SER LEU SEQRES 15 H 222 SER SER VAL VAL THR VAL PRO SER SER SER LEU GLY THR SEQRES 16 H 222 GLN THR TYR ILE CYS ASN VAL ASN HIS LYS PRO SER ASN SEQRES 17 H 222 THR LYS VAL ASP LYS LYS VAL GLU PRO LYS SER CYS ASP SEQRES 18 H 222 LYS SEQRES 1 L 214 ASP ILE GLN MET THR GLN SER PRO GLY THR LEU SER LEU SEQRES 2 L 214 SER PRO GLY GLU ARG ALA THR LEU SER CYS ARG ALA SER SEQRES 3 L 214 GLN SER VAL SER SER SER SER LEU ALA TRP TYR GLN GLN SEQRES 4 L 214 LYS HIS GLY GLN ALA PRO ARG LEU LEU ILE TYR GLY THR SEQRES 5 L 214 SER SER ARG ALA THR GLY ILE PRO ASP ARG PHE SER GLY SEQRES 6 L 214 SER GLY SER GLY THR ASP PHE THR LEU THR ILE SER GLY SEQRES 7 L 214 LEU GLU PRO GLU ASP PHE ALA VAL TYR TYR CYS GLN GLN SEQRES 8 L 214 TYR GLY SER SER PRO LEU PHE GLY GLY GLY THR LYS VAL SEQRES 9 L 214 GLU ILE LYS ARG THR VAL ALA ALA PRO SER VAL PHE ILE SEQRES 10 L 214 PHE PRO PRO SER ASP GLU GLN LEU LYS SER GLY THR ALA SEQRES 11 L 214 SER VAL VAL CYS LEU LEU ASN ASN PHE TYR PRO ARG GLU SEQRES 12 L 214 ALA LYS VAL GLN TRP LYS VAL ASP ASN ALA LEU GLN SER SEQRES 13 L 214 GLY ASN SER GLN GLU SER VAL THR GLU GLN ASP SER LYS SEQRES 14 L 214 ASP SER THR TYR SER LEU SER SER THR LEU THR LEU SER SEQRES 15 L 214 LYS ALA ASP TYR GLU LYS HIS LYS VAL TYR ALA CYS GLU SEQRES 16 L 214 VAL THR HIS GLN GLY LEU SER SER PRO VAL THR LYS SER SEQRES 17 L 214 PHE ASN ARG GLY GLU CYS SEQRES 1 E 202 HIS HIS HIS HIS HIS HIS THR ASN LEU CYS PRO PHE ASP SEQRES 2 E 202 GLU VAL PHE ASN ALA THR ARG PHE ALA SER VAL TYR ALA SEQRES 3 E 202 TRP ASN ARG LYS ARG ILE SER ASN CYS VAL ALA ASP TYR SEQRES 4 E 202 SER VAL LEU TYR ASN PHE ALA PRO PHE PHE ALA PHE LYS SEQRES 5 E 202 CYS TYR GLY VAL SER PRO THR LYS LEU ASN ASP LEU CYS SEQRES 6 E 202 PHE THR ASN VAL TYR ALA ASP SER PHE VAL ILE ARG GLY SEQRES 7 E 202 ASN GLU VAL SER GLN ILE ALA PRO GLY GLN THR GLY ASN SEQRES 8 E 202 ILE ALA ASP TYR ASN TYR LYS LEU PRO ASP ASP PHE THR SEQRES 9 E 202 GLY CYS VAL ILE ALA TRP ASN SER ASN LYS LEU ASP SER SEQRES 10 E 202 LYS VAL GLY GLY ASN TYR ASN TYR GLN TYR ARG LEU PHE SEQRES 11 E 202 ARG LYS SER ASN LEU LYS PRO PHE GLU ARG ASP ILE SER SEQRES 12 E 202 THR GLU ILE TYR GLN ALA GLY ASN LYS PRO CYS ASN GLY SEQRES 13 E 202 VAL ALA GLY PHE ASN CYS TYR PHE PRO LEU ARG SER TYR SEQRES 14 E 202 GLY PHE ARG PRO THR TYR GLY VAL GLY HIS GLN PRO TYR SEQRES 15 E 202 ARG VAL VAL VAL LEU SER PHE GLU LEU LEU HIS ALA PRO SEQRES 16 E 202 ALA THR VAL CYS GLY LYS LYS SEQRES 1 C 131 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY LEU VAL GLN SEQRES 2 C 131 PRO GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 131 PHE THR ASN ASP PHE TYR SER ILE ALA TRP PHE ARG GLN SEQRES 4 C 131 ALA PRO GLY LYS GLU ARG GLU GLY VAL SER TRP LEU SER SEQRES 5 C 131 VAL SER ASP ASN THR PRO THR TYR VAL ASP SER VAL LYS SEQRES 6 C 131 ASP ARG PHE THR ILE SER ARG HIS ASN ALA ASN ASN THR SEQRES 7 C 131 VAL TYR LEU GLN MET ASN MET LEU LYS PRO GLU ASP THR SEQRES 8 C 131 ALA ILE TYR TYR CYS ALA ALA GLY ARG PHE ALA GLY ARG SEQRES 9 C 131 ASP THR TRP PRO SER SER TYR ASP TYR TRP GLY GLN GLY SEQRES 10 C 131 THR GLN VAL THR VAL SER SER LYS HIS HIS HIS HIS HIS SEQRES 11 C 131 HIS HET NAG A 1 14 HET FUC A 2 10 HET GOL H 301 6 HET GOL H 302 6 HET GOL H 303 6 HET GOL H 304 6 HET PO4 H 305 5 HET GOL L 401 6 HET GOL L 402 6 HET GOL L 403 6 HET GOL E 701 6 HET GOL E 702 6 HET GOL E 703 6 HET GOL E 704 6 HET GOL C 201 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM GOL GLYCEROL HETNAM PO4 PHOSPHATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 NAG C8 H15 N O6 FORMUL 5 FUC C6 H12 O5 FORMUL 6 GOL 12(C3 H8 O3) FORMUL 10 PO4 O4 P 3- FORMUL 19 HOH *158(H2 O) HELIX 1 AA1 THR H 28 ASN H 32 5 5 HELIX 2 AA2 ARG H 86 THR H 90 5 5 HELIX 3 AA3 LEU H 99 GLY H 103 5 5 HELIX 4 AA4 SER H 191 GLY H 194 5 4 HELIX 5 AA5 LYS H 205 ASN H 208 5 4 HELIX 6 AA6 SER L 30 SER L 32 5 3 HELIX 7 AA7 GLU L 80 PHE L 84 5 5 HELIX 8 AA8 SER L 121 LYS L 126 1 6 HELIX 9 AA9 LYS L 183 LYS L 188 1 6 HELIX 10 AB1 PRO E 337 ASN E 343 1 7 HELIX 11 AB2 SER E 349 TRP E 353 5 5 HELIX 12 AB3 ASP E 364 ASN E 370 1 7 HELIX 13 AB4 SER E 383 LEU E 390 5 8 HELIX 14 AB5 ASN E 405 ILE E 410 5 6 HELIX 15 AB6 GLY E 416 ASN E 422 1 7 HELIX 16 AB7 SER E 438 SER E 443 1 6 HELIX 17 AB8 ASP C 62 LYS C 65 5 4 HELIX 18 AB9 LYS C 87 THR C 91 5 5 HELIX 19 AC1 TRP C 107 TYR C 111 5 5 SHEET 1 AA1 4 GLN H 3 SER H 7 0 SHEET 2 AA1 4 LEU H 18 SER H 25 -1 O ALA H 23 N LEU H 5 SHEET 3 AA1 4 THR H 77 MET H 82 -1 O MET H 82 N LEU H 18 SHEET 4 AA1 4 PHE H 67 HIS H 72 -1 N THR H 68 O GLN H 81 SHEET 1 AA2 6 LEU H 11 VAL H 12 0 SHEET 2 AA2 6 THR H 111 VAL H 115 1 O THR H 114 N VAL H 12 SHEET 3 AA2 6 ALA H 91 ASP H 98 -1 N ALA H 91 O VAL H 113 SHEET 4 AA2 6 TYR H 33 GLN H 39 -1 N VAL H 37 O TYR H 94 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O VAL H 48 N TRP H 36 SHEET 6 AA2 6 THR H 57 TYR H 59 -1 O PHE H 58 N LEU H 50 SHEET 1 AA3 4 LEU H 11 VAL H 12 0 SHEET 2 AA3 4 THR H 111 VAL H 115 1 O THR H 114 N VAL H 12 SHEET 3 AA3 4 ALA H 91 ASP H 98 -1 N ALA H 91 O VAL H 113 SHEET 4 AA3 4 VAL H 106 TRP H 107 -1 O VAL H 106 N ARG H 97 SHEET 1 AA4 4 SER H 124 LEU H 128 0 SHEET 2 AA4 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA4 4 TYR H 180 PRO H 189 -1 O VAL H 188 N ALA H 140 SHEET 4 AA4 4 VAL H 167 THR H 169 -1 N HIS H 168 O VAL H 185 SHEET 1 AA5 4 SER H 124 LEU H 128 0 SHEET 2 AA5 4 THR H 139 TYR H 149 -1 O LEU H 145 N PHE H 126 SHEET 3 AA5 4 TYR H 180 PRO H 189 -1 O VAL H 188 N ALA H 140 SHEET 4 AA5 4 VAL H 173 LEU H 174 -1 N VAL H 173 O SER H 181 SHEET 1 AA6 3 THR H 155 TRP H 158 0 SHEET 2 AA6 3 TYR H 198 HIS H 204 -1 O ASN H 201 N SER H 157 SHEET 3 AA6 3 THR H 209 VAL H 215 -1 O VAL H 215 N TYR H 198 SHEET 1 AA7 3 MET L 4 SER L 7 0 SHEET 2 AA7 3 ARG L 18 VAL L 29 -1 O ARG L 24 N THR L 5 SHEET 3 AA7 3 PHE L 63 SER L 77 -1 O THR L 70 N ALA L 25 SHEET 1 AA8 6 THR L 10 LEU L 13 0 SHEET 2 AA8 6 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AA8 6 VAL L 86 TYR L 92 -1 N TYR L 87 O THR L 102 SHEET 4 AA8 6 LEU L 34 GLN L 39 -1 N TYR L 37 O TYR L 88 SHEET 5 AA8 6 ARG L 46 TYR L 50 -1 O ILE L 49 N TRP L 36 SHEET 6 AA8 6 SER L 54 ARG L 55 -1 O SER L 54 N TYR L 50 SHEET 1 AA9 4 THR L 10 LEU L 13 0 SHEET 2 AA9 4 THR L 102 ILE L 106 1 O LYS L 103 N LEU L 11 SHEET 3 AA9 4 VAL L 86 TYR L 92 -1 N TYR L 87 O THR L 102 SHEET 4 AA9 4 PRO L 96 PHE L 98 -1 O LEU L 97 N GLN L 91 SHEET 1 AB1 4 SER L 114 PHE L 118 0 SHEET 2 AB1 4 THR L 129 PHE L 139 -1 O LEU L 135 N PHE L 116 SHEET 3 AB1 4 TYR L 173 SER L 182 -1 O LEU L 179 N VAL L 132 SHEET 4 AB1 4 SER L 159 VAL L 163 -1 N SER L 162 O SER L 176 SHEET 1 AB2 4 ALA L 153 GLN L 155 0 SHEET 2 AB2 4 ALA L 144 VAL L 150 -1 N TRP L 148 O GLN L 155 SHEET 3 AB2 4 VAL L 191 HIS L 198 -1 O GLU L 195 N GLN L 147 SHEET 4 AB2 4 VAL L 205 ASN L 210 -1 O VAL L 205 N VAL L 196 SHEET 1 AB3 6 ASN E 354 ILE E 358 0 SHEET 2 AB3 6 ASN E 394 ARG E 403 -1 O VAL E 395 N ILE E 358 SHEET 3 AB3 6 PRO E 507 GLU E 516 -1 O VAL E 512 N ASP E 398 SHEET 4 AB3 6 GLY E 431 ASN E 437 -1 N ILE E 434 O VAL E 511 SHEET 5 AB3 6 ALA E 376 TYR E 380 -1 N LYS E 378 O VAL E 433 SHEET 6 AB3 6 ALA C 102 ARG C 104 -1 O ARG C 104 N PHE E 377 SHEET 1 AB4 2 GLN E 452 ARG E 454 0 SHEET 2 AB4 2 LEU E 492 SER E 494 -1 O ARG E 493 N TYR E 453 SHEET 1 AB5 2 TYR E 473 GLN E 474 0 SHEET 2 AB5 2 CYS E 488 TYR E 489 -1 O TYR E 489 N TYR E 473 SHEET 1 AB6 4 GLN C 3 SER C 7 0 SHEET 2 AB6 4 LEU C 18 SER C 25 -1 O ALA C 23 N VAL C 5 SHEET 3 AB6 4 THR C 78 MET C 83 -1 O LEU C 81 N LEU C 20 SHEET 4 AB6 4 PHE C 68 HIS C 73 -1 N SER C 71 O TYR C 80 SHEET 1 AB7 6 GLY C 10 VAL C 12 0 SHEET 2 AB7 6 THR C 118 VAL C 122 1 O THR C 121 N GLY C 10 SHEET 3 AB7 6 ALA C 92 GLY C 99 -1 N TYR C 94 O THR C 118 SHEET 4 AB7 6 SER C 33 GLN C 39 -1 N PHE C 37 O TYR C 95 SHEET 5 AB7 6 ARG C 45 SER C 52 -1 O LEU C 51 N ILE C 34 SHEET 6 AB7 6 THR C 57 TYR C 60 -1 O THR C 59 N TRP C 50 SHEET 1 AB8 4 GLY C 10 VAL C 12 0 SHEET 2 AB8 4 THR C 118 VAL C 122 1 O THR C 121 N GLY C 10 SHEET 3 AB8 4 ALA C 92 GLY C 99 -1 N TYR C 94 O THR C 118 SHEET 4 AB8 4 TYR C 113 TRP C 114 -1 O TYR C 113 N ALA C 98 SSBOND 1 CYS H 22 CYS H 95 1555 1555 2.03 SSBOND 2 CYS H 144 CYS H 200 1555 1555 2.03 SSBOND 3 CYS L 23 CYS L 89 1555 1555 2.04 SSBOND 4 CYS L 134 CYS L 194 1555 1555 2.04 SSBOND 5 CYS E 336 CYS E 361 1555 1555 2.03 SSBOND 6 CYS E 379 CYS E 432 1555 1555 2.03 SSBOND 7 CYS E 391 CYS E 525 1555 1555 2.03 SSBOND 8 CYS E 480 CYS E 488 1555 1555 2.03 SSBOND 9 CYS C 22 CYS C 96 1555 1555 2.03 LINK ND2 ASN E 343 C1 NAG A 1 1555 1555 1.44 LINK O6 NAG A 1 C1 FUC A 2 1555 1555 1.44 CISPEP 1 PHE H 150 PRO H 151 0 -3.53 CISPEP 2 GLU H 152 PRO H 153 0 -1.45 CISPEP 3 SER L 7 PRO L 8 0 -2.70 CISPEP 4 TYR L 140 PRO L 141 0 2.77 CRYST1 186.846 99.987 56.486 90.00 104.11 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005352 0.000000 0.001345 0.00000 SCALE2 0.000000 0.010001 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018254 0.00000