HEADER HYDROLASE 10-NOV-22 8BM3 TITLE H207A MUTANT OF E. COLI PGPB, A PAP2 TYPE PHOSPHATIDYL GLYCEROL TITLE 2 PHOSPHATE AND C55-PP PHOSPHATASE, IN COMPLEX WITH FARNESYL TITLE 3 PYROPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHATIDYLGLYCEROPHOSPHATASE B; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DIACYLGLYCEROL PYROPHOSPHATE PHOSPHATASE,DGPP PHOSPHATASE, COMPND 5 PHOSPHATIDATE PHOSPHATASE,UNDECAPRENYL PYROPHOSPHATE PHOSPHATASE, COMPND 6 UNDECAPRENYL-DIPHOSPHATASE; COMPND 7 EC: 3.1.3.27,3.1.3.81,3.1.3.4,3.6.1.27; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: PGPB, B1278, JW1270; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS C15-PP, PGP PHOSPHATASE, LIPID METABOLISM, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.DELBRASSINE,M.EL GHACHI,A.LAMBION,R.HERMAN,F.KERFF REVDAT 1 22-NOV-23 8BM3 0 JRNL AUTH F.DELBRASSINE,M.EL GHACHI,A.LAMBION,R.HERMAN,F.KERFF JRNL TITL H207A MUTANT OF E. COLI PGPB, A PAP2 TYPE PHOSPHATIDYL JRNL TITL 2 GLYCEROL PHOSPHATE AND C55-PP PHOSPHATASE, IN COMPLEX WITH JRNL TITL 3 FARNESYL PYROPHOSPHATE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.77 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 3 NUMBER OF REFLECTIONS : 19616 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.273 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 981 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.69 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.27 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2845 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2396 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2703 REMARK 3 BIN R VALUE (WORKING SET) : 0.2357 REMARK 3 BIN FREE R VALUE : 0.3136 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.99 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 142 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7712 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 113.4 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 16.47240 REMARK 3 B22 (A**2) : -8.58970 REMARK 3 B33 (A**2) : -7.88260 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.41720 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.590 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.585 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.875 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.863 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 8056 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 11012 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2660 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL REMARK 3 GENERAL PLANES : 1276 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 8056 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 1016 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 10204 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.09 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.38 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 21.53 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 30.3049 88.7194 172.1282 REMARK 3 T TENSOR REMARK 3 T11: -0.0247 T22: 0.3487 REMARK 3 T33: -0.4290 T12: -0.1085 REMARK 3 T13: 0.1564 T23: 0.0149 REMARK 3 L TENSOR REMARK 3 L11: 4.0169 L22: 2.5523 REMARK 3 L33: 2.6524 L12: -0.8303 REMARK 3 L13: 1.1203 L23: 0.3721 REMARK 3 S TENSOR REMARK 3 S11: 0.0617 S12: 0.4905 S13: 0.1261 REMARK 3 S21: -0.2668 S22: -0.0839 S23: -0.1636 REMARK 3 S31: -0.2077 S32: 0.0391 S33: 0.0222 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 74.6546 91.1753 188.4623 REMARK 3 T TENSOR REMARK 3 T11: -0.0796 T22: 0.3490 REMARK 3 T33: -0.3672 T12: 0.0480 REMARK 3 T13: 0.0376 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 3.1484 L22: 2.7498 REMARK 3 L33: 3.9441 L12: 0.6510 REMARK 3 L13: -0.6816 L23: -0.2598 REMARK 3 S TENSOR REMARK 3 S11: 0.0484 S12: -0.5570 S13: -0.0881 REMARK 3 S21: 0.2009 S22: -0.0505 S23: -0.1733 REMARK 3 S31: 0.1058 S32: -0.0288 S33: 0.0022 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): 54.3236 66.5522 171.1465 REMARK 3 T TENSOR REMARK 3 T11: -0.0356 T22: 0.3161 REMARK 3 T33: -0.4248 T12: 0.0816 REMARK 3 T13: 0.0868 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 4.8992 L22: 1.4859 REMARK 3 L33: 4.3800 L12: 0.7980 REMARK 3 L13: 0.8978 L23: 0.8995 REMARK 3 S TENSOR REMARK 3 S11: 0.0840 S12: 0.2048 S13: -0.5173 REMARK 3 S21: -0.1991 S22: -0.0416 S23: -0.2297 REMARK 3 S31: 0.6202 S32: 0.1609 S33: -0.0424 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): 9.9530 113.3670 189.4243 REMARK 3 T TENSOR REMARK 3 T11: 0.0462 T22: 0.1662 REMARK 3 T33: -0.3912 T12: -0.1383 REMARK 3 T13: 0.0189 T23: -0.0730 REMARK 3 L TENSOR REMARK 3 L11: 5.6949 L22: 1.4786 REMARK 3 L33: 3.2278 L12: -0.3207 REMARK 3 L13: -1.2888 L23: 0.2121 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: -0.5894 S13: 0.5827 REMARK 3 S21: 0.2794 S22: 0.1190 S23: -0.2026 REMARK 3 S31: -0.5804 S32: 0.2010 S33: -0.0956 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BM3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 10-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292126640. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978570 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19616 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 47.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.8200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.51 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.020 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6JWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.24 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL PH 7, AMMONIUM SULFATE 2,77 REMARK 280 M, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -1 REMARK 465 ALA A 0 REMARK 465 PRO A 240 REMARK 465 ALA A 241 REMARK 465 GLU A 242 REMARK 465 GLU A 243 REMARK 465 ASN A 244 REMARK 465 ARG A 245 REMARK 465 GLU A 246 REMARK 465 ILE A 247 REMARK 465 ALA A 248 REMARK 465 GLN A 249 REMARK 465 ARG A 250 REMARK 465 GLU A 251 REMARK 465 GLN A 252 REMARK 465 GLU A 253 REMARK 465 SER A 254 REMARK 465 ARG A 255 REMARK 465 SER A 256 REMARK 465 HIS A 257 REMARK 465 HIS A 258 REMARK 465 HIS A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 MET B -1 REMARK 465 ALA B 0 REMARK 465 PRO B 240 REMARK 465 ALA B 241 REMARK 465 GLU B 242 REMARK 465 GLU B 243 REMARK 465 ASN B 244 REMARK 465 ARG B 245 REMARK 465 GLU B 246 REMARK 465 ILE B 247 REMARK 465 ALA B 248 REMARK 465 GLN B 249 REMARK 465 ARG B 250 REMARK 465 GLU B 251 REMARK 465 GLN B 252 REMARK 465 GLU B 253 REMARK 465 SER B 254 REMARK 465 ARG B 255 REMARK 465 SER B 256 REMARK 465 HIS B 257 REMARK 465 HIS B 258 REMARK 465 HIS B 259 REMARK 465 HIS B 260 REMARK 465 HIS B 261 REMARK 465 HIS B 262 REMARK 465 MET C -1 REMARK 465 ALA C 0 REMARK 465 PRO C 240 REMARK 465 ALA C 241 REMARK 465 GLU C 242 REMARK 465 GLU C 243 REMARK 465 ASN C 244 REMARK 465 ARG C 245 REMARK 465 GLU C 246 REMARK 465 ILE C 247 REMARK 465 ALA C 248 REMARK 465 GLN C 249 REMARK 465 ARG C 250 REMARK 465 GLU C 251 REMARK 465 GLN C 252 REMARK 465 GLU C 253 REMARK 465 SER C 254 REMARK 465 ARG C 255 REMARK 465 SER C 256 REMARK 465 HIS C 257 REMARK 465 HIS C 258 REMARK 465 HIS C 259 REMARK 465 HIS C 260 REMARK 465 HIS C 261 REMARK 465 HIS C 262 REMARK 465 MET D -1 REMARK 465 ALA D 0 REMARK 465 PRO D 240 REMARK 465 ALA D 241 REMARK 465 GLU D 242 REMARK 465 GLU D 243 REMARK 465 ASN D 244 REMARK 465 ARG D 245 REMARK 465 GLU D 246 REMARK 465 ILE D 247 REMARK 465 ALA D 248 REMARK 465 GLN D 249 REMARK 465 ARG D 250 REMARK 465 GLU D 251 REMARK 465 GLN D 252 REMARK 465 GLU D 253 REMARK 465 SER D 254 REMARK 465 ARG D 255 REMARK 465 SER D 256 REMARK 465 HIS D 257 REMARK 465 HIS D 258 REMARK 465 HIS D 259 REMARK 465 HIS D 260 REMARK 465 HIS D 261 REMARK 465 HIS D 262 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 33 -169.74 -58.88 REMARK 500 GLN A 34 97.74 -56.76 REMARK 500 TRP A 95 21.08 -74.64 REMARK 500 ILE A 96 -55.90 -122.43 REMARK 500 LYS A 141 -16.19 63.73 REMARK 500 GLU A 154 -70.45 -75.76 REMARK 500 THR A 155 -162.76 48.04 REMARK 500 THR A 164 2.86 -68.72 REMARK 500 GLU B 33 -170.12 -58.91 REMARK 500 GLN B 34 98.71 -57.15 REMARK 500 ILE B 96 -52.88 -123.16 REMARK 500 LYS B 141 -16.18 63.73 REMARK 500 THR B 155 -149.75 39.29 REMARK 500 GLU C 33 -170.71 -58.27 REMARK 500 GLN C 34 98.90 -57.11 REMARK 500 ILE C 96 -55.45 -123.02 REMARK 500 LYS C 141 -15.72 63.56 REMARK 500 THR C 155 -148.52 41.30 REMARK 500 GLU D 33 -170.03 -58.68 REMARK 500 GLN D 34 98.84 -57.71 REMARK 500 ILE D 96 -52.43 -122.58 REMARK 500 LYS D 141 -15.98 63.77 REMARK 500 THR D 155 -126.28 38.54 REMARK 500 PHE D 166 -63.74 -101.76 REMARK 500 LEU D 177 -30.10 -132.01 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BM3 A 1 254 UNP P0A924 PGPB_ECOLI 1 254 DBREF 8BM3 B 1 254 UNP P0A924 PGPB_ECOLI 1 254 DBREF 8BM3 C 1 254 UNP P0A924 PGPB_ECOLI 1 254 DBREF 8BM3 D 1 254 UNP P0A924 PGPB_ECOLI 1 254 SEQADV 8BM3 MET A -1 UNP P0A924 INITIATING METHIONINE SEQADV 8BM3 ALA A 0 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 ALA A 207 UNP P0A924 HIS 207 ENGINEERED MUTATION SEQADV 8BM3 ARG A 255 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 SER A 256 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS A 257 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS A 258 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS A 259 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS A 260 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS A 261 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS A 262 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 MET B -1 UNP P0A924 INITIATING METHIONINE SEQADV 8BM3 ALA B 0 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 ALA B 207 UNP P0A924 HIS 207 ENGINEERED MUTATION SEQADV 8BM3 ARG B 255 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 SER B 256 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS B 257 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS B 258 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS B 259 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS B 260 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS B 261 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS B 262 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 MET C -1 UNP P0A924 INITIATING METHIONINE SEQADV 8BM3 ALA C 0 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 ALA C 207 UNP P0A924 HIS 207 ENGINEERED MUTATION SEQADV 8BM3 ARG C 255 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 SER C 256 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS C 257 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS C 258 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS C 259 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS C 260 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS C 261 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS C 262 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 MET D -1 UNP P0A924 INITIATING METHIONINE SEQADV 8BM3 ALA D 0 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 ALA D 207 UNP P0A924 HIS 207 ENGINEERED MUTATION SEQADV 8BM3 ARG D 255 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 SER D 256 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS D 257 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS D 258 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS D 259 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS D 260 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS D 261 UNP P0A924 EXPRESSION TAG SEQADV 8BM3 HIS D 262 UNP P0A924 EXPRESSION TAG SEQRES 1 A 264 MET ALA MET ARG SER ILE ALA ARG ARG THR ALA VAL GLY SEQRES 2 A 264 ALA ALA LEU LEU LEU VAL MET PRO VAL ALA VAL TRP ILE SEQRES 3 A 264 SER GLY TRP ARG TRP GLN PRO GLY GLU GLN SER TRP LEU SEQRES 4 A 264 LEU LYS ALA ALA PHE TRP VAL THR GLU THR VAL THR GLN SEQRES 5 A 264 PRO TRP GLY VAL ILE THR HIS LEU ILE LEU PHE GLY TRP SEQRES 6 A 264 PHE LEU TRP CYS LEU ARG PHE ARG ILE LYS ALA ALA PHE SEQRES 7 A 264 VAL LEU PHE ALA ILE LEU ALA ALA ALA ILE LEU VAL GLY SEQRES 8 A 264 GLN GLY VAL LYS SER TRP ILE LYS ASP LYS VAL GLN GLU SEQRES 9 A 264 PRO ARG PRO PHE VAL ILE TRP LEU GLU LYS THR HIS HIS SEQRES 10 A 264 ILE PRO VAL ASP GLU PHE TYR THR LEU LYS ARG ALA GLU SEQRES 11 A 264 ARG GLY ASN LEU VAL LYS GLU GLN LEU ALA GLU GLU LYS SEQRES 12 A 264 ASN ILE PRO GLN TYR LEU ARG SER HIS TRP GLN LYS GLU SEQRES 13 A 264 THR GLY PHE ALA PHE PRO SER GLY HIS THR MET PHE ALA SEQRES 14 A 264 ALA SER TRP ALA LEU LEU ALA VAL GLY LEU LEU TRP PRO SEQRES 15 A 264 ARG ARG ARG THR LEU THR ILE ALA ILE LEU LEU VAL TRP SEQRES 16 A 264 ALA THR GLY VAL MET GLY SER ARG LEU LEU LEU GLY MET SEQRES 17 A 264 ALA TRP PRO ARG ASP LEU VAL VAL ALA THR LEU ILE SER SEQRES 18 A 264 TRP ALA LEU VAL ALA VAL ALA THR TRP LEU ALA GLN ARG SEQRES 19 A 264 ILE CYS GLY PRO LEU THR PRO PRO ALA GLU GLU ASN ARG SEQRES 20 A 264 GLU ILE ALA GLN ARG GLU GLN GLU SER ARG SER HIS HIS SEQRES 21 A 264 HIS HIS HIS HIS SEQRES 1 B 264 MET ALA MET ARG SER ILE ALA ARG ARG THR ALA VAL GLY SEQRES 2 B 264 ALA ALA LEU LEU LEU VAL MET PRO VAL ALA VAL TRP ILE SEQRES 3 B 264 SER GLY TRP ARG TRP GLN PRO GLY GLU GLN SER TRP LEU SEQRES 4 B 264 LEU LYS ALA ALA PHE TRP VAL THR GLU THR VAL THR GLN SEQRES 5 B 264 PRO TRP GLY VAL ILE THR HIS LEU ILE LEU PHE GLY TRP SEQRES 6 B 264 PHE LEU TRP CYS LEU ARG PHE ARG ILE LYS ALA ALA PHE SEQRES 7 B 264 VAL LEU PHE ALA ILE LEU ALA ALA ALA ILE LEU VAL GLY SEQRES 8 B 264 GLN GLY VAL LYS SER TRP ILE LYS ASP LYS VAL GLN GLU SEQRES 9 B 264 PRO ARG PRO PHE VAL ILE TRP LEU GLU LYS THR HIS HIS SEQRES 10 B 264 ILE PRO VAL ASP GLU PHE TYR THR LEU LYS ARG ALA GLU SEQRES 11 B 264 ARG GLY ASN LEU VAL LYS GLU GLN LEU ALA GLU GLU LYS SEQRES 12 B 264 ASN ILE PRO GLN TYR LEU ARG SER HIS TRP GLN LYS GLU SEQRES 13 B 264 THR GLY PHE ALA PHE PRO SER GLY HIS THR MET PHE ALA SEQRES 14 B 264 ALA SER TRP ALA LEU LEU ALA VAL GLY LEU LEU TRP PRO SEQRES 15 B 264 ARG ARG ARG THR LEU THR ILE ALA ILE LEU LEU VAL TRP SEQRES 16 B 264 ALA THR GLY VAL MET GLY SER ARG LEU LEU LEU GLY MET SEQRES 17 B 264 ALA TRP PRO ARG ASP LEU VAL VAL ALA THR LEU ILE SER SEQRES 18 B 264 TRP ALA LEU VAL ALA VAL ALA THR TRP LEU ALA GLN ARG SEQRES 19 B 264 ILE CYS GLY PRO LEU THR PRO PRO ALA GLU GLU ASN ARG SEQRES 20 B 264 GLU ILE ALA GLN ARG GLU GLN GLU SER ARG SER HIS HIS SEQRES 21 B 264 HIS HIS HIS HIS SEQRES 1 C 264 MET ALA MET ARG SER ILE ALA ARG ARG THR ALA VAL GLY SEQRES 2 C 264 ALA ALA LEU LEU LEU VAL MET PRO VAL ALA VAL TRP ILE SEQRES 3 C 264 SER GLY TRP ARG TRP GLN PRO GLY GLU GLN SER TRP LEU SEQRES 4 C 264 LEU LYS ALA ALA PHE TRP VAL THR GLU THR VAL THR GLN SEQRES 5 C 264 PRO TRP GLY VAL ILE THR HIS LEU ILE LEU PHE GLY TRP SEQRES 6 C 264 PHE LEU TRP CYS LEU ARG PHE ARG ILE LYS ALA ALA PHE SEQRES 7 C 264 VAL LEU PHE ALA ILE LEU ALA ALA ALA ILE LEU VAL GLY SEQRES 8 C 264 GLN GLY VAL LYS SER TRP ILE LYS ASP LYS VAL GLN GLU SEQRES 9 C 264 PRO ARG PRO PHE VAL ILE TRP LEU GLU LYS THR HIS HIS SEQRES 10 C 264 ILE PRO VAL ASP GLU PHE TYR THR LEU LYS ARG ALA GLU SEQRES 11 C 264 ARG GLY ASN LEU VAL LYS GLU GLN LEU ALA GLU GLU LYS SEQRES 12 C 264 ASN ILE PRO GLN TYR LEU ARG SER HIS TRP GLN LYS GLU SEQRES 13 C 264 THR GLY PHE ALA PHE PRO SER GLY HIS THR MET PHE ALA SEQRES 14 C 264 ALA SER TRP ALA LEU LEU ALA VAL GLY LEU LEU TRP PRO SEQRES 15 C 264 ARG ARG ARG THR LEU THR ILE ALA ILE LEU LEU VAL TRP SEQRES 16 C 264 ALA THR GLY VAL MET GLY SER ARG LEU LEU LEU GLY MET SEQRES 17 C 264 ALA TRP PRO ARG ASP LEU VAL VAL ALA THR LEU ILE SER SEQRES 18 C 264 TRP ALA LEU VAL ALA VAL ALA THR TRP LEU ALA GLN ARG SEQRES 19 C 264 ILE CYS GLY PRO LEU THR PRO PRO ALA GLU GLU ASN ARG SEQRES 20 C 264 GLU ILE ALA GLN ARG GLU GLN GLU SER ARG SER HIS HIS SEQRES 21 C 264 HIS HIS HIS HIS SEQRES 1 D 264 MET ALA MET ARG SER ILE ALA ARG ARG THR ALA VAL GLY SEQRES 2 D 264 ALA ALA LEU LEU LEU VAL MET PRO VAL ALA VAL TRP ILE SEQRES 3 D 264 SER GLY TRP ARG TRP GLN PRO GLY GLU GLN SER TRP LEU SEQRES 4 D 264 LEU LYS ALA ALA PHE TRP VAL THR GLU THR VAL THR GLN SEQRES 5 D 264 PRO TRP GLY VAL ILE THR HIS LEU ILE LEU PHE GLY TRP SEQRES 6 D 264 PHE LEU TRP CYS LEU ARG PHE ARG ILE LYS ALA ALA PHE SEQRES 7 D 264 VAL LEU PHE ALA ILE LEU ALA ALA ALA ILE LEU VAL GLY SEQRES 8 D 264 GLN GLY VAL LYS SER TRP ILE LYS ASP LYS VAL GLN GLU SEQRES 9 D 264 PRO ARG PRO PHE VAL ILE TRP LEU GLU LYS THR HIS HIS SEQRES 10 D 264 ILE PRO VAL ASP GLU PHE TYR THR LEU LYS ARG ALA GLU SEQRES 11 D 264 ARG GLY ASN LEU VAL LYS GLU GLN LEU ALA GLU GLU LYS SEQRES 12 D 264 ASN ILE PRO GLN TYR LEU ARG SER HIS TRP GLN LYS GLU SEQRES 13 D 264 THR GLY PHE ALA PHE PRO SER GLY HIS THR MET PHE ALA SEQRES 14 D 264 ALA SER TRP ALA LEU LEU ALA VAL GLY LEU LEU TRP PRO SEQRES 15 D 264 ARG ARG ARG THR LEU THR ILE ALA ILE LEU LEU VAL TRP SEQRES 16 D 264 ALA THR GLY VAL MET GLY SER ARG LEU LEU LEU GLY MET SEQRES 17 D 264 ALA TRP PRO ARG ASP LEU VAL VAL ALA THR LEU ILE SER SEQRES 18 D 264 TRP ALA LEU VAL ALA VAL ALA THR TRP LEU ALA GLN ARG SEQRES 19 D 264 ILE CYS GLY PRO LEU THR PRO PRO ALA GLU GLU ASN ARG SEQRES 20 D 264 GLU ILE ALA GLN ARG GLU GLN GLU SER ARG SER HIS HIS SEQRES 21 D 264 HIS HIS HIS HIS HET FPP A 301 24 HET FPP B 301 24 HET FPP C 301 24 HET FPP D 301 24 HETNAM FPP FARNESYL DIPHOSPHATE FORMUL 5 FPP 4(C15 H28 O7 P2) HELIX 1 AA1 MET A 1 GLY A 26 1 26 HELIX 2 AA2 GLN A 34 THR A 47 1 14 HELIX 3 AA3 PRO A 51 ARG A 69 1 19 HELIX 4 AA4 ARG A 71 GLN A 101 1 31 HELIX 5 AA5 ARG A 104 HIS A 114 1 11 HELIX 6 AA6 PRO A 117 TYR A 122 1 6 HELIX 7 AA7 LYS A 125 ALA A 138 1 14 HELIX 8 AA8 PRO A 144 THR A 155 1 12 HELIX 9 AA9 GLY A 162 LEU A 178 1 17 HELIX 10 AB1 ARG A 183 LEU A 204 1 22 HELIX 11 AB2 TRP A 208 CYS A 234 1 27 HELIX 12 AB3 ARG B 2 GLY B 26 1 25 HELIX 13 AB4 GLN B 34 GLU B 46 1 13 HELIX 14 AB5 PRO B 51 ARG B 69 1 19 HELIX 15 AB6 ARG B 71 GLN B 101 1 31 HELIX 16 AB7 ARG B 104 HIS B 114 1 11 HELIX 17 AB8 PRO B 117 TYR B 122 1 6 HELIX 18 AB9 LYS B 125 ALA B 138 1 14 HELIX 19 AC1 PRO B 144 THR B 155 1 12 HELIX 20 AC2 GLY B 162 LEU B 178 1 17 HELIX 21 AC3 ARG B 183 LEU B 204 1 22 HELIX 22 AC4 TRP B 208 CYS B 234 1 27 HELIX 23 AC5 ARG C 2 GLY C 26 1 25 HELIX 24 AC6 GLN C 34 GLU C 46 1 13 HELIX 25 AC7 PRO C 51 ARG C 69 1 19 HELIX 26 AC8 ARG C 71 GLN C 101 1 31 HELIX 27 AC9 ARG C 104 HIS C 114 1 11 HELIX 28 AD1 PRO C 117 TYR C 122 1 6 HELIX 29 AD2 LYS C 125 ALA C 138 1 14 HELIX 30 AD3 PRO C 144 THR C 155 1 12 HELIX 31 AD4 HIS C 163 LEU C 178 1 16 HELIX 32 AD5 ARG C 183 LEU C 204 1 22 HELIX 33 AD6 TRP C 208 CYS C 234 1 27 HELIX 34 AD7 ARG D 2 GLY D 26 1 25 HELIX 35 AD8 GLN D 34 THR D 47 1 14 HELIX 36 AD9 PRO D 51 ARG D 69 1 19 HELIX 37 AE1 ARG D 71 GLN D 101 1 31 HELIX 38 AE2 ARG D 104 HIS D 114 1 11 HELIX 39 AE3 PRO D 117 TYR D 122 1 6 HELIX 40 AE4 LYS D 125 ALA D 138 1 14 HELIX 41 AE5 PRO D 144 THR D 155 1 12 HELIX 42 AE6 HIS D 163 LEU D 178 1 16 HELIX 43 AE7 ARG D 183 GLY D 205 1 23 HELIX 44 AE8 TRP D 208 CYS D 234 1 27 CISPEP 1 GLN A 50 PRO A 51 0 7.96 CISPEP 2 PHE A 159 PRO A 160 0 -4.84 CISPEP 3 GLN B 50 PRO B 51 0 6.52 CISPEP 4 PHE B 159 PRO B 160 0 -5.68 CISPEP 5 GLN C 50 PRO C 51 0 8.83 CISPEP 6 PHE C 159 PRO C 160 0 -7.19 CISPEP 7 GLN D 50 PRO D 51 0 8.00 CISPEP 8 PHE D 159 PRO D 160 0 -8.89 CRYST1 88.720 61.620 144.240 90.00 90.07 90.00 P 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011271 0.000000 0.000014 0.00000 SCALE2 0.000000 0.016228 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006933 0.00000