HEADER HYDROLASE 14-NOV-22 8BNV TITLE CRYSTAL STRUCTURE OF PIF1 FROM DEFERRIBACTER DESULFURICANS IN APO FROM COMPND MOL_ID: 1; COMPND 2 MOLECULE: AAA FAMILY ATPASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEFERRIBACTER DESULFURICANS; SOURCE 3 ORGANISM_TAXID: 197162; SOURCE 4 STRAIN: DSM 14783 / JCM 11476 / NBRC 101012 / SSM1; SOURCE 5 GENE: DEFDS_0256; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HELICASE THERMOPHILE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.RETY,W.F.CHEN,X.G.XI REVDAT 2 07-FEB-24 8BNV 1 REMARK REVDAT 1 08-MAR-23 8BNV 0 JRNL AUTH S.RETY,Y.ZHANG,W.FU,S.WANG,W.F.CHEN,X.G.XI JRNL TITL STRUCTURAL STUDIES OF PIF1 HELICASES FROM THERMOPHILIC JRNL TITL 2 BACTERIA. JRNL REF MICROORGANISMS V. 11 2023 JRNL REFN ESSN 2076-2607 JRNL PMID 36838444 JRNL DOI 10.3390/MICROORGANISMS11020479 REMARK 2 REMARK 2 RESOLUTION. 2.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 12119 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.248 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.340 REMARK 3 FREE R VALUE TEST SET COUNT : 647 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6400 - 4.8900 1.00 2369 154 0.1720 0.2177 REMARK 3 2 4.8900 - 3.8800 0.99 2295 124 0.1700 0.2100 REMARK 3 3 3.8800 - 3.3900 0.99 2256 145 0.2376 0.2627 REMARK 3 4 3.3900 - 3.0800 1.00 2265 132 0.2605 0.3112 REMARK 3 5 3.0800 - 2.8600 1.00 2287 92 0.3178 0.5171 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.447 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.459 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 72.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 93.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3146 REMARK 3 ANGLE : 0.948 4248 REMARK 3 CHIRALITY : 0.053 486 REMARK 3 PLANARITY : 0.006 532 REMARK 3 DIHEDRAL : 15.627 1182 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 177 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.2102 18.3384 -4.2011 REMARK 3 T TENSOR REMARK 3 T11: 0.2864 T22: 0.3432 REMARK 3 T33: 0.3951 T12: 0.0284 REMARK 3 T13: 0.0365 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 3.2920 L22: 4.9024 REMARK 3 L33: 8.2998 L12: 0.0236 REMARK 3 L13: -0.9862 L23: 1.5545 REMARK 3 S TENSOR REMARK 3 S11: -0.0650 S12: -0.3550 S13: 0.0963 REMARK 3 S21: 0.3318 S22: 0.2478 S23: -0.0428 REMARK 3 S31: -0.2413 S32: 0.2227 S33: -0.1765 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 178 THROUGH 221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 41.7462 49.2594 -5.1152 REMARK 3 T TENSOR REMARK 3 T11: 0.9857 T22: 1.7046 REMARK 3 T33: 1.8021 T12: -0.1782 REMARK 3 T13: -0.3227 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.7295 L22: 9.5235 REMARK 3 L33: 5.2015 L12: -3.4840 REMARK 3 L13: -2.3889 L23: 2.5910 REMARK 3 S TENSOR REMARK 3 S11: -0.1147 S12: -0.2020 S13: 0.9546 REMARK 3 S21: -0.4461 S22: -0.0262 S23: -1.6823 REMARK 3 S31: -0.8226 S32: 1.5516 S33: 0.3188 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 222 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.7835 38.0422 -11.6388 REMARK 3 T TENSOR REMARK 3 T11: 0.5360 T22: 0.6498 REMARK 3 T33: 0.4491 T12: -0.0005 REMARK 3 T13: -0.0125 T23: 0.0623 REMARK 3 L TENSOR REMARK 3 L11: 2.5008 L22: 4.8420 REMARK 3 L33: 2.1563 L12: -2.1645 REMARK 3 L13: 0.5707 L23: -0.6523 REMARK 3 S TENSOR REMARK 3 S11: -0.1809 S12: -0.3800 S13: 0.1409 REMARK 3 S21: 0.1093 S22: 0.1234 S23: 0.1290 REMARK 3 S31: -0.5724 S32: -0.1270 S33: 0.0034 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BNV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-NOV-22. REMARK 100 THE DEPOSITION ID IS D_1292126726. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978480 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12146 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.860 REMARK 200 RESOLUTION RANGE LOW (A) : 75.993 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.91 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.77700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5FTD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS-HCL 100 MM PEG 8K 12% ISOPROPANOL REMARK 280 5%, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.18400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.18400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 44.38200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 73.52650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 44.38200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 73.52650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.18400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 44.38200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 73.52650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 39.18400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 44.38200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 73.52650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19510 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 LEU A 3 REMARK 465 ALA A 4 REMARK 465 LEU A 5 REMARK 465 ASN A 6 REMARK 465 THR A 7 REMARK 465 GLU A 8 REMARK 465 PHE A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 ALA A 12 REMARK 465 ILE A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 15 REMARK 465 ALA A 16 REMARK 465 THR A 17 REMARK 465 ASN A 18 REMARK 465 SER A 19 REMARK 465 VAL A 145 REMARK 465 LEU A 146 REMARK 465 THR A 147 REMARK 465 ASN A 148 REMARK 465 HIS A 149 REMARK 465 GLN A 150 REMARK 465 LYS A 151 REMARK 465 LYS A 152 REMARK 465 ALA A 153 REMARK 465 PHE A 154 REMARK 465 ASN A 155 REMARK 465 ASP A 412 REMARK 465 LYS A 413 REMARK 465 LYS A 414 REMARK 465 VAL A 415 REMARK 465 VAL A 416 REMARK 465 ASN A 417 REMARK 465 PHE A 418 REMARK 465 LEU A 419 REMARK 465 THR A 420 REMARK 465 ASN A 421 REMARK 465 PHE A 422 REMARK 465 GLN A 423 REMARK 465 TYR A 424 REMARK 465 GLN A 425 REMARK 465 LEU A 426 REMARK 465 SER A 427 REMARK 465 GLU A 428 REMARK 465 LYS A 429 REMARK 465 LYS A 430 REMARK 465 THR A 431 REMARK 465 PRO A 432 REMARK 465 LEU A 433 REMARK 465 GLU A 434 REMARK 465 GLU A 435 REMARK 465 LYS A 436 REMARK 465 ILE A 437 REMARK 465 SER A 438 REMARK 465 ILE A 439 REMARK 465 LEU A 440 REMARK 465 LYS A 441 REMARK 465 ARG A 442 REMARK 465 ALA A 443 REMARK 465 ILE A 444 REMARK 465 GLU A 445 REMARK 465 ARG A 446 REMARK 465 ASN A 447 REMARK 465 SER A 448 REMARK 465 PRO A 449 REMARK 465 LEU A 450 REMARK 465 GLU A 451 REMARK 465 ILE A 452 REMARK 465 VAL A 453 REMARK 465 TYR A 454 REMARK 465 LEU A 455 REMARK 465 LYS A 456 REMARK 465 THR A 457 REMARK 465 LYS A 458 REMARK 465 ASP A 459 REMARK 465 GLU A 460 REMARK 465 LYS A 461 REMARK 465 SER A 462 REMARK 465 LYS A 463 REMARK 465 ARG A 464 REMARK 465 VAL A 465 REMARK 465 ILE A 466 REMARK 465 ILE A 467 REMARK 465 PRO A 468 REMARK 465 LYS A 469 REMARK 465 GLU A 470 REMARK 465 VAL A 471 REMARK 465 GLY A 472 REMARK 465 GLU A 473 REMARK 465 MET A 474 REMARK 465 VAL A 475 REMARK 465 TYR A 476 REMARK 465 SER A 477 REMARK 465 GLY A 478 REMARK 465 LYS A 479 REMARK 465 SER A 480 REMARK 465 PHE A 481 REMARK 465 MET A 482 REMARK 465 GLY A 483 REMARK 465 LEU A 484 REMARK 465 LYS A 485 REMARK 465 GLY A 486 REMARK 465 PHE A 487 REMARK 465 CYS A 488 REMARK 465 THR A 489 REMARK 465 MET A 490 REMARK 465 ARG A 491 REMARK 465 ASN A 492 REMARK 465 ASP A 493 REMARK 465 GLU A 494 REMARK 465 ARG A 495 REMARK 465 VAL A 496 REMARK 465 PHE A 497 REMARK 465 ARG A 498 REMARK 465 ILE A 499 REMARK 465 ASP A 500 REMARK 465 ARG A 501 REMARK 465 ILE A 502 REMARK 465 LEU A 503 REMARK 465 GLU A 504 REMARK 465 ILE A 505 REMARK 465 LYS A 506 REMARK 465 GLU A 507 REMARK 465 ILE A 508 REMARK 465 ASN A 509 REMARK 465 ASP A 510 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 75 54.74 -91.22 REMARK 500 ASN A 199 31.34 -98.67 REMARK 500 ASN A 200 17.36 57.29 REMARK 500 SER A 363 58.67 -93.65 REMARK 500 PHE A 368 166.17 66.86 REMARK 500 HIS A 378 120.22 69.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ILE A 209 ILE A 210 140.22 REMARK 500 ASP A 221 ASP A 222 -149.85 REMARK 500 REMARK 500 REMARK: NULL DBREF 8BNV A 1 510 UNP D3PAZ1 D3PAZ1_DEFDS 1 510 SEQRES 1 A 510 MET LYS LEU ALA LEU ASN THR GLU PHE LYS LYS ALA ILE SEQRES 2 A 510 ASP LEU ALA THR ASN SER SER LYS ASN LEU PHE ILE THR SEQRES 3 A 510 GLY LYS ALA GLY THR GLY LYS SER THR PHE LEU LYS TYR SEQRES 4 A 510 LEU ILE ASN GLU LEU LEU PHE ASP ALA VAL VAL LEU ALA SEQRES 5 A 510 PRO THR GLY VAL ALA ALA ILE ASN ILE GLY GLY GLU THR SEQRES 6 A 510 ILE HIS SER PHE PHE ASN PHE PRO ILE ASN ILE THR PRO SEQRES 7 A 510 ASP LYS ILE PRO ASP LEU PHE ILE TYR ASP TYR GLU ILE SEQRES 8 A 510 TYR LYS TYR VAL ASN THR ILE ILE ILE ASP GLU ILE SER SEQRES 9 A 510 MET VAL ARG ALA ASP LEU LEU ASP CYS ILE ASP LEU PHE SEQRES 10 A 510 LEU LYS ARG VAL LYS ASN PRO LYS LEU PRO PHE GLY GLY SEQRES 11 A 510 THR LYS MET ILE PHE ILE GLY ASP LEU TYR GLN LEU PRO SEQRES 12 A 510 PRO VAL LEU THR ASN HIS GLN LYS LYS ALA PHE ASN MET SEQRES 13 A 510 GLU TYR GLU SER PRO TYR PHE PHE SER ALA LYS VAL PHE SEQRES 14 A 510 LYS GLU MET ASP MET GLU PHE ILE GLU PHE GLU THR ILE SEQRES 15 A 510 TYR ARG GLN SER ASP LYS LEU PHE ILE ASP ILE LEU ASN SEQRES 16 A 510 ARG ILE ARG ASN ASN THR VAL THR ASP GLU ASP ILE LYS SEQRES 17 A 510 ILE ILE ASN SER ARG VAL GLN ASP LYS ILE ASP ASN ASP SEQRES 18 A 510 ASP GLY TYR ILE TYR ILE THR THR VAL ASN LYS LYS ALA SEQRES 19 A 510 GLU GLU ILE ASN ASN GLN LYS LEU ASP LYS LEU LYS GLY SEQRES 20 A 510 LYS LEU TYR LYS LEU ASN GLY THR LEU LYS GLY ASN PHE SEQRES 21 A 510 ASP GLU ASN SER LEU PRO THR PRO LYS ASN LEU HIS LEU SEQRES 22 A 510 LYS ILE GLY ALA GLN VAL MET LEU LEU ASN ASN ALA PRO SEQRES 23 A 510 ASP ARG MET TRP VAL ASN GLY THR ILE GLY THR ILE THR SEQRES 24 A 510 ASN ILE PHE PRO ASP GLU MET ILE ILE GLU LEU ALA LEU SEQRES 25 A 510 GLU ASN GLY ASN ILE VAL GLU ILE THR PRO PHE LYS TRP SEQRES 26 A 510 ASP MET ILE LYS PHE THR TYR ASP LYS LYS GLU LYS LYS SEQRES 27 A 510 MET LEU SER GLU THR ILE GLY SER TYR THR GLN PHE PRO SEQRES 28 A 510 LEU LYS LEU ALA TYR ALA ILE THR VAL HIS LYS SER GLN SEQRES 29 A 510 GLY LYS THR PHE HIS LYS VAL ILE ILE ASP THR SER ARG SEQRES 30 A 510 HIS PHE PHE ALA PRO GLY GLN PHE TYR VAL ALA LEU SER SEQRES 31 A 510 ARG CYS THR SER LEU ASP GLY ILE ILE LEU THR LYS LYS SEQRES 32 A 510 ILE THR LYS ASN SER ILE ILE LEU ASP LYS LYS VAL VAL SEQRES 33 A 510 ASN PHE LEU THR ASN PHE GLN TYR GLN LEU SER GLU LYS SEQRES 34 A 510 LYS THR PRO LEU GLU GLU LYS ILE SER ILE LEU LYS ARG SEQRES 35 A 510 ALA ILE GLU ARG ASN SER PRO LEU GLU ILE VAL TYR LEU SEQRES 36 A 510 LYS THR LYS ASP GLU LYS SER LYS ARG VAL ILE ILE PRO SEQRES 37 A 510 LYS GLU VAL GLY GLU MET VAL TYR SER GLY LYS SER PHE SEQRES 38 A 510 MET GLY LEU LYS GLY PHE CYS THR MET ARG ASN ASP GLU SEQRES 39 A 510 ARG VAL PHE ARG ILE ASP ARG ILE LEU GLU ILE LYS GLU SEQRES 40 A 510 ILE ASN ASP HET GOL A 601 14 HET MG A 602 1 HETNAM GOL GLYCEROL HETNAM MG MAGNESIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 MG MG 2+ FORMUL 4 HOH *7(H2 O) HELIX 1 AA1 GLY A 30 LEU A 44 1 15 HELIX 2 AA2 THR A 54 GLY A 62 1 9 HELIX 3 AA3 ILE A 66 ASN A 71 1 6 HELIX 4 AA4 THR A 77 ILE A 81 5 5 HELIX 5 AA5 GLU A 90 VAL A 95 5 6 HELIX 6 AA6 ILE A 103 VAL A 106 5 4 HELIX 7 AA7 ARG A 107 LYS A 122 1 16 HELIX 8 AA8 LEU A 126 THR A 131 5 6 HELIX 9 AA9 TYR A 162 SER A 165 5 4 HELIX 10 AB1 ALA A 166 GLU A 171 1 6 HELIX 11 AB2 GLU A 178 ILE A 182 5 5 HELIX 12 AB3 ILE A 191 ASN A 199 1 9 HELIX 13 AB4 THR A 203 ILE A 207 5 5 HELIX 14 AB5 ILE A 210 VAL A 214 5 5 HELIX 15 AB6 VAL A 230 LEU A 245 1 16 HELIX 16 AB7 GLY A 383 SER A 390 1 8 HELIX 17 AB8 SER A 394 ASP A 396 5 3 SHEET 1 AA1 6 GLU A 64 THR A 65 0 SHEET 2 AA1 6 ALA A 48 ALA A 52 1 N VAL A 50 O GLU A 64 SHEET 3 AA1 6 THR A 97 ASP A 101 1 O ILE A 99 N LEU A 51 SHEET 4 AA1 6 LYS A 132 GLY A 137 1 O ILE A 134 N ILE A 100 SHEET 5 AA1 6 ASN A 22 THR A 26 1 N ILE A 25 O PHE A 135 SHEET 6 AA1 6 MET A 174 ILE A 177 1 O GLU A 175 N PHE A 24 SHEET 1 AA2 4 ALA A 357 THR A 359 0 SHEET 2 AA2 4 ILE A 225 THR A 228 1 N THR A 228 O ILE A 358 SHEET 3 AA2 4 VAL A 371 ILE A 373 1 O ILE A 372 N ILE A 227 SHEET 4 AA2 4 ILE A 398 LEU A 400 1 O ILE A 399 N ILE A 373 SHEET 1 AA3 2 LEU A 249 ASN A 253 0 SHEET 2 AA3 2 ASN A 270 LYS A 274 -1 O LEU A 273 N TYR A 250 SHEET 1 AA4 3 THR A 255 GLY A 258 0 SHEET 2 AA4 3 LYS A 338 GLN A 349 -1 O THR A 348 N THR A 255 SHEET 3 AA4 3 PHE A 323 ASP A 333 -1 N THR A 331 O LEU A 340 SHEET 1 AA5 5 ILE A 317 ILE A 320 0 SHEET 2 AA5 5 ILE A 307 LEU A 312 -1 N ILE A 308 O ILE A 320 SHEET 3 AA5 5 ILE A 295 PHE A 302 -1 N THR A 297 O ALA A 311 SHEET 4 AA5 5 GLN A 278 LEU A 281 -1 N VAL A 279 O GLY A 296 SHEET 5 AA5 5 LEU A 352 LEU A 354 -1 O LYS A 353 N MET A 280 LINK OD1 ASP A 47 MG MG A 602 1555 1555 2.70 CISPEP 1 LYS A 208 ILE A 209 0 5.94 CISPEP 2 ASN A 220 ASP A 221 0 -5.62 CRYST1 88.764 147.053 78.368 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011266 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006800 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012760 0.00000