HEADER STRUCTURAL PROTEIN 28-NOV-22 8BT9 TITLE CRYSTAL STRUCTURE OF SLPA DOMAIN II (AA 201-310), DOMAIN THAT IS TITLE 2 INVOLVED IN THE SELF-ASSEMBLY AND DIMERIZATION OF THE S-LAYER FROM TITLE 3 LACTOBACILLUS ACIDOPHILUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: S-LAYER PROTEIN; COMPND 3 CHAIN: A, C, B; COMPND 4 SYNONYM: SURFACE LAYER PROTEIN,SA-PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS ACIDOPHILUS; SOURCE 3 ORGANISM_TAXID: 1579; SOURCE 4 GENE: SLPA, LBA0169; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SELF-ASSEMBLY, SURFACE LAYER, P2 SYMMETRY, STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.SAGMEISTER,C.GRININGER,T.PAVKOV-KELLER REVDAT 2 19-JUN-24 8BT9 1 JRNL REVDAT 1 06-SEP-23 8BT9 0 JRNL AUTH T.SAGMEISTER,N.GUBENSAK,C.BUHLHELLER,C.GRININGER,M.EDER, JRNL AUTH 2 A.ÐORDIC,C.MILLAN,A.MEDINA,P.A.S.MURCIA,F.BERNI, JRNL AUTH 3 U.HYNONEN,D.VEJZOVIC,E.DAMISCH,N.KULMINSKAYA,L.PETROWITSCH, JRNL AUTH 4 M.OBERER,A.PALVA,N.MALANOVIC,J.CODEE,W.KELLER,I.USON, JRNL AUTH 5 T.PAVKOV-KELLER JRNL TITL THE MOLECULAR ARCHITECTURE OF LACTOBACILLUS S-LAYER: JRNL TITL 2 ASSEMBLY AND ATTACHMENT TO TEICHOIC ACIDS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 121 86121 2024 JRNL REFN ESSN 1091-6490 JRNL PMID 38838019 JRNL DOI 10.1073/PNAS.2401686121 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0352 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 32853 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.162 REMARK 3 FREE R VALUE TEST SET COUNT : 1696 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.15 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2282 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3030 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.2720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2495 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 153 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.71 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 69.67 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.75300 REMARK 3 B22 (A**2) : -0.75300 REMARK 3 B33 (A**2) : 2.44200 REMARK 3 B12 (A**2) : -0.37600 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.147 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.472 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2580 ; 0.008 ; 0.011 REMARK 3 BOND LENGTHS OTHERS (A): 2316 ; 0.002 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3533 ; 1.498 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5386 ; 0.518 ; 1.572 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 337 ; 7.587 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 3 ; 5.864 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 391 ;13.926 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 436 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2955 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 468 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 458 ; 0.223 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 103 ; 0.206 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1270 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 119 ; 0.212 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1355 ; 4.806 ; 4.722 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1355 ; 4.804 ; 4.722 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1690 ; 6.654 ; 7.026 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1691 ; 6.652 ; 7.032 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1225 ; 5.680 ; 5.301 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1226 ; 5.678 ; 5.304 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1842 ; 8.016 ; 7.697 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1843 ; 8.014 ; 7.701 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 201 A 310 NULL REMARK 3 1 A 201 A 310 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 2 A 201 A 311 NULL REMARK 3 2 A 201 A 311 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 3 A 201 A 310 NULL REMARK 3 3 A 201 A 310 NULL REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 200 A 401 REMARK 3 ORIGIN FOR THE GROUP (A): 13.5671 -64.9071 2.4611 REMARK 3 T TENSOR REMARK 3 T11: 0.1312 T22: 0.3641 REMARK 3 T33: 0.3454 T12: -0.0811 REMARK 3 T13: -0.0470 T23: 0.0008 REMARK 3 L TENSOR REMARK 3 L11: 3.2549 L22: 1.9899 REMARK 3 L33: 0.1284 L12: -2.3239 REMARK 3 L13: -0.0528 L23: 0.2295 REMARK 3 S TENSOR REMARK 3 S11: -0.0259 S12: 0.1392 S13: -0.1047 REMARK 3 S21: -0.1605 S22: -0.0904 S23: 0.1425 REMARK 3 S31: -0.1010 S32: -0.0523 S33: 0.1163 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): 16.8525 -59.5916 -17.9055 REMARK 3 T TENSOR REMARK 3 T11: 0.0585 T22: 0.7017 REMARK 3 T33: 0.1929 T12: -0.0644 REMARK 3 T13: -0.0288 T23: 0.2094 REMARK 3 L TENSOR REMARK 3 L11: 1.4090 L22: 0.7731 REMARK 3 L33: 2.4844 L12: 0.2453 REMARK 3 L13: -0.8122 L23: 0.9607 REMARK 3 S TENSOR REMARK 3 S11: 0.1474 S12: 0.5555 S13: 0.2436 REMARK 3 S21: 0.0646 S22: -0.1897 S23: 0.0714 REMARK 3 S31: -0.1528 S32: -0.3707 S33: 0.0423 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 0 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 ORIGIN FOR THE GROUP (A): -20.5874 -47.8077 -8.9281 REMARK 3 T TENSOR REMARK 3 T11: 0.1880 T22: 0.2584 REMARK 3 T33: 0.3220 T12: 0.1345 REMARK 3 T13: -0.0371 T23: -0.0362 REMARK 3 L TENSOR REMARK 3 L11: 1.5745 L22: 0.5787 REMARK 3 L33: 0.5544 L12: -0.5102 REMARK 3 L13: 0.1002 L23: 0.2133 REMARK 3 S TENSOR REMARK 3 S11: 0.1004 S12: -0.1301 S13: 0.0915 REMARK 3 S21: -0.2255 S22: -0.1882 S23: -0.0339 REMARK 3 S31: -0.2536 S32: -0.0676 S33: 0.0879 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8BT9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1292127010. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, DESY REMARK 200 BEAMLINE : P11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033230 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32853 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 47.124 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.01155 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.7600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.48490 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.570 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CONDITION: 1.0 M SODIUM CITRATE REMARK 280 TRIBASIC DIHYDRATE, 0.1 M MES, PH 6.5 PROTEIN: 10 MG/ML IN 150 REMARK 280 MM NACL, 25 MM HEPES, PH 7.0 0.5 UL PROTEIN MIXED WITH 0.5 UL REMARK 280 CONDITION, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.20067 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 17.10033 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 17.10033 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 34.20067 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -17.10033 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 199 REMARK 465 ASN A 296 REMARK 465 GLY A 297 REMARK 465 LYS A 298 REMARK 465 HIS A 313 REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 465 HIS A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 MET C 199 REMARK 465 GLY C 200 REMARK 465 THR C 295 REMARK 465 ASN C 296 REMARK 465 GLU C 312 REMARK 465 HIS C 313 REMARK 465 HIS C 314 REMARK 465 HIS C 315 REMARK 465 HIS C 316 REMARK 465 HIS C 317 REMARK 465 HIS C 318 REMARK 465 MET B 199 REMARK 465 GLY B 200 REMARK 465 ASN B 296 REMARK 465 GLY B 297 REMARK 465 LYS B 298 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 530 O HOH A 546 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 577 O HOH A 577 6554 1.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 257 40.86 -95.65 REMARK 500 ASN C 257 40.10 -89.53 REMARK 500 ASN B 257 43.05 -95.18 REMARK 500 THR B 284 111.38 -161.46 REMARK 500 HIS B 315 138.44 -170.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 578 DISTANCE = 8.10 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7QFL RELATED DB: PDB REMARK 900 MONOMER STATE DBREF 8BT9 A 201 313 UNP P35829 SLAP_LACAC 199 311 DBREF 8BT9 C 201 313 UNP P35829 SLAP_LACAC 199 311 DBREF 8BT9 B 201 313 UNP P35829 SLAP_LACAC 199 311 SEQADV 8BT9 MET A 199 UNP P35829 INITIATING METHIONINE SEQADV 8BT9 GLY A 200 UNP P35829 EXPRESSION TAG SEQADV 8BT9 LEU A 311 UNP P35829 VAL 309 CONFLICT SEQADV 8BT9 GLU A 312 UNP P35829 ALA 310 CONFLICT SEQADV 8BT9 HIS A 313 UNP P35829 GLU 311 CONFLICT SEQADV 8BT9 HIS A 314 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS A 315 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS A 316 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS A 317 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS A 318 UNP P35829 EXPRESSION TAG SEQADV 8BT9 MET C 199 UNP P35829 INITIATING METHIONINE SEQADV 8BT9 GLY C 200 UNP P35829 EXPRESSION TAG SEQADV 8BT9 LEU C 311 UNP P35829 VAL 309 CONFLICT SEQADV 8BT9 GLU C 312 UNP P35829 ALA 310 CONFLICT SEQADV 8BT9 HIS C 313 UNP P35829 GLU 311 CONFLICT SEQADV 8BT9 HIS C 314 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS C 315 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS C 316 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS C 317 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS C 318 UNP P35829 EXPRESSION TAG SEQADV 8BT9 MET B 199 UNP P35829 INITIATING METHIONINE SEQADV 8BT9 GLY B 200 UNP P35829 EXPRESSION TAG SEQADV 8BT9 LEU B 311 UNP P35829 VAL 309 CONFLICT SEQADV 8BT9 GLU B 312 UNP P35829 ALA 310 CONFLICT SEQADV 8BT9 HIS B 313 UNP P35829 GLU 311 CONFLICT SEQADV 8BT9 HIS B 314 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS B 315 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS B 316 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS B 317 UNP P35829 EXPRESSION TAG SEQADV 8BT9 HIS B 318 UNP P35829 EXPRESSION TAG SEQRES 1 A 120 MET GLY ASN VAL ASN PHE TYR ASP VAL THR SER GLY ALA SEQRES 2 A 120 THR VAL THR ASN GLY ALA VAL SER VAL ASN ALA ASP ASN SEQRES 3 A 120 GLN GLY GLN VAL ASN VAL ALA ASN VAL VAL ALA ALA ILE SEQRES 4 A 120 ASN SER LYS TYR PHE ALA ALA GLN TYR ALA ASP LYS LYS SEQRES 5 A 120 LEU ASN THR ARG THR ALA ASN THR GLU ASP ALA ILE LYS SEQRES 6 A 120 ALA ALA LEU LYS ASP GLN LYS ILE ASP VAL ASN SER VAL SEQRES 7 A 120 GLY TYR PHE LYS ALA PRO HIS THR PHE THR VAL ASN VAL SEQRES 8 A 120 LYS ALA THR SER ASN THR ASN GLY LYS SER ALA THR LEU SEQRES 9 A 120 PRO VAL VAL VAL THR VAL PRO ASN LEU GLU HIS HIS HIS SEQRES 10 A 120 HIS HIS HIS SEQRES 1 C 120 MET GLY ASN VAL ASN PHE TYR ASP VAL THR SER GLY ALA SEQRES 2 C 120 THR VAL THR ASN GLY ALA VAL SER VAL ASN ALA ASP ASN SEQRES 3 C 120 GLN GLY GLN VAL ASN VAL ALA ASN VAL VAL ALA ALA ILE SEQRES 4 C 120 ASN SER LYS TYR PHE ALA ALA GLN TYR ALA ASP LYS LYS SEQRES 5 C 120 LEU ASN THR ARG THR ALA ASN THR GLU ASP ALA ILE LYS SEQRES 6 C 120 ALA ALA LEU LYS ASP GLN LYS ILE ASP VAL ASN SER VAL SEQRES 7 C 120 GLY TYR PHE LYS ALA PRO HIS THR PHE THR VAL ASN VAL SEQRES 8 C 120 LYS ALA THR SER ASN THR ASN GLY LYS SER ALA THR LEU SEQRES 9 C 120 PRO VAL VAL VAL THR VAL PRO ASN LEU GLU HIS HIS HIS SEQRES 10 C 120 HIS HIS HIS SEQRES 1 B 120 MET GLY ASN VAL ASN PHE TYR ASP VAL THR SER GLY ALA SEQRES 2 B 120 THR VAL THR ASN GLY ALA VAL SER VAL ASN ALA ASP ASN SEQRES 3 B 120 GLN GLY GLN VAL ASN VAL ALA ASN VAL VAL ALA ALA ILE SEQRES 4 B 120 ASN SER LYS TYR PHE ALA ALA GLN TYR ALA ASP LYS LYS SEQRES 5 B 120 LEU ASN THR ARG THR ALA ASN THR GLU ASP ALA ILE LYS SEQRES 6 B 120 ALA ALA LEU LYS ASP GLN LYS ILE ASP VAL ASN SER VAL SEQRES 7 B 120 GLY TYR PHE LYS ALA PRO HIS THR PHE THR VAL ASN VAL SEQRES 8 B 120 LYS ALA THR SER ASN THR ASN GLY LYS SER ALA THR LEU SEQRES 9 B 120 PRO VAL VAL VAL THR VAL PRO ASN LEU GLU HIS HIS HIS SEQRES 10 B 120 HIS HIS HIS HET NCA A 401 13 HETNAM NCA NICOTINAMIDE FORMUL 4 NCA C6 H6 N2 O FORMUL 5 HOH *153(H2 O) HELIX 1 AA1 VAL A 230 LYS A 240 1 11 HELIX 2 AA2 ASN A 257 GLN A 269 1 13 HELIX 3 AA3 VAL C 230 LYS C 240 1 11 HELIX 4 AA4 ASN C 257 GLN C 269 1 13 HELIX 5 AA5 VAL B 230 LYS B 240 1 11 HELIX 6 AA6 ASN B 257 GLN B 269 1 13 HELIX 7 AA7 PRO B 309 GLU B 312 5 4 SHEET 1 AA1 4 THR A 212 VAL A 213 0 SHEET 2 AA1 4 VAL A 202 ASP A 206 -1 N PHE A 204 O VAL A 213 SHEET 3 AA1 4 TYR A 241 ALA A 247 -1 O PHE A 242 N TYR A 205 SHEET 4 AA1 4 LYS A 250 ARG A 254 -1 O ASN A 252 N GLN A 245 SHEET 1 AA2 3 GLY A 216 SER A 219 0 SHEET 2 AA2 3 ALA A 300 THR A 307 1 O PRO A 303 N GLY A 216 SHEET 3 AA2 3 THR A 284 ALA A 291 -1 N VAL A 289 O LEU A 302 SHEET 1 AA3 2 GLN A 227 ASN A 229 0 SHEET 2 AA3 2 TYR A 278 LYS A 280 -1 O PHE A 279 N VAL A 228 SHEET 1 AA4 4 THR C 212 VAL C 213 0 SHEET 2 AA4 4 VAL C 202 ASP C 206 -1 N PHE C 204 O VAL C 213 SHEET 3 AA4 4 TYR C 241 ALA C 247 -1 O PHE C 242 N TYR C 205 SHEET 4 AA4 4 LYS C 250 ARG C 254 -1 O ASN C 252 N GLN C 245 SHEET 1 AA5 3 GLY C 216 SER C 219 0 SHEET 2 AA5 3 ALA C 300 THR C 307 1 O PRO C 303 N GLY C 216 SHEET 3 AA5 3 THR C 284 ALA C 291 -1 N VAL C 289 O LEU C 302 SHEET 1 AA6 2 GLN C 227 ASN C 229 0 SHEET 2 AA6 2 TYR C 278 LYS C 280 -1 O PHE C 279 N VAL C 228 SHEET 1 AA7 4 THR B 212 VAL B 213 0 SHEET 2 AA7 4 VAL B 202 ASP B 206 -1 N PHE B 204 O VAL B 213 SHEET 3 AA7 4 TYR B 241 ALA B 247 -1 O PHE B 242 N TYR B 205 SHEET 4 AA7 4 LYS B 250 ARG B 254 -1 O ASN B 252 N GLN B 245 SHEET 1 AA8 3 GLY B 216 SER B 219 0 SHEET 2 AA8 3 ALA B 300 THR B 307 1 O PRO B 303 N GLY B 216 SHEET 3 AA8 3 THR B 284 ALA B 291 -1 N PHE B 285 O VAL B 306 SHEET 1 AA9 2 GLN B 227 ASN B 229 0 SHEET 2 AA9 2 TYR B 278 LYS B 280 -1 O PHE B 279 N VAL B 228 CRYST1 137.690 137.690 51.301 90.00 90.00 120.00 P 32 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007263 0.004193 0.000000 0.00000 SCALE2 0.000000 0.008386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019493 0.00000 MTRIX1 1 -0.884399 0.386781 0.261228 16.98687 1 MTRIX2 1 0.377733 0.264395 0.887363 -36.90496 1 MTRIX3 1 0.274148 0.883457 -0.379930 45.64843 1 MTRIX1 2 -0.941331 -0.323837 -0.095000 8.51848 1 MTRIX2 2 -0.330024 0.824445 0.459754 -2.87497 1 MTRIX3 2 -0.070563 0.464134 -0.882950 15.58819 1