HEADER CELL CYCLE 15-DEC-22 8BZO TITLE CRYO-EM STRUCTURE OF CDK2-CYCLINA IN COMPLEX WITH P27 FROM THE SCFSKP2 TITLE 2 E3 LIGASE COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYCLIN-DEPENDENT KINASE 2; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CELL DIVISION PROTEIN KINASE 2,P33 PROTEIN KINASE; COMPND 5 EC: 2.7.11.22; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: THR160 PHOSPHORYLATED CDK2; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: CYCLIN-A2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: CYCLIN-A,CYCLIN A; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: CYCLIN-DEPENDENT KINASE INHIBITOR 1B; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: CYCLIN-DEPENDENT KINASE INHIBITOR P27,P27KIP1; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDK2, CDKN2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_COMMON: HUMAN; SOURCE 12 ORGANISM_TAXID: 9606; SOURCE 13 GENE: CCNA2, CCN1, CCNA; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 19 ORGANISM_COMMON: HUMAN; SOURCE 20 ORGANISM_TAXID: 9606; SOURCE 21 GENE: P27 KIP1; SOURCE 22 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 23 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 24 EXPRESSION_SYSTEM_VARIANT: PLYSS KEYWDS CELL CYCLE, CYCLIN-DEPENDENT KINASE, SIGNALLING, UBIQUITINATION EXPDTA ELECTRON MICROSCOPY AUTHOR R.J.ROWLAND,M.SALAMINA,J.A.ENDICOTT,M.E.NOBLE REVDAT 3 06-NOV-24 8BZO 1 REMARK REVDAT 2 19-JUL-23 8BZO 1 JRNL REVDAT 1 28-JUN-23 8BZO 0 JRNL AUTH R.J.ROWLAND,R.HEATH,D.MASKELL,R.F.THOMPSON,N.A.RANSON, JRNL AUTH 2 J.N.BLAZA,J.A.ENDICOTT,M.E.M.NOBLE,M.SALAMINA JRNL TITL CRYO-EM STRUCTURE OF SKP1-SKP2-CKS1 IN COMPLEX WITH JRNL TITL 2 CDK2-CYCLIN A-P27KIP1. JRNL REF SCI REP V. 13 10718 2023 JRNL REFN ESSN 2045-2322 JRNL PMID 37400515 JRNL DOI 10.1038/S41598-023-37609-9 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, EPU, CRYOSPARC, UCSF REMARK 3 CHIMERAX, PHENIX, CRYOSPARC, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 121.000 REMARK 3 REMARK 3 FITTING PROCEDURE : INITIAL FITTING WAS PERFORMED IN CHIMERA REMARK 3 FOLLOWED BY REAL SPACE REFINEMENT IN PHENIX REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.500 REMARK 3 NUMBER OF PARTICLES : 136325 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8BZO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1292127487. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF CDK2-CYCLINA REMARK 245 -P27(KIP1)FROM THE SCFSKP2 E3 REMARK 245 LIGASE COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.20 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.80 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 130000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -49.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 ASN A 3 REMARK 465 PHE A 4 REMARK 465 GLN A 5 REMARK 465 LYS A 6 REMARK 465 VAL A 7 REMARK 465 GLU A 8 REMARK 465 LYS A 9 REMARK 465 ILE A 10 REMARK 465 GLY A 11 REMARK 465 GLU A 12 REMARK 465 GLY A 13 REMARK 465 MET B 1 REMARK 465 LEU B 2 REMARK 465 GLY B 3 REMARK 465 ASN B 4 REMARK 465 SER B 5 REMARK 465 ALA B 6 REMARK 465 PRO B 7 REMARK 465 GLY B 8 REMARK 465 PRO B 9 REMARK 465 ALA B 10 REMARK 465 THR B 11 REMARK 465 ARG B 12 REMARK 465 GLU B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 SER B 16 REMARK 465 ALA B 17 REMARK 465 LEU B 18 REMARK 465 LEU B 19 REMARK 465 ALA B 20 REMARK 465 LEU B 21 REMARK 465 GLN B 22 REMARK 465 GLN B 23 REMARK 465 THR B 24 REMARK 465 ALA B 25 REMARK 465 LEU B 26 REMARK 465 GLN B 27 REMARK 465 GLU B 28 REMARK 465 ASP B 29 REMARK 465 GLN B 30 REMARK 465 GLU B 31 REMARK 465 ASN B 32 REMARK 465 ILE B 33 REMARK 465 ASN B 34 REMARK 465 PRO B 35 REMARK 465 GLU B 36 REMARK 465 LYS B 37 REMARK 465 ALA B 38 REMARK 465 ALA B 39 REMARK 465 PRO B 40 REMARK 465 VAL B 41 REMARK 465 GLN B 42 REMARK 465 GLN B 43 REMARK 465 PRO B 44 REMARK 465 ARG B 45 REMARK 465 THR B 46 REMARK 465 ARG B 47 REMARK 465 ALA B 48 REMARK 465 ALA B 49 REMARK 465 LEU B 50 REMARK 465 ALA B 51 REMARK 465 VAL B 52 REMARK 465 LEU B 53 REMARK 465 LYS B 54 REMARK 465 SER B 55 REMARK 465 GLY B 56 REMARK 465 ASN B 57 REMARK 465 PRO B 58 REMARK 465 ARG B 59 REMARK 465 GLY B 60 REMARK 465 LEU B 61 REMARK 465 ALA B 62 REMARK 465 GLN B 63 REMARK 465 GLN B 64 REMARK 465 GLN B 65 REMARK 465 ARG B 66 REMARK 465 PRO B 67 REMARK 465 LYS B 68 REMARK 465 THR B 69 REMARK 465 ARG B 70 REMARK 465 ARG B 71 REMARK 465 VAL B 72 REMARK 465 ALA B 73 REMARK 465 PRO B 74 REMARK 465 LEU B 75 REMARK 465 LYS B 76 REMARK 465 ASP B 77 REMARK 465 LEU B 78 REMARK 465 PRO B 79 REMARK 465 VAL B 80 REMARK 465 ASN B 81 REMARK 465 ASP B 82 REMARK 465 GLU B 83 REMARK 465 HIS B 84 REMARK 465 VAL B 85 REMARK 465 THR B 86 REMARK 465 VAL B 87 REMARK 465 PRO B 88 REMARK 465 PRO B 89 REMARK 465 TRP B 90 REMARK 465 LYS B 91 REMARK 465 ALA B 92 REMARK 465 ASN B 93 REMARK 465 SER B 94 REMARK 465 LYS B 95 REMARK 465 GLN B 96 REMARK 465 PRO B 97 REMARK 465 ALA B 98 REMARK 465 PHE B 99 REMARK 465 THR B 100 REMARK 465 ILE B 101 REMARK 465 HIS B 102 REMARK 465 VAL B 103 REMARK 465 ASP B 104 REMARK 465 GLU B 105 REMARK 465 ALA B 106 REMARK 465 GLU B 107 REMARK 465 LYS B 108 REMARK 465 GLU B 109 REMARK 465 ALA B 110 REMARK 465 GLN B 111 REMARK 465 LYS B 112 REMARK 465 LYS B 113 REMARK 465 PRO B 114 REMARK 465 ALA B 115 REMARK 465 GLU B 116 REMARK 465 SER B 117 REMARK 465 GLN B 118 REMARK 465 LYS B 119 REMARK 465 ILE B 120 REMARK 465 GLU B 121 REMARK 465 ARG B 122 REMARK 465 GLU B 123 REMARK 465 ASP B 124 REMARK 465 ALA B 125 REMARK 465 LEU B 126 REMARK 465 ALA B 127 REMARK 465 PHE B 128 REMARK 465 ASN B 129 REMARK 465 SER B 130 REMARK 465 ALA B 131 REMARK 465 ILE B 132 REMARK 465 SER B 133 REMARK 465 LEU B 134 REMARK 465 PRO B 135 REMARK 465 GLY B 136 REMARK 465 PRO B 137 REMARK 465 ARG B 138 REMARK 465 LYS B 139 REMARK 465 PRO B 140 REMARK 465 LEU B 141 REMARK 465 VAL B 142 REMARK 465 PRO B 143 REMARK 465 LEU B 144 REMARK 465 ASP B 145 REMARK 465 TYR B 146 REMARK 465 PRO B 147 REMARK 465 MET B 148 REMARK 465 ASP B 149 REMARK 465 GLY B 150 REMARK 465 SER B 151 REMARK 465 PHE B 152 REMARK 465 GLU B 153 REMARK 465 SER B 154 REMARK 465 PRO B 155 REMARK 465 HIS B 156 REMARK 465 THR B 157 REMARK 465 MET B 158 REMARK 465 ASP B 159 REMARK 465 MET B 160 REMARK 465 SER B 161 REMARK 465 ILE B 162 REMARK 465 ILE B 163 REMARK 465 LEU B 164 REMARK 465 GLU B 165 REMARK 465 ASP B 166 REMARK 465 GLU B 167 REMARK 465 LYS B 168 REMARK 465 PRO B 169 REMARK 465 VAL B 170 REMARK 465 SER B 171 REMARK 465 VAL B 172 REMARK 465 ASN B 173 REMARK 465 GLU B 174 REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 ASN C 3 REMARK 465 VAL C 4 REMARK 465 ARG C 5 REMARK 465 VAL C 6 REMARK 465 SER C 7 REMARK 465 ASN C 8 REMARK 465 GLY C 9 REMARK 465 SER C 10 REMARK 465 PRO C 11 REMARK 465 SER C 12 REMARK 465 LEU C 13 REMARK 465 GLU C 14 REMARK 465 ARG C 15 REMARK 465 MET C 16 REMARK 465 ASP C 17 REMARK 465 ALA C 18 REMARK 465 ARG C 19 REMARK 465 GLN C 20 REMARK 465 ALA C 21 REMARK 465 PRO C 94 REMARK 465 PRO C 95 REMARK 465 LYS C 96 REMARK 465 GLY C 97 REMARK 465 ALA C 98 REMARK 465 CYS C 99 REMARK 465 LYS C 100 REMARK 465 VAL C 101 REMARK 465 PRO C 102 REMARK 465 ALA C 103 REMARK 465 GLN C 104 REMARK 465 GLU C 105 REMARK 465 SER C 106 REMARK 465 GLN C 107 REMARK 465 ASP C 108 REMARK 465 GLY C 109 REMARK 465 SER C 110 REMARK 465 GLY C 111 REMARK 465 SER C 112 REMARK 465 ARG C 113 REMARK 465 PRO C 114 REMARK 465 ALA C 115 REMARK 465 ALA C 116 REMARK 465 PRO C 117 REMARK 465 LEU C 118 REMARK 465 ILE C 119 REMARK 465 GLY C 120 REMARK 465 ALA C 121 REMARK 465 PRO C 122 REMARK 465 ALA C 123 REMARK 465 ASN C 124 REMARK 465 SER C 125 REMARK 465 GLU C 126 REMARK 465 ASP C 127 REMARK 465 THR C 128 REMARK 465 HIS C 129 REMARK 465 LEU C 130 REMARK 465 VAL C 131 REMARK 465 ASP C 132 REMARK 465 PRO C 133 REMARK 465 LYS C 134 REMARK 465 THR C 135 REMARK 465 ASP C 136 REMARK 465 PRO C 137 REMARK 465 SER C 138 REMARK 465 ASP C 139 REMARK 465 SER C 140 REMARK 465 GLN C 141 REMARK 465 THR C 142 REMARK 465 GLY C 143 REMARK 465 LEU C 144 REMARK 465 ALA C 145 REMARK 465 GLU C 146 REMARK 465 GLN C 147 REMARK 465 CYS C 148 REMARK 465 ALA C 149 REMARK 465 GLY C 150 REMARK 465 ILE C 151 REMARK 465 ARG C 152 REMARK 465 LYS C 153 REMARK 465 ARG C 154 REMARK 465 PRO C 155 REMARK 465 ALA C 156 REMARK 465 THR C 157 REMARK 465 ASP C 158 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 22 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 LEU A 25 CG CD1 CD2 REMARK 470 THR A 26 OG1 CG2 REMARK 470 GLU A 42 CG CD OE1 OE2 REMARK 470 GLU A 51 CG CD OE1 OE2 REMARK 470 THR A 97 OG1 CG2 REMARK 470 LEU A 101 CG CD1 CD2 REMARK 470 ASP A 127 CG OD1 OD2 REMARK 470 ASP A 145 CG OD1 OD2 REMARK 470 VAL A 156 CG1 CG2 REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 LYS A 242 CG CD CE NZ REMARK 470 ARG A 245 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 250 CG CD CE NZ REMARK 470 GLU A 257 CG CD OE1 OE2 REMARK 470 ASP A 288 CG OD1 OD2 REMARK 470 VAL A 293 CG1 CG2 REMARK 470 HIS A 295 CG ND1 CD2 CE1 NE2 REMARK 470 LEU A 296 CG CD1 CD2 REMARK 470 ARG A 297 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 190 CG CD OE1 OE2 REMARK 470 ASP B 205 CG OD1 OD2 REMARK 470 MET B 246 CG SD CE REMARK 470 GLU B 268 CG CD OE1 OE2 REMARK 470 GLU B 274 CG CD OE1 OE2 REMARK 470 MET B 294 CG SD CE REMARK 470 GLN B 322 CG CD OE1 NE2 REMARK 470 CYS B 327 SG REMARK 470 LYS B 328 CG CD CE NZ REMARK 470 GLU B 330 CG CD OE1 OE2 REMARK 470 ASP B 393 CG OD1 OD2 REMARK 470 LYS B 400 CG CD CE NZ REMARK 470 GLN B 406 CG CD OE1 NE2 REMARK 470 LEU B 424 CG CD1 CD2 REMARK 470 GLU B 428 CG CD OE1 OE2 REMARK 470 LEU B 432 CG CD1 CD2 REMARK 470 LYS C 25 CG CD CE NZ REMARK 470 SER C 27 OG REMARK 470 ASP C 44 CG OD1 OD2 REMARK 470 MET C 52 CG SD CE REMARK 470 GLU C 71 CG CD OE1 OE2 REMARK 470 LYS C 73 CG CD CE NZ REMARK 470 GLU C 80 CG CD OE1 OE2 REMARK 470 GLU C 86 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 25 51.75 -92.39 REMARK 500 ARG A 122 9.53 59.67 REMARK 500 PRO A 130 -7.67 -58.86 REMARK 500 PRO A 155 3.35 -66.52 REMARK 500 TYR A 159 -140.41 -89.74 REMARK 500 HIS A 161 -10.92 -145.19 REMARK 500 PHE B 267 -30.56 -130.85 REMARK 500 ARG B 293 -6.13 72.14 REMARK 500 GLN B 323 143.50 69.53 REMARK 500 ARG C 30 115.17 -160.30 REMARK 500 GLU C 54 155.89 72.77 REMARK 500 ALA C 55 -8.61 65.80 REMARK 500 ASN C 61 48.37 32.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-16325 RELATED DB: EMDB REMARK 900 EM MAP OF FULL HEXAMERIC SKP1-SKP2-CKS1-CDK2-CYCLINA-P27 COMPLEX REMARK 900 RELATED ID: 8BYA RELATED DB: PDB REMARK 900 MODEL OF SKP1-SKP2-CKS1-CDK2-CYCLINA-P27 COMPLEX REMARK 900 RELATED ID: EMD-16327 RELATED DB: EMDB REMARK 900 EM PARTICLE SUBTRACTION MAP OF SKP1-SKP2-CKS1 FROM FULL HEXAMERIC REMARK 900 SCFSKP2 E3 LIGASE COMPLEX REMARK 900 RELATED ID: 8BYL RELATED DB: PDB REMARK 900 PARTICLE SUBTRACTION MODEL OF SKP1-SKP2-CKS1 FROM FULL HEXAMERIC REMARK 900 SCFSKP2 E3 LIGASE COMPLEX REMARK 900 RELATED ID: EMD-16344 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF CDK2-CYCLINA IN COMPLEX WITH P27 FROM THE REMARK 900 SCFSKP2 E3 LIGASE COMPLEX DBREF 8BZO A 1 297 UNP P24941 CDK2_HUMAN 1 297 DBREF 8BZO B 1 432 UNP P20248 CCNA2_HUMAN 1 432 DBREF 8BZO C 1 158 UNP O43806 O43806_HUMAN 1 158 SEQRES 1 A 297 MET GLU ASN PHE GLN LYS VAL GLU LYS ILE GLY GLU GLY SEQRES 2 A 297 THR TYR GLY VAL VAL TYR LYS ALA ARG ASN LYS LEU THR SEQRES 3 A 297 GLY GLU VAL VAL ALA LEU LYS LYS ILE ARG LEU ASP THR SEQRES 4 A 297 GLU THR GLU GLY VAL PRO SER THR ALA ILE ARG GLU ILE SEQRES 5 A 297 SER LEU LEU LYS GLU LEU ASN HIS PRO ASN ILE VAL LYS SEQRES 6 A 297 LEU LEU ASP VAL ILE HIS THR GLU ASN LYS LEU TYR LEU SEQRES 7 A 297 VAL PHE GLU PHE LEU HIS GLN ASP LEU LYS LYS PHE MET SEQRES 8 A 297 ASP ALA SER ALA LEU THR GLY ILE PRO LEU PRO LEU ILE SEQRES 9 A 297 LYS SER TYR LEU PHE GLN LEU LEU GLN GLY LEU ALA PHE SEQRES 10 A 297 CYS HIS SER HIS ARG VAL LEU HIS ARG ASP LEU LYS PRO SEQRES 11 A 297 GLN ASN LEU LEU ILE ASN THR GLU GLY ALA ILE LYS LEU SEQRES 12 A 297 ALA ASP PHE GLY LEU ALA ARG ALA PHE GLY VAL PRO VAL SEQRES 13 A 297 ARG THR TYR TPO HIS GLU VAL VAL THR LEU TRP TYR ARG SEQRES 14 A 297 ALA PRO GLU ILE LEU LEU GLY CYS LYS TYR TYR SER THR SEQRES 15 A 297 ALA VAL ASP ILE TRP SER LEU GLY CYS ILE PHE ALA GLU SEQRES 16 A 297 MET VAL THR ARG ARG ALA LEU PHE PRO GLY ASP SER GLU SEQRES 17 A 297 ILE ASP GLN LEU PHE ARG ILE PHE ARG THR LEU GLY THR SEQRES 18 A 297 PRO ASP GLU VAL VAL TRP PRO GLY VAL THR SER MET PRO SEQRES 19 A 297 ASP TYR LYS PRO SER PHE PRO LYS TRP ALA ARG GLN ASP SEQRES 20 A 297 PHE SER LYS VAL VAL PRO PRO LEU ASP GLU ASP GLY ARG SEQRES 21 A 297 SER LEU LEU SER GLN MET LEU HIS TYR ASP PRO ASN LYS SEQRES 22 A 297 ARG ILE SER ALA LYS ALA ALA LEU ALA HIS PRO PHE PHE SEQRES 23 A 297 GLN ASP VAL THR LYS PRO VAL PRO HIS LEU ARG SEQRES 1 B 432 MET LEU GLY ASN SER ALA PRO GLY PRO ALA THR ARG GLU SEQRES 2 B 432 ALA GLY SER ALA LEU LEU ALA LEU GLN GLN THR ALA LEU SEQRES 3 B 432 GLN GLU ASP GLN GLU ASN ILE ASN PRO GLU LYS ALA ALA SEQRES 4 B 432 PRO VAL GLN GLN PRO ARG THR ARG ALA ALA LEU ALA VAL SEQRES 5 B 432 LEU LYS SER GLY ASN PRO ARG GLY LEU ALA GLN GLN GLN SEQRES 6 B 432 ARG PRO LYS THR ARG ARG VAL ALA PRO LEU LYS ASP LEU SEQRES 7 B 432 PRO VAL ASN ASP GLU HIS VAL THR VAL PRO PRO TRP LYS SEQRES 8 B 432 ALA ASN SER LYS GLN PRO ALA PHE THR ILE HIS VAL ASP SEQRES 9 B 432 GLU ALA GLU LYS GLU ALA GLN LYS LYS PRO ALA GLU SER SEQRES 10 B 432 GLN LYS ILE GLU ARG GLU ASP ALA LEU ALA PHE ASN SER SEQRES 11 B 432 ALA ILE SER LEU PRO GLY PRO ARG LYS PRO LEU VAL PRO SEQRES 12 B 432 LEU ASP TYR PRO MET ASP GLY SER PHE GLU SER PRO HIS SEQRES 13 B 432 THR MET ASP MET SER ILE ILE LEU GLU ASP GLU LYS PRO SEQRES 14 B 432 VAL SER VAL ASN GLU VAL PRO ASP TYR HIS GLU ASP ILE SEQRES 15 B 432 HIS THR TYR LEU ARG GLU MET GLU VAL LYS CYS LYS PRO SEQRES 16 B 432 LYS VAL GLY TYR MET LYS LYS GLN PRO ASP ILE THR ASN SEQRES 17 B 432 SER MET ARG ALA ILE LEU VAL ASP TRP LEU VAL GLU VAL SEQRES 18 B 432 GLY GLU GLU TYR LYS LEU GLN ASN GLU THR LEU HIS LEU SEQRES 19 B 432 ALA VAL ASN TYR ILE ASP ARG PHE LEU SER SER MET SER SEQRES 20 B 432 VAL LEU ARG GLY LYS LEU GLN LEU VAL GLY THR ALA ALA SEQRES 21 B 432 MET LEU LEU ALA SER LYS PHE GLU GLU ILE TYR PRO PRO SEQRES 22 B 432 GLU VAL ALA GLU PHE VAL TYR ILE THR ASP ASP THR TYR SEQRES 23 B 432 THR LYS LYS GLN VAL LEU ARG MET GLU HIS LEU VAL LEU SEQRES 24 B 432 LYS VAL LEU THR PHE ASP LEU ALA ALA PRO THR VAL ASN SEQRES 25 B 432 GLN PHE LEU THR GLN TYR PHE LEU HIS GLN GLN PRO ALA SEQRES 26 B 432 ASN CYS LYS VAL GLU SER LEU ALA MET PHE LEU GLY GLU SEQRES 27 B 432 LEU SER LEU ILE ASP ALA ASP PRO TYR LEU LYS TYR LEU SEQRES 28 B 432 PRO SER VAL ILE ALA GLY ALA ALA PHE HIS LEU ALA LEU SEQRES 29 B 432 TYR THR VAL THR GLY GLN SER TRP PRO GLU SER LEU ILE SEQRES 30 B 432 ARG LYS THR GLY TYR THR LEU GLU SER LEU LYS PRO CYS SEQRES 31 B 432 LEU MET ASP LEU HIS GLN THR TYR LEU LYS ALA PRO GLN SEQRES 32 B 432 HIS ALA GLN GLN SER ILE ARG GLU LYS TYR LYS ASN SER SEQRES 33 B 432 LYS TYR HIS GLY VAL SER LEU LEU ASN PRO PRO GLU THR SEQRES 34 B 432 LEU ASN LEU SEQRES 1 C 158 MET SER ASN VAL ARG VAL SER ASN GLY SER PRO SER LEU SEQRES 2 C 158 GLU ARG MET ASP ALA ARG GLN ALA GLU HIS PRO LYS PRO SEQRES 3 C 158 SER ALA CYS ARG ASN LEU PHE GLY PRO VAL ASP HIS GLU SEQRES 4 C 158 GLU LEU THR ARG ASP LEU GLU LYS HIS CYS ARG ASP MET SEQRES 5 C 158 GLU GLU ALA SER GLN ARG LYS TRP ASN PHE ASP PHE GLN SEQRES 6 C 158 ASN HIS LYS PRO LEU GLU GLY LYS TYR GLU TRP GLN GLU SEQRES 7 C 158 VAL GLU LYS GLY SER LEU PRO GLU PHE TYR TYR ARG PRO SEQRES 8 C 158 PRO ARG PRO PRO LYS GLY ALA CYS LYS VAL PRO ALA GLN SEQRES 9 C 158 GLU SER GLN ASP GLY SER GLY SER ARG PRO ALA ALA PRO SEQRES 10 C 158 LEU ILE GLY ALA PRO ALA ASN SER GLU ASP THR HIS LEU SEQRES 11 C 158 VAL ASP PRO LYS THR ASP PRO SER ASP SER GLN THR GLY SEQRES 12 C 158 LEU ALA GLU GLN CYS ALA GLY ILE ARG LYS ARG PRO ALA SEQRES 13 C 158 THR ASP MODRES 8BZO TPO A 160 THR MODIFIED RESIDUE HET TPO A 160 11 HETNAM TPO PHOSPHOTHREONINE HETSYN TPO PHOSPHONOTHREONINE FORMUL 1 TPO C4 H10 N O6 P HELIX 1 AA1 PRO A 45 LEU A 55 1 11 HELIX 2 AA2 LEU A 87 SER A 94 1 8 HELIX 3 AA3 PRO A 100 HIS A 121 1 22 HELIX 4 AA4 THR A 165 ARG A 169 5 5 HELIX 5 AA5 ALA A 170 GLY A 176 1 7 HELIX 6 AA6 THR A 182 ARG A 199 1 18 HELIX 7 AA7 SER A 207 GLY A 220 1 14 HELIX 8 AA8 ASP A 247 VAL A 252 1 6 HELIX 9 AA9 ASP A 258 LEU A 267 1 10 HELIX 10 AB1 SER A 276 LEU A 281 1 6 HELIX 11 AB2 TYR B 178 GLU B 190 1 13 HELIX 12 AB3 THR B 207 GLU B 224 1 18 HELIX 13 AB4 GLN B 228 LEU B 243 1 16 HELIX 14 AB5 LYS B 252 GLU B 269 1 18 HELIX 15 AB6 GLU B 274 THR B 282 1 9 HELIX 16 AB7 THR B 287 LEU B 292 1 6 HELIX 17 AB8 MET B 294 LEU B 302 1 9 HELIX 18 AB9 THR B 310 LEU B 320 1 11 HELIX 19 AC1 SER B 331 ASP B 343 1 13 HELIX 20 AC2 LEU B 351 THR B 368 1 18 HELIX 21 AC3 GLU B 374 ARG B 378 5 5 HELIX 22 AC4 LEU B 387 ALA B 401 1 15 HELIX 23 AC5 PRO B 402 HIS B 404 5 3 HELIX 24 AC6 SER B 408 ASN B 415 1 8 HELIX 25 AC7 SER B 416 HIS B 419 5 4 HELIX 26 AC8 GLY B 420 LEU B 424 5 5 HELIX 27 AC9 ASP C 37 MET C 52 1 16 HELIX 28 AD1 PRO C 85 ARG C 90 5 6 SHEET 1 AA1 2 VAL A 18 ARG A 22 0 SHEET 2 AA1 2 GLU C 75 VAL C 79 -1 O GLU C 75 N ARG A 22 SHEET 1 AA2 3 VAL A 30 ARG A 36 0 SHEET 2 AA2 3 LYS A 75 GLU A 81 -1 O PHE A 80 N ALA A 31 SHEET 3 AA2 3 LEU A 66 HIS A 71 -1 N ILE A 70 O TYR A 77 SHEET 1 AA3 3 GLN A 85 ASP A 86 0 SHEET 2 AA3 3 LEU A 133 ILE A 135 -1 O ILE A 135 N GLN A 85 SHEET 3 AA3 3 ILE A 141 LEU A 143 -1 O LYS A 142 N LEU A 134 LINK C TYR A 159 N TPO A 160 1555 1555 1.34 LINK C TPO A 160 N HIS A 161 1555 1555 1.34 CISPEP 1 ASP B 345 PRO B 346 0 -0.51 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 HETATM 1131 N TPO A 160 158.138 163.709 155.175 1.00 91.03 N HETATM 1132 CA TPO A 160 158.149 165.019 155.895 1.00 91.03 C HETATM 1133 CB TPO A 160 157.460 164.886 157.256 1.00 91.03 C HETATM 1134 CG2 TPO A 160 155.994 164.541 157.137 1.00 91.03 C HETATM 1135 OG1 TPO A 160 158.132 163.789 157.971 1.00 91.03 O HETATM 1136 P TPO A 160 159.049 164.011 159.297 1.00 91.03 P HETATM 1137 O1P TPO A 160 160.491 163.907 158.840 1.00 91.03 O HETATM 1138 O2P TPO A 160 158.697 165.388 159.829 1.00 91.03 O HETATM 1139 O3P TPO A 160 158.674 162.903 160.261 1.00 91.03 O HETATM 1140 C TPO A 160 159.585 165.565 156.041 1.00 91.03 C HETATM 1141 O TPO A 160 160.495 164.757 156.267 1.00 91.03 O TER 2213 ARG A 297 TER 4243 LEU B 432 TER 4837 ARG C 93 CONECT 1121 1131 CONECT 1131 1121 1132 CONECT 1132 1131 1133 1140 CONECT 1133 1132 1134 1135 CONECT 1134 1133 CONECT 1135 1133 1136 CONECT 1136 1135 1137 1138 1139 CONECT 1137 1136 CONECT 1138 1136 CONECT 1139 1136 CONECT 1140 1132 1141 1142 CONECT 1141 1140 CONECT 1142 1140 MASTER 479 0 1 28 8 0 0 6 4834 3 13 70 END