HEADER TRANSFERASE 15-DEC-22 8BZP TITLE JNK3 (MITOGEN-ACTIVATED PROTEIN KINASE 10) IN COMPLEX WITH COMPOUND 23 TITLE 2 BEARING A C(SP3)F2BR MOIETY COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOGEN-ACTIVATED PROTEIN KINASE 10; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MAP KINASE 10,MAPK 10,MAP KINASE P49 3F12,STRESS-ACTIVATED COMPND 5 PROTEIN KINASE 1B,SAPK1B,STRESS-ACTIVATED PROTEIN KINASE JNK3,C-JUN COMPND 6 N-TERMINAL KINASE 3; COMPND 7 EC: 2.7.11.24; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MAPK10, JNK3, JNK3A, PRKM10, SAPK1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS FRAGMENT, CF2X, CF2BR, HALOGEN BOND, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.STAHLECKER,S.VAAS,T.STEHLE,F.M.BOECKLER REVDAT 2 23-AUG-23 8BZP 1 JRNL REVDAT 1 02-AUG-23 8BZP 0 JRNL AUTH S.VAAS,M.O.ZIMMERMANN,D.SCHOLLMEYER,J.STAHLECKER, JRNL AUTH 2 M.U.ENGELHARDT,J.RHEINGANZ,B.DROTLEFF,M.OLFERT, JRNL AUTH 3 M.LAMMERHOFER,M.KRAMER,T.STEHLE,F.M.BOECKLER JRNL TITL PRINCIPLES AND APPLICATIONS OF CF 2 X MOIETIES AS JRNL TITL 2 UNCONVENTIONAL HALOGEN BOND DONORS IN MEDICINAL CHEMISTRY, JRNL TITL 3 CHEMICAL BIOLOGY, AND DRUG DISCOVERY. JRNL REF J.MED.CHEM. V. 66 10202 2023 JRNL REFN ISSN 0022-2623 JRNL PMID 37487500 JRNL DOI 10.1021/ACS.JMEDCHEM.3C00634 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.84 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 63856 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.350 REMARK 3 FREE R VALUE TEST SET COUNT : 1501 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.8400 - 4.1400 0.99 5964 144 0.1767 0.1945 REMARK 3 2 4.1400 - 3.2800 0.99 5748 138 0.1670 0.1678 REMARK 3 3 3.2800 - 2.8700 0.99 5681 137 0.1934 0.2428 REMARK 3 4 2.8700 - 2.6100 1.00 5668 136 0.1907 0.2178 REMARK 3 5 2.6100 - 2.4200 1.00 5666 137 0.1845 0.2594 REMARK 3 6 2.4200 - 2.2800 0.99 5588 134 0.1845 0.2279 REMARK 3 7 2.2800 - 2.1600 0.99 5575 135 0.2076 0.2485 REMARK 3 8 2.1600 - 2.0700 1.00 5609 135 0.2141 0.2487 REMARK 3 9 2.0700 - 1.9900 1.00 5634 135 0.2328 0.3149 REMARK 3 10 1.9900 - 1.9200 1.00 5580 134 0.2939 0.3149 REMARK 3 11 1.9200 - 1.8600 1.00 5642 136 0.3973 0.4093 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.281 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.647 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5664 REMARK 3 ANGLE : 0.936 7683 REMARK 3 CHIRALITY : 0.060 853 REMARK 3 PLANARITY : 0.008 973 REMARK 3 DIHEDRAL : 14.338 2096 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 46 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.4839 12.8355 -15.3009 REMARK 3 T TENSOR REMARK 3 T11: 0.4933 T22: 0.4961 REMARK 3 T33: 0.3755 T12: 0.0156 REMARK 3 T13: 0.0125 T23: -0.0541 REMARK 3 L TENSOR REMARK 3 L11: 0.8410 L22: 0.5409 REMARK 3 L33: 1.0931 L12: 0.6526 REMARK 3 L13: 0.1334 L23: -0.1011 REMARK 3 S TENSOR REMARK 3 S11: -0.1688 S12: 0.0508 S13: 0.2664 REMARK 3 S21: -0.0964 S22: 0.0166 S23: -0.0235 REMARK 3 S31: 0.2441 S32: 0.0771 S33: 0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 84 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.9119 15.0107 0.2978 REMARK 3 T TENSOR REMARK 3 T11: 0.3752 T22: 0.3597 REMARK 3 T33: 0.3287 T12: 0.0045 REMARK 3 T13: -0.0007 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: 1.4554 L22: 0.5420 REMARK 3 L33: 1.5614 L12: 0.4998 REMARK 3 L13: -1.0004 L23: -0.0877 REMARK 3 S TENSOR REMARK 3 S11: -0.0489 S12: 0.1208 S13: 0.0264 REMARK 3 S21: -0.0517 S22: 0.0445 S23: -0.0272 REMARK 3 S31: 0.0394 S32: 0.0006 S33: 0.0001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4399 26.9596 12.3950 REMARK 3 T TENSOR REMARK 3 T11: 0.3129 T22: 0.2968 REMARK 3 T33: 0.2864 T12: -0.0273 REMARK 3 T13: 0.0143 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 1.9944 L22: 1.7990 REMARK 3 L33: 1.2551 L12: 0.2867 REMARK 3 L13: -0.4603 L23: 0.0759 REMARK 3 S TENSOR REMARK 3 S11: 0.0614 S12: -0.0771 S13: 0.3090 REMARK 3 S21: -0.0004 S22: 0.0568 S23: 0.0301 REMARK 3 S31: -0.1614 S32: 0.0163 S33: 0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 363 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.9267 17.4015 8.0780 REMARK 3 T TENSOR REMARK 3 T11: 0.4816 T22: 0.4726 REMARK 3 T33: 0.4901 T12: 0.0194 REMARK 3 T13: -0.0564 T23: -0.0552 REMARK 3 L TENSOR REMARK 3 L11: 0.3683 L22: 0.1621 REMARK 3 L33: 0.3202 L12: 0.2367 REMARK 3 L13: -0.3455 L23: -0.2307 REMARK 3 S TENSOR REMARK 3 S11: 0.1612 S12: -0.4689 S13: -0.0216 REMARK 3 S21: 0.5099 S22: -0.1165 S23: -0.1140 REMARK 3 S31: -0.1958 S32: 0.3016 S33: -0.0005 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 87 ) REMARK 3 ORIGIN FOR THE GROUP (A): -36.3782 19.9226 4.3911 REMARK 3 T TENSOR REMARK 3 T11: 0.3128 T22: 0.8406 REMARK 3 T33: 1.1334 T12: 0.0506 REMARK 3 T13: 0.0033 T23: 0.3698 REMARK 3 L TENSOR REMARK 3 L11: 0.0291 L22: 0.0960 REMARK 3 L33: 2.0374 L12: -0.0489 REMARK 3 L13: 0.2273 L23: -0.4436 REMARK 3 S TENSOR REMARK 3 S11: 0.4197 S12: 0.0996 S13: 0.1929 REMARK 3 S21: 0.0776 S22: 0.5534 S23: 0.7814 REMARK 3 S31: -0.0365 S32: -0.6054 S33: 0.6993 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 88 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5587 21.1055 4.3989 REMARK 3 T TENSOR REMARK 3 T11: 0.4003 T22: 0.4381 REMARK 3 T33: 0.5767 T12: 0.0351 REMARK 3 T13: 0.0749 T23: 0.0474 REMARK 3 L TENSOR REMARK 3 L11: 0.1463 L22: 2.1590 REMARK 3 L33: 0.8523 L12: 0.5722 REMARK 3 L13: -0.1904 L23: -0.6737 REMARK 3 S TENSOR REMARK 3 S11: 0.1095 S12: 0.0575 S13: 0.1252 REMARK 3 S21: 0.3240 S22: 0.1866 S23: 0.7387 REMARK 3 S31: -0.0766 S32: -0.3079 S33: -0.0003 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 258 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7320 19.3870 -3.6686 REMARK 3 T TENSOR REMARK 3 T11: 0.3586 T22: 0.3429 REMARK 3 T33: 0.3884 T12: -0.0029 REMARK 3 T13: -0.0104 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.6052 L22: 0.7806 REMARK 3 L33: 1.2718 L12: 0.2769 REMARK 3 L13: -0.1829 L23: 0.5316 REMARK 3 S TENSOR REMARK 3 S11: 0.1046 S12: 0.0434 S13: -0.2948 REMARK 3 S21: 0.0446 S22: -0.0459 S23: 0.2939 REMARK 3 S31: 0.1897 S32: -0.1559 S33: -0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 259 THROUGH 308 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.2839 9.5830 -14.3344 REMARK 3 T TENSOR REMARK 3 T11: 0.3800 T22: 0.3389 REMARK 3 T33: 0.4042 T12: -0.0009 REMARK 3 T13: 0.0390 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 0.6126 L22: 1.4894 REMARK 3 L33: 1.0683 L12: 0.0953 REMARK 3 L13: -0.7141 L23: 0.3746 REMARK 3 S TENSOR REMARK 3 S11: -0.0303 S12: 0.1214 S13: -0.3714 REMARK 3 S21: 0.1352 S22: -0.0268 S23: 0.1457 REMARK 3 S31: 0.2337 S32: 0.1432 S33: 0.0003 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 309 THROUGH 400 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.0936 26.2853 -1.4487 REMARK 3 T TENSOR REMARK 3 T11: 0.4137 T22: 0.3456 REMARK 3 T33: 0.3004 T12: 0.0297 REMARK 3 T13: -0.0126 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.1643 L22: 2.7713 REMARK 3 L33: 0.2111 L12: 1.0476 REMARK 3 L13: -0.3773 L23: -0.4501 REMARK 3 S TENSOR REMARK 3 S11: 0.1794 S12: -0.1217 S13: 0.1606 REMARK 3 S21: 0.1980 S22: -0.0997 S23: 0.0273 REMARK 3 S31: -0.2346 S32: -0.0141 S33: -0.0004 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8BZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-DEC-22. REMARK 100 THE DEPOSITION ID IS D_1292127459. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9188 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 63868 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 13.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 13.60 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.050 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4X21 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CONCENTRATED TO 7-9 MG/ML REMARK 280 AND INCUBATED WITH (FINAL CONC.): 1MM AMP-PCP, 0.4 MM REMARK 280 ZWITTERGENT AND 10% EG. PROTEIN WAS MIXED 2+2 UL WITH MOTHER REMARK 280 LIQUOR CONTAINING: 100 MM BISTRIS PH=6, PEG3350 27% AND NACL 200 REMARK 280 MM, PH 6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 54.89850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.68800 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.89850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.68800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 39 REMARK 465 SER A 40 REMARK 465 LYS A 41 REMARK 465 SER A 42 REMARK 465 LYS A 43 REMARK 465 VAL A 44 REMARK 465 ASP A 45 REMARK 465 ALA A 214 REMARK 465 GLY A 215 REMARK 465 THR A 216 REMARK 465 TYR A 223 REMARK 465 VAL A 224 REMARK 465 SER A 401 REMARK 465 GLU A 402 REMARK 465 MET B 39 REMARK 465 SER B 40 REMARK 465 LYS B 41 REMARK 465 SER B 42 REMARK 465 LYS B 43 REMARK 465 VAL B 44 REMARK 465 ASP B 45 REMARK 465 ASN B 46 REMARK 465 GLY B 54 REMARK 465 ASP B 55 REMARK 465 GLY B 71 REMARK 465 SER B 72 REMARK 465 GLY B 73 REMARK 465 ALA B 74 REMARK 465 ALA B 211 REMARK 465 ARG B 212 REMARK 465 THR B 213 REMARK 465 ALA B 214 REMARK 465 GLY B 215 REMARK 465 THR B 216 REMARK 465 SER B 217 REMARK 465 PHE B 218 REMARK 465 MET B 219 REMARK 465 MET B 220 REMARK 465 THR B 221 REMARK 465 PRO B 222 REMARK 465 TYR B 223 REMARK 465 VAL B 224 REMARK 465 VAL B 225 REMARK 465 TYR B 376 REMARK 465 ASP B 377 REMARK 465 LYS B 378 REMARK 465 GLN B 379 REMARK 465 LEU B 380 REMARK 465 ASP B 381 REMARK 465 GLU B 382 REMARK 465 SER B 401 REMARK 465 GLU B 402 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 LYS A 68 CD CE NZ REMARK 470 GLN A 75 CG CD OE1 NE2 REMARK 470 SER A 96 OG REMARK 470 ARG A 97 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 107 CZ NH1 NH2 REMARK 470 ARG A 110 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 111 CD OE1 OE2 REMARK 470 LYS A 134 CD CE NZ REMARK 470 GLU A 137 CG CD OE1 OE2 REMARK 470 GLU A 138 CG CD OE1 OE2 REMARK 470 GLN A 140 CG CD OE1 NE2 REMARK 470 GLU A 147 CG CD OE1 OE2 REMARK 470 ARG A 212 NE CZ NH1 NH2 REMARK 470 SER A 217 OG REMARK 470 THR A 221 OG1 CG2 REMARK 470 PRO A 222 C O REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 ARG A 295 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 303 CD CE NZ REMARK 470 LYS A 326 CD CE NZ REMARK 470 ILE A 375 CG1 CG2 CD1 REMARK 470 TYR A 376 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 378 CG CD CE NZ REMARK 470 GLN A 379 CG CD OE1 NE2 REMARK 470 GLU A 382 CG CD OE1 OE2 REMARK 470 ARG A 383 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 388 CG CD OE1 OE2 REMARK 470 GLU A 392 CG CD OE1 OE2 REMARK 470 LYS A 396 CD CE NZ REMARK 470 ASN A 400 CG OD1 ND2 REMARK 470 GLN B 47 CG CD OE1 NE2 REMARK 470 GLU B 52 CG CD OE1 OE2 REMARK 470 SER B 56 OG REMARK 470 LYS B 62 CG CD CE NZ REMARK 470 GLN B 65 CG CD OE1 NE2 REMARK 470 ASN B 66 CG OD1 ND2 REMARK 470 LYS B 68 CG CD CE NZ REMARK 470 ILE B 70 CG1 CG2 CD1 REMARK 470 GLN B 75 CG CD OE1 NE2 REMARK 470 ILE B 77 CG1 CG2 CD1 REMARK 470 VAL B 85 CG1 CG2 REMARK 470 LEU B 86 CG CD1 CD2 REMARK 470 GLN B 102 CG CD OE1 NE2 REMARK 470 LYS B 106 CD CE NZ REMARK 470 ARG B 107 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 116 CD CE NZ REMARK 470 LYS B 134 CG CD CE NZ REMARK 470 GLU B 137 CG CD OE1 OE2 REMARK 470 GLU B 138 CG CD OE1 OE2 REMARK 470 GLU B 164 CD OE1 OE2 REMARK 470 LYS B 198 CE NZ REMARK 470 LEU B 210 CG CD1 CD2 REMARK 470 ARG B 227 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 260 CG CD CE NZ REMARK 470 ARG B 266 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 285 CG CD OE1 OE2 REMARK 470 LYS B 288 CG CD CE NZ REMARK 470 LYS B 289 CG CD CE NZ REMARK 470 GLN B 291 CD OE1 NE2 REMARK 470 ARG B 295 CZ NH1 NH2 REMARK 470 LYS B 303 CD CE NZ REMARK 470 GLU B 323 CG CD OE1 OE2 REMARK 470 ARG B 383 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 384 CG CD OE1 OE2 REMARK 470 LYS B 396 CD CE NZ REMARK 470 ASN B 400 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 140 -32.64 -131.11 REMARK 500 ARG A 188 -3.99 68.45 REMARK 500 ALA A 211 -128.45 64.38 REMARK 500 ASP A 381 -1.30 69.02 REMARK 500 LYS B 241 -169.84 -126.80 REMARK 500 THR B 308 149.77 77.23 REMARK 500 ALA B 320 42.56 -144.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 SWM B 502 REMARK 610 C15 B 509 REMARK 610 C15 B 510 DBREF 8BZP A 39 402 UNP P53779 MK10_HUMAN 1 364 DBREF 8BZP B 39 402 UNP P53779 MK10_HUMAN 1 364 SEQRES 1 A 364 MET SER LYS SER LYS VAL ASP ASN GLN PHE TYR SER VAL SEQRES 2 A 364 GLU VAL GLY ASP SER THR PHE THR VAL LEU LYS ARG TYR SEQRES 3 A 364 GLN ASN LEU LYS PRO ILE GLY SER GLY ALA GLN GLY ILE SEQRES 4 A 364 VAL CYS ALA ALA TYR ASP ALA VAL LEU ASP ARG ASN VAL SEQRES 5 A 364 ALA ILE LYS LYS LEU SER ARG PRO PHE GLN ASN GLN THR SEQRES 6 A 364 HIS ALA LYS ARG ALA TYR ARG GLU LEU VAL LEU MET LYS SEQRES 7 A 364 CYS VAL ASN HIS LYS ASN ILE ILE SER LEU LEU ASN VAL SEQRES 8 A 364 PHE THR PRO GLN LYS THR LEU GLU GLU PHE GLN ASP VAL SEQRES 9 A 364 TYR LEU VAL MET GLU LEU MET ASP ALA ASN LEU CYS GLN SEQRES 10 A 364 VAL ILE GLN MET GLU LEU ASP HIS GLU ARG MET SER TYR SEQRES 11 A 364 LEU LEU TYR GLN MET LEU CYS GLY ILE LYS HIS LEU HIS SEQRES 12 A 364 SER ALA GLY ILE ILE HIS ARG ASP LEU LYS PRO SER ASN SEQRES 13 A 364 ILE VAL VAL LYS SER ASP CYS THR LEU LYS ILE LEU ASP SEQRES 14 A 364 PHE GLY LEU ALA ARG THR ALA GLY THR SER PHE MET MET SEQRES 15 A 364 THR PRO TYR VAL VAL THR ARG TYR TYR ARG ALA PRO GLU SEQRES 16 A 364 VAL ILE LEU GLY MET GLY TYR LYS GLU ASN VAL ASP ILE SEQRES 17 A 364 TRP SER VAL GLY CYS ILE MET GLY GLU MET VAL ARG HIS SEQRES 18 A 364 LYS ILE LEU PHE PRO GLY ARG ASP TYR ILE ASP GLN TRP SEQRES 19 A 364 ASN LYS VAL ILE GLU GLN LEU GLY THR PRO CYS PRO GLU SEQRES 20 A 364 PHE MET LYS LYS LEU GLN PRO THR VAL ARG ASN TYR VAL SEQRES 21 A 364 GLU ASN ARG PRO LYS TYR ALA GLY LEU THR PHE PRO LYS SEQRES 22 A 364 LEU PHE PRO ASP SER LEU PHE PRO ALA ASP SER GLU HIS SEQRES 23 A 364 ASN LYS LEU LYS ALA SER GLN ALA ARG ASP LEU LEU SER SEQRES 24 A 364 LYS MET LEU VAL ILE ASP PRO ALA LYS ARG ILE SER VAL SEQRES 25 A 364 ASP ASP ALA LEU GLN HIS PRO TYR ILE ASN VAL TRP TYR SEQRES 26 A 364 ASP PRO ALA GLU VAL GLU ALA PRO PRO PRO GLN ILE TYR SEQRES 27 A 364 ASP LYS GLN LEU ASP GLU ARG GLU HIS THR ILE GLU GLU SEQRES 28 A 364 TRP LYS GLU LEU ILE TYR LYS GLU VAL MET ASN SER GLU SEQRES 1 B 364 MET SER LYS SER LYS VAL ASP ASN GLN PHE TYR SER VAL SEQRES 2 B 364 GLU VAL GLY ASP SER THR PHE THR VAL LEU LYS ARG TYR SEQRES 3 B 364 GLN ASN LEU LYS PRO ILE GLY SER GLY ALA GLN GLY ILE SEQRES 4 B 364 VAL CYS ALA ALA TYR ASP ALA VAL LEU ASP ARG ASN VAL SEQRES 5 B 364 ALA ILE LYS LYS LEU SER ARG PRO PHE GLN ASN GLN THR SEQRES 6 B 364 HIS ALA LYS ARG ALA TYR ARG GLU LEU VAL LEU MET LYS SEQRES 7 B 364 CYS VAL ASN HIS LYS ASN ILE ILE SER LEU LEU ASN VAL SEQRES 8 B 364 PHE THR PRO GLN LYS THR LEU GLU GLU PHE GLN ASP VAL SEQRES 9 B 364 TYR LEU VAL MET GLU LEU MET ASP ALA ASN LEU CYS GLN SEQRES 10 B 364 VAL ILE GLN MET GLU LEU ASP HIS GLU ARG MET SER TYR SEQRES 11 B 364 LEU LEU TYR GLN MET LEU CYS GLY ILE LYS HIS LEU HIS SEQRES 12 B 364 SER ALA GLY ILE ILE HIS ARG ASP LEU LYS PRO SER ASN SEQRES 13 B 364 ILE VAL VAL LYS SER ASP CYS THR LEU LYS ILE LEU ASP SEQRES 14 B 364 PHE GLY LEU ALA ARG THR ALA GLY THR SER PHE MET MET SEQRES 15 B 364 THR PRO TYR VAL VAL THR ARG TYR TYR ARG ALA PRO GLU SEQRES 16 B 364 VAL ILE LEU GLY MET GLY TYR LYS GLU ASN VAL ASP ILE SEQRES 17 B 364 TRP SER VAL GLY CYS ILE MET GLY GLU MET VAL ARG HIS SEQRES 18 B 364 LYS ILE LEU PHE PRO GLY ARG ASP TYR ILE ASP GLN TRP SEQRES 19 B 364 ASN LYS VAL ILE GLU GLN LEU GLY THR PRO CYS PRO GLU SEQRES 20 B 364 PHE MET LYS LYS LEU GLN PRO THR VAL ARG ASN TYR VAL SEQRES 21 B 364 GLU ASN ARG PRO LYS TYR ALA GLY LEU THR PHE PRO LYS SEQRES 22 B 364 LEU PHE PRO ASP SER LEU PHE PRO ALA ASP SER GLU HIS SEQRES 23 B 364 ASN LYS LEU LYS ALA SER GLN ALA ARG ASP LEU LEU SER SEQRES 24 B 364 LYS MET LEU VAL ILE ASP PRO ALA LYS ARG ILE SER VAL SEQRES 25 B 364 ASP ASP ALA LEU GLN HIS PRO TYR ILE ASN VAL TRP TYR SEQRES 26 B 364 ASP PRO ALA GLU VAL GLU ALA PRO PRO PRO GLN ILE TYR SEQRES 27 B 364 ASP LYS GLN LEU ASP GLU ARG GLU HIS THR ILE GLU GLU SEQRES 28 B 364 TRP LYS GLU LEU ILE TYR LYS GLU VAL MET ASN SER GLU HET SWM A 501 36 HET EDO A 502 4 HET EDO A 503 4 HET GOL A 504 6 HET BME A 505 4 HET PEG A 506 7 HET GOL A 507 6 HET EDO A 508 4 HET EDO A 509 4 HET PEG A 510 7 HET GOL A 511 6 HET C15 A 512 22 HET GOL B 501 6 HET SWM B 502 13 HET EDO B 503 4 HET EDO B 504 4 HET GOL B 505 6 HET GOL B 506 6 HET GOL B 507 6 HET GOL B 508 6 HET C15 B 509 16 HET C15 B 510 12 HET CL B 511 1 HETNAM SWM 2-BROMANYL-2,2-BIS(FLUORANYL)-~{N}-(5-PYRIDIN-4-YL-1,3, HETNAM 2 SWM 4-THIADIAZOL-2-YL)ETHANAMIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETNAM BME BETA-MERCAPTOETHANOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM C15 N-DODECYL-N,N-DIMETHYL-3-AMMONIO-1-PROPANESULFONATE HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SWM 2(C9 H5 BR F2 N4 O S) FORMUL 4 EDO 6(C2 H6 O2) FORMUL 6 GOL 8(C3 H8 O3) FORMUL 7 BME C2 H6 O S FORMUL 8 PEG 2(C4 H10 O3) FORMUL 14 C15 3(C17 H38 N O3 S 1+) FORMUL 25 CL CL 1- FORMUL 26 HOH *287(H2 O) HELIX 1 AA1 ASN A 101 VAL A 118 1 18 HELIX 2 AA2 LEU A 153 GLN A 158 1 6 HELIX 3 AA3 ASP A 162 ALA A 183 1 22 HELIX 4 AA4 LYS A 191 SER A 193 5 3 HELIX 5 AA5 ALA A 231 LEU A 236 1 6 HELIX 6 AA6 ASN A 243 HIS A 259 1 17 HELIX 7 AA7 ASP A 267 GLY A 280 1 14 HELIX 8 AA8 CYS A 283 LEU A 290 1 8 HELIX 9 AA9 THR A 293 ASN A 300 1 8 HELIX 10 AB1 THR A 308 PHE A 313 1 6 HELIX 11 AB2 PRO A 314 PHE A 318 5 5 HELIX 12 AB3 SER A 322 LEU A 340 1 19 HELIX 13 AB4 ASP A 343 ARG A 347 5 5 HELIX 14 AB5 SER A 349 HIS A 356 1 8 HELIX 15 AB6 HIS A 356 VAL A 361 1 6 HELIX 16 AB7 ASP A 364 GLU A 369 1 6 HELIX 17 AB8 THR A 386 ASN A 400 1 15 HELIX 18 AB9 ASN B 101 VAL B 118 1 18 HELIX 19 AC1 LEU B 153 MET B 159 1 7 HELIX 20 AC2 ASP B 162 ALA B 183 1 22 HELIX 21 AC3 LYS B 191 SER B 193 5 3 HELIX 22 AC4 ALA B 231 LEU B 236 1 6 HELIX 23 AC5 ASN B 243 HIS B 259 1 17 HELIX 24 AC6 ASP B 267 GLY B 280 1 14 HELIX 25 AC7 CYS B 283 LYS B 289 1 7 HELIX 26 AC8 GLN B 291 ARG B 301 1 11 HELIX 27 AC9 THR B 308 PHE B 313 1 6 HELIX 28 AD1 PRO B 314 PHE B 318 5 5 HELIX 29 AD2 SER B 322 LEU B 340 1 19 HELIX 30 AD3 SER B 349 GLN B 355 1 7 HELIX 31 AD4 ILE B 359 TYR B 363 5 5 HELIX 32 AD5 ASP B 364 GLU B 369 1 6 HELIX 33 AD6 THR B 386 ASN B 400 1 15 SHEET 1 AA1 2 PHE A 48 VAL A 53 0 SHEET 2 AA1 2 SER A 56 LEU A 61 -1 O SER A 56 N VAL A 53 SHEET 1 AA2 5 TYR A 64 SER A 72 0 SHEET 2 AA2 5 GLY A 76 ASP A 83 -1 O ALA A 80 N LYS A 68 SHEET 3 AA2 5 ARG A 88 LEU A 95 -1 O ILE A 92 N CYS A 79 SHEET 4 AA2 5 TYR A 143 GLU A 147 -1 O MET A 146 N ALA A 91 SHEET 5 AA2 5 LEU A 126 PHE A 130 -1 N LEU A 127 O VAL A 145 SHEET 1 AA3 3 ALA A 151 ASN A 152 0 SHEET 2 AA3 3 ILE A 195 VAL A 197 -1 O VAL A 197 N ALA A 151 SHEET 3 AA3 3 LEU A 203 ILE A 205 -1 O LYS A 204 N VAL A 196 SHEET 1 AA4 2 PHE B 48 VAL B 51 0 SHEET 2 AA4 2 PHE B 58 LEU B 61 -1 O VAL B 60 N TYR B 49 SHEET 1 AA5 5 TYR B 64 PRO B 69 0 SHEET 2 AA5 5 ILE B 77 ASP B 83 -1 O ALA B 80 N LYS B 68 SHEET 3 AA5 5 ARG B 88 SER B 96 -1 O VAL B 90 N ALA B 81 SHEET 4 AA5 5 ASP B 141 GLU B 147 -1 O VAL B 142 N LEU B 95 SHEET 5 AA5 5 LEU B 126 PHE B 130 -1 N LEU B 127 O VAL B 145 SHEET 1 AA6 3 ALA B 151 ASN B 152 0 SHEET 2 AA6 3 ILE B 195 VAL B 197 -1 O VAL B 197 N ALA B 151 SHEET 3 AA6 3 LEU B 203 ILE B 205 -1 O LYS B 204 N VAL B 196 LINK SG CYS A 201 S2 BME A 505 1555 1555 2.01 CRYST1 109.797 155.376 43.960 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009108 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006436 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022748 0.00000