HEADER OXIDOREDUCTASE 26-DEC-22 8C3M TITLE CRYSTAL STRUCTURE OF FERREDOXIN/FLAVODOXIN NADP+ OXIDOREDUCTASE 1 TITLE 2 (FNR1) V329H MUTANT FROM BACILLUS CEREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERREDOXIN--NADP REDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: FNR,FD-NADP(+) REDUCTASE; COMPND 5 EC: 1.18.1.2; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS CEREUS ATCC 14579; SOURCE 3 ORGANISM_TAXID: 226900; SOURCE 4 GENE: BC_0385; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET22B(+) KEYWDS FERREDOXIN/FLAVODOXIN REDUCTASE, ELECTRON TRANSFER, FAD, KEYWDS 2 FLAVOPROTEIN, OXIDOREDUCTASE, MUTANT EXPDTA X-RAY DIFFRACTION AUTHOR S.A.B.DAHLEN,M.HAMMERSTAD,H.-P.HERSLETH REVDAT 3 07-FEB-24 8C3M 1 REMARK REVDAT 2 02-AUG-23 8C3M 1 REMARK REVDAT 1 12-JUL-23 8C3M 0 JRNL AUTH M.HAMMERSTAD,A.K.RUGTVEIT,S.DAHLEN,H.K.ANDERSEN,H.P.HERSLETH JRNL TITL FUNCTIONAL DIVERSITY OF HOMOLOGOUS OXIDOREDUCTASES-TUNING OF JRNL TITL 2 SUBSTRATE SPECIFICITY BY A FAD-STACKING RESIDUE FOR IRON JRNL TITL 3 ACQUISITION AND FLAVODOXIN REDUCTION. JRNL REF ANTIOXIDANTS V. 12 2023 JRNL REFN ESSN 2076-3921 JRNL PMID 37371954 JRNL DOI 10.3390/ANTIOX12061224 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 3 NUMBER OF REFLECTIONS : 26768 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1343 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 53.8100 - 5.6000 0.90 2583 122 0.1722 0.2082 REMARK 3 2 5.6000 - 4.4500 0.93 2491 149 0.1560 0.1976 REMARK 3 3 4.4500 - 3.8800 0.94 2541 126 0.1511 0.2244 REMARK 3 4 3.8800 - 3.5300 0.96 2559 128 0.1677 0.2077 REMARK 3 5 3.5300 - 3.2800 0.95 2537 132 0.1946 0.2785 REMARK 3 6 3.2800 - 3.0800 0.96 2541 130 0.2375 0.2889 REMARK 3 7 3.0800 - 2.9300 0.97 2558 145 0.2436 0.2956 REMARK 3 8 2.9300 - 2.8000 0.98 2547 135 0.2470 0.2827 REMARK 3 9 2.8000 - 2.6900 0.98 2541 148 0.2634 0.3123 REMARK 3 10 2.6900 - 2.6000 0.97 2527 128 0.2956 0.3233 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.329 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.543 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.76 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5677 REMARK 3 ANGLE : 0.981 7690 REMARK 3 CHIRALITY : 0.060 851 REMARK 3 PLANARITY : 0.007 982 REMARK 3 DIHEDRAL : 15.309 2061 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 4 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.4201 15.9763 -11.2048 REMARK 3 T TENSOR REMARK 3 T11: 0.4059 T22: 0.4065 REMARK 3 T33: 0.5032 T12: -0.0476 REMARK 3 T13: 0.0662 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 3.3046 L22: 3.1431 REMARK 3 L33: 2.8777 L12: -1.0410 REMARK 3 L13: 0.5991 L23: -0.2848 REMARK 3 S TENSOR REMARK 3 S11: -0.1094 S12: -0.3440 S13: -0.3744 REMARK 3 S21: 0.2438 S22: 0.1763 S23: 0.3787 REMARK 3 S31: 0.3342 S32: -0.3203 S33: -0.0824 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 253 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.6648 38.1885 7.3592 REMARK 3 T TENSOR REMARK 3 T11: 0.8681 T22: 0.8775 REMARK 3 T33: 0.8670 T12: 0.0386 REMARK 3 T13: 0.2089 T23: -0.1204 REMARK 3 L TENSOR REMARK 3 L11: 4.4464 L22: 4.8922 REMARK 3 L33: 4.1890 L12: -4.0777 REMARK 3 L13: -1.1429 L23: 1.6956 REMARK 3 S TENSOR REMARK 3 S11: -0.4575 S12: -0.7995 S13: -0.0769 REMARK 3 S21: 1.2226 S22: 0.1591 S23: 0.7188 REMARK 3 S31: -0.2786 S32: -0.5978 S33: 0.2090 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 254 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.7527 18.2434 -19.7900 REMARK 3 T TENSOR REMARK 3 T11: 0.3757 T22: 0.3314 REMARK 3 T33: 0.4950 T12: 0.0091 REMARK 3 T13: 0.0804 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 4.8548 L22: 2.6318 REMARK 3 L33: 3.7656 L12: 0.3288 REMARK 3 L13: 1.8110 L23: 0.4994 REMARK 3 S TENSOR REMARK 3 S11: -0.1020 S12: -0.0421 S13: -0.1397 REMARK 3 S21: -0.1768 S22: -0.0266 S23: 0.1189 REMARK 3 S31: 0.2902 S32: -0.1244 S33: 0.0951 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 138 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.8801 37.3581 -38.5057 REMARK 3 T TENSOR REMARK 3 T11: 0.4244 T22: 0.4063 REMARK 3 T33: 0.5435 T12: 0.0439 REMARK 3 T13: -0.0881 T23: 0.0455 REMARK 3 L TENSOR REMARK 3 L11: 2.5335 L22: 3.2925 REMARK 3 L33: 1.7899 L12: 0.2493 REMARK 3 L13: 0.3848 L23: 0.0435 REMARK 3 S TENSOR REMARK 3 S11: -0.1514 S12: 0.2900 S13: 0.4217 REMARK 3 S21: -0.4347 S22: -0.0018 S23: 0.1835 REMARK 3 S31: -0.3013 S32: -0.1356 S33: 0.1674 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 139 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): -35.9402 15.3365 -48.4979 REMARK 3 T TENSOR REMARK 3 T11: 0.5718 T22: 0.5742 REMARK 3 T33: 0.7046 T12: 0.0379 REMARK 3 T13: -0.1904 T23: -0.1357 REMARK 3 L TENSOR REMARK 3 L11: 3.1526 L22: 6.2768 REMARK 3 L33: 8.9236 L12: 3.0878 REMARK 3 L13: 0.2334 L23: -0.0736 REMARK 3 S TENSOR REMARK 3 S11: 0.0868 S12: 0.2787 S13: -0.3379 REMARK 3 S21: -0.2229 S22: 0.4659 S23: -0.1630 REMARK 3 S31: 0.0552 S32: 0.1441 S33: -0.4905 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 184 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1156 11.5051 -58.7998 REMARK 3 T TENSOR REMARK 3 T11: 1.0311 T22: 0.8195 REMARK 3 T33: 0.7577 T12: -0.0444 REMARK 3 T13: -0.1573 T23: -0.2412 REMARK 3 L TENSOR REMARK 3 L11: 7.9233 L22: 8.8420 REMARK 3 L33: 6.2024 L12: 0.3512 REMARK 3 L13: -1.8772 L23: -0.9180 REMARK 3 S TENSOR REMARK 3 S11: -0.4357 S12: 1.3866 S13: -0.6782 REMARK 3 S21: -1.0758 S22: 0.0750 S23: -0.1153 REMARK 3 S31: 0.4033 S32: 0.2273 S33: 0.3261 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 238 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7144 31.4410 -37.8479 REMARK 3 T TENSOR REMARK 3 T11: 0.4275 T22: 0.4089 REMARK 3 T33: 0.4612 T12: 0.0087 REMARK 3 T13: -0.0008 T23: 0.0184 REMARK 3 L TENSOR REMARK 3 L11: 3.8592 L22: 2.4126 REMARK 3 L33: 1.9230 L12: 1.2029 REMARK 3 L13: 1.6946 L23: 0.8000 REMARK 3 S TENSOR REMARK 3 S11: -0.1515 S12: 0.4688 S13: -0.0404 REMARK 3 S21: -0.3440 S22: 0.0673 S23: 0.0475 REMARK 3 S31: -0.2043 S32: 0.1780 S33: 0.0633 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 320 THROUGH 349 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.8260 42.8458 -15.4951 REMARK 3 T TENSOR REMARK 3 T11: 0.7135 T22: 0.7705 REMARK 3 T33: 0.7254 T12: 0.2123 REMARK 3 T13: -0.1388 T23: -0.2273 REMARK 3 L TENSOR REMARK 3 L11: 9.1328 L22: 6.2537 REMARK 3 L33: 5.5091 L12: 3.0585 REMARK 3 L13: -0.3865 L23: -0.4446 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: -1.8288 S13: 1.0847 REMARK 3 S21: 0.1760 S22: -0.2684 S23: 0.8165 REMARK 3 S31: -0.8636 S32: -0.9102 S33: 0.2000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 4 through 39 or REMARK 3 resid 41 through 61 or resid 63 through REMARK 3 92 or resid 94 through 325 or resid 327 REMARK 3 through 349 or resid 401)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 4 through 39 or REMARK 3 resid 41 through 61 or resid 63 through REMARK 3 92 or resid 94 through 325 or resid 327 REMARK 3 through 349 or resid 401)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8C3M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292127702. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976254 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26835 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 53.810 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.08700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.72 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.49800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6GAR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 42 MG/ML PROTEIN (1:1) 12.5% W/V PEG REMARK 280 1000, 12.5% W/V PEG 3350, 12.5% V/V MPD, 0.02 M SODIUM FORMATE, REMARK 280 0.02 M AMMONIUM ACETATE, 0.02 M TRISODIUM CITRATE, 0.02 M SODIUM REMARK 280 POTASSIUM L-TARTRATE, 0.02 M SODIUM OXAMATE, 0.1 M MOPS/HEPES-NA REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 82.30600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.46750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 82.30600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 28.46750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 29960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 530 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ARG A 3 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ARG B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER B 202 O HOH B 501 2.11 REMARK 500 OE2 GLU A 173 OG SER A 201 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 5 41.75 -86.74 REMARK 500 TYR A 48 54.21 -142.21 REMARK 500 SER A 139 -90.09 -114.74 REMARK 500 SER A 189 45.63 -74.47 REMARK 500 SER A 201 -166.70 -114.80 REMARK 500 HIS A 220 -167.98 -113.45 REMARK 500 THR A 233 -67.02 -90.87 REMARK 500 TYR A 270 -55.87 -139.26 REMARK 500 GLU B 5 46.46 -86.36 REMARK 500 TYR B 48 52.95 -141.87 REMARK 500 SER B 139 -88.11 -119.66 REMARK 500 ASN B 163 -116.52 19.24 REMARK 500 LYS B 185 -161.72 -101.31 REMARK 500 SER B 189 46.22 -72.68 REMARK 500 SER B 201 -166.36 -113.85 REMARK 500 SER B 202 31.19 -84.83 REMARK 500 HIS B 220 -166.21 -115.67 REMARK 500 THR B 233 -66.43 -92.05 REMARK 500 TYR B 270 -57.91 -140.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6GAR RELATED DB: PDB REMARK 900 NATIVE STRUCTURE DBREF 8C3M A 1 349 UNP Q81IK1 Q81IK1_BACCR 1 349 DBREF 8C3M B 1 349 UNP Q81IK1 Q81IK1_BACCR 1 349 SEQADV 8C3M HIS A 329 UNP Q81IK1 VAL 329 ENGINEERED MUTATION SEQADV 8C3M HIS B 329 UNP Q81IK1 VAL 329 ENGINEERED MUTATION SEQRES 1 A 349 MET ASN ARG GLU GLU LEU PHE ASP VAL THR VAL ILE GLY SEQRES 2 A 349 GLY GLY PRO ALA GLY LEU TYR SER ALA PHE TYR SER GLY SEQRES 3 A 349 LEU ARG GLU MET ARG THR LYS ILE ILE GLU PHE HIS PRO SEQRES 4 A 349 HIS LEU GLY GLY LYS ILE HIS VAL TYR PRO GLU LYS MET SEQRES 5 A 349 ILE TRP ASP VAL GLY GLY LEU LEU PRO VAL THR GLY ASP SEQRES 6 A 349 LYS LEU ILE GLU GLN LEU VAL GLN GLN GLY LEU THR PHE SEQRES 7 A 349 LYS PRO GLU VAL VAL LEU ASP THR LYS VAL GLU SER ILE SEQRES 8 A 349 ILE ARG ASN GLN ASP GLY THR PHE THR LEU LYS THR SER SEQRES 9 A 349 THR GLY GLU GLU HIS PHE SER LYS THR VAL ILE VAL ALA SEQRES 10 A 349 THR GLY SER GLY ILE LEU LYS PRO GLN LYS LEU SER ILE SEQRES 11 A 349 GLU GLY ALA GLU ARG PHE GLU VAL SER ASN LEU ASN TYR SEQRES 12 A 349 THR VAL LYS SER LEU LYS ARG PHE LYS GLY LYS THR VAL SEQRES 13 A 349 ILE ILE SER GLY GLY GLY ASN SER ALA VAL ASP TRP ALA SEQRES 14 A 349 ASN GLU LEU GLU PRO ILE ALA LYS LYS VAL TYR VAL THR SEQRES 15 A 349 TYR ARG LYS GLU GLU LEU SER GLY HIS GLU ALA GLN VAL SEQRES 16 A 349 LYS GLN LEU MET ASN SER SER ALA GLU CYS PHE PHE ASN SEQRES 17 A 349 THR SER ILE THR LYS LEU ILE ALA GLY ASP ASN HIS GLU SEQRES 18 A 349 ALA ILE GLU TYR VAL GLU LEU THR ASN HIS GLU THR GLY SEQRES 19 A 349 GLU VAL SER HIS LEU PRO ILE ASP GLU VAL ILE ILE ASN SEQRES 20 A 349 HIS GLY TYR GLU ARG ASP ILE THR LEU LEU GLU ASN SER SEQRES 21 A 349 GLU LEU ASP VAL ALA ILE ILE ASP ASN TYR TYR ILE ALA SEQRES 22 A 349 GLY ASN ALA ASN SER GLU SER SER VAL ASP GLY LEU TYR SEQRES 23 A 349 ALA ALA GLY ASP ILE LEU LYS HIS GLU GLY LYS LEU HIS SEQRES 24 A 349 LEU ILE ALA GLY ALA PHE GLN ASP ALA GLY ASN ALA VAL SEQRES 25 A 349 ASN LYS ALA LYS GLN PHE ILE GLN PRO ASP ALA SER GLU SEQRES 26 A 349 TYR GLY MET HIS SER SER HIS ASN GLU VAL PHE LYS LYS SEQRES 27 A 349 ARG ASN ARG GLU LEU ILE LYS GLN MET MET LYS SEQRES 1 B 349 MET ASN ARG GLU GLU LEU PHE ASP VAL THR VAL ILE GLY SEQRES 2 B 349 GLY GLY PRO ALA GLY LEU TYR SER ALA PHE TYR SER GLY SEQRES 3 B 349 LEU ARG GLU MET ARG THR LYS ILE ILE GLU PHE HIS PRO SEQRES 4 B 349 HIS LEU GLY GLY LYS ILE HIS VAL TYR PRO GLU LYS MET SEQRES 5 B 349 ILE TRP ASP VAL GLY GLY LEU LEU PRO VAL THR GLY ASP SEQRES 6 B 349 LYS LEU ILE GLU GLN LEU VAL GLN GLN GLY LEU THR PHE SEQRES 7 B 349 LYS PRO GLU VAL VAL LEU ASP THR LYS VAL GLU SER ILE SEQRES 8 B 349 ILE ARG ASN GLN ASP GLY THR PHE THR LEU LYS THR SER SEQRES 9 B 349 THR GLY GLU GLU HIS PHE SER LYS THR VAL ILE VAL ALA SEQRES 10 B 349 THR GLY SER GLY ILE LEU LYS PRO GLN LYS LEU SER ILE SEQRES 11 B 349 GLU GLY ALA GLU ARG PHE GLU VAL SER ASN LEU ASN TYR SEQRES 12 B 349 THR VAL LYS SER LEU LYS ARG PHE LYS GLY LYS THR VAL SEQRES 13 B 349 ILE ILE SER GLY GLY GLY ASN SER ALA VAL ASP TRP ALA SEQRES 14 B 349 ASN GLU LEU GLU PRO ILE ALA LYS LYS VAL TYR VAL THR SEQRES 15 B 349 TYR ARG LYS GLU GLU LEU SER GLY HIS GLU ALA GLN VAL SEQRES 16 B 349 LYS GLN LEU MET ASN SER SER ALA GLU CYS PHE PHE ASN SEQRES 17 B 349 THR SER ILE THR LYS LEU ILE ALA GLY ASP ASN HIS GLU SEQRES 18 B 349 ALA ILE GLU TYR VAL GLU LEU THR ASN HIS GLU THR GLY SEQRES 19 B 349 GLU VAL SER HIS LEU PRO ILE ASP GLU VAL ILE ILE ASN SEQRES 20 B 349 HIS GLY TYR GLU ARG ASP ILE THR LEU LEU GLU ASN SER SEQRES 21 B 349 GLU LEU ASP VAL ALA ILE ILE ASP ASN TYR TYR ILE ALA SEQRES 22 B 349 GLY ASN ALA ASN SER GLU SER SER VAL ASP GLY LEU TYR SEQRES 23 B 349 ALA ALA GLY ASP ILE LEU LYS HIS GLU GLY LYS LEU HIS SEQRES 24 B 349 LEU ILE ALA GLY ALA PHE GLN ASP ALA GLY ASN ALA VAL SEQRES 25 B 349 ASN LYS ALA LYS GLN PHE ILE GLN PRO ASP ALA SER GLU SEQRES 26 B 349 TYR GLY MET HIS SER SER HIS ASN GLU VAL PHE LYS LYS SEQRES 27 B 349 ARG ASN ARG GLU LEU ILE LYS GLN MET MET LYS HET FAD A 401 53 HET OXM A 402 6 HET FAD B 401 53 HET ACT B 402 4 HET OXM B 403 6 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM OXM OXAMIC ACID HETNAM ACT ACETATE ION FORMUL 3 FAD 2(C27 H33 N9 O15 P2) FORMUL 4 OXM 2(C2 H3 N O3) FORMUL 6 ACT C2 H3 O2 1- FORMUL 8 HOH *59(H2 O) HELIX 1 AA1 GLY A 15 ARG A 28 1 14 HELIX 2 AA2 GLY A 42 TYR A 48 5 7 HELIX 3 AA3 GLY A 64 LEU A 76 1 13 HELIX 4 AA4 GLY A 132 GLU A 137 5 6 HELIX 5 AA5 LEU A 148 LYS A 152 5 5 HELIX 6 AA6 GLY A 162 GLU A 173 1 12 HELIX 7 AA7 HIS A 191 ASN A 200 1 10 HELIX 8 AA8 LEU A 300 GLN A 320 1 21 HELIX 9 AA9 HIS A 329 VAL A 335 5 7 HELIX 10 AB1 PHE A 336 MET A 348 1 13 HELIX 11 AB2 GLY B 15 ARG B 28 1 14 HELIX 12 AB3 GLY B 42 TYR B 48 5 7 HELIX 13 AB4 GLY B 64 THR B 77 1 14 HELIX 14 AB5 GLY B 132 SER B 139 5 8 HELIX 15 AB6 LEU B 148 LYS B 152 5 5 HELIX 16 AB7 SER B 164 GLU B 173 1 10 HELIX 17 AB8 HIS B 191 SER B 201 1 11 HELIX 18 AB9 LEU B 300 GLN B 320 1 21 HELIX 19 AC1 HIS B 329 VAL B 335 5 7 HELIX 20 AC2 PHE B 336 MET B 348 1 13 SHEET 1 AA1 6 GLU A 81 VAL A 83 0 SHEET 2 AA1 6 THR A 32 ILE A 35 1 N ILE A 34 O VAL A 83 SHEET 3 AA1 6 LEU A 6 ILE A 12 1 N VAL A 11 O ILE A 35 SHEET 4 AA1 6 GLU A 108 VAL A 116 1 O LYS A 112 N PHE A 7 SHEET 5 AA1 6 PHE A 99 THR A 103 -1 N LEU A 101 O HIS A 109 SHEET 6 AA1 6 VAL A 88 ARG A 93 -1 N GLU A 89 O LYS A 102 SHEET 1 AA2 5 GLU A 81 VAL A 83 0 SHEET 2 AA2 5 THR A 32 ILE A 35 1 N ILE A 34 O VAL A 83 SHEET 3 AA2 5 LEU A 6 ILE A 12 1 N VAL A 11 O ILE A 35 SHEET 4 AA2 5 GLU A 108 VAL A 116 1 O LYS A 112 N PHE A 7 SHEET 5 AA2 5 LEU A 285 ALA A 287 1 O TYR A 286 N VAL A 116 SHEET 1 AA3 2 MET A 52 ILE A 53 0 SHEET 2 AA3 2 VAL A 62 THR A 63 -1 O VAL A 62 N ILE A 53 SHEET 1 AA4 2 ILE A 122 PRO A 125 0 SHEET 2 AA4 2 TYR A 250 ASP A 253 -1 O GLU A 251 N LYS A 124 SHEET 1 AA5 5 LEU A 141 ASN A 142 0 SHEET 2 AA5 5 GLU A 243 ILE A 246 1 O VAL A 244 N ASN A 142 SHEET 3 AA5 5 THR A 155 SER A 159 1 N SER A 159 O ILE A 245 SHEET 4 AA5 5 LYS A 178 TYR A 183 1 O TYR A 180 N VAL A 156 SHEET 5 AA5 5 ALA A 203 PHE A 207 1 O PHE A 206 N VAL A 181 SHEET 1 AA6 3 THR A 209 ALA A 216 0 SHEET 2 AA6 3 ILE A 223 ASN A 230 -1 O TYR A 225 N ILE A 215 SHEET 3 AA6 3 VAL A 236 PRO A 240 -1 O SER A 237 N LEU A 228 SHEET 1 AA7 3 ILE A 266 ILE A 267 0 SHEET 2 AA7 3 TYR A 271 ALA A 273 -1 O TYR A 271 N ILE A 267 SHEET 3 AA7 3 LEU A 292 LYS A 293 1 O LYS A 293 N ILE A 272 SHEET 1 AA8 6 GLU B 81 VAL B 83 0 SHEET 2 AA8 6 THR B 32 ILE B 35 1 N ILE B 34 O VAL B 83 SHEET 3 AA8 6 LEU B 6 ILE B 12 1 N VAL B 11 O LYS B 33 SHEET 4 AA8 6 GLU B 108 VAL B 116 1 O LYS B 112 N PHE B 7 SHEET 5 AA8 6 PHE B 99 THR B 103 -1 N LEU B 101 O HIS B 109 SHEET 6 AA8 6 VAL B 88 ARG B 93 -1 N GLU B 89 O LYS B 102 SHEET 1 AA9 5 GLU B 81 VAL B 83 0 SHEET 2 AA9 5 THR B 32 ILE B 35 1 N ILE B 34 O VAL B 83 SHEET 3 AA9 5 LEU B 6 ILE B 12 1 N VAL B 11 O LYS B 33 SHEET 4 AA9 5 GLU B 108 VAL B 116 1 O LYS B 112 N PHE B 7 SHEET 5 AA9 5 LEU B 285 ALA B 287 1 O TYR B 286 N VAL B 116 SHEET 1 AB1 2 MET B 52 ILE B 53 0 SHEET 2 AB1 2 VAL B 62 THR B 63 -1 O VAL B 62 N ILE B 53 SHEET 1 AB2 2 ILE B 122 PRO B 125 0 SHEET 2 AB2 2 TYR B 250 ASP B 253 -1 O GLU B 251 N LYS B 124 SHEET 1 AB3 5 LEU B 141 ASN B 142 0 SHEET 2 AB3 5 GLU B 243 ILE B 246 1 O VAL B 244 N ASN B 142 SHEET 3 AB3 5 THR B 155 SER B 159 1 N SER B 159 O ILE B 245 SHEET 4 AB3 5 LYS B 178 TYR B 183 1 O TYR B 180 N VAL B 156 SHEET 5 AB3 5 ALA B 203 PHE B 207 1 O PHE B 206 N VAL B 181 SHEET 1 AB4 3 THR B 209 ALA B 216 0 SHEET 2 AB4 3 ILE B 223 ASN B 230 -1 O GLU B 227 N THR B 212 SHEET 3 AB4 3 VAL B 236 PRO B 240 -1 O SER B 237 N LEU B 228 SHEET 1 AB5 3 ILE B 266 ILE B 267 0 SHEET 2 AB5 3 TYR B 271 ALA B 273 -1 O TYR B 271 N ILE B 267 SHEET 3 AB5 3 LEU B 292 LYS B 293 1 O LYS B 293 N ILE B 272 CRYST1 164.612 56.935 94.388 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006075 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010595 0.00000 MTRIX1 1 0.996803 0.077028 -0.021201 -2.69248 1 MTRIX2 1 0.077414 -0.996836 0.018030 56.99105 1 MTRIX3 1 -0.019746 -0.019614 -0.999613 -46.81876 1