HEADER OXIDOREDUCTASE 07-JAN-23 8C5F TITLE E. COLI NFSB-T41Q/N71S/F124T MUTANT BOUND TO ACETATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXYGEN-INSENSITIVE NAD(P)H NITROREDUCTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DIHYDROPTERIDINE REDUCTASE,FMN-DEPENDENT NITROREDUCTASE; COMPND 5 EC: 1.-.-.-,1.5.1.34; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: TRIPLE MUTANT OF E. COLI NFSB SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: DH5A; SOURCE 5 GENE: NFSB, DPRA, NFNB, NFSI, NTR, B0578, JW0567; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11C KEYWDS NITROREDUCTASE MUTANT, COMPLEX, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.A.WHITE,E.I.HYDE,M.A.DAY REVDAT 2 19-JUN-24 8C5F 1 REMARK REVDAT 1 19-APR-23 8C5F 0 JRNL AUTH M.A.DAY,A.J.CHRISTOFFERSON,J.L.R.ANDERSON,S.O.VASS,A.EVANS, JRNL AUTH 2 P.F.SEARLE,S.A.WHITE,E.I.HYDE JRNL TITL STRUCTURE AND DYNAMICS OF THREE ESCHERICHIA COLI NFSB JRNL TITL 2 NITRO-REDUCTASE MUTANTS SELECTED FOR ENHANCED ACTIVITY WITH JRNL TITL 3 THE CANCER PRODRUG CB1954. JRNL REF INT J MOL SCI V. 24 2023 JRNL REFN ESSN 1422-0067 JRNL PMID 36983061 JRNL DOI 10.3390/IJMS24065987 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 54982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.145 REMARK 3 R VALUE (WORKING SET) : 0.144 REMARK 3 FREE R VALUE : 0.171 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2896 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.61 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.65 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3544 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 87.94 REMARK 3 BIN R VALUE (WORKING SET) : 0.2020 REMARK 3 BIN FREE R VALUE SET COUNT : 181 REMARK 3 BIN FREE R VALUE : 0.2240 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3346 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 110 REMARK 3 SOLVENT ATOMS : 479 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 8.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.39000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.78000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.077 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.655 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3650 ; 0.014 ; 0.018 REMARK 3 BOND LENGTHS OTHERS (A): 3467 ; 0.001 ; 0.019 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4945 ; 1.518 ; 1.870 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8014 ; 1.226 ; 2.743 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 457 ; 5.492 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 174 ;31.319 ;23.793 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 617 ;12.325 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;12.389 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 545 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4142 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 772 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 24 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3250 9.3670 -29.1980 REMARK 3 T TENSOR REMARK 3 T11: 0.0988 T22: 0.1071 REMARK 3 T33: 0.0434 T12: -0.0094 REMARK 3 T13: -0.0132 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 1.3902 L22: 2.0735 REMARK 3 L33: 0.4040 L12: -0.0197 REMARK 3 L13: -0.3571 L23: 0.1398 REMARK 3 S TENSOR REMARK 3 S11: 0.0004 S12: 0.2417 S13: -0.0405 REMARK 3 S21: -0.2347 S22: 0.0178 S23: 0.0732 REMARK 3 S31: -0.0012 S32: -0.0709 S33: -0.0182 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 25 A 53 REMARK 3 ORIGIN FOR THE GROUP (A): 12.7910 16.0010 -22.8550 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.0247 REMARK 3 T33: 0.0590 T12: 0.0001 REMARK 3 T13: 0.0085 T23: 0.0179 REMARK 3 L TENSOR REMARK 3 L11: 1.1473 L22: 1.9646 REMARK 3 L33: 1.4838 L12: 0.4985 REMARK 3 L13: 0.2288 L23: 0.0250 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: 0.1179 S13: 0.0130 REMARK 3 S21: -0.0797 S22: 0.0229 S23: -0.1530 REMARK 3 S31: 0.0497 S32: 0.1004 S33: -0.0302 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 54 A 65 REMARK 3 ORIGIN FOR THE GROUP (A): 9.3380 -1.5490 -14.3370 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.0154 REMARK 3 T33: 0.0922 T12: -0.0042 REMARK 3 T13: -0.0351 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 4.7163 L22: 3.1223 REMARK 3 L33: 7.3651 L12: -1.3954 REMARK 3 L13: -2.4170 L23: 2.4969 REMARK 3 S TENSOR REMARK 3 S11: -0.0412 S12: -0.0337 S13: -0.3621 REMARK 3 S21: 0.1858 S22: 0.0269 S23: -0.1075 REMARK 3 S31: 0.5293 S32: 0.0162 S33: 0.0143 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 66 A 77 REMARK 3 ORIGIN FOR THE GROUP (A): -1.1010 -0.4910 -13.5640 REMARK 3 T TENSOR REMARK 3 T11: 0.1180 T22: 0.0896 REMARK 3 T33: 0.1305 T12: -0.0447 REMARK 3 T13: 0.0031 T23: 0.0440 REMARK 3 L TENSOR REMARK 3 L11: 3.3889 L22: 4.8780 REMARK 3 L33: 14.0818 L12: -1.3193 REMARK 3 L13: -3.9343 L23: 3.3062 REMARK 3 S TENSOR REMARK 3 S11: -0.0780 S12: -0.1385 S13: -0.2618 REMARK 3 S21: 0.2915 S22: -0.0941 S23: 0.3642 REMARK 3 S31: 0.5108 S32: -0.5288 S33: 0.1722 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 78 A 110 REMARK 3 ORIGIN FOR THE GROUP (A): 19.2630 22.7740 -16.8180 REMARK 3 T TENSOR REMARK 3 T11: 0.0557 T22: 0.0651 REMARK 3 T33: 0.1186 T12: -0.0201 REMARK 3 T13: -0.0148 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.8404 L22: 1.0419 REMARK 3 L33: 0.9257 L12: 0.3759 REMARK 3 L13: -0.1820 L23: -0.3231 REMARK 3 S TENSOR REMARK 3 S11: 0.0928 S12: -0.0592 S13: 0.0884 REMARK 3 S21: 0.1248 S22: -0.1054 S23: -0.2331 REMARK 3 S31: -0.1374 S32: 0.1872 S33: 0.0126 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 111 A 134 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8330 34.4620 -8.9750 REMARK 3 T TENSOR REMARK 3 T11: 0.2277 T22: 0.1066 REMARK 3 T33: 0.1838 T12: -0.0837 REMARK 3 T13: -0.0190 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 7.0973 L22: 2.5060 REMARK 3 L33: 9.9758 L12: 3.1916 REMARK 3 L13: -7.7836 L23: -4.3236 REMARK 3 S TENSOR REMARK 3 S11: 0.4106 S12: -0.3823 S13: 0.4477 REMARK 3 S21: 0.4671 S22: -0.2159 S23: -0.0208 REMARK 3 S31: -0.6811 S32: 0.4181 S33: -0.1947 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 135 A 192 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8900 13.2320 -14.5670 REMARK 3 T TENSOR REMARK 3 T11: 0.0328 T22: 0.0200 REMARK 3 T33: 0.0262 T12: -0.0099 REMARK 3 T13: -0.0026 T23: 0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.9853 L22: 0.7859 REMARK 3 L33: 1.2376 L12: -0.0003 REMARK 3 L13: 0.3394 L23: -0.1956 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: -0.0413 S13: 0.0238 REMARK 3 S21: 0.0567 S22: -0.0062 S23: -0.0568 REMARK 3 S31: 0.0425 S32: 0.0434 S33: -0.0188 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 193 A 217 REMARK 3 ORIGIN FOR THE GROUP (A): -12.7930 16.4120 -22.3820 REMARK 3 T TENSOR REMARK 3 T11: 0.0451 T22: 0.0901 REMARK 3 T33: 0.0777 T12: 0.0006 REMARK 3 T13: -0.0156 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 1.7063 L22: 3.8861 REMARK 3 L33: 1.0457 L12: -0.9899 REMARK 3 L13: -0.6134 L23: 1.3908 REMARK 3 S TENSOR REMARK 3 S11: 0.0560 S12: 0.1004 S13: 0.0217 REMARK 3 S21: -0.0314 S22: -0.1095 S23: 0.3405 REMARK 3 S31: 0.0197 S32: -0.1686 S33: 0.0535 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 23 REMARK 3 ORIGIN FOR THE GROUP (A): 5.1650 32.9400 -31.3320 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.1199 REMARK 3 T33: 0.2114 T12: 0.0361 REMARK 3 T13: 0.0692 T23: 0.1356 REMARK 3 L TENSOR REMARK 3 L11: 2.6898 L22: 2.7733 REMARK 3 L33: 0.5866 L12: 1.0250 REMARK 3 L13: -0.4810 L23: -0.9930 REMARK 3 S TENSOR REMARK 3 S11: -0.0028 S12: 0.4175 S13: 0.4666 REMARK 3 S21: -0.2660 S22: 0.1672 S23: 0.0366 REMARK 3 S31: -0.0663 S32: -0.1405 S33: -0.1644 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 24 B 91 REMARK 3 ORIGIN FOR THE GROUP (A): -5.1360 34.8240 -18.6850 REMARK 3 T TENSOR REMARK 3 T11: 0.0674 T22: 0.0321 REMARK 3 T33: 0.1754 T12: 0.0287 REMARK 3 T13: 0.0326 T23: 0.0380 REMARK 3 L TENSOR REMARK 3 L11: 1.9244 L22: 2.5608 REMARK 3 L33: 1.0430 L12: 0.7904 REMARK 3 L13: -0.2666 L23: -0.1524 REMARK 3 S TENSOR REMARK 3 S11: 0.1097 S12: 0.0399 S13: 0.5037 REMARK 3 S21: 0.0872 S22: -0.0232 S23: 0.1573 REMARK 3 S31: -0.2256 S32: -0.0788 S33: -0.0865 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 92 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): -19.3520 15.1040 -13.0830 REMARK 3 T TENSOR REMARK 3 T11: 0.0489 T22: 0.1429 REMARK 3 T33: 0.1023 T12: -0.0475 REMARK 3 T13: 0.0362 T23: 0.0252 REMARK 3 L TENSOR REMARK 3 L11: 5.0315 L22: 5.8121 REMARK 3 L33: 3.8234 L12: 1.4751 REMARK 3 L13: 0.8827 L23: 3.1040 REMARK 3 S TENSOR REMARK 3 S11: 0.2200 S12: -0.3205 S13: 0.0927 REMARK 3 S21: 0.3457 S22: -0.2659 S23: 0.3358 REMARK 3 S31: 0.1624 S32: -0.4295 S33: 0.0459 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 134 REMARK 3 ORIGIN FOR THE GROUP (A): -11.7440 11.1460 -4.0010 REMARK 3 T TENSOR REMARK 3 T11: 0.2207 T22: 0.2221 REMARK 3 T33: 0.1626 T12: -0.0359 REMARK 3 T13: 0.0831 T23: 0.0758 REMARK 3 L TENSOR REMARK 3 L11: 9.4652 L22: 2.2834 REMARK 3 L33: 7.6775 L12: 4.0954 REMARK 3 L13: 8.3472 L23: 3.9906 REMARK 3 S TENSOR REMARK 3 S11: 0.2594 S12: -0.6642 S13: -0.2724 REMARK 3 S21: 0.3066 S22: -0.1823 S23: 0.0583 REMARK 3 S31: 0.4371 S32: -0.5352 S33: -0.0771 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 135 B 175 REMARK 3 ORIGIN FOR THE GROUP (A): -0.1160 29.6600 -16.4540 REMARK 3 T TENSOR REMARK 3 T11: 0.0444 T22: 0.0170 REMARK 3 T33: 0.0956 T12: 0.0029 REMARK 3 T13: 0.0122 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 1.5665 L22: 1.1195 REMARK 3 L33: 1.5709 L12: 0.2109 REMARK 3 L13: -0.6646 L23: 0.0496 REMARK 3 S TENSOR REMARK 3 S11: 0.0946 S12: -0.0526 S13: 0.2750 REMARK 3 S21: 0.0561 S22: -0.0046 S23: 0.0383 REMARK 3 S31: -0.1833 S32: -0.0334 S33: -0.0900 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 176 B 201 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4030 36.9800 -17.8580 REMARK 3 T TENSOR REMARK 3 T11: 0.0926 T22: 0.0080 REMARK 3 T33: 0.2049 T12: 0.0060 REMARK 3 T13: 0.0200 T23: 0.0141 REMARK 3 L TENSOR REMARK 3 L11: 3.7063 L22: 1.8260 REMARK 3 L33: 4.0203 L12: 0.6965 REMARK 3 L13: -2.5299 L23: -0.6681 REMARK 3 S TENSOR REMARK 3 S11: 0.2087 S12: 0.0213 S13: 0.5424 REMARK 3 S21: 0.1091 S22: -0.0135 S23: 0.1565 REMARK 3 S31: -0.2669 S32: -0.1103 S33: -0.1952 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 202 B 217 REMARK 3 ORIGIN FOR THE GROUP (A): 18.8670 19.7880 -23.3110 REMARK 3 T TENSOR REMARK 3 T11: 0.0452 T22: 0.0711 REMARK 3 T33: 0.0979 T12: -0.0012 REMARK 3 T13: 0.0089 T23: 0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.7888 L22: 7.5950 REMARK 3 L33: 1.3034 L12: 0.2813 REMARK 3 L13: -0.2333 L23: -2.1586 REMARK 3 S TENSOR REMARK 3 S11: 0.0981 S12: 0.0681 S13: -0.0342 REMARK 3 S21: -0.1179 S22: -0.2307 S23: -0.3367 REMARK 3 S31: 0.0595 S32: 0.1973 S33: 0.1326 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 8C5F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292127818. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57801 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 47.890 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.04600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.41 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.29300 REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 45.1 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10-18% PEG 4,000, 50-200 MM SODIUM REMARK 280 ACETATE BUFFER, 15% ETHYELENE GLYCOL, PH 4.6, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 131.00500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.59650 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.59650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 65.50250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.59650 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.59650 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 196.50750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.59650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.59650 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 65.50250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.59650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.59650 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 196.50750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 131.00500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 647 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 41 19.89 57.87 REMARK 500 LEU B 186 -50.70 -120.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 129 0.28 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 8C5F A 2 217 UNP P38489 NFSB_ECOLI 2 217 DBREF 8C5F B 2 217 UNP P38489 NFSB_ECOLI 2 217 SEQADV 8C5F GLN A 41 UNP P38489 THR 41 ENGINEERED MUTATION SEQADV 8C5F SER A 71 UNP P38489 ASN 71 ENGINEERED MUTATION SEQADV 8C5F THR A 124 UNP P38489 PHE 124 ENGINEERED MUTATION SEQADV 8C5F GLN B 41 UNP P38489 THR 41 ENGINEERED MUTATION SEQADV 8C5F SER B 71 UNP P38489 ASN 71 ENGINEERED MUTATION SEQADV 8C5F THR B 124 UNP P38489 PHE 124 ENGINEERED MUTATION SEQRES 1 A 216 ASP ILE ILE SER VAL ALA LEU LYS ARG HIS SER THR LYS SEQRES 2 A 216 ALA PHE ASP ALA SER LYS LYS LEU THR PRO GLU GLN ALA SEQRES 3 A 216 GLU GLN ILE LYS THR LEU LEU GLN TYR SER PRO SER SER SEQRES 4 A 216 GLN ASN SER GLN PRO TRP HIS PHE ILE VAL ALA SER THR SEQRES 5 A 216 GLU GLU GLY LYS ALA ARG VAL ALA LYS SER ALA ALA GLY SEQRES 6 A 216 ASN TYR VAL PHE SER GLU ARG LYS MET LEU ASP ALA SER SEQRES 7 A 216 HIS VAL VAL VAL PHE CYS ALA LYS THR ALA MET ASP ASP SEQRES 8 A 216 VAL TRP LEU LYS LEU VAL VAL ASP GLN GLU ASP ALA ASP SEQRES 9 A 216 GLY ARG PHE ALA THR PRO GLU ALA LYS ALA ALA ASN ASP SEQRES 10 A 216 LYS GLY ARG LYS PHE THR ALA ASP MET HIS ARG LYS ASP SEQRES 11 A 216 LEU HIS ASP ASP ALA GLU TRP MET ALA LYS GLN VAL TYR SEQRES 12 A 216 LEU ASN VAL GLY ASN PHE LEU LEU GLY VAL ALA ALA LEU SEQRES 13 A 216 GLY LEU ASP ALA VAL PRO ILE GLU GLY PHE ASP ALA ALA SEQRES 14 A 216 ILE LEU ASP ALA GLU PHE GLY LEU LYS GLU LYS GLY TYR SEQRES 15 A 216 THR SER LEU VAL VAL VAL PRO VAL GLY HIS HIS SER VAL SEQRES 16 A 216 GLU ASP PHE ASN ALA THR LEU PRO LYS SER ARG LEU PRO SEQRES 17 A 216 GLN ASN ILE THR LEU THR GLU VAL SEQRES 1 B 216 ASP ILE ILE SER VAL ALA LEU LYS ARG HIS SER THR LYS SEQRES 2 B 216 ALA PHE ASP ALA SER LYS LYS LEU THR PRO GLU GLN ALA SEQRES 3 B 216 GLU GLN ILE LYS THR LEU LEU GLN TYR SER PRO SER SER SEQRES 4 B 216 GLN ASN SER GLN PRO TRP HIS PHE ILE VAL ALA SER THR SEQRES 5 B 216 GLU GLU GLY LYS ALA ARG VAL ALA LYS SER ALA ALA GLY SEQRES 6 B 216 ASN TYR VAL PHE SER GLU ARG LYS MET LEU ASP ALA SER SEQRES 7 B 216 HIS VAL VAL VAL PHE CYS ALA LYS THR ALA MET ASP ASP SEQRES 8 B 216 VAL TRP LEU LYS LEU VAL VAL ASP GLN GLU ASP ALA ASP SEQRES 9 B 216 GLY ARG PHE ALA THR PRO GLU ALA LYS ALA ALA ASN ASP SEQRES 10 B 216 LYS GLY ARG LYS PHE THR ALA ASP MET HIS ARG LYS ASP SEQRES 11 B 216 LEU HIS ASP ASP ALA GLU TRP MET ALA LYS GLN VAL TYR SEQRES 12 B 216 LEU ASN VAL GLY ASN PHE LEU LEU GLY VAL ALA ALA LEU SEQRES 13 B 216 GLY LEU ASP ALA VAL PRO ILE GLU GLY PHE ASP ALA ALA SEQRES 14 B 216 ILE LEU ASP ALA GLU PHE GLY LEU LYS GLU LYS GLY TYR SEQRES 15 B 216 THR SER LEU VAL VAL VAL PRO VAL GLY HIS HIS SER VAL SEQRES 16 B 216 GLU ASP PHE ASN ALA THR LEU PRO LYS SER ARG LEU PRO SEQRES 17 B 216 GLN ASN ILE THR LEU THR GLU VAL HET FMN A 301 31 HET EDO A 302 4 HET ACT A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET ACT A 307 4 HET EDO A 308 4 HET EDO A 309 8 HET FMN B 301 31 HET ACT B 302 4 HET EDO B 303 4 HET EDO B 304 4 HET ACT B 305 4 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 EDO 8(C2 H6 O2) FORMUL 5 ACT 4(C2 H3 O2 1-) FORMUL 17 HOH *479(H2 O) HELIX 1 AA1 ASP A 2 ARG A 10 1 9 HELIX 2 AA2 THR A 23 SER A 37 1 15 HELIX 3 AA3 SER A 39 SER A 43 5 5 HELIX 4 AA4 THR A 53 LYS A 62 1 10 HELIX 5 AA5 SER A 63 ALA A 64 5 2 HELIX 6 AA6 ALA A 65 PHE A 70 5 6 HELIX 7 AA7 SER A 71 ALA A 78 1 8 HELIX 8 AA8 ASP A 91 ASP A 105 1 15 HELIX 9 AA9 THR A 110 ASP A 131 1 22 HELIX 10 AB1 ASP A 134 LEU A 157 1 24 HELIX 11 AB2 ASP A 168 PHE A 176 1 9 HELIX 12 AB3 GLY A 177 GLY A 182 1 6 HELIX 13 AB4 ASP A 198 THR A 202 5 5 HELIX 14 AB5 PRO A 209 THR A 213 1 5 HELIX 15 AB6 ILE B 3 ARG B 10 1 8 HELIX 16 AB7 THR B 23 SER B 37 1 15 HELIX 17 AB8 SER B 39 SER B 43 5 5 HELIX 18 AB9 THR B 53 LYS B 62 1 10 HELIX 19 AC1 SER B 63 ALA B 65 5 3 HELIX 20 AC2 TYR B 68 ALA B 78 1 11 HELIX 21 AC3 ASP B 91 ASP B 105 1 15 HELIX 22 AC4 THR B 110 ASP B 131 1 22 HELIX 23 AC5 ASP B 134 LEU B 157 1 24 HELIX 24 AC6 ASP B 168 PHE B 176 1 9 HELIX 25 AC7 GLY B 177 GLY B 182 1 6 HELIX 26 AC8 ASP B 198 THR B 202 5 5 HELIX 27 AC9 PRO B 209 THR B 213 1 5 SHEET 1 AA1 5 ASP A 160 ALA A 161 0 SHEET 2 AA1 5 TYR A 183 GLY A 192 -1 O GLY A 192 N ASP A 160 SHEET 3 AA1 5 HIS A 80 LYS A 87 -1 N HIS A 80 O VAL A 191 SHEET 4 AA1 5 TRP A 46 ALA A 51 -1 N ALA A 51 O VAL A 81 SHEET 5 AA1 5 LEU B 214 GLU B 216 1 O THR B 215 N VAL A 50 SHEET 1 AA2 5 LEU A 214 VAL A 217 0 SHEET 2 AA2 5 TRP B 46 ALA B 51 1 O VAL B 50 N THR A 215 SHEET 3 AA2 5 HIS B 80 LYS B 87 -1 O VAL B 83 N ILE B 49 SHEET 4 AA2 5 TYR B 183 GLY B 192 -1 O VAL B 191 N HIS B 80 SHEET 5 AA2 5 ASP B 160 ALA B 161 -1 N ASP B 160 O GLY B 192 CRYST1 57.193 57.193 262.010 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017485 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017485 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003817 0.00000