HEADER TRANSPORT PROTEIN 11-JAN-23 8C6G TITLE CRYSTAL STRUCTURE OF ODORANT BINDING PROTEIN 4 FROM ANOPHELES GAMBIAE TITLE 2 (AGAMOBP4) AT PH 6.5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: AGAP010489-PA; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ODORANT BINDING PROTEIN,ODORANT-BINDING PROTEIN AGAMOBP4, COMPND 5 ODORANT-BINDING PROTEIN ANTENNAL 4; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ANOPHELES GAMBIAE; SOURCE 3 ORGANISM_COMMON: AFRICAN MALARIA MOSQUITO; SOURCE 4 ORGANISM_TAXID: 7165; SOURCE 5 GENE: OBP-4, 1275228, AGAMOBP4, OBP4, AGAP_AGAP010489, AGCG48601; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ORIGAMIB(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-22B(+) KEYWDS ODORANT BINDING PROTEIN (OBP), MOSQUITO, OLFACTION, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR K.E.TSITSANOU,C.E.DRAKOU,S.E.ZOGRAPHOS REVDAT 2 07-FEB-24 8C6G 1 REMARK REVDAT 1 05-JUL-23 8C6G 0 JRNL AUTH B.MAM,K.E.TSITSANOU,P.G.V.LIGGRI,F.SAITTA,E.C.V.STAMATI, JRNL AUTH 2 J.MAHITA,G.LEONIS,C.E.DRAKOU,M.PAPADOPOULOS,P.ARNAUD, JRNL AUTH 3 B.OFFMANN,D.FESSAS,R.SOWDHAMINI,S.E.ZOGRAPHOS JRNL TITL INFLUENCE OF PH ON INDOLE-DEPENDENT HETERODIMERIC JRNL TITL 2 INTERACTIONS BETWEEN ANOPHELES GAMBIAE ODORANT-BINDING JRNL TITL 3 PROTEINS OBP1 AND OBP4. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.73 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 14099 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 708 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 969 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 59 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1931 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 76 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.76000 REMARK 3 B22 (A**2) : -2.09000 REMARK 3 B33 (A**2) : 0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.62000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.256 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.188 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.135 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.830 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2035 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2739 ; 1.441 ; 1.986 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 259 ; 5.572 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;35.710 ;25.789 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 403 ;16.208 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ;13.613 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 293 ; 0.095 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1498 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1291 ; 0.434 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2089 ; 0.729 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 744 ; 1.600 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 650 ; 2.352 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 12 REMARK 3 ORIGIN FOR THE GROUP (A): -13.4235 -31.9314 10.4161 REMARK 3 T TENSOR REMARK 3 T11: 0.1579 T22: 0.1292 REMARK 3 T33: 0.1548 T12: -0.0019 REMARK 3 T13: 0.0233 T23: -0.0181 REMARK 3 L TENSOR REMARK 3 L11: 5.4789 L22: 12.4385 REMARK 3 L33: 10.7286 L12: 5.6092 REMARK 3 L13: -7.5831 L23: -6.5177 REMARK 3 S TENSOR REMARK 3 S11: -0.1783 S12: 0.0362 S13: -0.0239 REMARK 3 S21: 0.1237 S22: 0.1117 S23: 0.0621 REMARK 3 S31: 0.3107 S32: -0.0466 S33: 0.0666 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 13 A 17 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0355 -24.9049 2.4467 REMARK 3 T TENSOR REMARK 3 T11: 0.0684 T22: 0.1526 REMARK 3 T33: 0.0673 T12: -0.0130 REMARK 3 T13: 0.0273 T23: -0.0328 REMARK 3 L TENSOR REMARK 3 L11: 14.1498 L22: 22.2554 REMARK 3 L33: 29.0725 L12: -1.7675 REMARK 3 L13: -6.1160 L23: -4.4714 REMARK 3 S TENSOR REMARK 3 S11: -0.3566 S12: -0.3265 S13: -0.7487 REMARK 3 S21: 0.0377 S22: 0.1507 S23: -0.3353 REMARK 3 S31: 0.4228 S32: 0.4732 S33: 0.2059 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 18 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5432 -15.4047 7.6264 REMARK 3 T TENSOR REMARK 3 T11: 0.0642 T22: 0.0613 REMARK 3 T33: 0.0651 T12: -0.0086 REMARK 3 T13: -0.0110 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 2.5874 L22: 0.8267 REMARK 3 L33: 6.2013 L12: 0.2461 REMARK 3 L13: -2.1002 L23: 1.2598 REMARK 3 S TENSOR REMARK 3 S11: -0.0088 S12: -0.0303 S13: 0.0315 REMARK 3 S21: 0.0684 S22: -0.0073 S23: -0.0575 REMARK 3 S31: 0.1801 S32: 0.0474 S33: 0.0161 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 56 REMARK 3 ORIGIN FOR THE GROUP (A): -11.9011 -13.6818 1.8072 REMARK 3 T TENSOR REMARK 3 T11: 0.0539 T22: 0.1123 REMARK 3 T33: 0.0741 T12: 0.0242 REMARK 3 T13: 0.0048 T23: 0.0326 REMARK 3 L TENSOR REMARK 3 L11: 7.5216 L22: 18.5438 REMARK 3 L33: 6.2504 L12: 4.5176 REMARK 3 L13: -0.6419 L23: 1.3159 REMARK 3 S TENSOR REMARK 3 S11: -0.1679 S12: 0.3362 S13: 0.2520 REMARK 3 S21: -0.2997 S22: 0.2919 S23: 0.6726 REMARK 3 S31: -0.1106 S32: -0.1744 S33: -0.1240 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 57 A 77 REMARK 3 ORIGIN FOR THE GROUP (A): -26.1078 -19.3927 4.5386 REMARK 3 T TENSOR REMARK 3 T11: 0.2560 T22: 0.6245 REMARK 3 T33: 0.4450 T12: -0.0232 REMARK 3 T13: -0.0214 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 2.2091 L22: 22.6322 REMARK 3 L33: 11.6040 L12: 1.5729 REMARK 3 L13: 2.4345 L23: -12.0440 REMARK 3 S TENSOR REMARK 3 S11: -0.3230 S12: 0.2535 S13: 0.0120 REMARK 3 S21: -0.7605 S22: 0.5401 S23: 0.1539 REMARK 3 S31: 0.1189 S32: -0.1944 S33: -0.2171 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 78 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -23.7118 -17.9518 15.3273 REMARK 3 T TENSOR REMARK 3 T11: 0.1584 T22: 0.2244 REMARK 3 T33: 0.1949 T12: -0.0245 REMARK 3 T13: 0.0334 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 1.1981 L22: 17.9793 REMARK 3 L33: 1.3879 L12: -1.1643 REMARK 3 L13: -0.7328 L23: -2.6406 REMARK 3 S TENSOR REMARK 3 S11: 0.0189 S12: 0.0995 S13: 0.0641 REMARK 3 S21: 0.0841 S22: 0.0141 S23: 0.3838 REMARK 3 S31: 0.1539 S32: -0.2067 S33: -0.0329 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): -16.1638 -12.4022 11.1627 REMARK 3 T TENSOR REMARK 3 T11: 0.0163 T22: 0.0976 REMARK 3 T33: 0.1269 T12: -0.0090 REMARK 3 T13: 0.0325 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 4.4166 L22: 4.5327 REMARK 3 L33: 6.4595 L12: 0.0885 REMARK 3 L13: -0.2443 L23: -1.5108 REMARK 3 S TENSOR REMARK 3 S11: -0.0327 S12: 0.0541 S13: -0.0048 REMARK 3 S21: 0.0808 S22: 0.0656 S23: 0.0601 REMARK 3 S31: 0.0631 S32: -0.1388 S33: -0.0328 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 6 REMARK 3 ORIGIN FOR THE GROUP (A): -21.5995 -46.9654 4.1771 REMARK 3 T TENSOR REMARK 3 T11: 0.4933 T22: 0.3287 REMARK 3 T33: 0.5311 T12: -0.0862 REMARK 3 T13: 0.0300 T23: -0.1056 REMARK 3 L TENSOR REMARK 3 L11: 30.0926 L22: 8.6550 REMARK 3 L33: 62.2213 L12: 2.2302 REMARK 3 L13: 2.2346 L23: -22.7846 REMARK 3 S TENSOR REMARK 3 S11: -0.3937 S12: 1.3573 S13: -0.7700 REMARK 3 S21: -0.2752 S22: 0.4171 S23: -0.1246 REMARK 3 S31: 0.6173 S32: -0.9328 S33: -0.0234 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 7 B 21 REMARK 3 ORIGIN FOR THE GROUP (A): -22.2801 -34.8731 -3.0212 REMARK 3 T TENSOR REMARK 3 T11: 0.3000 T22: 0.3568 REMARK 3 T33: 0.1893 T12: 0.0280 REMARK 3 T13: -0.0296 T23: -0.1010 REMARK 3 L TENSOR REMARK 3 L11: 4.4570 L22: 21.7133 REMARK 3 L33: 10.9147 L12: 0.4143 REMARK 3 L13: 0.8106 L23: -13.1249 REMARK 3 S TENSOR REMARK 3 S11: -0.0398 S12: -0.6643 S13: 0.0038 REMARK 3 S21: 0.4066 S22: 0.0554 S23: 0.2616 REMARK 3 S31: 0.0655 S32: -0.3113 S33: -0.0156 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 22 B 53 REMARK 3 ORIGIN FOR THE GROUP (A): -21.0548 -35.9001 -15.3847 REMARK 3 T TENSOR REMARK 3 T11: 0.1370 T22: 0.1195 REMARK 3 T33: 0.1034 T12: -0.0071 REMARK 3 T13: -0.0278 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 3.3126 L22: 2.3431 REMARK 3 L33: 3.1085 L12: 0.0335 REMARK 3 L13: -0.0788 L23: 0.6798 REMARK 3 S TENSOR REMARK 3 S11: -0.0505 S12: -0.1103 S13: 0.3062 REMARK 3 S21: -0.0229 S22: 0.0317 S23: 0.0655 REMARK 3 S31: -0.1159 S32: -0.1568 S33: 0.0188 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 54 B 72 REMARK 3 ORIGIN FOR THE GROUP (A): -4.6351 -36.8765 -6.1338 REMARK 3 T TENSOR REMARK 3 T11: 0.2761 T22: 0.3145 REMARK 3 T33: 0.2811 T12: -0.0042 REMARK 3 T13: -0.1567 T23: -0.0625 REMARK 3 L TENSOR REMARK 3 L11: 4.1762 L22: 8.1717 REMARK 3 L33: 6.8620 L12: 0.3674 REMARK 3 L13: -2.4872 L23: -0.7824 REMARK 3 S TENSOR REMARK 3 S11: 0.1777 S12: -0.1385 S13: -0.1999 REMARK 3 S21: 0.0901 S22: 0.0631 S23: -0.6139 REMARK 3 S31: 0.1534 S32: 0.2055 S33: -0.2408 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 73 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): -12.2602 -48.9925 0.6671 REMARK 3 T TENSOR REMARK 3 T11: 0.6509 T22: 0.4808 REMARK 3 T33: 0.2821 T12: 0.1441 REMARK 3 T13: 0.0418 T23: 0.0466 REMARK 3 L TENSOR REMARK 3 L11: 14.2876 L22: 35.6619 REMARK 3 L33: 6.9575 L12: 17.3868 REMARK 3 L13: -2.6579 L23: -1.8837 REMARK 3 S TENSOR REMARK 3 S11: -0.3680 S12: -1.0288 S13: -0.0565 REMARK 3 S21: 1.0103 S22: -0.1789 S23: 0.9353 REMARK 3 S31: -0.3728 S32: -0.2821 S33: 0.5470 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 84 B 102 REMARK 3 ORIGIN FOR THE GROUP (A): -5.5189 -44.5631 -14.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.1686 T22: 0.1776 REMARK 3 T33: 0.2499 T12: 0.0070 REMARK 3 T13: -0.0241 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 1.6126 L22: 10.0569 REMARK 3 L33: 6.5716 L12: -0.7118 REMARK 3 L13: 0.3330 L23: -5.9921 REMARK 3 S TENSOR REMARK 3 S11: 0.0487 S12: -0.0762 S13: -0.0277 REMARK 3 S21: 0.1671 S22: -0.1546 S23: -0.4377 REMARK 3 S31: 0.2895 S32: 0.3532 S33: 0.1059 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 103 B 112 REMARK 3 ORIGIN FOR THE GROUP (A): -11.0176 -37.8673 -17.1947 REMARK 3 T TENSOR REMARK 3 T11: 0.0744 T22: 0.0679 REMARK 3 T33: 0.2234 T12: 0.0034 REMARK 3 T13: -0.0026 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 11.1688 L22: 1.9856 REMARK 3 L33: 5.6319 L12: 3.0428 REMARK 3 L13: -4.2843 L23: -2.4277 REMARK 3 S TENSOR REMARK 3 S11: 0.0109 S12: -0.1168 S13: 0.4500 REMARK 3 S21: -0.0911 S22: -0.0239 S23: -0.2864 REMARK 3 S31: -0.0052 S32: 0.0420 S33: 0.0130 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 113 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9146 -48.1944 -12.3079 REMARK 3 T TENSOR REMARK 3 T11: 0.2768 T22: 0.3451 REMARK 3 T33: 0.2972 T12: -0.0025 REMARK 3 T13: -0.0099 T23: -0.0291 REMARK 3 L TENSOR REMARK 3 L11: 0.4417 L22: 23.9707 REMARK 3 L33: 0.5790 L12: 3.1595 REMARK 3 L13: 0.1870 L23: 2.1531 REMARK 3 S TENSOR REMARK 3 S11: -0.0018 S12: 0.0193 S13: 0.0971 REMARK 3 S21: 0.6122 S22: -0.2310 S23: 1.1445 REMARK 3 S31: 0.2098 S32: -0.2430 S33: 0.2328 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 8C6G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 11-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292127885. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03796 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MULTILAYER MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 48.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3B7A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6 M TRI-SODIUM CITRATE, PH 6.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z+1/2 REMARK 290 4555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 24.20927 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 28.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.13682 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 24.20927 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 28.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 33.13682 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA B 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 116 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 121 -56.82 -129.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 204 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 1 O REMARK 620 2 GLN A 6 OE1 123.2 REMARK 620 3 HOH A 301 O 99.1 124.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 203 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 2 O REMARK 620 2 ASP A 116 OD2 58.4 REMARK 620 3 HOH A 344 O 58.0 8.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 35 OG REMARK 620 2 ALA A 115 O 96.8 REMARK 620 3 THR A 118 O 174.2 77.5 REMARK 620 4 THR A 118 OG1 101.7 86.7 79.5 REMARK 620 5 PRO A 119 O 106.2 155.3 79.2 96.9 REMARK 620 6 HOH A 302 O 99.6 77.4 78.0 154.7 89.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 115 O REMARK 620 2 ASP A 116 O 75.7 REMARK 620 3 THR A 118 O 74.1 90.1 REMARK 620 4 HOH A 302 O 74.3 149.1 88.9 REMARK 620 5 HOH A 340 O 154.1 83.6 90.8 127.3 REMARK 620 6 HOH A 343 O 94.7 88.3 168.7 86.8 100.1 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8C68 RELATED DB: PDB REMARK 900 8C68 CONTAINS THE SAME PROTEIN AT PH 4.6 REMARK 900 RELATED ID: 8C6E RELATED DB: PDB REMARK 900 8C6E CONTAINS THE SAME PROTEIN AT PH 8.5 DBREF 8C6G A 1 125 UNP Q8T6R7 Q8T6R7_ANOGA 26 150 DBREF 8C6G B 1 125 UNP Q8T6R7 Q8T6R7_ANOGA 26 150 SEQRES 1 A 125 ALA MET THR MET LYS GLN LEU THR ASN SER MET ASP MET SEQRES 2 A 125 MET ARG GLN ALA CYS ALA PRO LYS PHE LYS VAL GLU GLU SEQRES 3 A 125 ALA GLU LEU HIS GLY LEU ARG LYS SER ILE PHE PRO ALA SEQRES 4 A 125 ASN PRO ASP LYS GLU LEU LYS CYS TYR ALA MET CYS ILE SEQRES 5 A 125 ALA GLN MET ALA GLY THR MET THR LYS LYS GLY GLU ILE SEQRES 6 A 125 SER PHE SER LYS THR MET ALA GLN ILE GLU ALA MET LEU SEQRES 7 A 125 PRO PRO GLU MET LYS THR MET ALA LYS GLU ALA LEU THR SEQRES 8 A 125 HIS CYS LYS ASP THR GLN THR SER TYR LYS ASP PRO CYS SEQRES 9 A 125 ASP LYS ALA TYR PHE SER ALA LYS CYS ALA ALA ASP PHE SEQRES 10 A 125 THR PRO ASP THR PHE MET PHE PRO SEQRES 1 B 125 ALA MET THR MET LYS GLN LEU THR ASN SER MET ASP MET SEQRES 2 B 125 MET ARG GLN ALA CYS ALA PRO LYS PHE LYS VAL GLU GLU SEQRES 3 B 125 ALA GLU LEU HIS GLY LEU ARG LYS SER ILE PHE PRO ALA SEQRES 4 B 125 ASN PRO ASP LYS GLU LEU LYS CYS TYR ALA MET CYS ILE SEQRES 5 B 125 ALA GLN MET ALA GLY THR MET THR LYS LYS GLY GLU ILE SEQRES 6 B 125 SER PHE SER LYS THR MET ALA GLN ILE GLU ALA MET LEU SEQRES 7 B 125 PRO PRO GLU MET LYS THR MET ALA LYS GLU ALA LEU THR SEQRES 8 B 125 HIS CYS LYS ASP THR GLN THR SER TYR LYS ASP PRO CYS SEQRES 9 B 125 ASP LYS ALA TYR PHE SER ALA LYS CYS ALA ALA ASP PHE SEQRES 10 B 125 THR PRO ASP THR PHE MET PHE PRO HET NA A 201 1 HET NA A 202 1 HET NA A 203 1 HET NA A 204 1 HET GOL B 201 6 HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NA 4(NA 1+) FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *76(H2 O) HELIX 1 AA1 THR A 3 ALA A 19 1 17 HELIX 2 AA2 PRO A 20 PHE A 22 5 3 HELIX 3 AA3 GLU A 25 LYS A 34 1 10 HELIX 4 AA4 ASP A 42 ALA A 56 1 15 HELIX 5 AA5 SER A 66 LEU A 78 1 13 HELIX 6 AA6 PRO A 79 LYS A 94 1 16 HELIX 7 AA7 ASP A 95 TYR A 100 5 6 HELIX 8 AA8 ASP A 102 THR A 118 1 17 HELIX 9 AA9 THR B 3 ALA B 19 1 17 HELIX 10 AB1 PRO B 20 PHE B 22 5 3 HELIX 11 AB2 GLU B 25 LYS B 34 1 10 HELIX 12 AB3 ASP B 42 ALA B 56 1 15 HELIX 13 AB4 SER B 66 LEU B 78 1 13 HELIX 14 AB5 PRO B 79 GLU B 81 5 3 HELIX 15 AB6 MET B 82 LYS B 94 1 13 HELIX 16 AB7 ASP B 95 TYR B 100 5 6 HELIX 17 AB8 ASP B 102 THR B 118 1 17 SSBOND 1 CYS A 18 CYS A 51 1555 1555 2.10 SSBOND 2 CYS A 47 CYS A 104 1555 1555 2.12 SSBOND 3 CYS A 93 CYS A 113 1555 1555 2.12 SSBOND 4 CYS B 18 CYS B 51 1555 1555 2.05 SSBOND 5 CYS B 47 CYS B 104 1555 1555 2.09 SSBOND 6 CYS B 93 CYS B 113 1555 1555 2.06 LINK O ALA A 1 NA NA A 204 1555 1555 2.92 LINK O MET A 2 NA NA A 203 1555 4445 2.85 LINK OE1 GLN A 6 NA NA A 204 1555 1555 2.26 LINK OG SER A 35 NA NA A 201 1555 1555 2.39 LINK O ALA A 115 NA NA A 201 1555 1555 2.44 LINK O ALA A 115 NA NA A 202 1555 1555 2.87 LINK O ASP A 116 NA NA A 202 1555 1555 2.78 LINK OD2 ASP A 116 NA NA A 203 1555 1555 2.28 LINK O THR A 118 NA NA A 201 1555 1555 2.59 LINK OG1 THR A 118 NA NA A 201 1555 1555 2.37 LINK O THR A 118 NA NA A 202 1555 1555 2.32 LINK O PRO A 119 NA NA A 201 1555 1555 2.32 LINK NA NA A 201 O HOH A 302 1555 1555 2.69 LINK NA NA A 202 O HOH A 302 1555 1555 2.43 LINK NA NA A 202 O HOH A 340 1555 1555 2.43 LINK NA NA A 202 O HOH A 343 1555 1555 2.36 LINK NA NA A 203 O HOH A 344 1555 4455 2.79 LINK NA NA A 204 O HOH A 301 1555 4445 2.77 CRYST1 60.355 57.030 67.340 90.00 100.21 90.00 I 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016568 0.000000 0.002983 0.00000 SCALE2 0.000000 0.017535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015089 0.00000