HEADER CARBOHYDRATE 29-JAN-23 8CD0 TITLE HUMAN HEPARAN SULFATE N-DEACETYLASE-N-SULFOTRANSFERASE 1 IN COMPLEX TITLE 2 WITH CALCIUM, 3'-PHOSPHOADENOSINE-5'-PHOSPHOSULFATE, AND NANOBODY TITLE 3 NAB7 (COMPOSITE MAP AND MODEL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL HEPARAN SULFATE N-DEACETYLASE/N- COMPND 3 SULFOTRANSFERASE 1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: GLUCOSAMINYL N-DEACETYLASE/N-SULFOTRANSFERASE 1,NDST-1,N- COMPND 6 HEPARAN SULFATE SULFOTRANSFERASE 1,N-HSST 1,[HEPARAN SULFATE]- COMPND 7 GLUCOSAMINE N-SULFOTRANSFERASE 1,HSNST 1; COMPND 8 EC: 3.5.1.-,2.8.2.8; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: NANOBODY NAB7; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NDST1, HSST, HSST1; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: LAMA GLAMA; SOURCE 10 ORGANISM_TAXID: 9844; SOURCE 11 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 12 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DEACETYLASE, SULFOTRANSFERASE, HEPARAN SULFATE, CARBOHYDRATE, KEYWDS 2 GLYCOSAMINOGLYCAN, NANOBODY EXPDTA ELECTRON MICROSCOPY AUTHOR C.J.MYCROFT-WEST,L.WU REVDAT 2 28-FEB-24 8CD0 1 JRNL REVDAT 1 07-FEB-24 8CD0 0 JRNL AUTH C.J.MYCROFT-WEST,S.ABDELKARIM,H.M.E.DUYVESTEYN,N.S.GANDHI, JRNL AUTH 2 M.A.SKIDMORE,R.J.OWENS,L.WU JRNL TITL STRUCTURAL AND MECHANISTIC CHARACTERIZATION OF BIFUNCTIONAL JRNL TITL 2 HEPARAN SULFATE N-DEACETYLASE-N-SULFOTRANSFERASE 1. JRNL REF NAT COMMUN V. 15 1326 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 38351061 JRNL DOI 10.1038/S41467-024-45419-4 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.420 REMARK 3 NUMBER OF PARTICLES : 614944 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8CD0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JAN-23. REMARK 100 THE DEPOSITION ID IS D_1292128290. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COMPLEX OF HEPARAN SULFATE N REMARK 245 -DEACETYLASE-N-SULFOTRANSFERASE REMARK 245 1 (WITH LIGANDS PAP AND MG2+) REMARK 245 AND NANOBODY NAB7 REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 6.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2600.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 465 ALA A 3 REMARK 465 LEU A 4 REMARK 465 ALA A 5 REMARK 465 CYS A 6 REMARK 465 LEU A 7 REMARK 465 ARG A 8 REMARK 465 ARG A 9 REMARK 465 LEU A 10 REMARK 465 CYS A 11 REMARK 465 ARG A 12 REMARK 465 HIS A 13 REMARK 465 VAL A 14 REMARK 465 SER A 15 REMARK 465 PRO A 16 REMARK 465 GLN A 17 REMARK 465 ALA A 18 REMARK 465 VAL A 19 REMARK 465 LEU A 20 REMARK 465 PHE A 21 REMARK 465 LEU A 22 REMARK 465 LEU A 23 REMARK 465 PHE A 24 REMARK 465 ILE A 25 REMARK 465 PHE A 26 REMARK 465 CYS A 27 REMARK 465 LEU A 28 REMARK 465 PHE A 29 REMARK 465 SER A 30 REMARK 465 VAL A 31 REMARK 465 PHE A 32 REMARK 465 ILE A 33 REMARK 465 SER A 34 REMARK 465 ALA A 35 REMARK 465 TYR A 36 REMARK 465 TYR A 37 REMARK 465 LEU A 38 REMARK 465 TYR A 39 REMARK 465 GLY A 40 REMARK 465 TRP A 41 REMARK 465 LYS A 42 REMARK 465 ARG A 43 REMARK 465 GLY A 44 REMARK 465 LEU A 45 REMARK 465 GLU A 46 REMARK 465 PRO A 47 REMARK 465 SER A 48 REMARK 465 ALA A 49 REMARK 465 ASP A 50 REMARK 465 ALA A 51 REMARK 465 PRO A 52 REMARK 465 GLU A 53 REMARK 465 PRO A 54 REMARK 465 ASP A 55 REMARK 465 CYS A 56 REMARK 465 GLY A 57 REMARK 465 ASP A 58 REMARK 465 PRO A 59 REMARK 465 PRO A 60 REMARK 465 PRO A 61 REMARK 465 VAL A 62 REMARK 465 ALA A 63 REMARK 465 PRO A 64 REMARK 465 SER A 65 REMARK 465 ARG A 66 REMARK 465 LEU A 67 REMARK 465 LEU A 68 REMARK 465 PRO A 69 REMARK 465 LEU A 70 REMARK 465 LYS A 71 REMARK 465 PRO A 72 REMARK 465 VAL A 73 REMARK 465 GLN A 74 REMARK 465 ALA A 75 REMARK 465 ALA A 76 REMARK 465 THR A 77 REMARK 465 PRO A 78 REMARK 465 SER A 79 REMARK 465 ARG A 80 REMARK 465 THR A 81 REMARK 465 ASP A 82 REMARK 465 PRO A 117 REMARK 465 GLY A 118 REMARK 465 LYS A 119 REMARK 465 GLY A 120 REMARK 465 ASP A 121 REMARK 465 MET A 122 REMARK 465 LYS A 171 REMARK 465 ALA A 172 REMARK 465 ASN A 173 REMARK 465 GLU A 174 REMARK 465 ASN A 175 REMARK 465 SER A 176 REMARK 465 LEU A 177 REMARK 465 LEU A 178 REMARK 465 SER A 179 REMARK 465 ALA A 180 REMARK 465 GLN A 181 REMARK 465 LEU A 182 REMARK 465 LYS A 183 REMARK 465 GLY A 184 REMARK 465 PHE A 185 REMARK 465 PRO A 186 REMARK 465 LEU A 187 REMARK 465 PHE A 188 REMARK 465 LEU A 189 REMARK 465 HIS A 190 REMARK 465 SER A 191 REMARK 465 ASN A 192 REMARK 465 LEU A 193 REMARK 465 GLY A 194 REMARK 465 LEU A 195 REMARK 465 LYS A 196 REMARK 465 VAL A 215 REMARK 465 GLU A 216 REMARK 465 LYS A 217 REMARK 465 GLY A 218 REMARK 465 VAL A 219 REMARK 465 LEU A 220 REMARK 465 PRO A 221 REMARK 465 GLY A 222 REMARK 465 GLU A 223 REMARK 465 ASP A 224 REMARK 465 TRP A 225 REMARK 465 THR A 226 REMARK 465 LYS A 242 REMARK 465 THR A 243 REMARK 465 ARG A 244 REMARK 465 SER A 245 REMARK 465 SER A 246 REMARK 465 GLU A 247 REMARK 465 SER A 248 REMARK 465 ILE A 249 REMARK 465 PRO A 250 REMARK 465 HIS A 251 REMARK 465 LEU A 252 REMARK 465 GLY A 253 REMARK 465 ALA A 254 REMARK 465 ASP A 255 REMARK 465 ALA A 256 REMARK 465 GLY A 257 REMARK 465 LEU A 258 REMARK 465 HIS A 259 REMARK 465 ALA A 260 REMARK 465 ALA A 261 REMARK 465 LEU A 262 REMARK 465 HIS A 263 REMARK 465 ALA A 264 REMARK 465 THR A 735 REMARK 465 ALA A 736 REMARK 465 GLY A 737 REMARK 465 SER A 738 REMARK 465 ASP A 739 REMARK 465 ALA A 740 REMARK 465 GLN A 819 REMARK 465 LEU A 820 REMARK 465 LEU A 821 REMARK 465 GLU A 822 REMARK 465 GLY A 823 REMARK 465 GLY A 824 REMARK 465 LYS A 825 REMARK 465 THR A 826 REMARK 465 LYS A 827 REMARK 465 THR A 881 REMARK 465 ARG A 882 REMARK 465 SER C 40 REMARK 465 PRO C 41 REMARK 465 GLY C 42 REMARK 465 LYS C 43 REMARK 465 SER C 126 REMARK 465 SER C 127 REMARK 465 GLU C 128 REMARK 465 PRO C 129 REMARK 465 LYS C 130 REMARK 465 THR C 131 REMARK 465 PRO C 132 REMARK 465 LYS C 133 REMARK 465 PRO C 134 REMARK 465 GLN C 135 REMARK 465 PRO C 136 REMARK 465 ALA C 137 REMARK 465 ALA C 138 REMARK 465 GLY C 139 REMARK 465 PRO C 140 REMARK 465 GLY C 141 REMARK 465 GLY C 142 REMARK 465 GLN C 143 REMARK 465 HIS C 144 REMARK 465 HIS C 145 REMARK 465 HIS C 146 REMARK 465 HIS C 147 REMARK 465 HIS C 148 REMARK 465 HIS C 149 REMARK 465 GLY C 150 REMARK 465 ALA C 151 REMARK 465 GLU C 152 REMARK 465 GLN C 153 REMARK 465 LYS C 154 REMARK 465 LEU C 155 REMARK 465 ILE C 156 REMARK 465 SER C 157 REMARK 465 GLU C 158 REMARK 465 GLU C 159 REMARK 465 ASP C 160 REMARK 465 LEU C 161 REMARK 465 SER C 162 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 362 CB - CG - CD1 ANGL. DEV. = 5.1 DEGREES REMARK 500 LEU A 378 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 CYS A 486 CA - CB - SG ANGL. DEV. = 8.5 DEGREES REMARK 500 ASP A 722 CB - CG - OD1 ANGL. DEV. = 6.6 DEGREES REMARK 500 LEU A 765 CA - CB - CG ANGL. DEV. = 18.1 DEGREES REMARK 500 ASP A 790 CB - CG - OD1 ANGL. DEV. = 9.7 DEGREES REMARK 500 PHE A 847 CB - CG - CD2 ANGL. DEV. = 4.9 DEGREES REMARK 500 PHE A 847 CB - CG - CD1 ANGL. DEV. = -4.3 DEGREES REMARK 500 ASP C 98 CB - CG - OD1 ANGL. DEV. = 10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 146 35.23 -99.19 REMARK 500 LEU A 285 70.80 -100.76 REMARK 500 MET A 390 158.14 64.45 REMARK 500 HIS A 400 40.51 37.34 REMARK 500 MET A 425 -6.59 75.86 REMARK 500 CYS A 486 -10.14 73.05 REMARK 500 ARG A 537 65.56 60.01 REMARK 500 ASN A 555 30.54 -96.29 REMARK 500 SER A 637 -113.02 59.98 REMARK 500 PHE A 640 -127.30 61.70 REMARK 500 GLN A 644 56.83 38.77 REMARK 500 ARG A 853 -53.40 -120.31 REMARK 500 ASP C 115 -62.79 -90.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 902 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 320 OD2 REMARK 620 2 HOH A1003 O 114.1 REMARK 620 N 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1NST RELATED DB: PDB REMARK 900 SAME PROTEIN - C-TERMINAL DOMAIN ONLY REMARK 900 RELATED ID: EMD-16564 RELATED DB: EMDB REMARK 900 SAME PROTEIN WITHOUT NANOBODY REMARK 900 RELATED ID: EMD-16565 RELATED DB: EMDB REMARK 900 HUMAN HEPARAN SULFATE N-DEACETYLASE-N-SULFOTRANSFERASE 1 IN COMPLEX REMARK 900 WITH MAGNESIUM, 3'-PHOSPHOADENOSINE-5'-PHOSPHOSULFATE, AND REMARK 900 INHIBITORY NANOBODY NAB7 - COMPOSITE MAP REMARK 900 RELATED ID: EMD-16626 RELATED DB: EMDB REMARK 900 CONSENSUS MAP REMARK 900 RELATED ID: EMD-16627 RELATED DB: EMDB REMARK 900 FOCUSSED REFINEMENT REMARK 900 RELATED ID: EMD-16629 RELATED DB: EMDB REMARK 900 FOCUSSED REFINEMENT REMARK 900 RELATED ID: 8CD0 RELATED DB: PDB REMARK 900 MODEL FOR COMPOSITE MAP DBREF 8CD0 A 1 882 UNP P52848 NDST1_HUMAN 1 882 DBREF 8CD0 C 1 162 PDB 8CD0 8CD0 1 162 SEQRES 1 A 882 MET PRO ALA LEU ALA CYS LEU ARG ARG LEU CYS ARG HIS SEQRES 2 A 882 VAL SER PRO GLN ALA VAL LEU PHE LEU LEU PHE ILE PHE SEQRES 3 A 882 CYS LEU PHE SER VAL PHE ILE SER ALA TYR TYR LEU TYR SEQRES 4 A 882 GLY TRP LYS ARG GLY LEU GLU PRO SER ALA ASP ALA PRO SEQRES 5 A 882 GLU PRO ASP CYS GLY ASP PRO PRO PRO VAL ALA PRO SER SEQRES 6 A 882 ARG LEU LEU PRO LEU LYS PRO VAL GLN ALA ALA THR PRO SEQRES 7 A 882 SER ARG THR ASP PRO LEU VAL LEU VAL PHE VAL GLU SER SEQRES 8 A 882 LEU TYR SER GLN LEU GLY GLN GLU VAL VAL ALA ILE LEU SEQRES 9 A 882 GLU SER SER ARG PHE LYS TYR ARG THR GLU ILE ALA PRO SEQRES 10 A 882 GLY LYS GLY ASP MET PRO THR LEU THR ASP LYS GLY ARG SEQRES 11 A 882 GLY ARG PHE ALA LEU ILE ILE TYR GLU ASN ILE LEU LYS SEQRES 12 A 882 TYR VAL ASN LEU ASP ALA TRP ASN ARG GLU LEU LEU ASP SEQRES 13 A 882 LYS TYR CYS VAL ALA TYR GLY VAL GLY ILE ILE GLY PHE SEQRES 14 A 882 PHE LYS ALA ASN GLU ASN SER LEU LEU SER ALA GLN LEU SEQRES 15 A 882 LYS GLY PHE PRO LEU PHE LEU HIS SER ASN LEU GLY LEU SEQRES 16 A 882 LYS ASP CYS SER ILE ASN PRO LYS SER PRO LEU LEU TYR SEQRES 17 A 882 VAL THR ARG PRO SER GLU VAL GLU LYS GLY VAL LEU PRO SEQRES 18 A 882 GLY GLU ASP TRP THR VAL PHE GLN SER ASN HIS SER THR SEQRES 19 A 882 TYR GLU PRO VAL LEU LEU ALA LYS THR ARG SER SER GLU SEQRES 20 A 882 SER ILE PRO HIS LEU GLY ALA ASP ALA GLY LEU HIS ALA SEQRES 21 A 882 ALA LEU HIS ALA THR VAL VAL GLN ASP LEU GLY LEU HIS SEQRES 22 A 882 ASP GLY ILE GLN ARG VAL LEU PHE GLY ASN ASN LEU ASN SEQRES 23 A 882 PHE TRP LEU HIS LYS LEU VAL PHE VAL ASP ALA VAL ALA SEQRES 24 A 882 PHE LEU THR GLY LYS ARG LEU SER LEU PRO LEU ASP ARG SEQRES 25 A 882 TYR ILE LEU VAL ASP ILE ASP ASP ILE PHE VAL GLY LYS SEQRES 26 A 882 GLU GLY THR ARG MET LYS VAL GLU ASP VAL LYS ALA LEU SEQRES 27 A 882 PHE ASP THR GLN ASN GLU LEU ARG ALA HIS ILE PRO ASN SEQRES 28 A 882 PHE THR PHE ASN LEU GLY TYR SER GLY LYS PHE PHE HIS SEQRES 29 A 882 THR GLY THR ASN ALA GLU ASP ALA GLY ASP ASP LEU LEU SEQRES 30 A 882 LEU SER TYR VAL LYS GLU PHE TRP TRP PHE PRO HIS MET SEQRES 31 A 882 TRP SER HIS MET GLN PRO HIS LEU PHE HIS ASN GLN SER SEQRES 32 A 882 VAL LEU ALA GLU GLN MET ALA LEU ASN LYS LYS PHE ALA SEQRES 33 A 882 VAL GLU HIS GLY ILE PRO THR ASP MET GLY TYR ALA VAL SEQRES 34 A 882 ALA PRO HIS HIS SER GLY VAL TYR PRO VAL HIS VAL GLN SEQRES 35 A 882 LEU TYR GLU ALA TRP LYS GLN VAL TRP SER ILE ARG VAL SEQRES 36 A 882 THR SER THR GLU GLU TYR PRO HIS LEU LYS PRO ALA ARG SEQRES 37 A 882 TYR ARG ARG GLY PHE ILE HIS ASN GLY ILE MET VAL LEU SEQRES 38 A 882 PRO ARG GLN THR CYS GLY LEU PHE THR HIS THR ILE PHE SEQRES 39 A 882 TYR ASN GLU TYR PRO GLY GLY SER SER GLU LEU ASP LYS SEQRES 40 A 882 ILE ILE ASN GLY GLY GLU LEU PHE LEU THR VAL LEU LEU SEQRES 41 A 882 ASN PRO ILE SER ILE PHE MET THR HIS LEU SER ASN TYR SEQRES 42 A 882 GLY ASN ASP ARG LEU GLY LEU TYR THR PHE LYS HIS LEU SEQRES 43 A 882 VAL ARG PHE LEU HIS SER TRP THR ASN LEU ARG LEU GLN SEQRES 44 A 882 THR LEU PRO PRO VAL GLN LEU ALA GLN LYS TYR PHE GLN SEQRES 45 A 882 ILE PHE SER GLU GLU LYS ASP PRO LEU TRP GLN ASP PRO SEQRES 46 A 882 CYS GLU ASP LYS ARG HIS LYS ASP ILE TRP SER LYS GLU SEQRES 47 A 882 LYS THR CYS ASP ARG PHE PRO LYS LEU LEU ILE ILE GLY SEQRES 48 A 882 PRO GLN LYS THR GLY THR THR ALA LEU TYR LEU PHE LEU SEQRES 49 A 882 GLY MET HIS PRO ASP LEU SER SER ASN TYR PRO SER SER SEQRES 50 A 882 GLU THR PHE GLU GLU ILE GLN PHE PHE ASN GLY HIS ASN SEQRES 51 A 882 TYR HIS LYS GLY ILE ASP TRP TYR MET GLU PHE PHE PRO SEQRES 52 A 882 ILE PRO SER ASN THR THR SER ASP PHE TYR PHE GLU LYS SEQRES 53 A 882 SER ALA ASN TYR PHE ASP SER GLU VAL ALA PRO ARG ARG SEQRES 54 A 882 ALA ALA ALA LEU LEU PRO LYS ALA LYS VAL LEU THR ILE SEQRES 55 A 882 LEU ILE ASN PRO ALA ASP ARG ALA TYR SER TRP TYR GLN SEQRES 56 A 882 HIS GLN ARG ALA HIS ASP ASP PRO VAL ALA LEU LYS TYR SEQRES 57 A 882 THR PHE HIS GLU VAL ILE THR ALA GLY SER ASP ALA SER SEQRES 58 A 882 SER LYS LEU ARG ALA LEU GLN ASN ARG CYS LEU VAL PRO SEQRES 59 A 882 GLY TRP TYR ALA THR HIS ILE GLU ARG TRP LEU SER ALA SEQRES 60 A 882 TYR HIS ALA ASN GLN ILE LEU VAL LEU ASP GLY LYS LEU SEQRES 61 A 882 LEU ARG THR GLU PRO ALA LYS VAL MET ASP MET VAL GLN SEQRES 62 A 882 LYS PHE LEU GLY VAL THR ASN THR ILE ASP TYR HIS LYS SEQRES 63 A 882 THR LEU ALA PHE ASP PRO LYS LYS GLY PHE TRP CYS GLN SEQRES 64 A 882 LEU LEU GLU GLY GLY LYS THR LYS CYS LEU GLY LYS SER SEQRES 65 A 882 LYS GLY ARG LYS TYR PRO GLU MET ASP LEU ASP SER ARG SEQRES 66 A 882 ALA PHE LEU LYS ASP TYR TYR ARG ASP HIS ASN ILE GLU SEQRES 67 A 882 LEU SER LYS LEU LEU TYR LYS MET GLY GLN THR LEU PRO SEQRES 68 A 882 THR TRP LEU ARG GLU ASP LEU GLN ASN THR ARG SEQRES 1 C 162 GLN VAL GLN LEU VAL GLU SER GLY GLY GLY SER VAL GLN SEQRES 2 C 162 ALA GLY GLY SER LEU ARG LEU SER CYS ALA ALA SER GLY SEQRES 3 C 162 PHE ASN VAL ASP ASP TYR ALA ILE GLY TRP PHE ARG GLN SEQRES 4 C 162 SER PRO GLY LYS GLU ARG GLU GLY VAL SER CYS ILE GLY SEQRES 5 C 162 GLY ASP GLY THR THR TYR TYR GLU ASN SER VAL LYS GLY SEQRES 6 C 162 ARG PHE THR VAL SER SER ASP LYS ARG ASP ASN THR VAL SEQRES 7 C 162 TYR LEU GLN MET ASN ASN LEU ARG PRO GLU ASP THR ALA SEQRES 8 C 162 ILE TYR PHE CYS ALA ALA ASP ARG SER LYS TYR CYS VAL SEQRES 9 C 162 GLY LYS TYR PHE SER THR PRO SER GLN TYR ASP PHE TRP SEQRES 10 C 162 GLY ARG GLY THR HIS VAL THR VAL SER SER GLU PRO LYS SEQRES 11 C 162 THR PRO LYS PRO GLN PRO ALA ALA GLY PRO GLY GLY GLN SEQRES 12 C 162 HIS HIS HIS HIS HIS HIS GLY ALA GLU GLN LYS LEU ILE SEQRES 13 C 162 SER GLU GLU ASP LEU SER HET A3P A 901 27 HET CA A 902 1 HETNAM A3P ADENOSINE-3'-5'-DIPHOSPHATE HETNAM CA CALCIUM ION FORMUL 3 A3P C10 H15 N5 O10 P2 FORMUL 4 CA CA 2+ FORMUL 5 HOH *4(H2 O) HELIX 1 AA1 SER A 94 SER A 107 1 14 HELIX 2 AA2 ILE A 141 ASN A 146 1 6 HELIX 3 AA3 ASP A 148 GLY A 163 1 16 HELIX 4 AA4 PHE A 287 THR A 302 1 16 HELIX 5 AA5 LYS A 331 ILE A 349 1 19 HELIX 6 AA6 THR A 367 ASP A 374 1 8 HELIX 7 AA7 ASP A 375 SER A 379 5 5 HELIX 8 AA8 ASN A 401 GLY A 420 1 20 HELIX 9 AA9 HIS A 440 TRP A 451 1 12 HELIX 10 AB1 PRO A 466 ARG A 470 5 5 HELIX 11 AB2 GLY A 501 ASN A 510 1 10 HELIX 12 AB3 GLY A 512 ASN A 521 1 10 HELIX 13 AB4 HIS A 529 TYR A 533 5 5 HELIX 14 AB5 ARG A 537 THR A 554 1 18 HELIX 15 AB6 PRO A 562 PHE A 574 1 13 HELIX 16 AB7 SER A 575 ASP A 579 5 5 HELIX 17 AB8 ASP A 588 TRP A 595 1 8 HELIX 18 AB9 GLY A 616 MET A 626 1 11 HELIX 19 AC1 SER A 636 PHE A 640 5 5 HELIX 20 AC2 GLY A 648 LYS A 653 5 6 HELIX 21 AC3 GLY A 654 MET A 659 1 6 HELIX 22 AC4 ALA A 678 PHE A 681 5 4 HELIX 23 AC5 VAL A 685 LEU A 694 1 10 HELIX 24 AC6 ASN A 705 HIS A 720 1 16 HELIX 25 AC7 ASP A 722 TYR A 728 1 7 HELIX 26 AC8 THR A 729 ILE A 734 1 6 HELIX 27 AC9 SER A 742 VAL A 753 1 12 HELIX 28 AD1 TRP A 756 TYR A 768 1 13 HELIX 29 AD2 LYS A 779 GLU A 784 1 6 HELIX 30 AD3 GLU A 784 LEU A 796 1 13 HELIX 31 AD4 ASP A 803 LEU A 808 1 6 HELIX 32 AD5 ASP A 841 TYR A 852 1 12 HELIX 33 AD6 ARG A 853 MET A 866 1 14 HELIX 34 AD7 PRO A 871 ASN A 880 1 10 HELIX 35 AD8 ARG C 86 THR C 90 5 5 HELIX 36 AD9 THR C 110 TYR C 114 5 5 SHEET 1 AA1 7 TYR A 111 GLU A 114 0 SHEET 2 AA1 7 VAL A 85 PHE A 88 1 N VAL A 87 O ARG A 112 SHEET 3 AA1 7 LEU A 135 TYR A 138 1 O LEU A 135 N LEU A 86 SHEET 4 AA1 7 GLY A 165 ILE A 167 1 O ILE A 167 N TYR A 138 SHEET 5 AA1 7 ARG A 278 LEU A 280 1 O VAL A 279 N ILE A 166 SHEET 6 AA1 7 VAL A 267 ASP A 269 -1 N ASP A 269 O ARG A 278 SHEET 7 AA1 7 TYR A 235 GLU A 236 -1 N GLU A 236 O GLN A 268 SHEET 1 AA2 2 SER A 199 ILE A 200 0 SHEET 2 AA2 2 LEU A 239 LEU A 240 -1 O LEU A 240 N SER A 199 SHEET 1 AA3 6 TRP A 385 PRO A 388 0 SHEET 2 AA3 6 ASN A 355 TYR A 358 1 N LEU A 356 O PHE A 387 SHEET 3 AA3 6 ASP A 311 ILE A 321 1 N ILE A 318 O GLY A 357 SHEET 4 AA3 6 ILE A 523 THR A 528 1 O THR A 528 N ASP A 319 SHEET 5 AA3 6 ILE A 478 GLN A 484 1 N GLN A 484 O ILE A 525 SHEET 6 AA3 6 PHE A 473 HIS A 475 -1 N PHE A 473 O VAL A 480 SHEET 1 AA4 5 VAL A 455 THR A 458 0 SHEET 2 AA4 5 ILE A 478 GLN A 484 1 O ARG A 483 N THR A 458 SHEET 3 AA4 5 ILE A 523 THR A 528 1 O ILE A 525 N GLN A 484 SHEET 4 AA4 5 ASP A 311 ILE A 321 1 N ASP A 319 O THR A 528 SHEET 5 AA4 5 ARG A 557 GLN A 559 1 O GLN A 559 N ARG A 312 SHEET 1 AA5 5 LEU A 630 SER A 632 0 SHEET 2 AA5 5 PHE A 672 SER A 677 1 O PHE A 672 N SER A 631 SHEET 3 AA5 5 LEU A 607 ILE A 610 1 N ILE A 609 O SER A 677 SHEET 4 AA5 5 LYS A 698 ILE A 702 1 O LYS A 698 N LEU A 608 SHEET 5 AA5 5 ILE A 773 LEU A 776 1 O LEU A 774 N THR A 701 SHEET 1 AA6 2 ALA A 809 ASP A 811 0 SHEET 2 AA6 2 PHE A 816 CYS A 818 -1 O CYS A 818 N ALA A 809 SHEET 1 AA7 4 GLN C 3 GLU C 6 0 SHEET 2 AA7 4 LEU C 18 SER C 25 -1 O ALA C 23 N VAL C 5 SHEET 3 AA7 4 THR C 77 MET C 82 -1 O MET C 82 N LEU C 18 SHEET 4 AA7 4 THR C 68 ASP C 72 -1 N SER C 70 O TYR C 79 SHEET 1 AA8 5 THR C 57 TYR C 59 0 SHEET 2 AA8 5 GLU C 46 ILE C 51 -1 N CYS C 50 O TYR C 58 SHEET 3 AA8 5 GLY C 35 ARG C 38 -1 N ARG C 38 O GLU C 46 SHEET 4 AA8 5 ALA C 91 ALA C 96 -1 O PHE C 94 N PHE C 37 SHEET 5 AA8 5 THR C 121 VAL C 123 -1 O THR C 121 N TYR C 93 SSBOND 1 CYS A 586 CYS A 601 1555 1555 2.03 SSBOND 2 CYS A 818 CYS A 828 1555 1555 2.03 SSBOND 3 CYS C 22 CYS C 95 1555 1555 2.03 SSBOND 4 CYS C 50 CYS C 103 1555 1555 2.03 LINK OD2 ASP A 320 CA CA A 902 1555 1555 2.16 LINK CA CA A 902 O HOH A1003 1555 1555 2.12 CISPEP 1 TYR A 437 PRO A 438 0 0.12 CISPEP 2 TYR A 461 PRO A 462 0 -16.85 CISPEP 3 LYS A 465 PRO A 466 0 -1.47 CISPEP 4 GLY A 611 PRO A 612 0 6.97 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000