HEADER MOTOR PROTEIN 31-JAN-23 8CDQ TITLE PLASMODIUM FALCIPARUM MYOSIN A FULL-LENGTH, POST-RIGOR STATE COMPLEXED TITLE 2 TO THE INHIBITOR KNX-002 AND MG.ATP-GAMMA-S COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN-A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PFMYOA; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MYOSIN A TAIL DOMAIN INTERACTING PROTEIN; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: MYOSIN ESSENTIAL LIGHT CHAIN ELC; COMPND 12 CHAIN: C; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 4 ORGANISM_TAXID: 36329; SOURCE 5 STRAIN: ISOLATE 3D7; SOURCE 6 GENE: MYOA, PF13_0233, PF3D7_1342600; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 11 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 12 ORGANISM_TAXID: 36329; SOURCE 13 STRAIN: ISOLATE 3D7; SOURCE 14 GENE: PF3D7_1246400; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 19 ORGANISM_COMMON: MALARIA PARASITE P. FALCIPARUM; SOURCE 20 ORGANISM_TAXID: 36329; SOURCE 21 STRAIN: ISOLATE 3D7; SOURCE 22 GENE: PF3D7_1017500; SOURCE 23 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 24 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MALARIA, PLASMODIUM FALCIPARUM, MYOSIN A, KNX-002, ANTIMALARIAL KEYWDS 2 TREATMENT, MOLECULAR MOTORS, MOTOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.MOUSSAOUI,J.P.ROBBLEE,J.ROBERT-PAGANIN,D.AUGUIN,F.FISHER, AUTHOR 2 P.M.FAGNANT,J.E.MACFARLANE,J.SCHALETZKY,E.WEHRI,C.MUELLER-DIECKMANN, AUTHOR 3 J.BAUM,K.M.TRYBUS,A.HOUDUSSE REVDAT 2 15-NOV-23 8CDQ 1 SOURCE REVDAT 1 21-JUN-23 8CDQ 0 JRNL AUTH D.MOUSSAOUI,J.P.ROBBLEE,J.ROBERT-PAGANIN,D.AUGUIN,F.FISHER, JRNL AUTH 2 P.M.FAGNANT,J.E.MACFARLANE,J.SCHALETZKY,E.WEHRI, JRNL AUTH 3 C.MUELLER-DIECKMANN,J.BAUM,K.M.TRYBUS,A.HOUDUSSE JRNL TITL MECHANISM OF SMALL MOLECULE INHIBITION OF PLASMODIUM JRNL TITL 2 FALCIPARUM MYOSIN A INFORMS ANTIMALARIAL DRUG DESIGN. JRNL REF NAT COMMUN V. 14 3463 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37308472 JRNL DOI 10.1038/S41467-023-38976-7 REMARK 2 REMARK 2 RESOLUTION. 2.21 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.21 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 95.08 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 64.0 REMARK 3 NUMBER OF REFLECTIONS : 57094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2834 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 95.0800 - 6.0000 0.99 4481 260 0.1756 0.2093 REMARK 3 2 6.0000 - 4.7600 1.00 4338 218 0.1623 0.1979 REMARK 3 3 4.7600 - 4.1600 1.00 4308 212 0.1319 0.1811 REMARK 3 4 4.1600 - 3.7800 1.00 4278 220 0.1486 0.2020 REMARK 3 5 3.7800 - 3.5100 1.00 4236 233 0.1751 0.2199 REMARK 3 6 3.5100 - 3.3000 0.98 4144 240 0.1959 0.2576 REMARK 3 7 3.3000 - 3.1400 0.92 3938 187 0.2149 0.2857 REMARK 3 8 3.1400 - 3.0000 0.85 3574 203 0.2341 0.2820 REMARK 3 9 3.0000 - 2.8900 0.79 3326 185 0.2458 0.2880 REMARK 3 10 2.8800 - 2.7900 0.74 3149 140 0.2654 0.2819 REMARK 3 11 2.7900 - 2.7000 0.67 2804 145 0.2691 0.3336 REMARK 3 12 2.7000 - 2.6200 0.62 2604 137 0.2719 0.3232 REMARK 3 13 2.6200 - 2.5500 0.55 2338 100 0.2761 0.3097 REMARK 3 14 2.5500 - 2.4900 0.49 2059 116 0.2729 0.3386 REMARK 3 15 2.4900 - 2.4300 0.43 1805 91 0.2777 0.3691 REMARK 3 16 2.4300 - 2.3800 0.33 1373 64 0.2941 0.3887 REMARK 3 17 2.3800 - 2.3300 0.19 805 43 0.2702 0.2668 REMARK 3 18 2.3300 - 2.2900 0.11 439 27 0.2641 0.3062 REMARK 3 19 2.2900 - 2.2500 0.05 222 12 0.3151 0.4990 REMARK 3 20 2.2500 - 2.2100 0.01 39 1 0.3058 0.3737 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.380 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8839 REMARK 3 ANGLE : 0.980 11915 REMARK 3 CHIRALITY : 0.053 1336 REMARK 3 PLANARITY : 0.007 1513 REMARK 3 DIHEDRAL : 8.168 1192 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 0.2041 -48.1242 2.7952 REMARK 3 T TENSOR REMARK 3 T11: 0.1388 T22: 0.2397 REMARK 3 T33: 0.1777 T12: 0.0318 REMARK 3 T13: 0.0096 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.3676 L22: 1.2600 REMARK 3 L33: 0.3929 L12: 0.1337 REMARK 3 L13: 0.0203 L23: 0.0096 REMARK 3 S TENSOR REMARK 3 S11: -0.0203 S12: -0.0005 S13: 0.0444 REMARK 3 S21: 0.0002 S22: 0.0462 S23: -0.0714 REMARK 3 S31: -0.0071 S32: 0.0256 S33: -0.0253 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CDQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-FEB-23. REMARK 100 THE DEPOSITION ID IS D_1292128266. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-DEC-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9687 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 S 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57115 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 95.080 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.9 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.19900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.21 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 59.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.47600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6YCY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE, 0.1M SODIUM REMARK 280 HEPES PH 7,5, 4% PEG400, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 57.20800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.19950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 85.45950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.19950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 57.20800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 85.45950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 48220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -78.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 373 REMARK 465 GLY A 374 REMARK 465 LEU A 375 REMARK 465 MET B -45 REMARK 465 LYS B -44 REMARK 465 GLN B -43 REMARK 465 GLU B -42 REMARK 465 CYS B -41 REMARK 465 ASN B -40 REMARK 465 VAL B -39 REMARK 465 CYS B -38 REMARK 465 TYR B -37 REMARK 465 PHE B -36 REMARK 465 ASN B -35 REMARK 465 LEU B -34 REMARK 465 PRO B -33 REMARK 465 ASP B -32 REMARK 465 PRO B -31 REMARK 465 GLU B -30 REMARK 465 SER B -29 REMARK 465 THR B -28 REMARK 465 LEU B -27 REMARK 465 GLY B -26 REMARK 465 PRO B -25 REMARK 465 TYR B -24 REMARK 465 ASP B -23 REMARK 465 ASN B -22 REMARK 465 GLU B -21 REMARK 465 LEU B -20 REMARK 465 ASN B -19 REMARK 465 TYR B -18 REMARK 465 PHE B -17 REMARK 465 THR B -16 REMARK 465 TRP B -15 REMARK 465 GLY B -14 REMARK 465 PRO B -13 REMARK 465 GLY B -12 REMARK 465 PHE B -11 REMARK 465 GLU B -10 REMARK 465 TYR B -9 REMARK 465 GLU B -8 REMARK 465 PRO B -7 REMARK 465 GLU B -6 REMARK 465 PRO B -5 REMARK 465 GLN B -4 REMARK 465 ARG B -3 REMARK 465 LYS B -2 REMARK 465 PRO B -1 REMARK 465 LEU B 0 REMARK 465 SER B 1 REMARK 465 ILE B 2 REMARK 465 GLU B 3 REMARK 465 GLU B 4 REMARK 465 SER B 5 REMARK 465 PHE B 6 REMARK 465 GLU B 7 REMARK 465 ASN B 8 REMARK 465 SER B 9 REMARK 465 GLU B 10 REMARK 465 GLU B 11 REMARK 465 SER B 12 REMARK 465 GLU B 13 REMARK 465 GLU B 14 REMARK 465 SER B 15 REMARK 465 VAL B 16 REMARK 465 ALA B 17 REMARK 465 ASP B 18 REMARK 465 ILE B 19 REMARK 465 GLN B 20 REMARK 465 GLN B 21 REMARK 465 LEU B 22 REMARK 465 GLU B 23 REMARK 465 GLU B 24 REMARK 465 LYS B 25 REMARK 465 VAL B 26 REMARK 465 ASP B 27 REMARK 465 MET C 1 REMARK 465 GLU C 78 REMARK 465 GLN C 79 REMARK 465 ASN C 80 REMARK 465 THR C 81 REMARK 465 ASN C 82 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1223 O HOH C 325 1.99 REMARK 500 NH2 ARG A 449 O HOH A 1001 2.06 REMARK 500 O HOH A 1010 O HOH A 1167 2.09 REMARK 500 O SER C 127 OG1 THR C 131 2.09 REMARK 500 O HOH A 1155 O HOH B 211 2.10 REMARK 500 O HOH A 1175 O HOH A 1207 2.15 REMARK 500 O ILE A 514 O HOH A 1002 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 22 75.87 -106.10 REMARK 500 SER A 41 148.78 -170.79 REMARK 500 THR A 85 1.19 -63.13 REMARK 500 ASN A 138 109.69 -57.67 REMARK 500 SER A 213 52.51 -156.29 REMARK 500 ASP A 217 39.36 -87.84 REMARK 500 LYS A 308 -163.39 -105.39 REMARK 500 ASP A 377 60.44 67.78 REMARK 500 SER A 480 -164.05 -128.95 REMARK 500 ASN A 568 0.58 -65.94 REMARK 500 ALA A 576 71.44 54.40 REMARK 500 LYS A 579 -1.36 73.92 REMARK 500 GLU A 626 130.17 -38.72 REMARK 500 GLU A 631 73.72 -103.49 REMARK 500 LYS A 634 -142.83 58.65 REMARK 500 HIS B 90 71.43 52.15 REMARK 500 GLN C 68 74.72 -153.33 REMARK 500 PHE C 70 45.42 -106.91 REMARK 500 ASN C 114 75.25 -120.00 REMARK 500 GLU C 116 3.37 -69.21 REMARK 500 SER C 133 33.44 -88.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 216 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B 217 DISTANCE = 6.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 910 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 198 OG1 REMARK 620 2 SER A 246 OG 90.6 REMARK 620 3 AGS A 909 O2G 154.8 81.0 REMARK 620 4 AGS A 909 O1B 108.2 140.0 67.0 REMARK 620 5 HOH A1005 O 108.5 91.2 95.5 114.3 REMARK 620 6 HOH A1011 O 95.0 69.8 59.7 73.5 150.1 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8A12 RELATED DB: PDB REMARK 900 SAME COMPLEX WITHOUT KNX-002 DBREF 8CDQ A 1 818 UNP Q8IDR3 MYOA_PLAF7 1 818 DBREF 8CDQ B -45 158 UNP Q8I4W8 Q8I4W8_PLAF7 1 204 DBREF 8CDQ C 1 134 UNP Q8IJM4 Q8IJM4_PLAF7 1 134 SEQRES 1 A 818 MET ALA VAL THR ASN GLU GLU ILE LYS THR ALA SER LYS SEQRES 2 A 818 ILE VAL ARG ARG VAL SEP ASN VAL GLU ALA PHE ASP LYS SEQRES 3 A 818 SER GLY SER VAL PHE LYS GLY TYR GLN ILE TRP THR ASP SEQRES 4 A 818 ILE SER PRO THR ILE GLU ASN ASP PRO ASN ILE MET PHE SEQRES 5 A 818 VAL LYS CYS VAL VAL GLN GLN GLY SER LYS LYS GLU LYS SEQRES 6 A 818 LEU THR VAL VAL GLN ILE ASP PRO PRO GLY THR GLY THR SEQRES 7 A 818 PRO TYR ASP ILE ASP PRO THR HIS ALA TRP ASN CYS ASN SEQRES 8 A 818 SER GLN VAL ASP PRO MET SER PHE GLY ASP ILE GLY LEU SEQRES 9 A 818 LEU ASN HIS THR ASN ILE PRO CYS VAL LEU ASP PHE LEU SEQRES 10 A 818 LYS HIS ARG TYR LEU LYS ASN GLN ILE TYR THR THR ALA SEQRES 11 A 818 VAL PRO LEU ILE VAL ALA ILE ASN PRO TYR LYS ASP LEU SEQRES 12 A 818 GLY ASN THR THR ASN GLU TRP ILE ARG ARG TYR ARG ASP SEQRES 13 A 818 THR ALA ASP HIS THR LYS LEU PRO PRO HIS VAL PHE THR SEQRES 14 A 818 CYS ALA ARG GLU ALA LEU SER ASN LEU HIS GLY VAL ASN SEQRES 15 A 818 LYS SER GLN THR ILE ILE VAL SER GLY GLU SER GLY ALA SEQRES 16 A 818 GLY LYS THR GLU ALA THR LYS GLN ILE MET ARG TYR PHE SEQRES 17 A 818 ALA SER SER LYS SER GLY ASN MET ASP LEU ARG ILE GLN SEQRES 18 A 818 THR ALA ILE MET ALA ALA ASN PRO VAL LEU GLU ALA PHE SEQRES 19 A 818 GLY ASN ALA LYS THR ILE ARG ASN ASN ASN SER SER ARG SEQRES 20 A 818 PHE GLY ARG PHE MET GLN LEU VAL ILE SER HIS GLU GLY SEQRES 21 A 818 GLY ILE ARG TYR GLY SER VAL VAL ALA PHE LEU LEU GLU SEQRES 22 A 818 LYS SER ARG ILE ILE THR GLN ASP ASP ASN GLU ARG SER SEQRES 23 A 818 TYR HIS ILE PHE TYR GLN PHE LEU LYS GLY ALA ASN SER SEQRES 24 A 818 THR MET LYS SER LYS PHE GLY LEU LYS GLY VAL THR GLU SEQRES 25 A 818 TYR LYS LEU LEU ASN PRO ASN SER THR GLU VAL SER GLY SEQRES 26 A 818 VAL ASP ASP VAL LYS ASP PHE GLU GLU VAL ILE GLU SER SEQRES 27 A 818 LEU LYS ASN MET GLU LEU SER GLU SER ASP ILE GLU VAL SEQRES 28 A 818 ILE PHE SER ILE VAL ALA GLY ILE LEU THR LEU GLY ASN SEQRES 29 A 818 VAL ARG LEU ILE GLU LYS GLN GLU ALA GLY LEU SER ASP SEQRES 30 A 818 ALA ALA ALA ILE MET ASP GLU ASP MET GLY VAL PHE ASN SEQRES 31 A 818 LYS ALA CYS GLU LEU MET TYR LEU ASP PRO GLU LEU ILE SEQRES 32 A 818 LYS ARG GLU ILE LEU ILE LYS VAL THR VAL ALA GLY GLY SEQRES 33 A 818 THR LYS ILE GLU GLY ARG TRP ASN LYS ASN ASP ALA GLU SEQRES 34 A 818 VAL LEU LYS SER SER LEU CYS LYS ALA MET TYR GLU LYS SEQRES 35 A 818 LEU PHE LEU TRP ILE ILE ARG HIS LEU ASN SER ARG ILE SEQRES 36 A 818 GLU PRO GLU GLY GLY PHE LYS THR PHE MET GLY MET LEU SEQRES 37 A 818 ASP ILE PHE GLY PHE GLU VAL PHE LYS ASN ASN SER LEU SEQRES 38 A 818 GLU GLN LEU PHE ILE ASN ILE THR ASN GLU MET LEU GLN SEQRES 39 A 818 LYS ASN PHE VAL ASP ILE VAL PHE GLU ARG GLU SER LYS SEQRES 40 A 818 LEU TYR LYS ASP GLU GLY ILE SER THR ALA GLU LEU LYS SEQRES 41 A 818 TYR THR SER ASN LYS GLU VAL ILE ASN VAL LEU CYS GLU SEQRES 42 A 818 LYS GLY LYS SER VAL LEU SER TYR LEU GLU ASP GLN CYS SEQRES 43 A 818 LEU ALA PRO GLY GLY THR ASP GLU LYS PHE VAL SER SER SEQRES 44 A 818 CYS ALA THR ASN LEU LYS GLU ASN ASN LYS PHE THR PRO SEQRES 45 A 818 ALA LYS VAL ALA SER ASN LYS ASN PHE ILE ILE GLN HIS SEQRES 46 A 818 THR ILE GLY PRO ILE GLN TYR CYS ALA GLU SER PHE LEU SEQRES 47 A 818 LEU LYS ASN LYS ASP VAL LEU ARG GLY ASP LEU VAL GLU SEQRES 48 A 818 VAL ILE LYS ASP SER PRO ASN PRO ILE VAL GLN GLN LEU SEQRES 49 A 818 PHE GLU GLY GLN VAL ILE GLU LYS GLY LYS ILE ALA LYS SEQRES 50 A 818 GLY SER LEU ILE GLY SER GLN PHE LEU ASN GLN LEU THR SEQRES 51 A 818 SER LEU MET ASN LEU ILE ASN SER THR GLU PRO HIS PHE SEQRES 52 A 818 ILE ARG CYS ILE LYS PRO ASN GLU ASN LYS LYS PRO LEU SEQRES 53 A 818 GLU TRP CYS GLU PRO LYS ILE LEU ILE GLN LEU HIS ALA SEQRES 54 A 818 LEU SER ILE LEU GLU ALA LEU VAL LEU ARG GLN LEU GLY SEQRES 55 A 818 TYR SER TYR ARG ARG THR PHE GLU GLU PHE LEU TYR GLN SEQRES 56 A 818 TYR LYS PHE VAL ASP ILE ALA ALA ALA GLU ASP SER SER SEQRES 57 A 818 VAL GLU ASN GLN ASN LYS CYS VAL ASN ILE LEU LYS LEU SEQRES 58 A 818 SER GLY LEU SER GLU SER MET TYR LYS ILE GLY LYS SER SEQRES 59 A 818 MET VAL PHE LEU LYS GLN GLU GLY ALA LYS ILE LEU THR SEQRES 60 A 818 LYS ILE GLN ARG GLU LYS LEU VAL GLU TRP GLU ASN CYS SEQRES 61 A 818 VAL SER VAL ILE GLU ALA ALA ILE LEU LYS HIS LYS TYR SEQRES 62 A 818 LYS GLN LYS VAL ASN LYS ASN ILE PRO SER LEU LEU ARG SEQRES 63 A 818 VAL GLN ALA HIS ILE ARG LYS LYS MET VAL ALA GLN SEQRES 1 B 204 MET LYS GLN GLU CYS ASN VAL CYS TYR PHE ASN LEU PRO SEQRES 2 B 204 ASP PRO GLU SER THR LEU GLY PRO TYR ASP ASN GLU LEU SEQRES 3 B 204 ASN TYR PHE THR TRP GLY PRO GLY PHE GLU TYR GLU PRO SEQRES 4 B 204 GLU PRO GLN ARG LYS PRO LEU SER ILE GLU GLU SER PHE SEQRES 5 B 204 GLU ASN SER GLU GLU SER GLU GLU SER VAL ALA ASP ILE SEQRES 6 B 204 GLN GLN LEU GLU GLU LYS VAL ASP GLU SER ASP VAL ARG SEQRES 7 B 204 ILE TYR PHE ASN GLU LYS SER SER GLY GLY LYS ILE SER SEQRES 8 B 204 ILE ASP ASN ALA SER TYR ASN ALA ARG LYS LEU GLY LEU SEQRES 9 B 204 ALA PRO SER SER ILE ASP GLU LYS LYS ILE LYS GLU LEU SEQRES 10 B 204 TYR GLY ASP ASN LEU THR TYR GLU GLN TYR LEU GLU TYR SEQRES 11 B 204 LEU SER ILE CYS VAL HIS ASP LYS ASP ASN VAL GLU GLU SEQRES 12 B 204 LEU ILE LYS MET PHE ALA HIS PHE ASP ASN ASN CYS THR SEQRES 13 B 204 GLY TYR LEU THR LYS SER GLN MET LYS ASN ILE LEU THR SEQRES 14 B 204 THR TRP GLY ASP ALA LEU THR ASP GLN GLU ALA ILE ASP SEQRES 15 B 204 ALA LEU ASN ALA PHE SER SER GLU ASP ASN ILE ASP TYR SEQRES 16 B 204 LYS LEU PHE CYS GLU ASP ILE LEU GLN SEQRES 1 C 134 MET ALA SER ASP MET GLU GLU LYS PHE ARG GLU ALA PHE SEQRES 2 C 134 ILE LEU PHE SER SER CYS SER ASP HIS ILE GLU MET TYR SEQRES 3 C 134 LYS PHE PHE GLU LEU MET ASN SER PHE GLY ILE ILE LEU SEQRES 4 C 134 THR ASN ASP GLU LYS ALA ALA LEU PRO ASN ASP ILE ASN SEQRES 5 C 134 MET ASP TYR TRP LEU ASN PHE ALA LYS LYS HIS TYR ASN SEQRES 6 C 134 TYR GLU GLN PRO PHE LYS HIS ILE ASN ASN VAL ASN GLU SEQRES 7 C 134 GLN ASN THR ASN VAL GLN ILE LYS ILE ASP ASN PHE LEU SEQRES 8 C 134 GLY ILE MET LYS ALA LEU ASP THR ARG LEU THR GLU SER SEQRES 9 C 134 ASP LEU ASN ILE LEU LEU GLN ILE THR ASN PRO GLU ASN SEQRES 10 C 134 LYS SER THR LEU ASN LEU LYS THR VAL SER GLN LYS LEU SEQRES 11 C 134 THR GLU SER ILE MODRES 8CDQ SEP A 19 SER MODIFIED RESIDUE HET SEP A 19 10 HET GOL A 901 6 HET GOL A 902 6 HET GOL A 903 6 HET SO4 A 904 5 HET GOL A 905 6 HET EDO A 906 4 HET PG4 A 907 13 HET EDO A 908 4 HET AGS A 909 31 HET MG A 910 1 HET KQ0 A 911 23 HET SO4 C 201 5 HETNAM SEP PHOSPHOSERINE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM KQ0 1-(4-METHOXYPHENYL)-~{N}-[(3-THIOPHEN-2-YL-1~{H}- HETNAM 2 KQ0 PYRAZOL-4-YL)METHYL]CYCLOPROPAN-1-AMINE HETSYN SEP PHOSPHONOSERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN EDO ETHYLENE GLYCOL HETSYN AGS ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE); HETSYN 2 AGS ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'- HETSYN 3 AGS DIPHOSPHATE MONOTHIOPHOSPHATE FORMUL 1 SEP C3 H8 N O6 P FORMUL 4 GOL 4(C3 H8 O3) FORMUL 7 SO4 2(O4 S 2-) FORMUL 9 EDO 2(C2 H6 O2) FORMUL 10 PG4 C8 H18 O5 FORMUL 12 AGS C10 H16 N5 O12 P3 S FORMUL 13 MG MG 2+ FORMUL 14 KQ0 C18 H19 N3 O S FORMUL 16 HOH *305(H2 O) HELIX 1 AA1 THR A 4 VAL A 15 1 12 HELIX 2 AA2 SER A 41 ASP A 47 1 7 HELIX 3 AA3 ASP A 83 THR A 85 5 3 HELIX 4 AA4 ASP A 95 PHE A 99 5 5 HELIX 5 AA5 ASP A 101 LEU A 105 5 5 HELIX 6 AA6 ASN A 109 LEU A 122 1 14 HELIX 7 AA7 THR A 147 THR A 157 1 11 HELIX 8 AA8 ASP A 159 LEU A 163 5 5 HELIX 9 AA9 HIS A 166 ASN A 182 1 17 HELIX 10 AB1 GLY A 196 ALA A 209 1 14 HELIX 11 AB2 ASP A 217 GLY A 235 1 19 HELIX 12 AB3 GLU A 273 ILE A 278 5 6 HELIX 13 AB4 TYR A 287 ALA A 297 1 11 HELIX 14 AB5 ASN A 298 GLY A 306 1 9 HELIX 15 AB6 GLY A 309 TYR A 313 5 5 HELIX 16 AB7 ASP A 327 MET A 342 1 16 HELIX 17 AB8 SER A 345 GLY A 363 1 19 HELIX 18 AB9 ASP A 385 MET A 396 1 12 HELIX 19 AC1 ASP A 399 LEU A 408 1 10 HELIX 20 AC2 ASN A 424 GLU A 456 1 33 HELIX 21 AC3 SER A 480 GLY A 513 1 34 HELIX 22 AC4 ASN A 524 GLU A 533 1 10 HELIX 23 AC5 SER A 537 ALA A 548 1 12 HELIX 24 AC6 THR A 552 LEU A 564 1 13 HELIX 25 AC7 SER A 596 LYS A 602 1 7 HELIX 26 AC8 GLY A 607 ASP A 615 1 9 HELIX 27 AC9 ASN A 618 PHE A 625 1 8 HELIX 28 AD1 ALA A 636 SER A 639 5 4 HELIX 29 AD2 LEU A 640 SER A 658 1 19 HELIX 30 AD3 CYS A 679 LEU A 690 1 12 HELIX 31 AD4 SER A 691 LEU A 701 1 11 HELIX 32 AD5 PHE A 709 LYS A 717 1 9 HELIX 33 AD6 ASP A 720 GLU A 725 1 6 HELIX 34 AD7 GLU A 730 LEU A 741 1 12 HELIX 35 AD8 SER A 745 SER A 747 5 3 HELIX 36 AD9 LYS A 759 LYS A 773 1 15 HELIX 37 AE1 LEU A 774 GLU A 776 5 3 HELIX 38 AE2 TRP A 777 ASN A 800 1 24 HELIX 39 AE3 ASN A 800 ALA A 817 1 18 HELIX 40 AE4 SER B 29 SER B 39 1 11 HELIX 41 AE5 ILE B 46 LEU B 56 1 11 HELIX 42 AE6 SER B 61 GLY B 73 1 13 HELIX 43 AE7 THR B 77 CYS B 88 1 12 HELIX 44 AE8 ASN B 94 ILE B 99 1 6 HELIX 45 AE9 ILE B 99 PHE B 105 1 7 HELIX 46 AF1 LYS B 115 TRP B 125 1 11 HELIX 47 AF2 THR B 130 ALA B 140 1 11 HELIX 48 AF3 TYR B 149 LEU B 157 1 9 HELIX 49 AF4 MET C 5 SER C 18 1 14 HELIX 50 AF5 GLU C 24 PHE C 35 1 12 HELIX 51 AF6 THR C 40 ALA C 46 1 7 HELIX 52 AF7 MET C 53 TYR C 64 1 12 HELIX 53 AF8 ILE C 87 LEU C 97 1 11 HELIX 54 AF9 THR C 102 ASN C 114 1 13 HELIX 55 AG1 LEU C 123 SER C 133 1 11 SHEET 1 AA1 5 TYR A 80 ILE A 82 0 SHEET 2 AA1 5 LEU A 66 ASP A 72 -1 N VAL A 68 O TYR A 80 SHEET 3 AA1 5 VAL A 53 VAL A 57 -1 N LYS A 54 O ASP A 72 SHEET 4 AA1 5 GLN A 35 THR A 38 -1 N THR A 38 O VAL A 53 SHEET 5 AA1 5 ALA A 87 TRP A 88 -1 O TRP A 88 N TRP A 37 SHEET 1 AA2 7 TYR A 127 ALA A 130 0 SHEET 2 AA2 7 LEU A 133 ILE A 137 -1 O VAL A 135 N THR A 128 SHEET 3 AA2 7 GLU A 660 ILE A 667 1 O ARG A 665 N ILE A 134 SHEET 4 AA2 7 GLN A 185 GLY A 191 1 N ILE A 188 O HIS A 662 SHEET 5 AA2 7 MET A 465 PHE A 471 1 O GLY A 466 N GLN A 185 SHEET 6 AA2 7 GLY A 249 ILE A 256 -1 N LEU A 254 O MET A 465 SHEET 7 AA2 7 ILE A 262 PHE A 270 -1 O ARG A 263 N VAL A 255 SHEET 1 AA3 2 ASN A 236 ALA A 237 0 SHEET 2 AA3 2 SER A 245 SER A 246 -1 O SER A 245 N ALA A 237 SHEET 1 AA4 2 LEU A 367 LYS A 370 0 SHEET 2 AA4 2 ALA A 378 ILE A 381 -1 O ALA A 378 N LYS A 370 SHEET 1 AA5 2 ILE A 409 ALA A 414 0 SHEET 2 AA5 2 THR A 417 ARG A 422 -1 O GLY A 421 N LYS A 410 SHEET 1 AA6 3 PHE A 570 PRO A 572 0 SHEET 2 AA6 3 ASN A 580 HIS A 585 -1 O ILE A 582 N THR A 571 SHEET 3 AA6 3 GLY A 588 CYS A 593 -1 O TYR A 592 N PHE A 581 SHEET 1 AA7 3 TYR A 705 THR A 708 0 SHEET 2 AA7 3 MET A 755 LEU A 758 -1 O LEU A 758 N TYR A 705 SHEET 3 AA7 3 TYR A 749 ILE A 751 -1 N LYS A 750 O PHE A 757 SHEET 1 AA8 2 ILE B 44 SER B 45 0 SHEET 2 AA8 2 ASN B 75 LEU B 76 -1 O LEU B 76 N ILE B 44 SHEET 1 AA9 2 TYR B 112 THR B 114 0 SHEET 2 AA9 2 ASN B 146 ASP B 148 -1 O ILE B 147 N LEU B 113 SHEET 1 AB1 2 HIS C 22 ILE C 23 0 SHEET 2 AB1 2 ILE C 51 ASN C 52 -1 O ILE C 51 N ILE C 23 SHEET 1 AB2 2 GLN C 84 LYS C 86 0 SHEET 2 AB2 2 THR C 120 ASN C 122 -1 O LEU C 121 N ILE C 85 LINK C VAL A 18 N SEP A 19 1555 1555 1.33 LINK C SEP A 19 N ASN A 20 1555 1555 1.33 LINK OG1 THR A 198 MG MG A 910 1555 1555 2.08 LINK OG SER A 246 MG MG A 910 1555 1555 2.53 LINK O2G AGS A 909 MG MG A 910 1555 1555 2.58 LINK O1B AGS A 909 MG MG A 910 1555 1555 2.26 LINK MG MG A 910 O HOH A1005 1555 1555 2.37 LINK MG MG A 910 O HOH A1011 1555 1555 2.29 CISPEP 1 ASP A 72 PRO A 73 0 -0.22 CISPEP 2 VAL A 131 PRO A 132 0 2.31 CRYST1 114.416 170.919 90.399 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008740 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005851 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011062 0.00000