HEADER HYDROLASE 27-FEB-23 8COD TITLE CRYSTAL STRUCTURE OF S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE FROM MUS TITLE 2 MUSCULUS IN COMPLEX WITH INOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSYLHOMOCYSTEINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADOHCYASE,CUBP,LIVER COPPER-BINDING PROTEIN,S-ADENOSYL-L- COMPND 5 HOMOCYSTEINE HYDROLASE; COMPND 6 EC: 3.13.2.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: AHCY; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COMPLEX, S-ADENOSYL-L-HOMOCYSTEINE (SAH), S-ADENOSYL-L-METHIONINE KEYWDS 2 (SAM), HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.SALEEM-BATCHA,D.POPADIC,L.H.KOEPPL,J.N.ANDEXER REVDAT 1 06-MAR-24 8COD 0 JRNL AUTH R.SALEEM-BATCHA,D.POPADIC,L.H.KOEPPL,J.N.ANDEXER JRNL TITL CRYSTAL STRUCTURE OF S-ADENOSYL-L-HOMOCYSTEINE HYDROLASE JRNL TITL 2 FROM MUS MUSCULUS IN COMPLEX WITH INOSINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 88.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 29460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.149 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1594 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.48 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2162 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2300 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3170 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6642 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 128 REMARK 3 SOLVENT ATOMS : 322 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.57000 REMARK 3 B22 (A**2) : -2.36000 REMARK 3 B33 (A**2) : 1.79000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.941 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.269 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.204 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.546 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6912 ; 0.007 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9378 ; 1.568 ; 1.633 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 856 ; 7.110 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 318 ;35.039 ;23.208 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1198 ;19.353 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;15.701 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 922 ; 0.111 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5144 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3430 ; 2.706 ; 3.719 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4284 ; 3.863 ; 5.569 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3482 ; 4.213 ; 4.012 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 10759 ; 7.264 ;51.687 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 8COD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292128900. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-NOV-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31056 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 88.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.18000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.97000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 180 MM SODIUM FORMATE, PH 6.9, AND 22% REMARK 280 PEG 3350, PH 8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 49.11000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.26300 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 86.70400 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 49.11000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.26300 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 86.70400 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 49.11000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.26300 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 86.70400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 49.11000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.26300 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 86.70400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 29500 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 51260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -185.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 ASP A 3 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 ASP B 3 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 7 174.43 179.81 REMARK 500 ASP A 11 107.78 -165.76 REMARK 500 ASN A 27 -9.96 -59.67 REMARK 500 HIS A 55 117.37 -25.70 REMARK 500 LYS A 186 -69.54 -102.62 REMARK 500 ASP A 280 44.43 70.52 REMARK 500 LEU A 344 112.48 -39.19 REMARK 500 ALA A 350 -136.54 -139.69 REMARK 500 TYR B 7 167.08 178.79 REMARK 500 ASP B 11 111.27 -173.05 REMARK 500 HIS B 55 113.74 -30.15 REMARK 500 ALA B 101 130.57 -177.73 REMARK 500 LYS B 186 -77.41 -101.76 REMARK 500 PHE B 189 -61.40 -131.36 REMARK 500 TYR B 221 35.74 -142.87 REMARK 500 ASP B 280 55.15 71.01 REMARK 500 LEU B 344 117.14 -32.22 REMARK 500 ALA B 350 -135.66 -133.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 603 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 59 OE1 REMARK 620 2 GLU A 59 OE2 42.7 REMARK 620 3 MET A 351 O 83.3 124.5 REMARK 620 4 HIS A 353 O 83.1 99.4 81.9 REMARK 620 5 HOH A 809 O 67.3 65.1 85.7 149.0 REMARK 620 6 HOH A 813 O 161.9 151.5 84.0 82.4 124.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 603 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 59 OE1 REMARK 620 2 MET B 351 O 82.5 REMARK 620 3 HIS B 353 O 74.0 79.6 REMARK 620 4 HOH B 733 O 147.1 86.8 73.4 REMARK 620 5 HOH B 799 O 68.7 83.5 140.7 140.8 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 7R37 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 7R38 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 7R39 RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION REMARK 900 RELATED ID: 7R3A RELATED DB: PDB REMARK 900 PDB ENTRIES FOR THE SAME CITATION DBREF 8COD A 1 432 UNP P50247 SAHH_MOUSE 1 432 DBREF 8COD B 1 432 UNP P50247 SAHH_MOUSE 1 432 SEQADV 8COD MET A -19 UNP P50247 INITIATING METHIONINE SEQADV 8COD GLY A -18 UNP P50247 EXPRESSION TAG SEQADV 8COD SER A -17 UNP P50247 EXPRESSION TAG SEQADV 8COD SER A -16 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A -15 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A -14 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A -13 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A -12 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A -11 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A -10 UNP P50247 EXPRESSION TAG SEQADV 8COD SER A -9 UNP P50247 EXPRESSION TAG SEQADV 8COD SER A -8 UNP P50247 EXPRESSION TAG SEQADV 8COD GLY A -7 UNP P50247 EXPRESSION TAG SEQADV 8COD LEU A -6 UNP P50247 EXPRESSION TAG SEQADV 8COD VAL A -5 UNP P50247 EXPRESSION TAG SEQADV 8COD PRO A -4 UNP P50247 EXPRESSION TAG SEQADV 8COD ARG A -3 UNP P50247 EXPRESSION TAG SEQADV 8COD GLY A -2 UNP P50247 EXPRESSION TAG SEQADV 8COD SER A -1 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS A 0 UNP P50247 EXPRESSION TAG SEQADV 8COD MET B -19 UNP P50247 INITIATING METHIONINE SEQADV 8COD GLY B -18 UNP P50247 EXPRESSION TAG SEQADV 8COD SER B -17 UNP P50247 EXPRESSION TAG SEQADV 8COD SER B -16 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B -15 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B -14 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B -13 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B -12 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B -11 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B -10 UNP P50247 EXPRESSION TAG SEQADV 8COD SER B -9 UNP P50247 EXPRESSION TAG SEQADV 8COD SER B -8 UNP P50247 EXPRESSION TAG SEQADV 8COD GLY B -7 UNP P50247 EXPRESSION TAG SEQADV 8COD LEU B -6 UNP P50247 EXPRESSION TAG SEQADV 8COD VAL B -5 UNP P50247 EXPRESSION TAG SEQADV 8COD PRO B -4 UNP P50247 EXPRESSION TAG SEQADV 8COD ARG B -3 UNP P50247 EXPRESSION TAG SEQADV 8COD GLY B -2 UNP P50247 EXPRESSION TAG SEQADV 8COD SER B -1 UNP P50247 EXPRESSION TAG SEQADV 8COD HIS B 0 UNP P50247 EXPRESSION TAG SEQRES 1 A 452 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 452 LEU VAL PRO ARG GLY SER HIS MET SER ASP LYS LEU PRO SEQRES 3 A 452 TYR LYS VAL ALA ASP ILE GLY LEU ALA ALA TRP GLY ARG SEQRES 4 A 452 LYS ALA LEU ASP ILE ALA GLU ASN GLU MET PRO GLY LEU SEQRES 5 A 452 MET ARG MET ARG GLU MET TYR SER ALA SER LYS PRO LEU SEQRES 6 A 452 LYS GLY ALA ARG ILE ALA GLY CYS LEU HIS MET THR VAL SEQRES 7 A 452 GLU THR ALA VAL LEU ILE GLU THR LEU VAL ALA LEU GLY SEQRES 8 A 452 ALA GLU VAL ARG TRP SER SER CYS ASN ILE PHE SER THR SEQRES 9 A 452 GLN ASP HIS ALA ALA ALA ALA ILE ALA LYS ALA GLY ILE SEQRES 10 A 452 PRO VAL PHE ALA TRP LYS GLY GLU THR ASP GLU GLU TYR SEQRES 11 A 452 LEU TRP CYS ILE GLU GLN THR LEU HIS PHE LYS ASP GLY SEQRES 12 A 452 PRO LEU ASN MET ILE LEU ASP ASP GLY GLY ASP LEU THR SEQRES 13 A 452 ASN LEU ILE HIS THR LYS TYR PRO GLN LEU LEU SER GLY SEQRES 14 A 452 ILE ARG GLY ILE SER GLU GLU THR THR THR GLY VAL HIS SEQRES 15 A 452 ASN LEU TYR LYS MET MET SER ASN GLY ILE LEU LYS VAL SEQRES 16 A 452 PRO ALA ILE ASN VAL ASN ASP SER VAL THR LYS SER LYS SEQRES 17 A 452 PHE ASP ASN LEU TYR GLY CYS ARG GLU SER LEU ILE ASP SEQRES 18 A 452 GLY ILE LYS ARG ALA THR ASP VAL MET ILE ALA GLY LYS SEQRES 19 A 452 VAL ALA VAL VAL ALA GLY TYR GLY ASP VAL GLY LYS GLY SEQRES 20 A 452 CYS ALA GLN ALA LEU ARG GLY PHE GLY ALA ARG VAL ILE SEQRES 21 A 452 ILE THR GLU ILE ASP PRO ILE ASN ALA LEU GLN ALA ALA SEQRES 22 A 452 MET GLU GLY TYR GLU VAL THR THR MET ASP GLU ALA CYS SEQRES 23 A 452 LYS GLU GLY ASN ILE PHE VAL THR THR THR GLY CYS VAL SEQRES 24 A 452 ASP ILE ILE LEU GLY ARG HIS PHE GLU GLN MET LYS ASP SEQRES 25 A 452 ASP ALA ILE VAL CYS ASN ILE GLY HIS PHE ASP VAL GLU SEQRES 26 A 452 ILE ASP VAL LYS TRP LEU ASN GLU ASN ALA VAL GLU LYS SEQRES 27 A 452 VAL ASN ILE LYS PRO GLN VAL ASP ARG TYR TRP LEU LYS SEQRES 28 A 452 ASN GLY ARG ARG ILE ILE LEU LEU ALA GLU GLY ARG LEU SEQRES 29 A 452 VAL ASN LEU GLY CYS ALA MET GLY HIS PRO SER PHE VAL SEQRES 30 A 452 MET SER ASN SER PHE THR ASN GLN VAL MET ALA GLN ILE SEQRES 31 A 452 GLU LEU TRP THR HIS PRO ASP LYS TYR PRO VAL GLY VAL SEQRES 32 A 452 HIS PHE LEU PRO LYS LYS LEU ASP GLU ALA VAL ALA GLU SEQRES 33 A 452 ALA HIS LEU GLY LYS LEU ASN VAL LYS LEU THR LYS LEU SEQRES 34 A 452 THR GLU LYS GLN ALA GLN TYR LEU GLY MET PRO ILE ASN SEQRES 35 A 452 GLY PRO PHE LYS PRO ASP HIS TYR ARG TYR SEQRES 1 B 452 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 452 LEU VAL PRO ARG GLY SER HIS MET SER ASP LYS LEU PRO SEQRES 3 B 452 TYR LYS VAL ALA ASP ILE GLY LEU ALA ALA TRP GLY ARG SEQRES 4 B 452 LYS ALA LEU ASP ILE ALA GLU ASN GLU MET PRO GLY LEU SEQRES 5 B 452 MET ARG MET ARG GLU MET TYR SER ALA SER LYS PRO LEU SEQRES 6 B 452 LYS GLY ALA ARG ILE ALA GLY CYS LEU HIS MET THR VAL SEQRES 7 B 452 GLU THR ALA VAL LEU ILE GLU THR LEU VAL ALA LEU GLY SEQRES 8 B 452 ALA GLU VAL ARG TRP SER SER CYS ASN ILE PHE SER THR SEQRES 9 B 452 GLN ASP HIS ALA ALA ALA ALA ILE ALA LYS ALA GLY ILE SEQRES 10 B 452 PRO VAL PHE ALA TRP LYS GLY GLU THR ASP GLU GLU TYR SEQRES 11 B 452 LEU TRP CYS ILE GLU GLN THR LEU HIS PHE LYS ASP GLY SEQRES 12 B 452 PRO LEU ASN MET ILE LEU ASP ASP GLY GLY ASP LEU THR SEQRES 13 B 452 ASN LEU ILE HIS THR LYS TYR PRO GLN LEU LEU SER GLY SEQRES 14 B 452 ILE ARG GLY ILE SER GLU GLU THR THR THR GLY VAL HIS SEQRES 15 B 452 ASN LEU TYR LYS MET MET SER ASN GLY ILE LEU LYS VAL SEQRES 16 B 452 PRO ALA ILE ASN VAL ASN ASP SER VAL THR LYS SER LYS SEQRES 17 B 452 PHE ASP ASN LEU TYR GLY CYS ARG GLU SER LEU ILE ASP SEQRES 18 B 452 GLY ILE LYS ARG ALA THR ASP VAL MET ILE ALA GLY LYS SEQRES 19 B 452 VAL ALA VAL VAL ALA GLY TYR GLY ASP VAL GLY LYS GLY SEQRES 20 B 452 CYS ALA GLN ALA LEU ARG GLY PHE GLY ALA ARG VAL ILE SEQRES 21 B 452 ILE THR GLU ILE ASP PRO ILE ASN ALA LEU GLN ALA ALA SEQRES 22 B 452 MET GLU GLY TYR GLU VAL THR THR MET ASP GLU ALA CYS SEQRES 23 B 452 LYS GLU GLY ASN ILE PHE VAL THR THR THR GLY CYS VAL SEQRES 24 B 452 ASP ILE ILE LEU GLY ARG HIS PHE GLU GLN MET LYS ASP SEQRES 25 B 452 ASP ALA ILE VAL CYS ASN ILE GLY HIS PHE ASP VAL GLU SEQRES 26 B 452 ILE ASP VAL LYS TRP LEU ASN GLU ASN ALA VAL GLU LYS SEQRES 27 B 452 VAL ASN ILE LYS PRO GLN VAL ASP ARG TYR TRP LEU LYS SEQRES 28 B 452 ASN GLY ARG ARG ILE ILE LEU LEU ALA GLU GLY ARG LEU SEQRES 29 B 452 VAL ASN LEU GLY CYS ALA MET GLY HIS PRO SER PHE VAL SEQRES 30 B 452 MET SER ASN SER PHE THR ASN GLN VAL MET ALA GLN ILE SEQRES 31 B 452 GLU LEU TRP THR HIS PRO ASP LYS TYR PRO VAL GLY VAL SEQRES 32 B 452 HIS PHE LEU PRO LYS LYS LEU ASP GLU ALA VAL ALA GLU SEQRES 33 B 452 ALA HIS LEU GLY LYS LEU ASN VAL LYS LEU THR LYS LEU SEQRES 34 B 452 THR GLU LYS GLN ALA GLN TYR LEU GLY MET PRO ILE ASN SEQRES 35 B 452 GLY PRO PHE LYS PRO ASP HIS TYR ARG TYR HET NAD A 601 44 HET NOS A 602 19 HET NA A 603 1 HET NAD B 601 44 HET NOS B 602 19 HET NA B 603 1 HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM NOS INOSINE HETNAM NA SODIUM ION FORMUL 3 NAD 2(C21 H27 N7 O14 P2) FORMUL 4 NOS 2(C10 H12 N4 O5) FORMUL 5 NA 2(NA 1+) FORMUL 9 HOH *322(H2 O) HELIX 1 AA1 ASP A 11 GLY A 13 5 3 HELIX 2 AA2 LEU A 14 ASN A 27 1 14 HELIX 3 AA3 MET A 29 SER A 40 1 12 HELIX 4 AA4 THR A 57 LEU A 70 1 14 HELIX 5 AA5 GLN A 85 ALA A 95 1 11 HELIX 6 AA6 THR A 106 GLN A 116 1 11 HELIX 7 AA7 GLY A 133 TYR A 143 1 11 HELIX 8 AA8 PRO A 144 ILE A 150 5 7 HELIX 9 AA9 THR A 157 ASN A 170 1 14 HELIX 10 AB1 SER A 183 LYS A 188 1 6 HELIX 11 AB2 PHE A 189 ASP A 208 1 20 HELIX 12 AB3 GLY A 222 PHE A 235 1 14 HELIX 13 AB4 ASP A 245 GLU A 255 1 11 HELIX 14 AB5 THR A 261 CYS A 266 1 6 HELIX 15 AB6 LEU A 283 GLU A 288 1 6 HELIX 16 AB7 ASP A 307 ASN A 314 1 8 HELIX 17 AB8 GLU A 341 ARG A 343 5 3 HELIX 18 AB9 LEU A 344 ALA A 350 1 7 HELIX 19 AC1 PRO A 354 HIS A 375 1 22 HELIX 20 AC2 PRO A 376 TYR A 379 5 4 HELIX 21 AC3 PRO A 387 HIS A 398 1 12 HELIX 22 AC4 LEU A 399 ASN A 403 5 5 HELIX 23 AC5 THR A 410 GLY A 418 1 9 HELIX 24 AC6 ASP B 11 GLY B 13 5 3 HELIX 25 AC7 LEU B 14 GLU B 28 1 15 HELIX 26 AC8 MET B 29 SER B 40 1 12 HELIX 27 AC9 THR B 57 LEU B 70 1 14 HELIX 28 AD1 GLN B 85 ALA B 95 1 11 HELIX 29 AD2 THR B 106 GLN B 116 1 11 HELIX 30 AD3 GLY B 133 LYS B 142 1 10 HELIX 31 AD4 TYR B 143 ILE B 150 5 8 HELIX 32 AD5 THR B 157 ASN B 170 1 14 HELIX 33 AD6 SER B 183 LYS B 188 1 6 HELIX 34 AD7 ASN B 191 ASP B 208 1 18 HELIX 35 AD8 GLY B 222 PHE B 235 1 14 HELIX 36 AD9 ASP B 245 GLU B 255 1 11 HELIX 37 AE1 THR B 261 CYS B 266 1 6 HELIX 38 AE2 LEU B 283 GLU B 288 1 6 HELIX 39 AE3 ASP B 307 ALA B 315 1 9 HELIX 40 AE4 GLU B 341 ARG B 343 5 3 HELIX 41 AE5 LEU B 344 ALA B 350 1 7 HELIX 42 AE6 PRO B 354 HIS B 375 1 22 HELIX 43 AE7 PRO B 376 TYR B 379 5 4 HELIX 44 AE8 PRO B 387 GLY B 400 1 14 HELIX 45 AE9 LYS B 401 ASN B 403 5 3 HELIX 46 AF1 THR B 410 GLY B 418 1 9 SHEET 1 AA1 8 LYS A 8 VAL A 9 0 SHEET 2 AA1 8 VAL A 99 ALA A 101 1 O VAL A 99 N LYS A 8 SHEET 3 AA1 8 GLU A 73 SER A 77 1 N TRP A 76 O PHE A 100 SHEET 4 AA1 8 ARG A 49 CYS A 53 1 N GLY A 52 O ARG A 75 SHEET 5 AA1 8 MET A 127 ASP A 130 1 O LEU A 129 N CYS A 53 SHEET 6 AA1 8 GLY A 152 GLU A 155 1 O SER A 154 N ASP A 130 SHEET 7 AA1 8 ALA A 177 ASN A 179 1 O ILE A 178 N ILE A 153 SHEET 8 AA1 8 VAL A 383 HIS A 384 1 O HIS A 384 N ASN A 179 SHEET 1 AA2 2 HIS A 119 PHE A 120 0 SHEET 2 AA2 2 GLY A 123 PRO A 124 -1 O GLY A 123 N PHE A 120 SHEET 1 AA3 8 GLU A 258 VAL A 259 0 SHEET 2 AA3 8 ARG A 238 THR A 242 1 N ILE A 241 O GLU A 258 SHEET 3 AA3 8 VAL A 215 ALA A 219 1 N VAL A 218 O ILE A 240 SHEET 4 AA3 8 ILE A 271 THR A 274 1 O ILE A 271 N VAL A 217 SHEET 5 AA3 8 ALA A 294 ASN A 298 1 O ILE A 295 N PHE A 272 SHEET 6 AA3 8 ARG A 335 LEU A 339 1 O ILE A 337 N ALA A 294 SHEET 7 AA3 8 VAL A 325 LEU A 330 -1 N ASP A 326 O LEU A 338 SHEET 8 AA3 8 ALA A 315 LYS A 322 -1 N VAL A 319 O ARG A 327 SHEET 1 AA4 7 VAL B 99 PHE B 100 0 SHEET 2 AA4 7 GLU B 73 SER B 77 1 N TRP B 76 O PHE B 100 SHEET 3 AA4 7 ARG B 49 CYS B 53 1 N GLY B 52 O ARG B 75 SHEET 4 AA4 7 MET B 127 ASP B 130 1 O MET B 127 N ALA B 51 SHEET 5 AA4 7 GLY B 152 GLU B 155 1 O SER B 154 N ASP B 130 SHEET 6 AA4 7 ALA B 177 ASN B 179 1 O ILE B 178 N ILE B 153 SHEET 7 AA4 7 VAL B 383 HIS B 384 1 O HIS B 384 N ASN B 179 SHEET 1 AA5 2 HIS B 119 PHE B 120 0 SHEET 2 AA5 2 GLY B 123 PRO B 124 -1 O GLY B 123 N PHE B 120 SHEET 1 AA6 8 GLU B 258 VAL B 259 0 SHEET 2 AA6 8 ARG B 238 THR B 242 1 N ILE B 241 O GLU B 258 SHEET 3 AA6 8 VAL B 215 ALA B 219 1 N VAL B 218 O ILE B 240 SHEET 4 AA6 8 ILE B 271 THR B 274 1 O ILE B 271 N VAL B 217 SHEET 5 AA6 8 ALA B 294 ASN B 298 1 O CYS B 297 N PHE B 272 SHEET 6 AA6 8 ARG B 335 LEU B 339 1 O ILE B 337 N VAL B 296 SHEET 7 AA6 8 VAL B 325 TRP B 329 -1 N TYR B 328 O ILE B 336 SHEET 8 AA6 8 GLU B 317 LYS B 322 -1 N GLU B 317 O TRP B 329 LINK OE1 GLU A 59 NA NA A 603 1555 1555 3.10 LINK OE2 GLU A 59 NA NA A 603 1555 1555 3.03 LINK O MET A 351 NA NA A 603 1555 1555 2.86 LINK O HIS A 353 NA NA A 603 1555 1555 2.73 LINK NA NA A 603 O HOH A 809 1555 1555 2.77 LINK NA NA A 603 O HOH A 813 1555 1555 3.18 LINK OE1 GLU B 59 NA NA B 603 1555 1555 2.87 LINK O MET B 351 NA NA B 603 1555 1555 2.88 LINK O HIS B 353 NA NA B 603 1555 1555 2.91 LINK NA NA B 603 O HOH B 733 1555 1555 2.76 LINK NA NA B 603 O HOH B 799 1555 1555 2.65 CISPEP 1 GLY A 423 PRO A 424 0 1.86 CISPEP 2 GLY B 423 PRO B 424 0 4.83 CRYST1 98.220 102.526 173.408 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010181 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009754 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005767 0.00000