HEADER VIRUS 03-MAR-23 8CPY TITLE EXTENDED COWPEA CHLOROTIC MOTTLE VIRUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: C, D, I; COMPND 4 SYNONYM: CP,COAT PROTEIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: COWPEA CHLOROTIC MOTTLE VIRUS; SOURCE 3 ORGANISM_TAXID: 12303 KEYWDS ICOSAHEDRAL, EXTENDED, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR O.F.HARDER,S.V.BARRASS,M.DRABBELS,U.J.LORENZ REVDAT 1 27-SEP-23 8CPY 0 JRNL AUTH O.F.HARDER,S.V.BARRASS,M.DRABBELS,U.J.LORENZ JRNL TITL FAST VIRAL DYNAMICS REVEALED BY MICROSECOND TIME-RESOLVED JRNL TITL 2 CRYO-EM. JRNL REF NAT COMMUN V. 14 5649 2023 JRNL REFN ESSN 2041-1723 JRNL PMID 37704664 JRNL DOI 10.1038/S41467-023-41444-X REMARK 2 REMARK 2 RESOLUTION. 3.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC, ISOLDE, PHENIX, REMARK 3 CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : OTHER REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.900 REMARK 3 NUMBER OF PARTICLES : 30095 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 8CPY COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE. REMARK 100 THE DEPOSITION ID IS D_1292128951. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : COWPEA CHLOROTIC MOTTLE VIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 4.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 300.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 900.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 72.60 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: 180-MERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.309017 -0.809017 451.07551 REMARK 350 BIOMT2 2 -0.309017 0.809017 -0.500000 278.78000 REMARK 350 BIOMT3 2 0.809017 0.500000 0.309017 -172.29551 REMARK 350 BIOMT1 3 0.000000 0.000000 -1.000000 557.56000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 557.56000 REMARK 350 BIOMT3 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 -0.309017 -0.809017 729.85551 REMARK 350 BIOMT2 4 0.309017 0.809017 -0.500000 106.48448 REMARK 350 BIOMT3 4 0.809017 -0.500000 -0.309017 278.78000 REMARK 350 BIOMT1 5 -0.500000 0.309017 -0.809017 557.56000 REMARK 350 BIOMT2 5 0.309017 -0.809017 -0.500000 557.56000 REMARK 350 BIOMT3 5 -0.809017 -0.500000 0.309017 557.56000 REMARK 350 BIOMT1 6 -0.309017 -0.809017 -0.500000 729.85551 REMARK 350 BIOMT2 6 0.809017 -0.500000 0.309017 106.48448 REMARK 350 BIOMT3 6 -0.500000 -0.309017 0.809017 278.78000 REMARK 350 BIOMT1 7 -0.809017 0.500000 -0.309017 451.07551 REMARK 350 BIOMT2 7 -0.500000 -0.309017 0.809017 278.78000 REMARK 350 BIOMT3 7 0.309017 0.809017 0.500000 -172.29551 REMARK 350 BIOMT1 8 0.500000 0.309017 -0.809017 278.78000 REMARK 350 BIOMT2 8 0.309017 0.809017 0.500000 -172.29551 REMARK 350 BIOMT3 8 0.809017 -0.500000 0.309017 106.48448 REMARK 350 BIOMT1 9 -0.500000 0.309017 -0.809017 557.56000 REMARK 350 BIOMT2 9 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 9 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 10 0.000000 0.000000 -1.000000 557.56000 REMARK 350 BIOMT2 10 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 10 0.000000 -1.000000 0.000000 557.56000 REMARK 350 BIOMT1 11 -0.500000 -0.309017 -0.809017 729.85551 REMARK 350 BIOMT2 11 -0.309017 -0.809017 0.500000 451.07551 REMARK 350 BIOMT3 11 -0.809017 0.500000 0.309017 278.78000 REMARK 350 BIOMT1 12 -0.809017 -0.500000 0.309017 557.56000 REMARK 350 BIOMT2 12 -0.500000 0.309017 -0.809017 557.56000 REMARK 350 BIOMT3 12 0.309017 -0.809017 -0.500000 557.56000 REMARK 350 BIOMT1 13 0.000000 -1.000000 0.000000 557.56000 REMARK 350 BIOMT2 13 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 13 -1.000000 0.000000 0.000000 557.56000 REMARK 350 BIOMT1 14 -0.809017 0.500000 0.309017 278.78000 REMARK 350 BIOMT2 14 0.500000 0.309017 0.809017 -172.29551 REMARK 350 BIOMT3 14 0.309017 0.809017 -0.500000 106.48448 REMARK 350 BIOMT1 15 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 15 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 15 0.309017 -0.809017 -0.500000 557.56000 REMARK 350 BIOMT1 16 -0.309017 0.809017 -0.500000 278.78000 REMARK 350 BIOMT2 16 0.809017 0.500000 0.309017 -172.29551 REMARK 350 BIOMT3 16 0.500000 -0.309017 -0.809017 451.07551 REMARK 350 BIOMT1 17 0.500000 -0.309017 -0.809017 451.07551 REMARK 350 BIOMT2 17 0.309017 -0.809017 0.500000 278.78000 REMARK 350 BIOMT3 17 -0.809017 -0.500000 -0.309017 729.85551 REMARK 350 BIOMT1 18 -0.809017 -0.500000 -0.309017 729.85551 REMARK 350 BIOMT2 18 -0.500000 0.309017 0.809017 106.48448 REMARK 350 BIOMT3 18 -0.309017 0.809017 -0.500000 278.78000 REMARK 350 BIOMT1 19 -0.309017 -0.809017 0.500000 451.07551 REMARK 350 BIOMT2 19 -0.809017 0.500000 0.309017 278.78000 REMARK 350 BIOMT3 19 -0.500000 -0.309017 -0.809017 729.85551 REMARK 350 BIOMT1 20 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 0.309017 -0.809017 557.56000 REMARK 350 BIOMT1 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 21 0.000000 -1.000000 0.000000 557.56000 REMARK 350 BIOMT3 21 0.000000 0.000000 -1.000000 557.56000 REMARK 350 BIOMT1 22 0.309017 0.809017 -0.500000 106.48448 REMARK 350 BIOMT2 22 0.809017 -0.500000 -0.309017 278.78000 REMARK 350 BIOMT3 22 -0.500000 -0.309017 -0.809017 729.85551 REMARK 350 BIOMT1 23 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 23 0.000000 0.000000 -1.000000 557.56000 REMARK 350 BIOMT3 23 -1.000000 0.000000 0.000000 557.56000 REMARK 350 BIOMT1 24 0.309017 -0.809017 -0.500000 557.56000 REMARK 350 BIOMT2 24 -0.809017 -0.500000 0.309017 557.56000 REMARK 350 BIOMT3 24 -0.500000 0.309017 -0.809017 557.56000 REMARK 350 BIOMT1 25 -1.000000 0.000000 0.000000 557.56000 REMARK 350 BIOMT2 25 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 25 0.000000 0.000000 -1.000000 557.56000 REMARK 350 BIOMT1 26 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 26 -0.500000 0.309017 -0.809017 557.56000 REMARK 350 BIOMT3 26 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 27 0.000000 -1.000000 0.000000 557.56000 REMARK 350 BIOMT2 27 0.000000 0.000000 -1.000000 557.56000 REMARK 350 BIOMT3 27 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 28 -0.809017 0.500000 0.309017 278.78000 REMARK 350 BIOMT2 28 -0.500000 -0.309017 -0.809017 729.85551 REMARK 350 BIOMT3 28 -0.309017 -0.809017 0.500000 451.07551 REMARK 350 BIOMT1 29 -0.500000 -0.309017 0.809017 278.78000 REMARK 350 BIOMT2 29 -0.309017 -0.809017 -0.500000 729.85551 REMARK 350 BIOMT3 29 0.809017 -0.500000 0.309017 106.48448 REMARK 350 BIOMT1 30 0.309017 0.809017 0.500000 -172.29551 REMARK 350 BIOMT2 30 -0.809017 0.500000 -0.309017 451.07551 REMARK 350 BIOMT3 30 -0.500000 -0.309017 0.809017 278.78000 REMARK 350 BIOMT1 31 0.809017 -0.500000 0.309017 106.48448 REMARK 350 BIOMT2 31 0.500000 0.309017 -0.809017 278.78000 REMARK 350 BIOMT3 31 0.309017 0.809017 0.500000 -172.29551 REMARK 350 BIOMT1 32 0.809017 0.500000 0.309017 -172.29551 REMARK 350 BIOMT2 32 0.500000 -0.309017 -0.809017 451.07551 REMARK 350 BIOMT3 32 -0.309017 0.809017 -0.500000 278.78000 REMARK 350 BIOMT1 33 0.309017 -0.809017 0.500000 278.78000 REMARK 350 BIOMT2 33 -0.809017 -0.500000 -0.309017 729.85551 REMARK 350 BIOMT3 33 0.500000 -0.309017 -0.809017 451.07551 REMARK 350 BIOMT1 34 0.809017 -0.500000 -0.309017 278.78000 REMARK 350 BIOMT2 34 -0.500000 -0.309017 -0.809017 729.85551 REMARK 350 BIOMT3 34 0.309017 0.809017 -0.500000 106.48448 REMARK 350 BIOMT1 35 -0.500000 0.309017 0.809017 106.48448 REMARK 350 BIOMT2 35 -0.309017 0.809017 -0.500000 278.78000 REMARK 350 BIOMT3 35 -0.809017 -0.500000 -0.309017 729.85551 REMARK 350 BIOMT1 36 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 36 -1.000000 0.000000 0.000000 557.56000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 557.56000 REMARK 350 BIOMT1 37 0.500000 0.309017 0.809017 -172.29551 REMARK 350 BIOMT2 37 0.309017 0.809017 -0.500000 106.48448 REMARK 350 BIOMT3 37 -0.809017 0.500000 0.309017 278.78000 REMARK 350 BIOMT1 38 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 38 0.309017 -0.809017 -0.500000 557.56000 REMARK 350 BIOMT3 38 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 39 0.309017 0.809017 0.500000 -172.29551 REMARK 350 BIOMT2 39 0.809017 -0.500000 0.309017 106.48448 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 278.78000 REMARK 350 BIOMT1 40 0.809017 -0.500000 0.309017 106.48448 REMARK 350 BIOMT2 40 -0.500000 -0.309017 0.809017 278.78000 REMARK 350 BIOMT3 40 -0.309017 -0.809017 -0.500000 729.85551 REMARK 350 BIOMT1 41 -0.500000 -0.309017 0.809017 278.78000 REMARK 350 BIOMT2 41 0.309017 0.809017 0.500000 -172.29551 REMARK 350 BIOMT3 41 -0.809017 0.500000 -0.309017 451.07551 REMARK 350 BIOMT1 42 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 42 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 42 -0.809017 -0.500000 0.309017 557.56000 REMARK 350 BIOMT1 43 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 43 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 43 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 44 0.500000 0.309017 0.809017 -172.29551 REMARK 350 BIOMT2 44 -0.309017 -0.809017 0.500000 451.07551 REMARK 350 BIOMT3 44 0.809017 -0.500000 -0.309017 278.78000 REMARK 350 BIOMT1 45 0.500000 0.309017 -0.809017 278.78000 REMARK 350 BIOMT2 45 -0.309017 -0.809017 -0.500000 729.85551 REMARK 350 BIOMT3 45 -0.809017 0.500000 -0.309017 451.07551 REMARK 350 BIOMT1 46 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 0.809017 -0.500000 -0.309017 278.78000 REMARK 350 BIOMT2 47 0.500000 0.309017 0.809017 -172.29551 REMARK 350 BIOMT3 47 -0.309017 -0.809017 0.500000 451.07551 REMARK 350 BIOMT1 48 -0.809017 -0.500000 0.309017 557.56000 REMARK 350 BIOMT2 48 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 49 0.309017 -0.809017 0.500000 278.78000 REMARK 350 BIOMT2 49 0.809017 0.500000 0.309017 -172.29551 REMARK 350 BIOMT3 49 -0.500000 0.309017 0.809017 106.48448 REMARK 350 BIOMT1 50 -0.500000 0.309017 0.809017 106.48448 REMARK 350 BIOMT2 50 0.309017 -0.809017 0.500000 278.78000 REMARK 350 BIOMT3 50 0.809017 0.500000 0.309017 -172.29551 REMARK 350 BIOMT1 51 0.809017 0.500000 0.309017 -172.29551 REMARK 350 BIOMT2 51 -0.500000 0.309017 0.809017 106.48448 REMARK 350 BIOMT3 51 0.309017 -0.809017 0.500000 278.78000 REMARK 350 BIOMT1 52 0.309017 0.809017 -0.500000 106.48448 REMARK 350 BIOMT2 52 -0.809017 0.500000 0.309017 278.78000 REMARK 350 BIOMT3 52 0.500000 0.309017 0.809017 -172.29551 REMARK 350 BIOMT1 53 0.309017 -0.809017 -0.500000 557.56000 REMARK 350 BIOMT2 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 54 -1.000000 0.000000 0.000000 557.56000 REMARK 350 BIOMT2 54 0.000000 -1.000000 0.000000 557.56000 REMARK 350 BIOMT3 54 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 55 -0.309017 -0.809017 0.500000 451.07551 REMARK 350 BIOMT2 55 0.809017 -0.500000 -0.309017 278.78000 REMARK 350 BIOMT3 55 0.500000 0.309017 0.809017 -172.29551 REMARK 350 BIOMT1 56 -0.309017 -0.809017 -0.500000 729.85551 REMARK 350 BIOMT2 56 -0.809017 0.500000 -0.309017 451.07551 REMARK 350 BIOMT3 56 0.500000 0.309017 -0.809017 278.78000 REMARK 350 BIOMT1 57 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 57 -0.809017 -0.500000 0.309017 557.56000 REMARK 350 BIOMT3 57 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 58 -0.809017 0.500000 -0.309017 451.07551 REMARK 350 BIOMT2 58 0.500000 0.309017 -0.809017 278.78000 REMARK 350 BIOMT3 58 -0.309017 -0.809017 -0.500000 729.85551 REMARK 350 BIOMT1 59 -0.809017 -0.500000 -0.309017 729.85551 REMARK 350 BIOMT2 59 0.500000 -0.309017 -0.809017 451.07551 REMARK 350 BIOMT3 59 0.309017 -0.809017 0.500000 278.78000 REMARK 350 BIOMT1 60 -0.309017 0.809017 -0.500000 278.78000 REMARK 350 BIOMT2 60 -0.809017 -0.500000 -0.309017 729.85551 REMARK 350 BIOMT3 60 -0.500000 0.309017 0.809017 106.48448 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET C 1 REMARK 465 SER C 2 REMARK 465 THR C 3 REMARK 465 VAL C 4 REMARK 465 GLY C 5 REMARK 465 THR C 6 REMARK 465 GLY C 7 REMARK 465 LYS C 8 REMARK 465 LEU C 9 REMARK 465 THR C 10 REMARK 465 ARG C 11 REMARK 465 ALA C 12 REMARK 465 GLN C 13 REMARK 465 ARG C 14 REMARK 465 ARG C 15 REMARK 465 ALA C 16 REMARK 465 ALA C 17 REMARK 465 ALA C 18 REMARK 465 ARG C 19 REMARK 465 LYS C 20 REMARK 465 ASN C 21 REMARK 465 LYS C 22 REMARK 465 ARG C 23 REMARK 465 ASN C 24 REMARK 465 THR C 25 REMARK 465 ARG C 26 REMARK 465 VAL C 27 REMARK 465 VAL C 28 REMARK 465 GLN C 29 REMARK 465 PRO C 30 REMARK 465 VAL C 31 REMARK 465 ILE C 32 REMARK 465 VAL C 33 REMARK 465 GLU C 34 REMARK 465 PRO C 35 REMARK 465 ILE C 36 REMARK 465 ALA C 37 REMARK 465 SER C 38 REMARK 465 GLY C 39 REMARK 465 GLN C 40 REMARK 465 GLY C 41 REMARK 465 LYS C 42 REMARK 465 TYR C 190 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 THR D 3 REMARK 465 VAL D 4 REMARK 465 GLY D 5 REMARK 465 THR D 6 REMARK 465 GLY D 7 REMARK 465 LYS D 8 REMARK 465 LEU D 9 REMARK 465 THR D 10 REMARK 465 ARG D 11 REMARK 465 ALA D 12 REMARK 465 GLN D 13 REMARK 465 ARG D 14 REMARK 465 ARG D 15 REMARK 465 ALA D 16 REMARK 465 ALA D 17 REMARK 465 ALA D 18 REMARK 465 ARG D 19 REMARK 465 LYS D 20 REMARK 465 ASN D 21 REMARK 465 LYS D 22 REMARK 465 ARG D 23 REMARK 465 ASN D 24 REMARK 465 THR D 25 REMARK 465 ARG D 26 REMARK 465 VAL D 27 REMARK 465 VAL D 28 REMARK 465 GLN D 29 REMARK 465 PRO D 30 REMARK 465 VAL D 31 REMARK 465 ILE D 32 REMARK 465 VAL D 33 REMARK 465 GLU D 34 REMARK 465 PRO D 35 REMARK 465 ILE D 36 REMARK 465 ALA D 37 REMARK 465 SER D 38 REMARK 465 GLY D 39 REMARK 465 GLN D 40 REMARK 465 VAL D 189 REMARK 465 TYR D 190 REMARK 465 MET I 1 REMARK 465 SER I 2 REMARK 465 THR I 3 REMARK 465 VAL I 4 REMARK 465 GLY I 5 REMARK 465 THR I 6 REMARK 465 GLY I 7 REMARK 465 LYS I 8 REMARK 465 LEU I 9 REMARK 465 THR I 10 REMARK 465 ARG I 11 REMARK 465 ALA I 12 REMARK 465 GLN I 13 REMARK 465 ARG I 14 REMARK 465 ARG I 15 REMARK 465 ALA I 16 REMARK 465 ALA I 17 REMARK 465 ALA I 18 REMARK 465 ARG I 19 REMARK 465 LYS I 20 REMARK 465 ASN I 21 REMARK 465 LYS I 22 REMARK 465 ARG I 23 REMARK 465 ASN I 24 REMARK 465 THR I 25 REMARK 465 ARG I 26 REMARK 465 VAL I 27 REMARK 465 VAL I 28 REMARK 465 GLN I 29 REMARK 465 PRO I 30 REMARK 465 VAL I 31 REMARK 465 ILE I 32 REMARK 465 VAL I 33 REMARK 465 GLU I 34 REMARK 465 PRO I 35 REMARK 465 ILE I 36 REMARK 465 ALA I 37 REMARK 465 SER I 38 REMARK 465 GLY I 39 REMARK 465 GLN I 40 REMARK 465 GLY I 41 REMARK 465 PRO I 188 REMARK 465 VAL I 189 REMARK 465 TYR I 190 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG C 179 109.86 -54.07 REMARK 500 ILE D 44 97.31 -66.19 REMARK 500 ALA D 57 106.66 -162.49 REMARK 500 ALA D 136 114.62 -166.49 REMARK 500 TYR D 138 74.16 -114.44 REMARK 500 LYS I 65 10.64 56.31 REMARK 500 TYR I 138 76.88 -108.71 REMARK 500 SER I 185 -172.32 -170.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8C38 RELATED DB: PDB REMARK 900 CONTRACTED CCMV REMARK 900 RELATED ID: EMD-16790 RELATED DB: EMDB REMARK 900 EXTENDED COWPEA CHLOROTIC MOTTLE VIRUS DBREF 8CPY C 1 190 UNP P03601 CAPSD_CCMV 1 190 DBREF 8CPY D 1 190 UNP P03601 CAPSD_CCMV 1 190 DBREF 8CPY I 1 190 UNP P03601 CAPSD_CCMV 1 190 SEQRES 1 C 190 MET SER THR VAL GLY THR GLY LYS LEU THR ARG ALA GLN SEQRES 2 C 190 ARG ARG ALA ALA ALA ARG LYS ASN LYS ARG ASN THR ARG SEQRES 3 C 190 VAL VAL GLN PRO VAL ILE VAL GLU PRO ILE ALA SER GLY SEQRES 4 C 190 GLN GLY LYS ALA ILE LYS ALA TRP THR GLY TYR SER VAL SEQRES 5 C 190 SER LYS TRP THR ALA SER CYS ALA ALA ALA GLU ALA LYS SEQRES 6 C 190 VAL THR SER ALA ILE THR ILE SER LEU PRO ASN GLU LEU SEQRES 7 C 190 SER SER GLU ARG ASN LYS GLN LEU LYS VAL GLY ARG VAL SEQRES 8 C 190 LEU LEU TRP LEU GLY LEU LEU PRO SER VAL SER GLY THR SEQRES 9 C 190 VAL LYS SER CYS VAL THR GLU THR GLN THR THR ALA ALA SEQRES 10 C 190 ALA SER PHE GLN VAL ALA LEU ALA VAL ALA ASP ASN SER SEQRES 11 C 190 LYS ASP VAL VAL ALA ALA MET TYR PRO GLU ALA PHE LYS SEQRES 12 C 190 GLY ILE THR LEU GLU GLN LEU THR ALA ASP LEU THR ILE SEQRES 13 C 190 TYR LEU TYR SER SER ALA ALA LEU THR GLU GLY ASP VAL SEQRES 14 C 190 ILE VAL HIS LEU GLU VAL GLU HIS VAL ARG PRO THR PHE SEQRES 15 C 190 ASP ASP SER PHE THR PRO VAL TYR SEQRES 1 D 190 MET SER THR VAL GLY THR GLY LYS LEU THR ARG ALA GLN SEQRES 2 D 190 ARG ARG ALA ALA ALA ARG LYS ASN LYS ARG ASN THR ARG SEQRES 3 D 190 VAL VAL GLN PRO VAL ILE VAL GLU PRO ILE ALA SER GLY SEQRES 4 D 190 GLN GLY LYS ALA ILE LYS ALA TRP THR GLY TYR SER VAL SEQRES 5 D 190 SER LYS TRP THR ALA SER CYS ALA ALA ALA GLU ALA LYS SEQRES 6 D 190 VAL THR SER ALA ILE THR ILE SER LEU PRO ASN GLU LEU SEQRES 7 D 190 SER SER GLU ARG ASN LYS GLN LEU LYS VAL GLY ARG VAL SEQRES 8 D 190 LEU LEU TRP LEU GLY LEU LEU PRO SER VAL SER GLY THR SEQRES 9 D 190 VAL LYS SER CYS VAL THR GLU THR GLN THR THR ALA ALA SEQRES 10 D 190 ALA SER PHE GLN VAL ALA LEU ALA VAL ALA ASP ASN SER SEQRES 11 D 190 LYS ASP VAL VAL ALA ALA MET TYR PRO GLU ALA PHE LYS SEQRES 12 D 190 GLY ILE THR LEU GLU GLN LEU THR ALA ASP LEU THR ILE SEQRES 13 D 190 TYR LEU TYR SER SER ALA ALA LEU THR GLU GLY ASP VAL SEQRES 14 D 190 ILE VAL HIS LEU GLU VAL GLU HIS VAL ARG PRO THR PHE SEQRES 15 D 190 ASP ASP SER PHE THR PRO VAL TYR SEQRES 1 I 190 MET SER THR VAL GLY THR GLY LYS LEU THR ARG ALA GLN SEQRES 2 I 190 ARG ARG ALA ALA ALA ARG LYS ASN LYS ARG ASN THR ARG SEQRES 3 I 190 VAL VAL GLN PRO VAL ILE VAL GLU PRO ILE ALA SER GLY SEQRES 4 I 190 GLN GLY LYS ALA ILE LYS ALA TRP THR GLY TYR SER VAL SEQRES 5 I 190 SER LYS TRP THR ALA SER CYS ALA ALA ALA GLU ALA LYS SEQRES 6 I 190 VAL THR SER ALA ILE THR ILE SER LEU PRO ASN GLU LEU SEQRES 7 I 190 SER SER GLU ARG ASN LYS GLN LEU LYS VAL GLY ARG VAL SEQRES 8 I 190 LEU LEU TRP LEU GLY LEU LEU PRO SER VAL SER GLY THR SEQRES 9 I 190 VAL LYS SER CYS VAL THR GLU THR GLN THR THR ALA ALA SEQRES 10 I 190 ALA SER PHE GLN VAL ALA LEU ALA VAL ALA ASP ASN SER SEQRES 11 I 190 LYS ASP VAL VAL ALA ALA MET TYR PRO GLU ALA PHE LYS SEQRES 12 I 190 GLY ILE THR LEU GLU GLN LEU THR ALA ASP LEU THR ILE SEQRES 13 I 190 TYR LEU TYR SER SER ALA ALA LEU THR GLU GLY ASP VAL SEQRES 14 I 190 ILE VAL HIS LEU GLU VAL GLU HIS VAL ARG PRO THR PHE SEQRES 15 I 190 ASP ASP SER PHE THR PRO VAL TYR HELIX 1 AA1 PRO C 75 SER C 79 5 5 HELIX 2 AA2 SER C 80 GLN C 85 1 6 HELIX 3 AA3 ALA C 116 VAL C 122 5 7 HELIX 4 AA4 THR C 146 ASP C 153 1 8 HELIX 5 AA5 PRO D 75 SER D 79 5 5 HELIX 6 AA6 SER D 80 GLN D 85 1 6 HELIX 7 AA7 ALA D 118 ALA D 123 1 6 HELIX 8 AA8 THR D 146 ASP D 153 1 8 HELIX 9 AA9 SER I 80 GLN I 85 1 6 HELIX 10 AB1 ALA I 117 ALA I 123 1 7 HELIX 11 AB2 THR I 146 ASP I 153 1 8 SHEET 1 AA1 4 TYR C 50 SER C 58 0 SHEET 2 AA1 4 VAL C 169 VAL C 178 -1 O LEU C 173 N TRP C 55 SHEET 3 AA1 4 VAL C 88 LEU C 97 -1 N LEU C 92 O GLU C 174 SHEET 4 AA1 4 ALA C 135 TYR C 138 -1 O ALA C 136 N LEU C 93 SHEET 1 AA2 4 THR C 67 ILE C 70 0 SHEET 2 AA2 4 LEU C 154 SER C 160 -1 O ILE C 156 N ILE C 70 SHEET 3 AA2 4 VAL C 105 GLU C 111 -1 N LYS C 106 O TYR C 159 SHEET 4 AA2 4 ALA C 127 ASP C 128 -1 O ALA C 127 N SER C 107 SHEET 1 AA3 4 TYR D 50 TRP D 55 0 SHEET 2 AA3 4 VAL D 169 VAL D 178 -1 O HIS D 177 N SER D 51 SHEET 3 AA3 4 VAL D 88 LEU D 97 -1 N GLY D 89 O GLU D 176 SHEET 4 AA3 4 ALA D 135 TYR D 138 -1 O TYR D 138 N VAL D 91 SHEET 1 AA4 4 THR D 67 ILE D 70 0 SHEET 2 AA4 4 LEU D 154 SER D 160 -1 O ILE D 156 N ILE D 70 SHEET 3 AA4 4 VAL D 105 GLU D 111 -1 N LYS D 106 O TYR D 159 SHEET 4 AA4 4 ALA D 127 ASP D 128 -1 O ALA D 127 N SER D 107 SHEET 1 AA5 3 TYR I 50 LYS I 54 0 SHEET 2 AA5 3 VAL I 169 VAL I 178 -1 O HIS I 177 N SER I 51 SHEET 3 AA5 3 ALA I 57 SER I 58 -1 N ALA I 57 O VAL I 171 SHEET 1 AA6 4 TYR I 50 LYS I 54 0 SHEET 2 AA6 4 VAL I 169 VAL I 178 -1 O HIS I 177 N SER I 51 SHEET 3 AA6 4 VAL I 88 LEU I 97 -1 N TRP I 94 O HIS I 172 SHEET 4 AA6 4 ALA I 135 MET I 137 -1 O ALA I 136 N LEU I 93 SHEET 1 AA7 4 THR I 67 ILE I 70 0 SHEET 2 AA7 4 LEU I 154 SER I 160 -1 O ILE I 156 N ILE I 70 SHEET 3 AA7 4 VAL I 105 GLU I 111 -1 N LYS I 106 O TYR I 159 SHEET 4 AA7 4 ALA I 127 ASP I 128 -1 O ALA I 127 N SER I 107 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000