HEADER CYTOKINE 08-MAR-23 8CR8 TITLE HUMAN INTERLEUKIN-23 COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERLEUKIN-12 SUBUNIT BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: IL-12B,CYTOTOXIC LYMPHOCYTE MATURATION FACTOR 40 KDA COMPND 5 SUBUNIT,CLMF P40,IL-12 SUBUNIT P40,NK CELL STIMULATORY FACTOR CHAIN COMPND 6 2,NKSF2; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 OTHER_DETAILS: RESIDUES [1-17] ENCODE A SECRETION SIGNAL THAT IS MOST COMPND 10 LIKELY CO-TRANSLATIONALY REMOVED. RESIDUES [18-19] ENCODE A SCAR TO COMPND 11 MIMIC SUCH FOUND IN PDB 3DUH.; COMPND 12 MOL_ID: 2; COMPND 13 MOLECULE: INTERLEUKIN-23 SUBUNIT ALPHA; COMPND 14 CHAIN: B; COMPND 15 SYNONYM: IL-23 SUBUNIT ALPHA,IL-23-A,INTERLEUKIN-23 SUBUNIT P19,IL- COMPND 16 23P19; COMPND 17 ENGINEERED: YES; COMPND 18 OTHER_DETAILS: N-TERMINAL MGWSCIILFLVATATGVHS ENCODE THE SECRETION COMPND 19 SIGNAL WHICH WAS MOST LIKELY REMOVED CO-TRANSLATIONALY. FOLLOWING SRN COMPND 20 ENCODE A CLONING SCAR MEANT TO MIMICK AND IMPROVE UPON THE CONSTRUCT COMPND 21 OF PDB 3DUH. C-TERMINAL HHHHHH ENCODE THE PURIFICATION TAG WHICH COMPND 22 WASN'T REMOVED. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: IL12B, NKSF2; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293S; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHLSEC; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 13 ORGANISM_COMMON: HUMAN; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 GENE: IL23A, SGRF, UNQ2498/PRO5798; SOURCE 16 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HEK293S; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHLSEC KEYWDS HETERODIMER, CYTOKINE, EXTRACELLULAR, INFLAMMATION, FIBRONECTIN TYPE KEYWDS 2 III EXPDTA X-RAY DIFFRACTION AUTHOR Y.BLOCH,S.N.SAVVIDES REVDAT 2 01-MAY-24 8CR8 1 JRNL REVDAT 1 07-FEB-24 8CR8 0 JRNL AUTH Y.BLOCH,J.FELIX,R.MERCERON,M.PROVOST,R.A.SYMAKANI, JRNL AUTH 2 R.DE BACKER,E.LAMBERT,A.R.MEHDIPOUR,S.N.SAVVIDES JRNL TITL STRUCTURES OF COMPLETE EXTRACELLULAR RECEPTOR ASSEMBLIES JRNL TITL 2 MEDIATED BY IL-12 AND IL-23. JRNL REF NAT.STRUCT.MOL.BIOL. V. 31 591 2024 JRNL REFN ESSN 1545-9985 JRNL PMID 38287195 JRNL DOI 10.1038/S41594-023-01190-6 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF ACTA CRYSTALLOGR D BIOL V. 68 352 2012 REMARK 1 REF 2 CRYSTALLOGR REMARK 1 REFN ESSN 1399-0047 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 69.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 3 NUMBER OF REFLECTIONS : 35506 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.256 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.660 REMARK 3 FREE R VALUE TEST SET COUNT : 2011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 69.3000 - 4.8200 0.98 2544 194 0.1980 0.2053 REMARK 3 2 4.8200 - 3.8300 0.99 2607 106 0.1938 0.2052 REMARK 3 3 3.8300 - 3.3400 1.00 2504 165 0.2215 0.2623 REMARK 3 4 3.3400 - 3.0400 0.99 2545 151 0.2554 0.2607 REMARK 3 5 3.0400 - 2.8200 1.00 2515 151 0.2721 0.3128 REMARK 3 6 2.8200 - 2.6500 0.99 2528 163 0.2732 0.3254 REMARK 3 7 2.6500 - 2.5200 0.99 2498 137 0.2724 0.3160 REMARK 3 8 2.5200 - 2.4100 0.99 2503 157 0.2920 0.3038 REMARK 3 9 2.4100 - 2.3200 0.99 2507 142 0.3092 0.2931 REMARK 3 10 2.3200 - 2.2400 0.99 2530 155 0.2901 0.3201 REMARK 3 11 2.2400 - 2.1700 0.95 2371 155 0.3161 0.3569 REMARK 3 12 2.1700 - 2.1100 0.87 2199 128 0.3197 0.3516 REMARK 3 13 2.1100 - 2.0500 0.78 1936 106 0.3400 0.3521 REMARK 3 14 2.0500 - 2.0000 0.68 1708 101 0.3804 0.3706 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.299 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.887 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 65.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 3598 REMARK 3 ANGLE : 0.525 4903 REMARK 3 CHIRALITY : 0.040 565 REMARK 3 PLANARITY : 0.004 617 REMARK 3 DIHEDRAL : 14.020 1308 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 21:110 OR RESID 401:401 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.310 17.800 -0.652 REMARK 3 T TENSOR REMARK 3 T11: 0.4674 T22: 0.8559 REMARK 3 T33: 0.5656 T12: -0.0681 REMARK 3 T13: 0.0139 T23: -0.3100 REMARK 3 L TENSOR REMARK 3 L11: 2.9622 L22: 3.3099 REMARK 3 L33: 3.3524 L12: 0.4824 REMARK 3 L13: 1.3806 L23: 1.9144 REMARK 3 S TENSOR REMARK 3 S11: -0.0888 S12: 0.1296 S13: 0.0618 REMARK 3 S21: 0.0341 S22: -0.6114 S23: 0.8525 REMARK 3 S31: 0.4582 S32: -1.1775 S33: -0.4296 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 111:232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.032 33.722 15.364 REMARK 3 T TENSOR REMARK 3 T11: 0.2960 T22: 0.3786 REMARK 3 T33: 0.3646 T12: -0.0405 REMARK 3 T13: 0.0508 T23: -0.0232 REMARK 3 L TENSOR REMARK 3 L11: 5.5906 L22: 2.3339 REMARK 3 L33: 5.3687 L12: 0.5496 REMARK 3 L13: 3.5598 L23: 1.4080 REMARK 3 S TENSOR REMARK 3 S11: -0.0016 S12: 0.1816 S13: 0.1962 REMARK 3 S21: -0.0990 S22: -0.1609 S23: 0.1551 REMARK 3 S31: -0.0371 S32: -0.1717 S33: -0.0049 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 233:328 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.813 53.010 33.363 REMARK 3 T TENSOR REMARK 3 T11: 0.4068 T22: 0.4221 REMARK 3 T33: 0.5029 T12: 0.0590 REMARK 3 T13: 0.0356 T23: -0.1206 REMARK 3 L TENSOR REMARK 3 L11: 3.3129 L22: 5.5287 REMARK 3 L33: 3.6798 L12: 1.3018 REMARK 3 L13: 0.6289 L23: 0.0271 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: -0.3353 S13: 0.6501 REMARK 3 S21: 0.2693 S22: -0.1808 S23: 0.4404 REMARK 3 S31: -0.5148 S32: -0.2806 S33: 0.0213 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 27:189 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.570 28.544 28.260 REMARK 3 T TENSOR REMARK 3 T11: 0.3355 T22: 0.2719 REMARK 3 T33: 0.3569 T12: 0.0539 REMARK 3 T13: -0.0391 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 6.2498 L22: 4.5560 REMARK 3 L33: 3.3119 L12: -1.3032 REMARK 3 L13: 0.1861 L23: 0.2222 REMARK 3 S TENSOR REMARK 3 S11: 0.1614 S12: 0.3582 S13: -0.3452 REMARK 3 S21: -0.1562 S22: -0.2205 S23: -0.2867 REMARK 3 S31: 0.0652 S32: 0.0997 S33: -0.1513 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8CR8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAR-23. REMARK 100 THE DEPOSITION ID IS D_1292129069. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 20200131 REMARK 200 DATA SCALING SOFTWARE : XDS 20200131 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35521 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 69.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.3 REMARK 200 DATA REDUNDANCY : 6.580 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.45 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.05 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: (MORPHEUS2 E7) 2MM LANTHANIDES, 0.1M REMARK 280 BES/ TEA, 10% PEG8000,20% 1.5-PENTANEDIOL, PH 7.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 29.92100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 4 REMARK 465 GLY A 5 REMARK 465 VAL A 6 REMARK 465 LYS A 7 REMARK 465 VAL A 8 REMARK 465 LEU A 9 REMARK 465 PHE A 10 REMARK 465 ALA A 11 REMARK 465 LEU A 12 REMARK 465 ILE A 13 REMARK 465 CYS A 14 REMARK 465 ILE A 15 REMARK 465 ALA A 16 REMARK 465 VAL A 17 REMARK 465 ALA A 18 REMARK 465 GLU A 19 REMARK 465 ALA A 20 REMARK 465 THR A 52 REMARK 465 PRO A 53 REMARK 465 GLU A 54 REMARK 465 ASN A 248 REMARK 465 SER A 281 REMARK 465 LYS A 282 REMARK 465 ARG A 283 REMARK 465 GLU A 284 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 TRP B 2 REMARK 465 SER B 3 REMARK 465 CYS B 4 REMARK 465 ILE B 5 REMARK 465 ILE B 6 REMARK 465 LEU B 7 REMARK 465 PHE B 8 REMARK 465 LEU B 9 REMARK 465 VAL B 10 REMARK 465 ALA B 11 REMARK 465 THR B 12 REMARK 465 ALA B 13 REMARK 465 THR B 14 REMARK 465 GLY B 15 REMARK 465 VAL B 16 REMARK 465 HIS B 17 REMARK 465 SER B 18 REMARK 465 SER B 19 REMARK 465 ARG B 20 REMARK 465 ASN B 21 REMARK 465 VAL B 22 REMARK 465 PRO B 23 REMARK 465 GLY B 24 REMARK 465 GLY B 25 REMARK 465 SER B 26 REMARK 465 LEU B 50 REMARK 465 VAL B 51 REMARK 465 GLY B 52 REMARK 465 HIS B 53 REMARK 465 MET B 54 REMARK 465 ASP B 55 REMARK 465 LEU B 56 REMARK 465 ARG B 57 REMARK 465 GLU B 58 REMARK 465 GLU B 59 REMARK 465 GLY B 60 REMARK 465 ASP B 61 REMARK 465 GLU B 62 REMARK 465 GLU B 63 REMARK 465 THR B 64 REMARK 465 THR B 65 REMARK 465 GLN B 145 REMARK 465 GLN B 146 REMARK 465 ILE B 147 REMARK 465 PRO B 148 REMARK 465 SER B 149 REMARK 465 LEU B 150 REMARK 465 SER B 151 REMARK 465 PRO B 152 REMARK 465 SER B 153 REMARK 465 HIS B 190 REMARK 465 HIS B 191 REMARK 465 HIS B 192 REMARK 465 HIS B 193 REMARK 465 HIS B 194 REMARK 465 HIS B 195 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 64 CG CD OE1 NE2 REMARK 470 GLU A 67 CG CD OE1 OE2 REMARK 470 LYS A 124 CG CD CE NZ REMARK 470 ARG A 130 NE CZ NH1 NH2 REMARK 470 LYS A 157 CE NZ REMARK 470 ARG A 181 CD NE CZ NH1 NH2 REMARK 470 LYS A 185 CE NZ REMARK 470 LYS A 247 CE NZ REMARK 470 ARG A 250 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 280 CG CD CE NZ REMARK 470 LYS A 285 CD CE NZ REMARK 470 LYS A 286 CE NZ REMARK 470 LYS A 302 CG CD CE NZ REMARK 470 ARG B 83 NE CZ NH1 NH2 REMARK 470 GLN B 87 CD OE1 NE2 REMARK 470 GLN B 154 CG CD OE1 NE2 REMARK 470 TRP B 156 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP B 156 CZ3 CH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR A 61 O SER A 65 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 63 -116.75 56.12 REMARK 500 ASP A 109 17.15 57.90 REMARK 500 SER A 163 -70.16 -61.83 REMARK 500 LYS A 217 -112.33 58.49 REMARK 500 SER A 317 -159.29 -97.51 REMARK 500 ALA B 29 93.33 -68.00 REMARK 500 GLN B 157 44.08 -80.16 REMARK 500 LEU B 187 53.12 -97.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 TB A 401 TB REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 22 OE1 REMARK 620 2 GLU A 22 OE2 54.5 REMARK 620 3 GLU A 44 OE1 68.5 93.1 REMARK 620 4 GLU A 44 OE2 100.7 77.4 54.4 REMARK 620 5 GLU A 122 OE1 84.6 30.3 104.2 64.6 REMARK 620 6 GLU A 122 OE2 87.0 32.8 103.4 62.3 3.0 REMARK 620 7 HOH A 522 O 148.3 140.2 81.3 67.3 113.2 110.3 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8C7M RELATED DB: PDB REMARK 900 RELATED ID: 8CR6 RELATED DB: PDB REMARK 900 RELATED ID: 8CR5 RELATED DB: PDB DBREF 8CR8 A 23 328 UNP P29460 IL12B_HUMAN 23 328 DBREF 8CR8 B 22 189 UNP Q9NPF7 IL23A_HUMAN 22 189 SEQADV 8CR8 MET A 4 UNP P29460 INITIATING METHIONINE SEQADV 8CR8 GLY A 5 UNP P29460 EXPRESSION TAG SEQADV 8CR8 VAL A 6 UNP P29460 EXPRESSION TAG SEQADV 8CR8 LYS A 7 UNP P29460 EXPRESSION TAG SEQADV 8CR8 VAL A 8 UNP P29460 EXPRESSION TAG SEQADV 8CR8 LEU A 9 UNP P29460 EXPRESSION TAG SEQADV 8CR8 PHE A 10 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ALA A 11 UNP P29460 EXPRESSION TAG SEQADV 8CR8 LEU A 12 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ILE A 13 UNP P29460 EXPRESSION TAG SEQADV 8CR8 CYS A 14 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ILE A 15 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ALA A 16 UNP P29460 EXPRESSION TAG SEQADV 8CR8 VAL A 17 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ALA A 18 UNP P29460 EXPRESSION TAG SEQADV 8CR8 GLU A 19 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ALA A 20 UNP P29460 EXPRESSION TAG SEQADV 8CR8 LEU A 21 UNP P29460 EXPRESSION TAG SEQADV 8CR8 GLU A 22 UNP P29460 EXPRESSION TAG SEQADV 8CR8 ASP A 303 UNP P29460 ASN 303 ENGINEERED MUTATION SEQADV 8CR8 MET B 0 UNP Q9NPF7 INITIATING METHIONINE SEQADV 8CR8 GLY B 1 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 TRP B 2 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 SER B 3 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 CYS B 4 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 ILE B 5 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 ILE B 6 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 LEU B 7 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 PHE B 8 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 LEU B 9 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 VAL B 10 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 ALA B 11 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 THR B 12 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 ALA B 13 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 THR B 14 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 GLY B 15 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 VAL B 16 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 17 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 SER B 18 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 SER B 19 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 ARG B 20 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 ASN B 21 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 190 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 191 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 192 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 193 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 194 UNP Q9NPF7 EXPRESSION TAG SEQADV 8CR8 HIS B 195 UNP Q9NPF7 EXPRESSION TAG SEQRES 1 A 325 MET GLY VAL LYS VAL LEU PHE ALA LEU ILE CYS ILE ALA SEQRES 2 A 325 VAL ALA GLU ALA LEU GLU ILE TRP GLU LEU LYS LYS ASP SEQRES 3 A 325 VAL TYR VAL VAL GLU LEU ASP TRP TYR PRO ASP ALA PRO SEQRES 4 A 325 GLY GLU MET VAL VAL LEU THR CYS ASP THR PRO GLU GLU SEQRES 5 A 325 ASP GLY ILE THR TRP THR LEU ASP GLN SER SER GLU VAL SEQRES 6 A 325 LEU GLY SER GLY LYS THR LEU THR ILE GLN VAL LYS GLU SEQRES 7 A 325 PHE GLY ASP ALA GLY GLN TYR THR CYS HIS LYS GLY GLY SEQRES 8 A 325 GLU VAL LEU SER HIS SER LEU LEU LEU LEU HIS LYS LYS SEQRES 9 A 325 GLU ASP GLY ILE TRP SER THR ASP ILE LEU LYS ASP GLN SEQRES 10 A 325 LYS GLU PRO LYS ASN LYS THR PHE LEU ARG CYS GLU ALA SEQRES 11 A 325 LYS ASN TYR SER GLY ARG PHE THR CYS TRP TRP LEU THR SEQRES 12 A 325 THR ILE SER THR ASP LEU THR PHE SER VAL LYS SER SER SEQRES 13 A 325 ARG GLY SER SER ASP PRO GLN GLY VAL THR CYS GLY ALA SEQRES 14 A 325 ALA THR LEU SER ALA GLU ARG VAL ARG GLY ASP ASN LYS SEQRES 15 A 325 GLU TYR GLU TYR SER VAL GLU CYS GLN GLU ASP SER ALA SEQRES 16 A 325 CYS PRO ALA ALA GLU GLU SER LEU PRO ILE GLU VAL MET SEQRES 17 A 325 VAL ASP ALA VAL HIS LYS LEU LYS TYR GLU ASN TYR THR SEQRES 18 A 325 SER SER PHE PHE ILE ARG ASP ILE ILE LYS PRO ASP PRO SEQRES 19 A 325 PRO LYS ASN LEU GLN LEU LYS PRO LEU LYS ASN SER ARG SEQRES 20 A 325 GLN VAL GLU VAL SER TRP GLU TYR PRO ASP THR TRP SER SEQRES 21 A 325 THR PRO HIS SER TYR PHE SER LEU THR PHE CYS VAL GLN SEQRES 22 A 325 VAL GLN GLY LYS SER LYS ARG GLU LYS LYS ASP ARG VAL SEQRES 23 A 325 PHE THR ASP LYS THR SER ALA THR VAL ILE CYS ARG LYS SEQRES 24 A 325 ASP ALA SER ILE SER VAL ARG ALA GLN ASP ARG TYR TYR SEQRES 25 A 325 SER SER SER TRP SER GLU TRP ALA SER VAL PRO CYS SER SEQRES 1 B 196 MET GLY TRP SER CYS ILE ILE LEU PHE LEU VAL ALA THR SEQRES 2 B 196 ALA THR GLY VAL HIS SER SER ARG ASN VAL PRO GLY GLY SEQRES 3 B 196 SER SER PRO ALA TRP THR GLN CYS GLN GLN LEU SER GLN SEQRES 4 B 196 LYS LEU CYS THR LEU ALA TRP SER ALA HIS PRO LEU VAL SEQRES 5 B 196 GLY HIS MET ASP LEU ARG GLU GLU GLY ASP GLU GLU THR SEQRES 6 B 196 THR ASN ASP VAL PRO HIS ILE GLN CYS GLY ASP GLY CYS SEQRES 7 B 196 ASP PRO GLN GLY LEU ARG ASP ASN SER GLN PHE CYS LEU SEQRES 8 B 196 GLN ARG ILE HIS GLN GLY LEU ILE PHE TYR GLU LYS LEU SEQRES 9 B 196 LEU GLY SER ASP ILE PHE THR GLY GLU PRO SER LEU LEU SEQRES 10 B 196 PRO ASP SER PRO VAL GLY GLN LEU HIS ALA SER LEU LEU SEQRES 11 B 196 GLY LEU SER GLN LEU LEU GLN PRO GLU GLY HIS HIS TRP SEQRES 12 B 196 GLU THR GLN GLN ILE PRO SER LEU SER PRO SER GLN PRO SEQRES 13 B 196 TRP GLN ARG LEU LEU LEU ARG PHE LYS ILE LEU ARG SER SEQRES 14 B 196 LEU GLN ALA PHE VAL ALA VAL ALA ALA ARG VAL PHE ALA SEQRES 15 B 196 HIS GLY ALA ALA THR LEU SER PRO HIS HIS HIS HIS HIS SEQRES 16 B 196 HIS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET MAN C 5 11 HET MAN C 6 11 HET TB A 401 1 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM TB TERBIUM(III) ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN 3(C6 H12 O6) FORMUL 4 TB TB 3+ FORMUL 5 HOH *84(H2 O) HELIX 1 AA1 GLU A 81 ALA A 85 5 5 HELIX 2 AA2 PHE A 228 ILE A 233 5 6 HELIX 3 AA3 ALA B 29 HIS B 48 1 20 HELIX 4 AA4 GLN B 72 GLY B 76 5 5 HELIX 5 AA5 ASP B 78 ASN B 85 1 8 HELIX 6 AA6 SER B 86 GLY B 105 1 20 HELIX 7 AA7 SER B 106 GLY B 111 1 6 HELIX 8 AA8 PRO B 120 GLN B 136 1 17 HELIX 9 AA9 ARG B 158 LEU B 187 1 30 SHEET 1 AA1 5 ILE A 23 LYS A 27 0 SHEET 2 AA1 5 VAL A 30 ASP A 36 -1 O VAL A 30 N LYS A 27 SHEET 3 AA1 5 GLU A 95 GLU A 108 1 O LEU A 103 N VAL A 33 SHEET 4 AA1 5 GLY A 86 LYS A 92 -1 N TYR A 88 O SER A 100 SHEET 5 AA1 5 THR A 59 LEU A 62 -1 N THR A 59 O HIS A 91 SHEET 1 AA2 4 ILE A 23 LYS A 27 0 SHEET 2 AA2 4 VAL A 30 ASP A 36 -1 O VAL A 30 N LYS A 27 SHEET 3 AA2 4 GLU A 95 GLU A 108 1 O LEU A 103 N VAL A 33 SHEET 4 AA2 4 ILE A 111 TRP A 112 -1 O ILE A 111 N GLU A 108 SHEET 1 AA3 2 GLU A 44 VAL A 47 0 SHEET 2 AA3 2 THR A 76 VAL A 79 -1 O VAL A 79 N GLU A 44 SHEET 1 AA4 4 ARG A 130 GLU A 132 0 SHEET 2 AA4 4 ARG A 139 THR A 146 -1 O TRP A 143 N ARG A 130 SHEET 3 AA4 4 ASN A 184 GLU A 195 -1 O CYS A 193 N PHE A 140 SHEET 4 AA4 4 THR A 174 ARG A 181 -1 N ARG A 179 O GLU A 186 SHEET 1 AA5 7 ARG A 130 GLU A 132 0 SHEET 2 AA5 7 ARG A 139 THR A 146 -1 O TRP A 143 N ARG A 130 SHEET 3 AA5 7 ASN A 184 GLU A 195 -1 O CYS A 193 N PHE A 140 SHEET 4 AA5 7 GLN A 166 CYS A 170 -1 N THR A 169 O GLN A 194 SHEET 5 AA5 7 LEU A 152 ARG A 160 -1 N ARG A 160 O GLN A 166 SHEET 6 AA5 7 ILE A 208 HIS A 216 -1 O GLU A 209 N SER A 159 SHEET 7 AA5 7 LYS A 219 PHE A 227 -1 O PHE A 227 N ILE A 208 SHEET 1 AA6 3 LYS A 239 PRO A 245 0 SHEET 2 AA6 3 GLN A 251 GLU A 257 -1 O GLU A 253 N LYS A 244 SHEET 3 AA6 3 SER A 295 ILE A 299 -1 O ALA A 296 N VAL A 254 SHEET 1 AA7 4 LYS A 286 THR A 291 0 SHEET 2 AA7 4 LEU A 271 GLY A 279 -1 N VAL A 275 O VAL A 289 SHEET 3 AA7 4 ALA A 304 ASP A 312 -1 O SER A 305 N GLN A 278 SHEET 4 AA7 4 ALA A 323 PRO A 326 -1 O ALA A 323 N VAL A 308 SSBOND 1 CYS A 50 CYS A 90 1555 1555 2.03 SSBOND 2 CYS A 131 CYS A 142 1555 1555 2.04 SSBOND 3 CYS A 170 CYS A 193 1555 1555 2.04 SSBOND 4 CYS A 199 CYS B 73 1555 1555 2.03 SSBOND 5 CYS A 300 CYS A 327 1555 1555 2.03 SSBOND 6 CYS B 77 CYS B 89 1555 1555 2.03 LINK ND2 ASN A 222 C1 NAG C 1 1555 1555 1.44 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.45 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O6 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O3 BMA C 3 C1 MAN C 6 1555 1555 1.44 LINK O2 MAN C 4 C1 MAN C 5 1555 1555 1.44 LINK OE1 GLU A 22 TB TB A 401 1555 1555 2.42 LINK OE2 GLU A 22 TB TB A 401 1555 1555 2.38 LINK OE1 GLU A 44 TB TB A 401 1555 1555 2.39 LINK OE2 GLU A 44 TB TB A 401 1555 1555 2.41 LINK OE1 GLU A 122 TB TB A 401 1555 2555 2.41 LINK OE2 GLU A 122 TB TB A 401 1555 2555 2.40 LINK TB TB A 401 O HOH A 522 1555 1555 2.40 CISPEP 1 GLU A 122 PRO A 123 0 1.14 CISPEP 2 THR A 264 PRO A 265 0 0.38 CISPEP 3 GLU B 112 PRO B 113 0 -0.65 CRYST1 67.748 59.842 69.989 90.00 98.06 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014761 0.000000 0.002090 0.00000 SCALE2 0.000000 0.016711 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014431 0.00000