HEADER VIRAL PROTEIN 24-MAY-22 8CYU TITLE CRYSTAL STRUCTURE OF SARS-COV-2 MPRO WITH COMPOUND C5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3C-LIKE PROTEINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 3CL-PRO,3CLP,MAIN PROTEASE,MPRO,NON-STRUCTURAL PROTEIN 5, COMPND 5 NSP5,SARS CORONAVIRUS MAIN PROTEINASE; COMPND 6 EC: 3.4.22.69; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS COVID-19, SARS-COV-2, PROTEASE, INHIBITOR, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR L.J.WORRALL,J.LEE,N.C.J.STRYNADKA REVDAT 1 30-AUG-23 8CYU 0 JRNL AUTH J.PEREZ-VARGAS,L.J.WORRALL,A.D.OLMSTEAD,A.T.TON,J.LEE, JRNL AUTH 2 I.VILLANUEVA,C.A.H.THOMPSON,S.DUDEK,S.ENNIS,J.R.SMITH, JRNL AUTH 3 T.SHAPIRA,J.DE GUZMAN,S.GANG,F.BAN,M.VUCKOVIC,M.BIELECKI, JRNL AUTH 4 S.KOVACIC,C.KENWARD,C.Y.HONG,D.G.GORDON,P.N.LEVETT, JRNL AUTH 5 M.KRAJDEN,R.LEDUC,P.L.BOUDREAULT,M.NIIKURA,M.PAETZEL, JRNL AUTH 6 R.N.YOUNG,A.CHERKASOV,N.C.J.STRYNADKA,F.JEAN JRNL TITL A NOVEL CLASS OF BROAD-SPECTRUM ACTIVE-SITE-DIRECTED 3C-LIKE JRNL TITL 2 PROTEASE INHIBITORS WITH NANOMOLAR ANTIVIRAL ACTIVITY JRNL TITL 3 AGAINST HIGHLY IMMUNE-EVASIVE SARS-COV-2 OMICRON JRNL TITL 4 SUBVARIANTS. JRNL REF EMERG MICROBES INFECT V. 12 46594 2023 JRNL REFN ESSN 2222-1751 JRNL PMID 37555275 JRNL DOI 10.1080/22221751.2023.2246594 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 119897 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.214 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6360 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8787 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.3550 REMARK 3 BIN FREE R VALUE SET COUNT : 490 REMARK 3 BIN FREE R VALUE : 0.3700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9430 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 120 REMARK 3 SOLVENT ATOMS : 666 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.41000 REMARK 3 B22 (A**2) : -0.30000 REMARK 3 B33 (A**2) : -0.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.80000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.133 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.089 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 9872 ; 0.013 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 9092 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13448 ; 1.789 ; 1.658 REMARK 3 BOND ANGLES OTHERS (DEGREES): 20890 ; 1.479 ; 1.587 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1242 ; 7.481 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 476 ;36.369 ;23.277 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1550 ;15.486 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;19.597 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1272 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11460 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 2360 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 6 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 1 304 B 1 304 9876 0.080 0.050 REMARK 3 2 A 1 305 C 1 305 9932 0.080 0.050 REMARK 3 3 A 1 304 D 1 304 10048 0.060 0.050 REMARK 3 4 B 1 304 C 1 304 9975 0.060 0.050 REMARK 3 5 B 1 306 D 1 306 9977 0.070 0.050 REMARK 3 6 C 1 304 D 1 304 9873 0.080 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 43 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3120 -18.4340 42.6540 REMARK 3 T TENSOR REMARK 3 T11: 0.0449 T22: 0.0856 REMARK 3 T33: 0.2408 T12: -0.0073 REMARK 3 T13: -0.0923 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 4.5327 L22: 2.3073 REMARK 3 L33: 0.2876 L12: 1.3835 REMARK 3 L13: 0.2579 L23: -0.1018 REMARK 3 S TENSOR REMARK 3 S11: -0.0458 S12: 0.0430 S13: 0.0562 REMARK 3 S21: 0.0316 S22: 0.0635 S23: 0.1207 REMARK 3 S31: -0.0396 S32: 0.0004 S33: -0.0176 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 44 A 70 REMARK 3 ORIGIN FOR THE GROUP (A): -26.9650 -27.2240 47.7110 REMARK 3 T TENSOR REMARK 3 T11: 0.1052 T22: 0.1772 REMARK 3 T33: 0.3284 T12: -0.0256 REMARK 3 T13: -0.0630 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 2.5627 L22: 9.5375 REMARK 3 L33: 0.9668 L12: 1.6841 REMARK 3 L13: -1.1410 L23: -2.1736 REMARK 3 S TENSOR REMARK 3 S11: 0.0132 S12: -0.2130 S13: 0.2268 REMARK 3 S21: 0.5483 S22: -0.0179 S23: 0.1771 REMARK 3 S31: -0.2201 S32: 0.1073 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 71 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): -21.2880 -17.6060 36.9540 REMARK 3 T TENSOR REMARK 3 T11: 0.1014 T22: 0.2061 REMARK 3 T33: 0.4147 T12: 0.0110 REMARK 3 T13: -0.1748 T23: 0.0108 REMARK 3 L TENSOR REMARK 3 L11: 3.8483 L22: 5.1631 REMARK 3 L33: 1.8295 L12: 0.8574 REMARK 3 L13: -0.0791 L23: -3.0141 REMARK 3 S TENSOR REMARK 3 S11: -0.0244 S12: 0.2075 S13: 0.3269 REMARK 3 S21: 0.1074 S22: 0.2381 S23: 0.5451 REMARK 3 S31: -0.1083 S32: -0.1538 S33: -0.2137 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 139 REMARK 3 ORIGIN FOR THE GROUP (A): -2.4450 -24.9870 42.9090 REMARK 3 T TENSOR REMARK 3 T11: 0.0337 T22: 0.1164 REMARK 3 T33: 0.2989 T12: -0.0089 REMARK 3 T13: -0.0709 T23: 0.0187 REMARK 3 L TENSOR REMARK 3 L11: 3.2056 L22: 2.2872 REMARK 3 L33: 0.2114 L12: 0.1499 REMARK 3 L13: 0.6165 L23: -0.3591 REMARK 3 S TENSOR REMARK 3 S11: 0.0038 S12: 0.1826 S13: -0.2181 REMARK 3 S21: -0.0528 S22: 0.0193 S23: -0.1366 REMARK 3 S31: 0.0185 S32: 0.0800 S33: -0.0231 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 140 A 155 REMARK 3 ORIGIN FOR THE GROUP (A): -4.9690 -19.8240 42.5950 REMARK 3 T TENSOR REMARK 3 T11: 0.0409 T22: 0.0563 REMARK 3 T33: 0.3032 T12: -0.0081 REMARK 3 T13: -0.0932 T23: 0.0419 REMARK 3 L TENSOR REMARK 3 L11: 3.7483 L22: 3.7347 REMARK 3 L33: 1.7085 L12: 0.5124 REMARK 3 L13: 0.9489 L23: 0.3918 REMARK 3 S TENSOR REMARK 3 S11: 0.0168 S12: 0.1547 S13: 0.0056 REMARK 3 S21: -0.1556 S22: -0.0619 S23: -0.1229 REMARK 3 S31: 0.0228 S32: 0.0740 S33: 0.0451 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 156 A 274 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9270 -34.5170 43.5940 REMARK 3 T TENSOR REMARK 3 T11: 0.0399 T22: 0.0774 REMARK 3 T33: 0.2951 T12: -0.0205 REMARK 3 T13: -0.1040 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 3.2423 L22: 1.0635 REMARK 3 L33: 0.1239 L12: -1.4729 REMARK 3 L13: 0.2126 L23: 0.1082 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: 0.0653 S13: -0.0836 REMARK 3 S21: 0.0054 S22: -0.0024 S23: 0.0745 REMARK 3 S31: 0.0111 S32: 0.0025 S33: -0.0005 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 275 A 305 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5590 -24.0760 44.0450 REMARK 3 T TENSOR REMARK 3 T11: 0.1216 T22: 0.1350 REMARK 3 T33: 0.5586 T12: 0.0290 REMARK 3 T13: -0.0427 T23: 0.0369 REMARK 3 L TENSOR REMARK 3 L11: 0.2651 L22: 3.7398 REMARK 3 L33: 2.9466 L12: -0.1499 REMARK 3 L13: 0.1352 L23: 0.2801 REMARK 3 S TENSOR REMARK 3 S11: -0.0268 S12: 0.1258 S13: 0.0982 REMARK 3 S21: 0.2067 S22: 0.1649 S23: 0.0689 REMARK 3 S31: -0.5204 S32: -0.0331 S33: -0.1380 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 43 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1370 -1.7540 39.7650 REMARK 3 T TENSOR REMARK 3 T11: 0.0785 T22: 0.0808 REMARK 3 T33: 0.1688 T12: -0.0034 REMARK 3 T13: -0.0926 T23: 0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.8526 L22: 4.7320 REMARK 3 L33: 1.4078 L12: 1.5949 REMARK 3 L13: -0.1287 L23: -1.2581 REMARK 3 S TENSOR REMARK 3 S11: -0.1511 S12: 0.1525 S13: -0.0654 REMARK 3 S21: -0.3544 S22: 0.0946 S23: 0.0847 REMARK 3 S31: 0.0450 S32: -0.0053 S33: 0.0566 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 44 B 62 REMARK 3 ORIGIN FOR THE GROUP (A): 26.3930 10.1960 34.1090 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.2675 REMARK 3 T33: 0.3313 T12: -0.0538 REMARK 3 T13: 0.0255 T23: 0.0625 REMARK 3 L TENSOR REMARK 3 L11: 5.8846 L22: 9.6295 REMARK 3 L33: 6.0022 L12: -3.5791 REMARK 3 L13: 1.8257 L23: -3.9441 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: 0.5193 S13: 0.3656 REMARK 3 S21: -0.4565 S22: -0.0434 S23: -0.3537 REMARK 3 S31: -0.1452 S32: 0.6504 S33: 0.1216 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 63 B 110 REMARK 3 ORIGIN FOR THE GROUP (A): 7.5060 7.0730 38.0530 REMARK 3 T TENSOR REMARK 3 T11: 0.1282 T22: 0.0805 REMARK 3 T33: 0.2670 T12: -0.0185 REMARK 3 T13: -0.1322 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 3.2504 L22: 3.2030 REMARK 3 L33: 2.2946 L12: 0.1884 REMARK 3 L13: 1.1347 L23: -0.5504 REMARK 3 S TENSOR REMARK 3 S11: -0.1626 S12: 0.3437 S13: 0.2386 REMARK 3 S21: -0.5294 S22: 0.1342 S23: 0.2460 REMARK 3 S31: -0.0539 S32: -0.0461 S33: 0.0284 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 111 B 180 REMARK 3 ORIGIN FOR THE GROUP (A): 12.6720 -5.1600 46.4700 REMARK 3 T TENSOR REMARK 3 T11: 0.0374 T22: 0.0570 REMARK 3 T33: 0.1833 T12: -0.0054 REMARK 3 T13: -0.0696 T23: 0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.1311 L22: 3.4638 REMARK 3 L33: 2.0823 L12: 0.5286 REMARK 3 L13: 0.9331 L23: -0.2350 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.0604 S13: -0.1439 REMARK 3 S21: -0.0564 S22: 0.0630 S23: 0.0021 REMARK 3 S31: 0.1293 S32: -0.0781 S33: -0.0671 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 181 B 274 REMARK 3 ORIGIN FOR THE GROUP (A): 13.4290 -12.9840 68.3210 REMARK 3 T TENSOR REMARK 3 T11: 0.1373 T22: 0.2770 REMARK 3 T33: 0.2901 T12: -0.0294 REMARK 3 T13: -0.0956 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 3.0252 L22: 3.1913 REMARK 3 L33: 2.9199 L12: 2.0192 REMARK 3 L13: -1.5667 L23: -2.1193 REMARK 3 S TENSOR REMARK 3 S11: 0.2256 S12: -0.8045 S13: -0.0901 REMARK 3 S21: 0.4054 S22: -0.3119 S23: -0.1029 REMARK 3 S31: 0.0316 S32: 0.2438 S33: 0.0862 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 275 B 305 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3460 -18.1750 60.7360 REMARK 3 T TENSOR REMARK 3 T11: 0.1457 T22: 0.2103 REMARK 3 T33: 0.3600 T12: -0.0591 REMARK 3 T13: -0.0132 T23: 0.0359 REMARK 3 L TENSOR REMARK 3 L11: 6.4484 L22: 2.3233 REMARK 3 L33: 2.3320 L12: -0.2100 REMARK 3 L13: 0.1784 L23: 0.9175 REMARK 3 S TENSOR REMARK 3 S11: -0.2134 S12: 0.1906 S13: -0.7566 REMARK 3 S21: -0.0885 S22: 0.1341 S23: 0.2235 REMARK 3 S31: 0.1663 S32: -0.1284 S33: 0.0792 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 42 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8970 -24.8810 10.3560 REMARK 3 T TENSOR REMARK 3 T11: 0.0653 T22: 0.1328 REMARK 3 T33: 0.2025 T12: 0.0206 REMARK 3 T13: -0.1004 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.7729 L22: 3.9733 REMARK 3 L33: 1.5456 L12: -1.6445 REMARK 3 L13: -0.2114 L23: 1.4701 REMARK 3 S TENSOR REMARK 3 S11: -0.0880 S12: -0.2066 S13: 0.0265 REMARK 3 S21: 0.2035 S22: 0.0868 S23: -0.1946 REMARK 3 S31: 0.0644 S32: 0.0069 S33: 0.0011 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 43 C 91 REMARK 3 ORIGIN FOR THE GROUP (A): 8.0670 -12.6590 17.1610 REMARK 3 T TENSOR REMARK 3 T11: 0.1780 T22: 0.2144 REMARK 3 T33: 0.2935 T12: 0.0477 REMARK 3 T13: -0.0945 T23: -0.0713 REMARK 3 L TENSOR REMARK 3 L11: 3.3849 L22: 2.1455 REMARK 3 L33: 3.4228 L12: -0.2348 REMARK 3 L13: 0.4899 L23: 0.6627 REMARK 3 S TENSOR REMARK 3 S11: -0.1637 S12: -0.5338 S13: 0.3026 REMARK 3 S21: 0.4852 S22: 0.1120 S23: 0.0433 REMARK 3 S31: -0.1688 S32: -0.1408 S33: 0.0518 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 92 C 200 REMARK 3 ORIGIN FOR THE GROUP (A): 11.5070 -25.9150 2.9530 REMARK 3 T TENSOR REMARK 3 T11: 0.0350 T22: 0.0727 REMARK 3 T33: 0.2317 T12: 0.0084 REMARK 3 T13: -0.0825 T23: -0.0211 REMARK 3 L TENSOR REMARK 3 L11: 2.5731 L22: 2.6824 REMARK 3 L33: 1.9293 L12: -0.2620 REMARK 3 L13: 0.7593 L23: 0.5030 REMARK 3 S TENSOR REMARK 3 S11: -0.0596 S12: -0.0155 S13: -0.0431 REMARK 3 S21: 0.0471 S22: 0.0745 S23: -0.0355 REMARK 3 S31: 0.0595 S32: 0.0420 S33: -0.0150 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 201 C 226 REMARK 3 ORIGIN FOR THE GROUP (A): 16.3950 -44.4550 -19.8420 REMARK 3 T TENSOR REMARK 3 T11: 0.5685 T22: 0.5083 REMARK 3 T33: 0.3725 T12: 0.2202 REMARK 3 T13: -0.1964 T23: -0.2013 REMARK 3 L TENSOR REMARK 3 L11: 4.4075 L22: 2.9121 REMARK 3 L33: 6.5561 L12: -1.6161 REMARK 3 L13: 0.3658 L23: -2.9631 REMARK 3 S TENSOR REMARK 3 S11: 0.5222 S12: 1.0076 S13: -0.8515 REMARK 3 S21: -1.1489 S22: -0.3981 S23: 0.2639 REMARK 3 S31: 1.6501 S32: 0.8221 S33: -0.1240 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 227 C 305 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1040 -39.0460 -17.4950 REMARK 3 T TENSOR REMARK 3 T11: 0.2412 T22: 0.2712 REMARK 3 T33: 0.2592 T12: 0.0989 REMARK 3 T13: -0.0977 T23: -0.0579 REMARK 3 L TENSOR REMARK 3 L11: 4.9047 L22: 4.2715 REMARK 3 L33: 5.8430 L12: -0.9940 REMARK 3 L13: 1.8983 L23: -1.5632 REMARK 3 S TENSOR REMARK 3 S11: 0.4175 S12: 0.5589 S13: -0.2591 REMARK 3 S21: -0.6019 S22: -0.2451 S23: 0.0405 REMARK 3 S31: 0.6824 S32: 0.4061 S33: -0.1724 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 100 REMARK 3 ORIGIN FOR THE GROUP (A): 42.1880 -43.7730 8.7900 REMARK 3 T TENSOR REMARK 3 T11: 0.0720 T22: 0.1440 REMARK 3 T33: 0.3323 T12: -0.0166 REMARK 3 T13: -0.1034 T23: -0.0031 REMARK 3 L TENSOR REMARK 3 L11: 3.9275 L22: 2.1859 REMARK 3 L33: 0.3920 L12: -1.9424 REMARK 3 L13: 0.0237 L23: 0.0883 REMARK 3 S TENSOR REMARK 3 S11: -0.0308 S12: -0.1568 S13: 0.3276 REMARK 3 S21: -0.0377 S22: 0.0523 S23: -0.3351 REMARK 3 S31: -0.1038 S32: 0.0686 S33: -0.0216 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 101 D 200 REMARK 3 ORIGIN FOR THE GROUP (A): 29.1980 -50.7860 6.0040 REMARK 3 T TENSOR REMARK 3 T11: 0.0337 T22: 0.1255 REMARK 3 T33: 0.2826 T12: -0.0040 REMARK 3 T13: -0.0942 T23: 0.0104 REMARK 3 L TENSOR REMARK 3 L11: 3.9327 L22: 3.2123 REMARK 3 L33: 0.4740 L12: -0.0518 REMARK 3 L13: 0.3659 L23: -0.4252 REMARK 3 S TENSOR REMARK 3 S11: 0.0104 S12: -0.1228 S13: -0.1530 REMARK 3 S21: -0.0765 S22: -0.0044 S23: 0.0148 REMARK 3 S31: 0.0168 S32: -0.0731 S33: -0.0061 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 201 D 226 REMARK 3 ORIGIN FOR THE GROUP (A): 0.5050 -54.1770 8.2310 REMARK 3 T TENSOR REMARK 3 T11: 0.0367 T22: 0.0942 REMARK 3 T33: 0.3020 T12: -0.0034 REMARK 3 T13: -0.0817 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 3.0172 L22: 2.1383 REMARK 3 L33: 0.9284 L12: 0.8106 REMARK 3 L13: 0.2897 L23: -0.1801 REMARK 3 S TENSOR REMARK 3 S11: 0.0102 S12: -0.0224 S13: 0.3489 REMARK 3 S21: 0.0439 S22: -0.0282 S23: 0.1216 REMARK 3 S31: -0.0876 S32: -0.0840 S33: 0.0179 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 227 D 305 REMARK 3 ORIGIN FOR THE GROUP (A): 6.4330 -55.9030 8.7060 REMARK 3 T TENSOR REMARK 3 T11: 0.0335 T22: 0.1313 REMARK 3 T33: 0.3000 T12: -0.0116 REMARK 3 T13: -0.0810 T23: 0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.5966 L22: 3.5571 REMARK 3 L33: 1.9157 L12: 1.0611 REMARK 3 L13: 0.0033 L23: 0.5324 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: -0.1083 S13: 0.1619 REMARK 3 S21: 0.0995 S22: 0.0201 S23: -0.0844 REMARK 3 S31: -0.1100 S32: 0.0667 S33: -0.0366 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 8CYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265736. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1806 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 126257 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 45.750 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.13200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 2.14600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 7JOY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS PH 8, 15 % PEG 8000, 10 % REMARK 280 ETHYLENE GLYCOL, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 51.32000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24600 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24700 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 306 REMARK 465 GLN C 306 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 76 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 306 CG CD OE1 NE2 REMARK 470 ARG D 76 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 306 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 515 O HOH D 618 1.47 REMARK 500 N GLN A 256 OD1 ASN C 72 1.94 REMARK 500 OH TYR C 237 O HOH C 501 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH D 602 O HOH D 647 1655 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 178 CD GLU A 178 OE1 -0.085 REMARK 500 GLU B 55 CD GLU B 55 OE1 0.077 REMARK 500 GLU B 288 CD GLU B 288 OE2 0.068 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 33 -131.73 54.03 REMARK 500 ASN A 51 65.65 -152.31 REMARK 500 ASN A 84 -122.62 51.50 REMARK 500 TYR A 154 -97.33 54.91 REMARK 500 ASP B 33 -132.68 53.30 REMARK 500 ASN B 51 68.85 -162.65 REMARK 500 ASN B 84 -124.93 54.71 REMARK 500 TYR B 154 -100.38 58.06 REMARK 500 ASP B 187 59.86 -92.26 REMARK 500 ASP C 33 -132.44 55.98 REMARK 500 ASN C 51 64.95 -161.76 REMARK 500 ASN C 84 -123.82 53.98 REMARK 500 TYR C 154 -101.42 57.78 REMARK 500 ASP D 33 -130.78 54.07 REMARK 500 ASN D 51 63.76 -151.68 REMARK 500 ASN D 84 -121.34 52.31 REMARK 500 TYR D 154 -104.86 61.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 679 DISTANCE = 6.08 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8CYP RELATED DB: PDB REMARK 900 SAME PUBLICATION REMARK 900 RELATED ID: 8CYQ RELATED DB: PDB REMARK 900 SAME PUBLICATION DBREF 8CYU A 1 306 UNP P0DTD1 R1AB_SARS2 3264 3569 DBREF 8CYU B 1 306 UNP P0DTD1 R1AB_SARS2 3264 3569 DBREF 8CYU C 1 306 UNP P0DTD1 R1AB_SARS2 3264 3569 DBREF 8CYU D 1 306 UNP P0DTD1 R1AB_SARS2 3264 3569 SEQRES 1 A 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 A 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 A 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 A 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 A 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 A 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 A 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 A 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 A 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 A 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 A 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 A 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 A 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 A 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 A 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 A 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 A 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 A 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 A 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 A 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 A 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 A 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 A 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 A 306 CYS SER GLY VAL THR PHE GLN SEQRES 1 B 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 B 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 B 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 B 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 B 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 B 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 B 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 B 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 B 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 B 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 B 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 B 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 B 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 B 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 B 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 B 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 B 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 B 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 B 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 B 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 B 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 B 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 B 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 B 306 CYS SER GLY VAL THR PHE GLN SEQRES 1 C 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 C 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 C 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 C 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 C 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 C 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 C 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 C 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 C 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 C 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 C 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 C 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 C 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 C 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 C 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 C 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 C 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 C 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 C 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 C 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 C 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 C 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 C 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 C 306 CYS SER GLY VAL THR PHE GLN SEQRES 1 D 306 SER GLY PHE ARG LYS MET ALA PHE PRO SER GLY LYS VAL SEQRES 2 D 306 GLU GLY CYS MET VAL GLN VAL THR CYS GLY THR THR THR SEQRES 3 D 306 LEU ASN GLY LEU TRP LEU ASP ASP VAL VAL TYR CYS PRO SEQRES 4 D 306 ARG HIS VAL ILE CYS THR SER GLU ASP MET LEU ASN PRO SEQRES 5 D 306 ASN TYR GLU ASP LEU LEU ILE ARG LYS SER ASN HIS ASN SEQRES 6 D 306 PHE LEU VAL GLN ALA GLY ASN VAL GLN LEU ARG VAL ILE SEQRES 7 D 306 GLY HIS SER MET GLN ASN CYS VAL LEU LYS LEU LYS VAL SEQRES 8 D 306 ASP THR ALA ASN PRO LYS THR PRO LYS TYR LYS PHE VAL SEQRES 9 D 306 ARG ILE GLN PRO GLY GLN THR PHE SER VAL LEU ALA CYS SEQRES 10 D 306 TYR ASN GLY SER PRO SER GLY VAL TYR GLN CYS ALA MET SEQRES 11 D 306 ARG PRO ASN PHE THR ILE LYS GLY SER PHE LEU ASN GLY SEQRES 12 D 306 SER CYS GLY SER VAL GLY PHE ASN ILE ASP TYR ASP CYS SEQRES 13 D 306 VAL SER PHE CYS TYR MET HIS HIS MET GLU LEU PRO THR SEQRES 14 D 306 GLY VAL HIS ALA GLY THR ASP LEU GLU GLY ASN PHE TYR SEQRES 15 D 306 GLY PRO PHE VAL ASP ARG GLN THR ALA GLN ALA ALA GLY SEQRES 16 D 306 THR ASP THR THR ILE THR VAL ASN VAL LEU ALA TRP LEU SEQRES 17 D 306 TYR ALA ALA VAL ILE ASN GLY ASP ARG TRP PHE LEU ASN SEQRES 18 D 306 ARG PHE THR THR THR LEU ASN ASP PHE ASN LEU VAL ALA SEQRES 19 D 306 MET LYS TYR ASN TYR GLU PRO LEU THR GLN ASP HIS VAL SEQRES 20 D 306 ASP ILE LEU GLY PRO LEU SER ALA GLN THR GLY ILE ALA SEQRES 21 D 306 VAL LEU ASP MET CYS ALA SER LEU LYS GLU LEU LEU GLN SEQRES 22 D 306 ASN GLY MET ASN GLY ARG THR ILE LEU GLY SER ALA LEU SEQRES 23 D 306 LEU GLU ASP GLU PHE THR PRO PHE ASP VAL VAL ARG GLN SEQRES 24 D 306 CYS SER GLY VAL THR PHE GLN HET P5X A 401 30 HET P5X B 401 30 HET P5X C 401 30 HET P5X D 401 30 HETNAM P5X N-[(4-CHLOROTHIOPHEN-2-YL)METHYL]-N-[4-(DIMETHYLAMINO) HETNAM 2 P5X PHENYL]-2-(ISOQUINOLIN-4-YL)ACETAMIDE FORMUL 5 P5X 4(C24 H22 CL N3 O S) FORMUL 9 HOH *666(H2 O) HELIX 1 AA1 SER A 10 GLY A 15 1 6 HELIX 2 AA2 HIS A 41 CYS A 44 5 4 HELIX 3 AA3 SER A 46 ASN A 51 5 6 HELIX 4 AA4 ASN A 53 ARG A 60 1 8 HELIX 5 AA5 SER A 62 HIS A 64 5 3 HELIX 6 AA6 ILE A 200 ASN A 214 1 15 HELIX 7 AA7 THR A 226 LYS A 236 1 11 HELIX 8 AA8 THR A 243 LEU A 250 1 8 HELIX 9 AA9 LEU A 250 GLY A 258 1 9 HELIX 10 AB1 ALA A 260 GLY A 275 1 16 HELIX 11 AB2 THR A 292 GLY A 302 1 11 HELIX 12 AB3 SER B 10 GLY B 15 1 6 HELIX 13 AB4 HIS B 41 CYS B 44 5 4 HELIX 14 AB5 THR B 45 LEU B 50 1 6 HELIX 15 AB6 ASN B 53 ARG B 60 1 8 HELIX 16 AB7 SER B 62 HIS B 64 5 3 HELIX 17 AB8 ILE B 200 ASN B 214 1 15 HELIX 18 AB9 THR B 226 TYR B 237 1 12 HELIX 19 AC1 THR B 243 LEU B 250 1 8 HELIX 20 AC2 LEU B 250 GLY B 258 1 9 HELIX 21 AC3 ALA B 260 GLY B 275 1 16 HELIX 22 AC4 THR B 292 GLY B 302 1 11 HELIX 23 AC5 SER C 10 GLY C 15 1 6 HELIX 24 AC6 HIS C 41 CYS C 44 5 4 HELIX 25 AC7 THR C 45 LEU C 50 1 6 HELIX 26 AC8 ASN C 53 ARG C 60 1 8 HELIX 27 AC9 SER C 62 HIS C 64 5 3 HELIX 28 AD1 ILE C 200 ASN C 214 1 15 HELIX 29 AD2 THR C 226 MET C 235 1 10 HELIX 30 AD3 LYS C 236 ASN C 238 5 3 HELIX 31 AD4 THR C 243 LEU C 250 1 8 HELIX 32 AD5 LEU C 250 GLY C 258 1 9 HELIX 33 AD6 ALA C 260 GLY C 275 1 16 HELIX 34 AD7 THR C 292 GLY C 302 1 11 HELIX 35 AD8 SER D 10 GLY D 15 1 6 HELIX 36 AD9 HIS D 41 CYS D 44 5 4 HELIX 37 AE1 SER D 46 ASN D 51 5 6 HELIX 38 AE2 ASN D 53 ARG D 60 1 8 HELIX 39 AE3 SER D 62 HIS D 64 5 3 HELIX 40 AE4 ILE D 200 ASN D 214 1 15 HELIX 41 AE5 THR D 226 LYS D 236 1 11 HELIX 42 AE6 THR D 243 LEU D 250 1 8 HELIX 43 AE7 LEU D 250 GLY D 258 1 9 HELIX 44 AE8 ALA D 260 GLY D 275 1 16 HELIX 45 AE9 THR D 292 GLY D 302 1 11 SHEET 1 AA1 7 VAL A 73 LEU A 75 0 SHEET 2 AA1 7 PHE A 66 ALA A 70 -1 N ALA A 70 O VAL A 73 SHEET 3 AA1 7 MET A 17 CYS A 22 -1 N GLN A 19 O GLN A 69 SHEET 4 AA1 7 THR A 25 LEU A 32 -1 O LEU A 27 N VAL A 20 SHEET 5 AA1 7 VAL A 35 PRO A 39 -1 O TYR A 37 N LEU A 30 SHEET 6 AA1 7 VAL A 86 VAL A 91 -1 O LEU A 89 N VAL A 36 SHEET 7 AA1 7 VAL A 77 GLN A 83 -1 N SER A 81 O LYS A 88 SHEET 1 AA2 5 LYS A 100 PHE A 103 0 SHEET 2 AA2 5 CYS A 156 GLU A 166 1 O VAL A 157 N LYS A 100 SHEET 3 AA2 5 VAL A 148 ASP A 153 -1 N ASN A 151 O SER A 158 SHEET 4 AA2 5 THR A 111 TYR A 118 -1 N SER A 113 O PHE A 150 SHEET 5 AA2 5 SER A 121 ALA A 129 -1 O SER A 123 N ALA A 116 SHEET 1 AA3 3 LYS A 100 PHE A 103 0 SHEET 2 AA3 3 CYS A 156 GLU A 166 1 O VAL A 157 N LYS A 100 SHEET 3 AA3 3 HIS A 172 THR A 175 -1 O ALA A 173 N MET A 165 SHEET 1 AA4 7 VAL B 73 LEU B 75 0 SHEET 2 AA4 7 PHE B 66 ALA B 70 -1 N ALA B 70 O VAL B 73 SHEET 3 AA4 7 MET B 17 CYS B 22 -1 N GLN B 19 O GLN B 69 SHEET 4 AA4 7 THR B 25 LEU B 32 -1 O LEU B 27 N VAL B 20 SHEET 5 AA4 7 VAL B 35 PRO B 39 -1 O TYR B 37 N LEU B 30 SHEET 6 AA4 7 VAL B 86 VAL B 91 -1 O LEU B 89 N VAL B 36 SHEET 7 AA4 7 VAL B 77 GLN B 83 -1 N SER B 81 O LYS B 88 SHEET 1 AA5 5 LYS B 100 PHE B 103 0 SHEET 2 AA5 5 CYS B 156 GLU B 166 1 O VAL B 157 N LYS B 100 SHEET 3 AA5 5 VAL B 148 ASP B 153 -1 N ASN B 151 O SER B 158 SHEET 4 AA5 5 THR B 111 TYR B 118 -1 N SER B 113 O PHE B 150 SHEET 5 AA5 5 SER B 121 ALA B 129 -1 O SER B 123 N ALA B 116 SHEET 1 AA6 3 LYS B 100 PHE B 103 0 SHEET 2 AA6 3 CYS B 156 GLU B 166 1 O VAL B 157 N LYS B 100 SHEET 3 AA6 3 HIS B 172 THR B 175 -1 O ALA B 173 N MET B 165 SHEET 1 AA7 7 VAL C 73 LEU C 75 0 SHEET 2 AA7 7 PHE C 66 ALA C 70 -1 N ALA C 70 O VAL C 73 SHEET 3 AA7 7 MET C 17 CYS C 22 -1 N THR C 21 O LEU C 67 SHEET 4 AA7 7 THR C 25 LEU C 32 -1 O LEU C 27 N VAL C 20 SHEET 5 AA7 7 VAL C 35 PRO C 39 -1 O TYR C 37 N LEU C 30 SHEET 6 AA7 7 VAL C 86 VAL C 91 -1 O LEU C 89 N VAL C 36 SHEET 7 AA7 7 VAL C 77 GLN C 83 -1 N SER C 81 O LYS C 88 SHEET 1 AA8 5 LYS C 100 PHE C 103 0 SHEET 2 AA8 5 CYS C 156 GLU C 166 1 O VAL C 157 N LYS C 100 SHEET 3 AA8 5 VAL C 148 ASP C 153 -1 N ASN C 151 O SER C 158 SHEET 4 AA8 5 THR C 111 TYR C 118 -1 N SER C 113 O PHE C 150 SHEET 5 AA8 5 SER C 121 ALA C 129 -1 O SER C 123 N ALA C 116 SHEET 1 AA9 3 LYS C 100 PHE C 103 0 SHEET 2 AA9 3 CYS C 156 GLU C 166 1 O VAL C 157 N LYS C 100 SHEET 3 AA9 3 HIS C 172 THR C 175 -1 O ALA C 173 N MET C 165 SHEET 1 AB1 7 VAL D 73 LEU D 75 0 SHEET 2 AB1 7 PHE D 66 ALA D 70 -1 N ALA D 70 O VAL D 73 SHEET 3 AB1 7 MET D 17 CYS D 22 -1 N GLN D 19 O GLN D 69 SHEET 4 AB1 7 THR D 25 LEU D 32 -1 O LEU D 27 N VAL D 20 SHEET 5 AB1 7 VAL D 35 PRO D 39 -1 O TYR D 37 N LEU D 30 SHEET 6 AB1 7 VAL D 86 VAL D 91 -1 O LEU D 89 N VAL D 36 SHEET 7 AB1 7 VAL D 77 GLN D 83 -1 N SER D 81 O LYS D 88 SHEET 1 AB2 5 LYS D 100 PHE D 103 0 SHEET 2 AB2 5 CYS D 156 GLU D 166 1 O VAL D 157 N LYS D 100 SHEET 3 AB2 5 VAL D 148 ASP D 153 -1 N ASN D 151 O SER D 158 SHEET 4 AB2 5 THR D 111 TYR D 118 -1 N SER D 113 O PHE D 150 SHEET 5 AB2 5 SER D 121 ALA D 129 -1 O SER D 123 N ALA D 116 SHEET 1 AB3 3 LYS D 100 PHE D 103 0 SHEET 2 AB3 3 CYS D 156 GLU D 166 1 O VAL D 157 N LYS D 100 SHEET 3 AB3 3 HIS D 172 THR D 175 -1 O ALA D 173 N MET D 165 CRYST1 67.290 102.640 102.200 90.00 100.25 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014861 0.000000 0.002688 0.00000 SCALE2 0.000000 0.009743 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009944 0.00000