HEADER OXIDOREDUCTASE 26-MAY-22 8D12 TITLE CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH 1-METHYL-1H-PYRAZOL-4- TITLE 2 AMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN DSBA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DSBA, DSF, PPFA, B3860, JW3832; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: B0013 KEYWDS DISULFIDE OXIDOREDUCTASE, REDOX PROTEIN, MICROFRAG SCREENING, FBDD, KEYWDS 2 FRAGMENT, ANTIMICROBIAL PROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.L.WHITEHOUSE,O.V.ILYICHOVA,A.J.TAYLOR REVDAT 3 25-OCT-23 8D12 1 REMARK REVDAT 2 22-FEB-23 8D12 1 JRNL REVDAT 1 07-DEC-22 8D12 0 JRNL AUTH R.L.WHITEHOUSE,W.S.ALWAN,O.V.ILYICHOVA,A.J.TAYLOR, JRNL AUTH 2 I.R.CHANDRASHEKARAN,B.MOHANTY,B.C.DOAK,M.J.SCANLON JRNL TITL FRAGMENT SCREENING LIBRARIES FOR THE IDENTIFICATION OF JRNL TITL 2 PROTEIN HOT SPOTS AND THEIR MINIMAL BINDING PHARMACOPHORES. JRNL REF RSC MED CHEM V. 14 135 2023 JRNL REFN ESSN 2632-8682 JRNL PMID 36760747 JRNL DOI 10.1039/D2MD00253A REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.390 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 57992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.300 REMARK 3 FREE R VALUE TEST SET COUNT : 752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.3600 - 2.7400 0.99 11744 160 0.1738 0.1759 REMARK 3 2 2.7400 - 2.1700 0.99 11501 153 0.1965 0.2350 REMARK 3 3 2.1700 - 1.9000 0.98 11399 143 0.1931 0.2128 REMARK 3 4 1.9000 - 1.7200 0.98 11377 138 0.1919 0.2307 REMARK 3 5 1.7200 - 1.6000 0.97 11219 158 0.1882 0.2152 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.107 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.935 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3095 REMARK 3 ANGLE : 0.945 4225 REMARK 3 CHIRALITY : 0.055 458 REMARK 3 PLANARITY : 0.007 582 REMARK 3 DIHEDRAL : 4.502 437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4374 -2.7441 1.2746 REMARK 3 T TENSOR REMARK 3 T11: 0.2023 T22: 0.1913 REMARK 3 T33: 0.1842 T12: -0.0332 REMARK 3 T13: 0.0235 T23: -0.0266 REMARK 3 L TENSOR REMARK 3 L11: 0.4578 L22: 2.5351 REMARK 3 L33: 1.3773 L12: 0.5446 REMARK 3 L13: 0.8443 L23: 1.6290 REMARK 3 S TENSOR REMARK 3 S11: 0.0058 S12: 0.1403 S13: -0.1153 REMARK 3 S21: -0.2151 S22: 0.1045 S23: -0.0991 REMARK 3 S31: -0.0033 S32: 0.0489 S33: -0.0678 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8353 1.4756 9.2750 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.1228 REMARK 3 T33: 0.1271 T12: -0.0078 REMARK 3 T13: 0.0108 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 1.2208 L22: 1.3262 REMARK 3 L33: 0.8969 L12: 0.6700 REMARK 3 L13: 0.5634 L23: 0.5722 REMARK 3 S TENSOR REMARK 3 S11: -0.0304 S12: 0.0972 S13: -0.0772 REMARK 3 S21: -0.0620 S22: 0.0507 S23: -0.0585 REMARK 3 S31: -0.0043 S32: 0.0612 S33: -0.0230 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1574 7.3068 20.0214 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.1792 REMARK 3 T33: 0.1894 T12: 0.0150 REMARK 3 T13: -0.0196 T23: -0.0249 REMARK 3 L TENSOR REMARK 3 L11: 1.0715 L22: 1.3591 REMARK 3 L33: 1.4989 L12: -0.0229 REMARK 3 L13: 0.1325 L23: 0.2054 REMARK 3 S TENSOR REMARK 3 S11: -0.0513 S12: -0.1125 S13: 0.1421 REMARK 3 S21: -0.0273 S22: -0.0040 S23: 0.1245 REMARK 3 S31: -0.2680 S32: -0.1898 S33: 0.0446 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5667 1.7272 30.3643 REMARK 3 T TENSOR REMARK 3 T11: 0.2174 T22: 0.2085 REMARK 3 T33: 0.2284 T12: -0.0135 REMARK 3 T13: 0.0385 T23: -0.0118 REMARK 3 L TENSOR REMARK 3 L11: 3.4912 L22: 1.4274 REMARK 3 L33: 1.4213 L12: -1.2118 REMARK 3 L13: -0.6662 L23: 0.5276 REMARK 3 S TENSOR REMARK 3 S11: -0.1732 S12: -0.1498 S13: -0.2598 REMARK 3 S21: 0.3018 S22: 0.0833 S23: 0.2565 REMARK 3 S31: 0.2296 S32: -0.1767 S33: 0.1078 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1897 -6.7938 16.4094 REMARK 3 T TENSOR REMARK 3 T11: 0.1686 T22: 0.1750 REMARK 3 T33: 0.1607 T12: -0.0175 REMARK 3 T13: -0.0035 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.7508 L22: 1.8423 REMARK 3 L33: 1.0503 L12: 0.2726 REMARK 3 L13: 0.6864 L23: 0.3363 REMARK 3 S TENSOR REMARK 3 S11: 0.0556 S12: -0.0832 S13: 0.1071 REMARK 3 S21: 0.0169 S22: -0.0767 S23: 0.1440 REMARK 3 S31: 0.0734 S32: -0.0650 S33: 0.0235 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 98 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.6170 -18.1430 14.2246 REMARK 3 T TENSOR REMARK 3 T11: 0.1685 T22: 0.1664 REMARK 3 T33: 0.2250 T12: 0.0117 REMARK 3 T13: 0.0132 T23: -0.0050 REMARK 3 L TENSOR REMARK 3 L11: 1.9348 L22: 0.9882 REMARK 3 L33: 0.8694 L12: 0.5973 REMARK 3 L13: -1.0035 L23: -0.7699 REMARK 3 S TENSOR REMARK 3 S11: -0.1251 S12: 0.0647 S13: -0.4339 REMARK 3 S21: 0.0409 S22: 0.0050 S23: -0.2914 REMARK 3 S31: -0.0096 S32: -0.0530 S33: 0.0756 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 128 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3772 -20.9583 12.6557 REMARK 3 T TENSOR REMARK 3 T11: 0.1527 T22: 0.2037 REMARK 3 T33: 0.2026 T12: -0.0284 REMARK 3 T13: 0.0082 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 1.7840 L22: 0.9255 REMARK 3 L33: 1.8725 L12: -0.1903 REMARK 3 L13: 1.3159 L23: 0.1737 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: -0.0382 S13: -0.3145 REMARK 3 S21: -0.1143 S22: 0.0773 S23: 0.0375 REMARK 3 S31: 0.1212 S32: -0.1649 S33: -0.0883 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 129 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.7537 -3.4813 8.0287 REMARK 3 T TENSOR REMARK 3 T11: 0.2256 T22: 0.2326 REMARK 3 T33: 0.2379 T12: 0.0081 REMARK 3 T13: -0.0798 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 1.1736 L22: 3.1506 REMARK 3 L33: 0.5745 L12: 1.1210 REMARK 3 L13: 0.0276 L23: -0.2191 REMARK 3 S TENSOR REMARK 3 S11: -0.1515 S12: 0.0265 S13: 0.2108 REMARK 3 S21: -0.3223 S22: 0.1203 S23: 0.5239 REMARK 3 S31: -0.1344 S32: -0.2265 S33: 0.0735 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 145 THROUGH 161 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.1598 9.7987 15.5958 REMARK 3 T TENSOR REMARK 3 T11: 0.2496 T22: 0.2281 REMARK 3 T33: 0.2451 T12: 0.0291 REMARK 3 T13: -0.0444 T23: 0.0101 REMARK 3 L TENSOR REMARK 3 L11: 2.4480 L22: 2.7497 REMARK 3 L33: 2.6050 L12: -1.0623 REMARK 3 L13: -0.4410 L23: 1.0377 REMARK 3 S TENSOR REMARK 3 S11: -0.0044 S12: -0.0565 S13: 0.1738 REMARK 3 S21: -0.3542 S22: -0.0621 S23: 0.3916 REMARK 3 S31: -0.5949 S32: -0.3754 S33: 0.0488 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 162 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0893 12.0680 28.4862 REMARK 3 T TENSOR REMARK 3 T11: 0.2252 T22: 0.1860 REMARK 3 T33: 0.1911 T12: 0.0102 REMARK 3 T13: 0.0102 T23: -0.0495 REMARK 3 L TENSOR REMARK 3 L11: 1.7000 L22: 1.7560 REMARK 3 L33: 2.7579 L12: -0.0441 REMARK 3 L13: 0.4506 L23: -0.1801 REMARK 3 S TENSOR REMARK 3 S11: -0.1237 S12: -0.1705 S13: 0.2555 REMARK 3 S21: 0.0543 S22: 0.0029 S23: 0.0432 REMARK 3 S31: -0.4193 S32: -0.0676 S33: 0.1062 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 1 through 2 or REMARK 3 resid 4 through 23 or resid 25 through 36 REMARK 3 or resid 39 through 43 or resid 45 REMARK 3 through 46 or (resid 47 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG or name CD or name CE )) or resid REMARK 3 48 through 54 or (resid 55 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG )) or resid 56 through 66 or REMARK 3 resid 68 through 69 or (resid 70 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB or name CG )) or resid 71 through REMARK 3 105 or resid 107 through 113 or resid 115 REMARK 3 through 117 or (resid 118 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG or name CD )) or resid 119 or REMARK 3 resid 121 through 132 or resid 134 REMARK 3 through 136 or resid 138 through 161 or REMARK 3 resid 163 or (resid 164 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 165 through 185 or resid 187 REMARK 3 through 188 or resid 303)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 1 through 2 or REMARK 3 resid 4 through 23 or resid 25 through 36 REMARK 3 or resid 39 through 43 or resid 45 REMARK 3 through 47 or (resid 48 and (name N or REMARK 3 name CA or name C or name O or name CB or REMARK 3 name CG or name CD )) or resid 49 through REMARK 3 66 or resid 68 through 102 or (resid 103 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB or name CG or name CD or REMARK 3 name NE )) or resid 104 through 105 or REMARK 3 resid 107 through 113 or resid 115 REMARK 3 through 119 or resid 121 through 132 or REMARK 3 resid 134 through 136 or resid 138 REMARK 3 through 145 or (resid 146 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 147 or (resid 148 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 149 through 157 or (resid 158 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 159 through 161 REMARK 3 or resid 163 through 185 or resid 187 REMARK 3 through 188 or resid 202)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8D12 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000265833. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95365 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73888 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 48.960 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.04900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.79300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1FVK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-13 % PEG 8000, 5-7.5% GLYCEROL, REMARK 280 100MM NA CACODYLATE PH6.1, 1MM CUCL2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 57.88850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.36250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 57.88850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.36250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 189 REMARK 465 LYS B 189 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CD CE NZ REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 LYS A 48 CE NZ REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 LYS A 55 NZ REMARK 470 ARG A 103 CZ NH1 NH2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 GLN A 164 CD OE1 NE2 REMARK 470 LYS B 7 CD CE NZ REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 LYS B 47 NZ REMARK 470 GLU B 52 CG CD OE1 OE2 REMARK 470 LYS B 55 CD CE NZ REMARK 470 LYS B 70 CD CE NZ REMARK 470 LYS B 118 CE NZ REMARK 470 ARG B 148 CD NE CZ NH1 NH2 REMARK 470 GLN B 164 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 30 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 MET A 171 CG - SD - CE ANGL. DEV. = -11.5 DEGREES REMARK 500 CYS B 30 CA - CB - SG ANGL. DEV. = 7.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 7 -84.05 -108.20 REMARK 500 LYS A 98 -64.91 -95.78 REMARK 500 LYS B 7 -80.30 -105.14 REMARK 500 LYS B 98 -69.40 -100.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 201 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 1 N REMARK 620 2 ALA B 1 O 85.0 REMARK 620 3 HIS B 41 NE2 98.6 13.6 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 8CXD RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH PHENYLMETHANOL REMARK 900 RELATED ID: 8CXE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH 1H-IMIDAZOLE REMARK 900 RELATED ID: 8CZM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH 4-BROMO-1H-PYRAZOLE REMARK 900 RELATED ID: 8CZN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH 1H-PYRROLE-3- REMARK 900 CARBOXYLIC ACID REMARK 900 RELATED ID: 8D10 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH (1-METHYL-1H-PYRAZOL- REMARK 900 5-YL)METHANAMINE REMARK 900 RELATED ID: 8D11 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH 1-METHYL-1H-PYRAZOL-5- REMARK 900 AMINE DBREF 8D12 A 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 DBREF 8D12 B 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 SEQRES 1 A 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU SEQRES 2 A 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE SEQRES 3 A 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL SEQRES 4 A 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU SEQRES 5 A 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY SEQRES 6 A 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL SEQRES 7 A 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO SEQRES 8 A 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER SEQRES 9 A 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE SEQRES 10 A 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL SEQRES 11 A 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA SEQRES 12 A 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN SEQRES 13 A 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER SEQRES 14 A 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL SEQRES 15 A 189 LYS TYR LEU SER GLU LYS LYS SEQRES 1 B 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU SEQRES 2 B 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE SEQRES 3 B 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL SEQRES 4 B 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU SEQRES 5 B 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY SEQRES 6 B 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL SEQRES 7 B 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO SEQRES 8 B 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER SEQRES 9 B 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE SEQRES 10 B 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL SEQRES 11 B 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA SEQRES 12 B 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN SEQRES 13 B 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER SEQRES 14 B 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL SEQRES 15 B 189 LYS TYR LEU SER GLU LYS LYS HET Q3F A 201 7 HET Q3F A 202 7 HET CU B 201 1 HET Q3F B 202 7 HETNAM Q3F 1-METHYL-1H-PYRAZOL-4-AMINE HETNAM CU COPPER (II) ION FORMUL 3 Q3F 3(C4 H7 N3) FORMUL 5 CU CU 2+ FORMUL 7 HOH *294(H2 O) HELIX 1 AA1 CYS A 30 VAL A 39 1 10 HELIX 2 AA2 HIS A 41 LEU A 50 1 10 HELIX 3 AA3 GLY A 65 GLY A 83 1 19 HELIX 4 AA4 VAL A 84 LYS A 98 1 15 HELIX 5 AA5 SER A 104 ALA A 115 1 12 HELIX 6 AA6 LYS A 118 ASN A 127 1 10 HELIX 7 AA7 SER A 128 VAL A 145 1 18 HELIX 8 AA8 PRO A 163 MET A 166 5 4 HELIX 9 AA9 ASN A 170 GLU A 187 1 18 HELIX 10 AB1 CYS B 30 VAL B 39 1 10 HELIX 11 AB2 HIS B 41 LEU B 50 1 10 HELIX 12 AB3 GLY B 65 GLY B 83 1 19 HELIX 13 AB4 VAL B 84 LYS B 98 1 15 HELIX 14 AB5 SER B 104 ALA B 115 1 12 HELIX 15 AB6 LYS B 118 ASN B 127 1 10 HELIX 16 AB7 SER B 128 VAL B 145 1 18 HELIX 17 AB8 PRO B 163 MET B 166 5 4 HELIX 18 AB9 ASN B 170 GLU B 187 1 18 SHEET 1 AA1 5 TYR A 9 THR A 11 0 SHEET 2 AA1 5 TYR A 159 LEU A 161 -1 O GLN A 160 N THR A 10 SHEET 3 AA1 5 ALA A 152 VAL A 155 -1 N VAL A 155 O TYR A 159 SHEET 4 AA1 5 VAL A 22 PHE A 26 -1 N LEU A 23 O PHE A 154 SHEET 5 AA1 5 MET A 56 HIS A 60 1 O TYR A 59 N GLU A 24 SHEET 1 AA2 5 TYR B 9 THR B 11 0 SHEET 2 AA2 5 TYR B 159 LEU B 161 -1 O GLN B 160 N THR B 10 SHEET 3 AA2 5 ALA B 152 VAL B 155 -1 N MET B 153 O LEU B 161 SHEET 4 AA2 5 VAL B 22 PHE B 26 -1 N LEU B 23 O PHE B 154 SHEET 5 AA2 5 MET B 56 HIS B 60 1 O THR B 57 N VAL B 22 SSBOND 1 CYS A 30 CYS A 33 1555 1555 2.09 SSBOND 2 CYS B 30 CYS B 33 1555 1555 2.11 LINK N ALA B 1 CU CU B 201 1555 1555 2.16 LINK O ALA B 1 CU CU B 201 1555 1555 1.98 LINK NE2 HIS B 41 CU CU B 201 1555 4546 2.05 CISPEP 1 VAL A 150 PRO A 151 0 -7.07 CISPEP 2 VAL B 150 PRO B 151 0 -6.43 CRYST1 115.777 64.725 75.052 90.00 126.21 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008637 0.000000 0.006323 0.00000 SCALE2 0.000000 0.015450 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016513 0.00000 MTRIX1 1 -0.953353 0.086835 0.289098 32.87292 1 MTRIX2 1 -0.295625 -0.074970 -0.952358 14.76284 1 MTRIX3 1 -0.061025 -0.993398 0.097143 19.91867 1