HEADER TRANSFERASE 27-MAY-22 8D1U TITLE E. COLI BETA-KETOACYL-[ACYL CARRIER PROTEIN] SYNTHASE III (FABH) WITH TITLE 2 AN ACETYLATED CYSTEINE AND IN COMPLEX WITH OXA(DETHIA)-COENZYME A COMPND MOL_ID: 1; COMPND 2 MOLECULE: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III,BETA-KETOACYL- COMPND 5 ACP SYNTHASE III,KAS III,ECFABH; COMPND 6 EC: 2.3.1.180; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: FABH; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS KETOACYL SYNTHASE, SUBSTRATE ANALOG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.B.BENJAMIN,L.M.STUNKARD,J.LING,J.N.NICE,J.R.LOHMAN REVDAT 4 25-OCT-23 8D1U 1 REMARK REVDAT 3 15-MAR-23 8D1U 1 JRNL REVDAT 2 08-MAR-23 8D1U 1 JRNL REVDAT 1 15-JUN-22 8D1U 0 SPRSDE 15-JUN-22 8D1U 6X7S JRNL AUTH A.B.BENJAMIN,L.M.STUNKARD,J.LING,J.N.NICE,J.R.LOHMAN JRNL TITL STRUCTURES OF CHLORAMPHENICOL ACETYLTRANSFERASE III AND JRNL TITL 2 ESCHERICHIA COLI BETA-KETOACYLSYNTHASE III CO-CRYSTALLIZED JRNL TITL 3 WITH PARTIALLY HYDROLYSED ACETYL-OXA(DETHIA)COA. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 79 61 2023 JRNL REFN ESSN 2053-230X JRNL PMID 36862094 JRNL DOI 10.1107/S2053230X23001206 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0258 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 67957 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.143 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.071 REMARK 3 FREE R VALUE TEST SET COUNT : 3446 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.34 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4684 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2060 REMARK 3 BIN FREE R VALUE SET COUNT : 248 REMARK 3 BIN FREE R VALUE : 0.2180 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2358 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 49 REMARK 3 SOLVENT ATOMS : 506 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.74 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.61900 REMARK 3 B22 (A**2) : -0.61900 REMARK 3 B33 (A**2) : 1.23700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.046 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.029 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.667 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.979 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2636 ; 0.015 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 2481 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3634 ; 2.088 ; 1.691 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5759 ; 1.550 ; 1.603 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 359 ; 6.456 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;34.389 ;21.901 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 425 ;11.639 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.449 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 373 ; 0.101 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2983 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 541 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 517 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 79 ; 0.222 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1221 ; 0.170 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 337 ; 0.295 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1315 ; 1.248 ; 1.253 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1314 ; 1.239 ; 1.252 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1653 ; 1.787 ; 1.884 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1654 ; 1.790 ; 1.884 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1321 ; 2.275 ; 1.560 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1322 ; 2.274 ; 1.560 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1959 ; 3.311 ; 2.257 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1960 ; 3.310 ; 2.257 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK BULK SOLVENT REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THEIR REMARK 3 RIDING POSITIONS REMARK 4 REMARK 4 8D1U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 31-MAY-22. REMARK 100 THE DEPOSITION ID IS D_1000265855. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-19 REMARK 200 TEMPERATURE (KELVIN) : 298 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : M REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68034 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.302 REMARK 200 RESOLUTION RANGE LOW (A) : 22.992 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.05000 REMARK 200 FOR THE DATA SET : 113.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.54400 REMARK 200 R SYM FOR SHELL (I) : 0.45400 REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1HNJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.02 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 75 MM MAGNESIUM CHLORIDE, 20% PEG REMARK 280 6000, 3% PEG 400, PH 7, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.42600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.33100 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.33100 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.71300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.33100 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.33100 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 77.13900 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.33100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.33100 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.71300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.33100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.33100 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 77.13900 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.42600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 72.66200 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 72.66200 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 51.42600 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 777 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 841 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 505 O HOH A 542 1.36 REMARK 500 O HOH A 802 O HOH A 853 1.39 REMARK 500 O HOH A 540 O HOH A 773 1.50 REMARK 500 O HOH A 646 O HOH A 739 1.52 REMARK 500 O HOH A 837 O HOH A 993 1.59 REMARK 500 O HOH A 648 O HOH A 776 1.70 REMARK 500 O HOH A 814 O HOH A 873 1.73 REMARK 500 O HOH A 530 O HOH A 826 1.78 REMARK 500 O HOH A 541 O HOH A 787 1.82 REMARK 500 O HOH A 808 O HOH A 835 1.84 REMARK 500 NH2 ARG A 196 O HOH A 502 1.90 REMARK 500 O HOH A 750 O HOH A 770 1.93 REMARK 500 O HOH A 903 O HOH A 936 1.94 REMARK 500 O HOH A 636 O HOH A 756 1.98 REMARK 500 O HOH A 850 O HOH A 874 2.00 REMARK 500 O HOH A 840 O HOH A 971 2.01 REMARK 500 OE2 GLU A 211 O HOH A 503 2.01 REMARK 500 O HOH A 697 O HOH A 953 2.03 REMARK 500 O HOH A 836 O HOH A 848 2.05 REMARK 500 O HOH A 763 O HOH A 912 2.08 REMARK 500 O HOH A 571 O HOH A 912 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 577 O HOH A 808 6555 1.48 REMARK 500 O HOH A 750 O HOH A 750 8665 1.50 REMARK 500 O HOH A 867 O HOH A 897 8665 1.52 REMARK 500 O HOH A 962 O HOH A 973 8655 1.90 REMARK 500 O HOH A 912 O HOH A 924 4554 2.04 REMARK 500 O HOH A 502 O HOH A 680 8665 2.05 REMARK 500 O HOH A 768 O HOH A 953 5545 2.12 REMARK 500 O HOH A 504 O HOH A 756 5555 2.12 REMARK 500 O HOH A 617 O HOH A 909 8665 2.14 REMARK 500 O HOH A 912 O HOH A 984 5545 2.16 REMARK 500 O HOH A 555 O HOH A 971 8665 2.17 REMARK 500 O PRO A 192 O HOH A 502 8665 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 271 NE - CZ - NH2 ANGL. DEV. = -4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 82 30.37 -144.89 REMARK 500 ALA A 110 38.68 -148.09 REMARK 500 ALA A 111 -136.50 47.86 REMARK 500 GLN A 245 76.85 -100.25 REMARK 500 SER A 276 -128.60 56.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1006 DISTANCE = 5.97 ANGSTROMS DBREF 8D1U A 1 317 UNP P0A6R0 FABH_ECOLI 1 317 SEQADV 8D1U SER A -2 UNP P0A6R0 EXPRESSION TAG SEQADV 8D1U GLY A -1 UNP P0A6R0 EXPRESSION TAG SEQADV 8D1U GLY A 0 UNP P0A6R0 EXPRESSION TAG SEQRES 1 A 320 SER GLY GLY MET TYR THR LYS ILE ILE GLY THR GLY SER SEQRES 2 A 320 TYR LEU PRO GLU GLN VAL ARG THR ASN ALA ASP LEU GLU SEQRES 3 A 320 LYS MET VAL ASP THR SER ASP GLU TRP ILE VAL THR ARG SEQRES 4 A 320 THR GLY ILE ARG GLU ARG HIS ILE ALA ALA PRO ASN GLU SEQRES 5 A 320 THR VAL SER THR MET GLY PHE GLU ALA ALA THR ARG ALA SEQRES 6 A 320 ILE GLU MET ALA GLY ILE GLU LYS ASP GLN ILE GLY LEU SEQRES 7 A 320 ILE VAL VAL ALA THR THR SER ALA THR HIS ALA PHE PRO SEQRES 8 A 320 SER ALA ALA CYS GLN ILE GLN SER MET LEU GLY ILE LYS SEQRES 9 A 320 GLY CYS PRO ALA PHE ASP VAL ALA ALA ALA SCY ALA GLY SEQRES 10 A 320 PHE THR TYR ALA LEU SER VAL ALA ASP GLN TYR VAL LYS SEQRES 11 A 320 SER GLY ALA VAL LYS TYR ALA LEU VAL VAL GLY SER ASP SEQRES 12 A 320 VAL LEU ALA ARG THR CYS ASP PRO THR ASP ARG GLY THR SEQRES 13 A 320 ILE ILE ILE PHE GLY ASP GLY ALA GLY ALA ALA VAL LEU SEQRES 14 A 320 ALA ALA SER GLU GLU PRO GLY ILE ILE SER THR HIS LEU SEQRES 15 A 320 HIS ALA ASP GLY SER TYR GLY GLU LEU LEU THR LEU PRO SEQRES 16 A 320 ASN ALA ASP ARG VAL ASN PRO GLU ASN SER ILE HIS LEU SEQRES 17 A 320 THR MET ALA GLY ASN GLU VAL PHE LYS VAL ALA VAL THR SEQRES 18 A 320 GLU LEU ALA HIS ILE VAL ASP GLU THR LEU ALA ALA ASN SEQRES 19 A 320 ASN LEU ASP ARG SER GLN LEU ASP TRP LEU VAL PRO HIS SEQRES 20 A 320 GLN ALA ASN LEU ARG ILE ILE SER ALA THR ALA LYS LYS SEQRES 21 A 320 LEU GLY MET SER MET ASP ASN VAL VAL VAL THR LEU ASP SEQRES 22 A 320 ARG HIS GLY ASN THR SER ALA ALA SER VAL PRO CYS ALA SEQRES 23 A 320 LEU ASP GLU ALA VAL ARG ASP GLY ARG ILE LYS PRO GLY SEQRES 24 A 320 GLN LEU VAL LEU LEU GLU ALA PHE GLY GLY GLY PHE THR SEQRES 25 A 320 TRP GLY SER ALA LEU VAL ARG PHE MODRES 8D1U SCY A 112 CYS MODIFIED RESIDUE HET SCY A 112 9 HET UT7 A 401 96 HET CL A 402 1 HETNAM SCY S-ACETYL-CYSTEINE HETNAM UT7 OXA(DETHIA)-COA HETNAM CL CHLORIDE ION HETSYN UT7 [(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3- HETSYN 2 UT7 (PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-3- HETSYN 3 UT7 HYDROXY-4-({3-[(2-HYDROXYETHYL)AMINO]-3- HETSYN 4 UT7 OXOPROPYL}AMINO)-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN HETSYN 5 UT7 DIPHOSPHATE FORMUL 1 SCY C5 H9 N O3 S FORMUL 2 UT7 C21 H36 N7 O17 P3 FORMUL 3 CL CL 1- FORMUL 4 HOH *506(H2 O) HELIX 1 AA1 ASN A 19 LYS A 24 1 6 HELIX 2 AA2 SER A 29 GLY A 38 1 10 HELIX 3 AA3 THR A 50 GLY A 67 1 18 HELIX 4 AA4 GLU A 69 ILE A 73 5 5 HELIX 5 AA5 SER A 89 GLY A 99 1 11 HELIX 6 AA6 ALA A 110 SCY A 112 5 3 HELIX 7 AA7 ALA A 113 SER A 128 1 16 HELIX 8 AA8 VAL A 141 CYS A 146 1 6 HELIX 9 AA9 ASP A 150 ILE A 155 1 6 HELIX 10 AB1 GLY A 183 GLU A 187 5 5 HELIX 11 AB2 ALA A 208 ASN A 231 1 24 HELIX 12 AB3 ASP A 234 LEU A 238 5 5 HELIX 13 AB4 ASN A 247 LEU A 258 1 12 HELIX 14 AB5 SER A 261 VAL A 265 5 5 HELIX 15 AB6 THR A 268 GLY A 273 1 6 HELIX 16 AB7 THR A 275 ALA A 277 5 3 HELIX 17 AB8 ALA A 278 ASP A 290 1 13 SHEET 1 AA1 5 TYR A 2 TYR A 11 0 SHEET 2 AA1 5 GLY A 160 SER A 169 -1 O ALA A 161 N TYR A 11 SHEET 3 AA1 5 TYR A 133 ASP A 140 -1 N ALA A 134 O LEU A 166 SHEET 4 AA1 5 LEU A 75 ALA A 79 1 N ALA A 79 O VAL A 137 SHEET 5 AA1 5 ALA A 105 VAL A 108 1 O VAL A 108 N VAL A 78 SHEET 1 AA2 2 GLN A 15 THR A 18 0 SHEET 2 AA2 2 GLU A 41 ILE A 44 -1 O ARG A 42 N ARG A 17 SHEET 1 AA3 4 ILE A 174 ALA A 181 0 SHEET 2 AA3 4 THR A 309 ARG A 316 -1 O TRP A 310 N HIS A 180 SHEET 3 AA3 4 LEU A 298 GLY A 305 -1 N VAL A 299 O VAL A 315 SHEET 4 AA3 4 TRP A 240 PRO A 243 1 N VAL A 242 O LEU A 300 SHEET 1 AA4 2 LEU A 189 THR A 190 0 SHEET 2 AA4 2 THR A 206 MET A 207 -1 O THR A 206 N THR A 190 LINK C ALA A 111 N SCY A 112 1555 1555 1.34 LINK C SCY A 112 N ALA A 113 1555 1555 1.32 CISPEP 1 PHE A 87 PRO A 88 0 -6.71 CISPEP 2 PRO A 172 GLY A 173 0 -4.48 CISPEP 3 GLY A 307 PHE A 308 0 -4.10 CRYST1 72.662 72.662 102.852 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013762 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013762 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009723 0.00000