HEADER HYDROLASE 31-MAY-22 8D2Z TITLE CRYSTAL STRUCTURE OF A METALLO-BETA-LACTAMASE SUPERFAMILY PROTEIN FROM TITLE 2 BURKHOLDERIA CENOCEPACIA COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLO-BETA-LACTAMASE SUPERFAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BUCEA.12746.A.B1; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA CENOCEPACIA; SOURCE 3 ORGANISM_TAXID: 95486; SOURCE 4 STRAIN: ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / SOURCE 5 CF5610; SOURCE 6 GENE: BCAM1430; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: BUCEA.12746.A.B1 KEYWDS SSGCID, BURKHOLDERIA CENOCEPACIA, METALLO-BETA-LACTAMASE SUPERFAMILY KEYWDS 2 PROTEIN, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE,SEATTLE AUTHOR 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 2 03-APR-24 8D2Z 1 REMARK REVDAT 1 05-JUL-23 8D2Z 0 JRNL AUTH J.ABENDROTH,D.M.DRANOW,D.D.LORIMER,P.S.HORANYI,T.E.EDWARDS JRNL TITL CRYSTAL STRUCTURE OF A METALLO-BETA-LACTAMASE SUPERFAMILY JRNL TITL 2 PROTEIN FROM BURKHOLDERIA CENOCEPACIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 54842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2082 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.4400 - 4.5600 1.00 3748 151 0.1450 0.1513 REMARK 3 2 4.5600 - 3.6200 1.00 3598 135 0.1270 0.1657 REMARK 3 3 3.6200 - 3.1600 1.00 3562 136 0.1361 0.1582 REMARK 3 4 3.1600 - 2.8700 1.00 3541 139 0.1595 0.1936 REMARK 3 5 2.8700 - 2.6700 1.00 3528 127 0.1632 0.2055 REMARK 3 6 2.6700 - 2.5100 1.00 3510 145 0.1689 0.2166 REMARK 3 7 2.5100 - 2.3900 1.00 3484 154 0.1614 0.1918 REMARK 3 8 2.3800 - 2.2800 1.00 3500 135 0.1592 0.2110 REMARK 3 9 2.2800 - 2.1900 1.00 3476 134 0.1537 0.1899 REMARK 3 10 2.1900 - 2.1200 1.00 3499 137 0.1539 0.2078 REMARK 3 11 2.1200 - 2.0500 1.00 3478 134 0.1604 0.1709 REMARK 3 12 2.0500 - 1.9900 1.00 3468 146 0.1677 0.2305 REMARK 3 13 1.9900 - 1.9400 1.00 3440 140 0.1891 0.2314 REMARK 3 14 1.9400 - 1.8900 1.00 3499 136 0.1934 0.2215 REMARK 3 15 1.8900 - 1.8500 0.99 3429 133 0.2082 0.2425 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.168 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4917 REMARK 3 ANGLE : 0.950 6705 REMARK 3 CHIRALITY : 0.058 758 REMARK 3 PLANARITY : 0.008 864 REMARK 3 DIHEDRAL : 11.967 1774 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 14 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.3339 21.9991 26.8190 REMARK 3 T TENSOR REMARK 3 T11: 0.2230 T22: 0.1974 REMARK 3 T33: 0.2111 T12: -0.0291 REMARK 3 T13: 0.0310 T23: -0.0472 REMARK 3 L TENSOR REMARK 3 L11: 2.2534 L22: 1.4264 REMARK 3 L33: 3.5686 L12: -0.6037 REMARK 3 L13: -0.9714 L23: -1.1490 REMARK 3 S TENSOR REMARK 3 S11: -0.0416 S12: 0.1744 S13: -0.0884 REMARK 3 S21: -0.2569 S22: -0.0614 S23: -0.0361 REMARK 3 S31: 0.1522 S32: 0.0779 S33: 0.1067 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5570 18.2403 39.7272 REMARK 3 T TENSOR REMARK 3 T11: 0.1393 T22: 0.1777 REMARK 3 T33: 0.1798 T12: 0.0072 REMARK 3 T13: 0.0078 T23: 0.0274 REMARK 3 L TENSOR REMARK 3 L11: 2.7795 L22: 2.1444 REMARK 3 L33: 1.8642 L12: 0.9346 REMARK 3 L13: -0.5685 L23: 0.1066 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: -0.1566 S13: -0.3860 REMARK 3 S21: -0.0152 S22: 0.0022 S23: -0.0241 REMARK 3 S31: 0.1986 S32: 0.0777 S33: 0.0911 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 153 THROUGH 275 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0512 27.5936 29.7693 REMARK 3 T TENSOR REMARK 3 T11: 0.2152 T22: 0.1935 REMARK 3 T33: 0.1971 T12: -0.0024 REMARK 3 T13: -0.0085 T23: -0.0165 REMARK 3 L TENSOR REMARK 3 L11: 4.1910 L22: 1.5938 REMARK 3 L33: 0.6525 L12: 1.7179 REMARK 3 L13: -0.0254 L23: -0.1054 REMARK 3 S TENSOR REMARK 3 S11: -0.0924 S12: 0.1646 S13: 0.1737 REMARK 3 S21: -0.1406 S22: 0.0941 S23: 0.2018 REMARK 3 S31: -0.0841 S32: -0.1317 S33: -0.0005 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 276 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.5788 13.1169 35.7594 REMARK 3 T TENSOR REMARK 3 T11: 0.1967 T22: 0.2263 REMARK 3 T33: 0.2107 T12: -0.0539 REMARK 3 T13: -0.0182 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.8637 L22: 2.2177 REMARK 3 L33: 4.3833 L12: -0.3749 REMARK 3 L13: -0.3544 L23: -2.1078 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: -0.1260 S13: -0.0817 REMARK 3 S21: -0.1117 S22: 0.0783 S23: 0.1841 REMARK 3 S31: 0.4876 S32: -0.1197 S33: -0.0945 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 15 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2021 -11.5512 4.4152 REMARK 3 T TENSOR REMARK 3 T11: 0.1789 T22: 0.2239 REMARK 3 T33: 0.2965 T12: -0.0192 REMARK 3 T13: -0.0844 T23: -0.0138 REMARK 3 L TENSOR REMARK 3 L11: 2.8246 L22: 2.0631 REMARK 3 L33: 4.3427 L12: 0.7372 REMARK 3 L13: -1.6930 L23: 1.1112 REMARK 3 S TENSOR REMARK 3 S11: -0.0629 S12: 0.1122 S13: -0.0111 REMARK 3 S21: -0.3820 S22: -0.0530 S23: 0.5635 REMARK 3 S31: 0.0752 S32: -0.4919 S33: 0.0708 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 152 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5001 -0.3559 14.0387 REMARK 3 T TENSOR REMARK 3 T11: 0.1628 T22: 0.1885 REMARK 3 T33: 0.1564 T12: 0.0250 REMARK 3 T13: -0.0091 T23: 0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.4907 L22: 3.9147 REMARK 3 L33: 1.8130 L12: -0.4528 REMARK 3 L13: -0.1457 L23: 0.4663 REMARK 3 S TENSOR REMARK 3 S11: -0.0274 S12: -0.0275 S13: 0.0852 REMARK 3 S21: -0.0372 S22: -0.0031 S23: 0.4126 REMARK 3 S31: -0.1455 S32: -0.1889 S33: 0.0192 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 153 THROUGH 255 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0346 0.3840 -1.3626 REMARK 3 T TENSOR REMARK 3 T11: 0.1886 T22: 0.2112 REMARK 3 T33: 0.1395 T12: -0.0211 REMARK 3 T13: -0.0175 T23: -0.0066 REMARK 3 L TENSOR REMARK 3 L11: 0.8930 L22: 3.1172 REMARK 3 L33: 1.0427 L12: 0.3053 REMARK 3 L13: -0.1537 L23: 0.0723 REMARK 3 S TENSOR REMARK 3 S11: -0.0556 S12: 0.1026 S13: 0.0351 REMARK 3 S21: -0.1896 S22: 0.0243 S23: 0.0185 REMARK 3 S31: -0.1062 S32: 0.1179 S33: 0.0280 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 256 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7592 19.7388 0.2953 REMARK 3 T TENSOR REMARK 3 T11: 0.4104 T22: 0.2411 REMARK 3 T33: 0.2641 T12: -0.0262 REMARK 3 T13: -0.0216 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 1.2745 L22: 1.4011 REMARK 3 L33: 4.6892 L12: -0.5495 REMARK 3 L13: -0.4948 L23: 0.0519 REMARK 3 S TENSOR REMARK 3 S11: 0.0513 S12: 0.0583 S13: 0.2843 REMARK 3 S21: -0.1650 S22: 0.0139 S23: 0.0793 REMARK 3 S31: -0.8410 S32: -0.2451 S33: -0.0585 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8D2Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000265878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAR-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54854 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.854 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.9500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.28 REMARK 200 R MERGE FOR SHELL (I) : 0.64600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: ALPHAFOLD2 MODEL OBTAINED FROM THE MOONBEAR SERVER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MOLECULARDIMENSIONS/CALIBRE MORPHEUS REMARK 280 SCREEN, CONDITION G12: 12.5% (V/V) PEG 1000, 12.5% (W/V) PEG REMARK 280 3350, 12.5% (V/V) MPD: 20MM OF EACH SODIUM FORMATE, AMMONIUM REMARK 280 ACETATE, TRISODIUM CITRATE, SODIUM POTASSIUM L-TARTRATE, SODIUM REMARK 280 OXAMATE: 100MM BICINE/ TRIZMA BASE PH 8.5: REMARK 280 BUCEA.12746.A.B1.PS02032 AT 40MG/ML: TRAY: 321581 G12: CRYO: REMARK 280 DIRECT: PUCK KUZ4-9., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 287K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.08000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.79000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.69500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.79000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.08000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.69500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 ALA A 4 REMARK 465 PHE A 5 REMARK 465 ALA A 6 REMARK 465 SER A 7 REMARK 465 GLN A 8 REMARK 465 ALA A 9 REMARK 465 ASP A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 GLU A 13 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 ALA B 4 REMARK 465 PHE B 5 REMARK 465 ALA B 6 REMARK 465 SER B 7 REMARK 465 GLN B 8 REMARK 465 ALA B 9 REMARK 465 ASP B 10 REMARK 465 LEU B 11 REMARK 465 GLU B 12 REMARK 465 GLU B 13 REMARK 465 LYS B 14 REMARK 465 ASP B 319 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 ARG A 126 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 146 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 LYS A 234 CG CD CE NZ REMARK 470 ASP A 319 CG OD1 OD2 REMARK 470 LYS B 15 CG CD CE NZ REMARK 470 GLU B 31 CG CD OE1 OE2 REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 ARG B 146 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 154 CG CD CE NZ REMARK 470 ASP B 190 CG OD1 OD2 REMARK 470 LYS B 311 CG CD CE NZ REMARK 470 GLN B 318 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 183 O HOH B 501 2.05 REMARK 500 OG SER B 164 O LYS B 168 2.07 REMARK 500 OE1 GLU A 145 O HOH A 501 2.12 REMARK 500 O HOH B 564 O HOH B 681 2.13 REMARK 500 O HOH B 681 O HOH B 704 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 49 150.42 74.52 REMARK 500 THR A 51 168.64 68.92 REMARK 500 ARG A 112 14.90 -141.81 REMARK 500 PHE A 128 68.28 -117.45 REMARK 500 ARG A 146 -52.77 -126.43 REMARK 500 ASP A 170 128.64 -37.56 REMARK 500 TYR A 189 -54.90 -148.16 REMARK 500 TYR A 189 -66.32 -142.10 REMARK 500 ASP B 49 145.98 74.67 REMARK 500 THR B 51 166.29 66.83 REMARK 500 PHE B 128 64.97 -118.04 REMARK 500 TYR B 189 -66.52 -140.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 731 DISTANCE = 5.84 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 79 NE2 REMARK 620 2 HIS A 81 ND1 97.9 REMARK 620 3 HIS A 166 NE2 99.2 96.6 REMARK 620 4 OXM A 402 O3 162.4 98.2 86.0 REMARK 620 5 OXM A 402 N1 91.3 110.6 149.2 76.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 79 NE2 REMARK 620 2 HIS B 81 ND1 97.1 REMARK 620 3 HIS B 166 NE2 96.3 93.7 REMARK 620 4 ASP B 185 OD2 80.4 177.4 87.5 REMARK 620 5 OXM B 401 N1 94.9 109.6 152.6 69.8 REMARK 620 6 OXM B 401 O3 165.9 95.6 88.9 86.7 75.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: BUCEA.12746.A RELATED DB: TARGETTRACK DBREF 8D2Z A 1 319 UNP B4EIY5 B4EIY5_BURCJ 1 319 DBREF 8D2Z B 1 319 UNP B4EIY5 B4EIY5_BURCJ 1 319 SEQADV 8D2Z MET A -7 UNP B4EIY5 INITIATING METHIONINE SEQADV 8D2Z ALA A -6 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS A -5 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS A -4 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS A -3 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS A -2 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS A -1 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS A 0 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z MET B -7 UNP B4EIY5 INITIATING METHIONINE SEQADV 8D2Z ALA B -6 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS B -5 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS B -4 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS B -3 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS B -2 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS B -1 UNP B4EIY5 EXPRESSION TAG SEQADV 8D2Z HIS B 0 UNP B4EIY5 EXPRESSION TAG SEQRES 1 A 327 MET ALA HIS HIS HIS HIS HIS HIS MET ALA LYS ALA PHE SEQRES 2 A 327 ALA SER GLN ALA ASP LEU GLU GLU LYS LYS VAL THR TRP SEQRES 3 A 327 THR LYS LEU SER GLU ASN ALA TYR ALA TYR THR ALA GLU SEQRES 4 A 327 GLY ASP PRO ASN SER GLY VAL ILE ILE GLY ASP ASP SER SEQRES 5 A 327 VAL LEU ILE VAL ASP THR THR ALA THR PRO ALA MET ALA SEQRES 6 A 327 GLN ASP LEU ILE ALA LYS ILE ARG SER VAL THR ASP LYS SEQRES 7 A 327 PRO ILE LYS HIS VAL VAL LEU SER HIS TYR HIS ALA VAL SEQRES 8 A 327 ARG VAL LEU GLY ALA SER ALA TYR PHE ASP GLU GLY ALA SEQRES 9 A 327 GLN HIS VAL ILE ALA SER ARG GLY THR TYR GLU MET ILE SEQRES 10 A 327 VAL GLU ARG GLY GLU ALA ASP MET LYS SER GLU ILE GLU SEQRES 11 A 327 ARG PHE PRO ARG LEU PHE ALA GLY VAL GLU THR VAL PRO SEQRES 12 A 327 GLY LEU THR TRP PRO THR LEU VAL PHE GLU ARG GLU ILE SEQRES 13 A 327 THR LEU PHE LEU GLY LYS LEU GLU VAL LYS ILE MET HIS SEQRES 14 A 327 VAL GLY SER GLY HIS THR LYS GLY ASP THR ILE VAL TRP SEQRES 15 A 327 LEU PRO SER GLN LYS VAL LEU PHE SER GLY ASP LEU VAL SEQRES 16 A 327 GLU TYR ASP ALA ALA CYS TYR CYS GLY ASP ALA GLN LEU SEQRES 17 A 327 GLU GLN TRP PRO ALA THR LEU GLU ALA LEU ARG ALA LEU SEQRES 18 A 327 GLY ALA GLU LYS LEU VAL PRO GLY ARG GLY PRO ALA LEU SEQRES 19 A 327 LEU ASN PRO ALA GLU VAL ASN LYS GLY LEU ASP TYR THR SEQRES 20 A 327 LYS ASP PHE VAL THR THR LEU LEU ALA GLN GLY ARG LYS SEQRES 21 A 327 ALA VAL GLU ARG ASN LEU ASP LEU LYS ALA ALA MET ALA SEQRES 22 A 327 LEU THR ARG GLU ALA MET ASP PRO LYS PHE GLY HIS VAL SEQRES 23 A 327 PHE ILE TYR GLU HIS CYS LEU PRO PHE ASP VAL SER ARG SEQRES 24 A 327 ALA PHE ASP GLU ALA SER GLY ILE ALA HIS PRO ARG ILE SEQRES 25 A 327 TRP THR ALA GLN ARG ASP LYS ASP MET TRP ALA ALA LEU SEQRES 26 A 327 GLN ASP SEQRES 1 B 327 MET ALA HIS HIS HIS HIS HIS HIS MET ALA LYS ALA PHE SEQRES 2 B 327 ALA SER GLN ALA ASP LEU GLU GLU LYS LYS VAL THR TRP SEQRES 3 B 327 THR LYS LEU SER GLU ASN ALA TYR ALA TYR THR ALA GLU SEQRES 4 B 327 GLY ASP PRO ASN SER GLY VAL ILE ILE GLY ASP ASP SER SEQRES 5 B 327 VAL LEU ILE VAL ASP THR THR ALA THR PRO ALA MET ALA SEQRES 6 B 327 GLN ASP LEU ILE ALA LYS ILE ARG SER VAL THR ASP LYS SEQRES 7 B 327 PRO ILE LYS HIS VAL VAL LEU SER HIS TYR HIS ALA VAL SEQRES 8 B 327 ARG VAL LEU GLY ALA SER ALA TYR PHE ASP GLU GLY ALA SEQRES 9 B 327 GLN HIS VAL ILE ALA SER ARG GLY THR TYR GLU MET ILE SEQRES 10 B 327 VAL GLU ARG GLY GLU ALA ASP MET LYS SER GLU ILE GLU SEQRES 11 B 327 ARG PHE PRO ARG LEU PHE ALA GLY VAL GLU THR VAL PRO SEQRES 12 B 327 GLY LEU THR TRP PRO THR LEU VAL PHE GLU ARG GLU ILE SEQRES 13 B 327 THR LEU PHE LEU GLY LYS LEU GLU VAL LYS ILE MET HIS SEQRES 14 B 327 VAL GLY SER GLY HIS THR LYS GLY ASP THR ILE VAL TRP SEQRES 15 B 327 LEU PRO SER GLN LYS VAL LEU PHE SER GLY ASP LEU VAL SEQRES 16 B 327 GLU TYR ASP ALA ALA CYS TYR CYS GLY ASP ALA GLN LEU SEQRES 17 B 327 GLU GLN TRP PRO ALA THR LEU GLU ALA LEU ARG ALA LEU SEQRES 18 B 327 GLY ALA GLU LYS LEU VAL PRO GLY ARG GLY PRO ALA LEU SEQRES 19 B 327 LEU ASN PRO ALA GLU VAL ASN LYS GLY LEU ASP TYR THR SEQRES 20 B 327 LYS ASP PHE VAL THR THR LEU LEU ALA GLN GLY ARG LYS SEQRES 21 B 327 ALA VAL GLU ARG ASN LEU ASP LEU LYS ALA ALA MET ALA SEQRES 22 B 327 LEU THR ARG GLU ALA MET ASP PRO LYS PHE GLY HIS VAL SEQRES 23 B 327 PHE ILE TYR GLU HIS CYS LEU PRO PHE ASP VAL SER ARG SEQRES 24 B 327 ALA PHE ASP GLU ALA SER GLY ILE ALA HIS PRO ARG ILE SEQRES 25 B 327 TRP THR ALA GLN ARG ASP LYS ASP MET TRP ALA ALA LEU SEQRES 26 B 327 GLN ASP HET ZN A 401 1 HET OXM A 402 6 HET CL A 403 1 HET CL A 404 1 HET MRD A 405 8 HET ZN B 400 1 HET OXM B 401 6 HET MPD B 402 8 HETNAM ZN ZINC ION HETNAM OXM OXAMIC ACID HETNAM CL CHLORIDE ION HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 OXM 2(C2 H3 N O3) FORMUL 5 CL 2(CL 1-) FORMUL 7 MRD C6 H14 O2 FORMUL 10 MPD C6 H14 O2 FORMUL 11 HOH *494(H2 O) HELIX 1 AA1 THR A 53 SER A 66 1 14 HELIX 2 AA2 HIS A 81 LEU A 86 1 6 HELIX 3 AA3 GLY A 87 PHE A 92 5 6 HELIX 4 AA4 ARG A 103 PHE A 124 1 22 HELIX 5 AA5 PRO A 125 PHE A 128 5 4 HELIX 6 AA6 GLY A 130 VAL A 134 5 5 HELIX 7 AA7 GLY A 184 VAL A 187 5 4 HELIX 8 AA8 GLN A 202 ALA A 212 1 11 HELIX 9 AA9 ASN A 228 ARG A 256 1 29 HELIX 10 AB1 ASP A 259 GLY A 276 1 18 HELIX 11 AB2 ILE A 280 SER A 297 1 18 HELIX 12 AB3 THR A 306 ASP A 319 1 14 HELIX 13 AB4 THR B 53 SER B 66 1 14 HELIX 14 AB5 HIS B 81 LEU B 86 1 6 HELIX 15 AB6 GLY B 87 GLY B 95 5 9 HELIX 16 AB7 ARG B 103 PHE B 124 1 22 HELIX 17 AB8 PRO B 125 PHE B 128 5 4 HELIX 18 AB9 GLY B 130 VAL B 134 5 5 HELIX 19 AC1 GLY B 184 VAL B 187 5 4 HELIX 20 AC2 GLN B 202 GLY B 214 1 13 HELIX 21 AC3 ASN B 228 ARG B 256 1 29 HELIX 22 AC4 ASP B 259 GLY B 276 1 18 HELIX 23 AC5 ILE B 280 SER B 297 1 18 HELIX 24 AC6 THR B 306 LEU B 317 1 12 SHEET 1 AA1 7 VAL A 16 LYS A 20 0 SHEET 2 AA1 7 ALA A 25 ALA A 30 -1 O THR A 29 N THR A 17 SHEET 3 AA1 7 SER A 36 ILE A 40 -1 O VAL A 38 N TYR A 26 SHEET 4 AA1 7 VAL A 45 VAL A 48 -1 O LEU A 46 N ILE A 39 SHEET 5 AA1 7 ILE A 72 VAL A 76 1 O VAL A 76 N ILE A 47 SHEET 6 AA1 7 HIS A 98 SER A 102 1 O ILE A 100 N VAL A 75 SHEET 7 AA1 7 LEU A 142 PHE A 144 1 O LEU A 142 N ALA A 101 SHEET 1 AA2 5 GLU A 147 LEU A 152 0 SHEET 2 AA2 5 LEU A 155 MET A 160 -1 O LEU A 155 N LEU A 152 SHEET 3 AA2 5 ILE A 172 LEU A 175 -1 O TRP A 174 N LYS A 158 SHEET 4 AA2 5 VAL A 180 PHE A 182 -1 O PHE A 182 N VAL A 173 SHEET 5 AA2 5 LYS A 217 VAL A 219 1 O LYS A 217 N LEU A 181 SHEET 1 AA3 7 VAL B 16 LYS B 20 0 SHEET 2 AA3 7 ALA B 25 ALA B 30 -1 O THR B 29 N THR B 17 SHEET 3 AA3 7 SER B 36 ILE B 40 -1 O SER B 36 N TYR B 28 SHEET 4 AA3 7 VAL B 45 VAL B 48 -1 O LEU B 46 N ILE B 39 SHEET 5 AA3 7 ILE B 72 VAL B 76 1 O VAL B 76 N ILE B 47 SHEET 6 AA3 7 HIS B 98 SER B 102 1 O ILE B 100 N VAL B 75 SHEET 7 AA3 7 LEU B 142 PHE B 144 1 O LEU B 142 N ALA B 101 SHEET 1 AA4 5 GLU B 147 LEU B 152 0 SHEET 2 AA4 5 LEU B 155 MET B 160 -1 O ILE B 159 N ILE B 148 SHEET 3 AA4 5 ILE B 172 TRP B 174 -1 O TRP B 174 N LYS B 158 SHEET 4 AA4 5 VAL B 180 PHE B 182 -1 O PHE B 182 N VAL B 173 SHEET 5 AA4 5 LYS B 217 VAL B 219 1 O VAL B 219 N LEU B 181 LINK NE2 HIS A 79 ZN ZN A 401 1555 1555 2.23 LINK ND1 HIS A 81 ZN ZN A 401 1555 1555 2.24 LINK NE2 HIS A 166 ZN ZN A 401 1555 1555 2.20 LINK ZN ZN A 401 O3 OXM A 402 1555 1555 2.20 LINK ZN ZN A 401 N1 OXM A 402 1555 1555 2.14 LINK NE2 HIS B 79 ZN ZN B 400 1555 1555 2.24 LINK ND1 HIS B 81 ZN ZN B 400 1555 1555 2.22 LINK NE2 HIS B 166 ZN ZN B 400 1555 1555 2.20 LINK OD2 ASP B 185 ZN ZN B 400 1555 1555 2.61 LINK ZN ZN B 400 N1 OXM B 401 1555 1555 2.16 LINK ZN ZN B 400 O3 OXM B 401 1555 1555 2.25 CRYST1 58.160 89.390 121.580 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017194 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011187 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008225 0.00000