data_8D8I # _entry.id 8D8I # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8D8I pdb_00008d8i 10.2210/pdb8d8i/pdb WWPDB D_1000263922 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2022-12-14 2 'Structure model' 1 1 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' pdbx_initial_refinement_model # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8D8I _pdbx_database_status.recvd_initial_deposition_date 2022-06-08 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 lamees.hegazy@uhsp.edu LAMEES HEGAZY ? 'principal investigator/group leader' 0000-0003-2270-2284 3 burris.thomas@ufl.edu Thomas Burris P 'principal investigator/group leader' 0000-0003-2922-4449 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ronin, C.' 1 0000-0002-0930-5316 'Ciesielski, F.' 2 0000-0002-4077-7741 'Hegazy, L.' 3 ? 'Burris, P.T.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 13 _citation.language ? _citation.page_first 7131 _citation.page_last 7131 _citation.title 'Structural basis of synthetic agonist activation of the nuclear receptor REV-ERB.' _citation.year 2022 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-022-34892-4 _citation.pdbx_database_id_PubMed 36414641 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Murray, M.H.' 1 ? primary 'Valfort, A.C.' 2 ? primary 'Koelblen, T.' 3 ? primary 'Ronin, C.' 4 ? primary 'Ciesielski, F.' 5 ? primary 'Chatterjee, A.' 6 0000-0002-2990-6389 primary 'Veerakanellore, G.B.' 7 ? primary 'Elgendy, B.' 8 0000-0003-4800-7976 primary 'Walker, J.K.' 9 ? primary 'Hegazy, L.' 10 ? primary 'Burris, T.P.' 11 0000-0003-2922-4449 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Nuclear receptor subfamily 1 group D member 1' 26490.156 1 ? ? ? ? 2 polymer man 'Nuclear receptor corepressor 1' 2280.601 1 ? C2056A ? ? 3 non-polymer syn "(4S)-6-[([1,1'-biphenyl]-2-yl)oxy]-3-chloro[1,2,4]triazolo[4,3-b]pyridazine" 322.748 1 ? ? ? ? 4 water nat water 18.015 26 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Rev-erbA-alpha,V-erbA-related protein 1,EAR-1' 2 N-CoR,N-CoR1 # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMPEPTVEDVISQVARAHREIFTYAHDKLGSSPGNFNANHASGSPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHI PGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEEL GLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRVDAQ ; ;GSHMPEPTVEDVISQVARAHREIFTYAHDKLGSSPGNFNANHASGSPHGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHI PGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYSLQELGAMGMGDLLSAMFDFSEKLNSLALTEEEL GLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSRFTKLLLKLPDLRTLNNMHSEKLLSFRVDAQ ; A ? 2 'polypeptide(L)' no no THRLITLADHIAQIITQDFA THRLITLADHIAQIITQDFA B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "(4S)-6-[([1,1'-biphenyl]-2-yl)oxy]-3-chloro[1,2,4]triazolo[4,3-b]pyridazine" QFX 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 PRO n 1 6 GLU n 1 7 PRO n 1 8 THR n 1 9 VAL n 1 10 GLU n 1 11 ASP n 1 12 VAL n 1 13 ILE n 1 14 SER n 1 15 GLN n 1 16 VAL n 1 17 ALA n 1 18 ARG n 1 19 ALA n 1 20 HIS n 1 21 ARG n 1 22 GLU n 1 23 ILE n 1 24 PHE n 1 25 THR n 1 26 TYR n 1 27 ALA n 1 28 HIS n 1 29 ASP n 1 30 LYS n 1 31 LEU n 1 32 GLY n 1 33 SER n 1 34 SER n 1 35 PRO n 1 36 GLY n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 ALA n 1 41 ASN n 1 42 HIS n 1 43 ALA n 1 44 SER n 1 45 GLY n 1 46 SER n 1 47 PRO n 1 48 HIS n 1 49 GLY n 1 50 ARG n 1 51 SER n 1 52 GLY n 1 53 ARG n 1 54 THR n 1 55 VAL n 1 56 GLN n 1 57 GLU n 1 58 ILE n 1 59 TRP n 1 60 GLU n 1 61 ASP n 1 62 PHE n 1 63 SER n 1 64 MET n 1 65 SER n 1 66 PHE n 1 67 THR n 1 68 PRO n 1 69 ALA n 1 70 VAL n 1 71 ARG n 1 72 GLU n 1 73 VAL n 1 74 VAL n 1 75 GLU n 1 76 PHE n 1 77 ALA n 1 78 LYS n 1 79 HIS n 1 80 ILE n 1 81 PRO n 1 82 GLY n 1 83 PHE n 1 84 ARG n 1 85 ASP n 1 86 LEU n 1 87 SER n 1 88 GLN n 1 89 HIS n 1 90 ASP n 1 91 GLN n 1 92 VAL n 1 93 THR n 1 94 LEU n 1 95 LEU n 1 96 LYS n 1 97 ALA n 1 98 GLY n 1 99 THR n 1 100 PHE n 1 101 GLU n 1 102 VAL n 1 103 LEU n 1 104 MET n 1 105 VAL n 1 106 ARG n 1 107 PHE n 1 108 ALA n 1 109 SER n 1 110 LEU n 1 111 PHE n 1 112 ASN n 1 113 VAL n 1 114 LYS n 1 115 ASP n 1 116 GLN n 1 117 THR n 1 118 VAL n 1 119 MET n 1 120 PHE n 1 121 LEU n 1 122 SER n 1 123 ARG n 1 124 THR n 1 125 THR n 1 126 TYR n 1 127 SER n 1 128 LEU n 1 129 GLN n 1 130 GLU n 1 131 LEU n 1 132 GLY n 1 133 ALA n 1 134 MET n 1 135 GLY n 1 136 MET n 1 137 GLY n 1 138 ASP n 1 139 LEU n 1 140 LEU n 1 141 SER n 1 142 ALA n 1 143 MET n 1 144 PHE n 1 145 ASP n 1 146 PHE n 1 147 SER n 1 148 GLU n 1 149 LYS n 1 150 LEU n 1 151 ASN n 1 152 SER n 1 153 LEU n 1 154 ALA n 1 155 LEU n 1 156 THR n 1 157 GLU n 1 158 GLU n 1 159 GLU n 1 160 LEU n 1 161 GLY n 1 162 LEU n 1 163 PHE n 1 164 THR n 1 165 ALA n 1 166 VAL n 1 167 VAL n 1 168 LEU n 1 169 VAL n 1 170 SER n 1 171 ALA n 1 172 ASP n 1 173 ARG n 1 174 SER n 1 175 GLY n 1 176 MET n 1 177 GLU n 1 178 ASN n 1 179 SER n 1 180 ALA n 1 181 SER n 1 182 VAL n 1 183 GLU n 1 184 GLN n 1 185 LEU n 1 186 GLN n 1 187 GLU n 1 188 THR n 1 189 LEU n 1 190 LEU n 1 191 ARG n 1 192 ALA n 1 193 LEU n 1 194 ARG n 1 195 ALA n 1 196 LEU n 1 197 VAL n 1 198 LEU n 1 199 LYS n 1 200 ASN n 1 201 ARG n 1 202 PRO n 1 203 LEU n 1 204 GLU n 1 205 THR n 1 206 SER n 1 207 ARG n 1 208 PHE n 1 209 THR n 1 210 LYS n 1 211 LEU n 1 212 LEU n 1 213 LEU n 1 214 LYS n 1 215 LEU n 1 216 PRO n 1 217 ASP n 1 218 LEU n 1 219 ARG n 1 220 THR n 1 221 LEU n 1 222 ASN n 1 223 ASN n 1 224 MET n 1 225 HIS n 1 226 SER n 1 227 GLU n 1 228 LYS n 1 229 LEU n 1 230 LEU n 1 231 SER n 1 232 PHE n 1 233 ARG n 1 234 VAL n 1 235 ASP n 1 236 ALA n 1 237 GLN n 2 1 THR n 2 2 HIS n 2 3 ARG n 2 4 LEU n 2 5 ILE n 2 6 THR n 2 7 LEU n 2 8 ALA n 2 9 ASP n 2 10 HIS n 2 11 ILE n 2 12 ALA n 2 13 GLN n 2 14 ILE n 2 15 ILE n 2 16 THR n 2 17 GLN n 2 18 ASP n 2 19 PHE n 2 20 ALA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 47 human ? 'NR1D1, EAR1, HREV, THRAL' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 48 237 human ? 'NR1D1, EAR1, HREV, THRAL' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli BL21(DE3)' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 20 human ? 'NCOR1, KIAA1047' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 QFX non-polymer . "(4S)-6-[([1,1'-biphenyl]-2-yl)oxy]-3-chloro[1,2,4]triazolo[4,3-b]pyridazine" ? 'C17 H11 Cl N4 O' 322.748 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 277 ? ? ? A . n A 1 2 SER 2 278 ? ? ? A . n A 1 3 HIS 3 279 ? ? ? A . n A 1 4 MET 4 280 ? ? ? A . n A 1 5 PRO 5 281 ? ? ? A . n A 1 6 GLU 6 282 ? ? ? A . n A 1 7 PRO 7 283 283 PRO PRO A . n A 1 8 THR 8 284 284 THR THR A . n A 1 9 VAL 9 285 285 VAL VAL A . n A 1 10 GLU 10 286 286 GLU GLU A . n A 1 11 ASP 11 287 287 ASP ASP A . n A 1 12 VAL 12 288 288 VAL VAL A . n A 1 13 ILE 13 289 289 ILE ILE A . n A 1 14 SER 14 290 290 SER SER A . n A 1 15 GLN 15 291 291 GLN GLN A . n A 1 16 VAL 16 292 292 VAL VAL A . n A 1 17 ALA 17 293 293 ALA ALA A . n A 1 18 ARG 18 294 294 ARG ARG A . n A 1 19 ALA 19 295 295 ALA ALA A . n A 1 20 HIS 20 296 296 HIS HIS A . n A 1 21 ARG 21 297 297 ARG ARG A . n A 1 22 GLU 22 298 298 GLU GLU A . n A 1 23 ILE 23 299 299 ILE ILE A . n A 1 24 PHE 24 300 300 PHE PHE A . n A 1 25 THR 25 301 301 THR THR A . n A 1 26 TYR 26 403 ? ? ? A . n A 1 27 ALA 27 404 ? ? ? A . n A 1 28 HIS 28 405 ? ? ? A . n A 1 29 ASP 29 406 ? ? ? A . n A 1 30 LYS 30 407 ? ? ? A . n A 1 31 LEU 31 408 ? ? ? A . n A 1 32 GLY 32 409 ? ? ? A . n A 1 33 SER 33 410 ? ? ? A . n A 1 34 SER 34 411 ? ? ? A . n A 1 35 PRO 35 412 ? ? ? A . n A 1 36 GLY 36 413 ? ? ? A . n A 1 37 ASN 37 414 ? ? ? A . n A 1 38 PHE 38 415 ? ? ? A . n A 1 39 ASN 39 416 ? ? ? A . n A 1 40 ALA 40 417 ? ? ? A . n A 1 41 ASN 41 418 ? ? ? A . n A 1 42 HIS 42 419 ? ? ? A . n A 1 43 ALA 43 420 ? ? ? A . n A 1 44 SER 44 421 ? ? ? A . n A 1 45 GLY 45 422 ? ? ? A . n A 1 46 SER 46 423 ? ? ? A . n A 1 47 PRO 47 424 ? ? ? A . n A 1 48 HIS 48 425 ? ? ? A . n A 1 49 GLY 49 426 ? ? ? A . n A 1 50 ARG 50 427 ? ? ? A . n A 1 51 SER 51 428 ? ? ? A . n A 1 52 GLY 52 429 ? ? ? A . n A 1 53 ARG 53 430 430 ARG ARG A . n A 1 54 THR 54 431 431 THR THR A . n A 1 55 VAL 55 432 432 VAL VAL A . n A 1 56 GLN 56 433 433 GLN GLN A . n A 1 57 GLU 57 434 434 GLU GLU A . n A 1 58 ILE 58 435 435 ILE ILE A . n A 1 59 TRP 59 436 436 TRP TRP A . n A 1 60 GLU 60 437 437 GLU GLU A . n A 1 61 ASP 61 438 438 ASP ASP A . n A 1 62 PHE 62 439 439 PHE PHE A . n A 1 63 SER 63 440 440 SER SER A . n A 1 64 MET 64 441 441 MET MET A . n A 1 65 SER 65 442 442 SER SER A . n A 1 66 PHE 66 443 443 PHE PHE A . n A 1 67 THR 67 444 444 THR THR A . n A 1 68 PRO 68 445 445 PRO PRO A . n A 1 69 ALA 69 446 446 ALA ALA A . n A 1 70 VAL 70 447 447 VAL VAL A . n A 1 71 ARG 71 448 448 ARG ARG A . n A 1 72 GLU 72 449 449 GLU GLU A . n A 1 73 VAL 73 450 450 VAL VAL A . n A 1 74 VAL 74 451 451 VAL VAL A . n A 1 75 GLU 75 452 452 GLU GLU A . n A 1 76 PHE 76 453 453 PHE PHE A . n A 1 77 ALA 77 454 454 ALA ALA A . n A 1 78 LYS 78 455 455 LYS LYS A . n A 1 79 HIS 79 456 456 HIS HIS A . n A 1 80 ILE 80 457 457 ILE ILE A . n A 1 81 PRO 81 458 458 PRO PRO A . n A 1 82 GLY 82 459 459 GLY GLY A . n A 1 83 PHE 83 460 460 PHE PHE A . n A 1 84 ARG 84 461 461 ARG ARG A . n A 1 85 ASP 85 462 462 ASP ASP A . n A 1 86 LEU 86 463 463 LEU LEU A . n A 1 87 SER 87 464 464 SER SER A . n A 1 88 GLN 88 465 465 GLN GLN A . n A 1 89 HIS 89 466 466 HIS HIS A . n A 1 90 ASP 90 467 467 ASP ASP A . n A 1 91 GLN 91 468 468 GLN GLN A . n A 1 92 VAL 92 469 469 VAL VAL A . n A 1 93 THR 93 470 470 THR THR A . n A 1 94 LEU 94 471 471 LEU LEU A . n A 1 95 LEU 95 472 472 LEU LEU A . n A 1 96 LYS 96 473 473 LYS LYS A . n A 1 97 ALA 97 474 474 ALA ALA A . n A 1 98 GLY 98 475 475 GLY GLY A . n A 1 99 THR 99 476 476 THR THR A . n A 1 100 PHE 100 477 477 PHE PHE A . n A 1 101 GLU 101 478 478 GLU GLU A . n A 1 102 VAL 102 479 479 VAL VAL A . n A 1 103 LEU 103 480 480 LEU LEU A . n A 1 104 MET 104 481 481 MET MET A . n A 1 105 VAL 105 482 482 VAL VAL A . n A 1 106 ARG 106 483 483 ARG ARG A . n A 1 107 PHE 107 484 484 PHE PHE A . n A 1 108 ALA 108 485 485 ALA ALA A . n A 1 109 SER 109 486 486 SER SER A . n A 1 110 LEU 110 487 487 LEU LEU A . n A 1 111 PHE 111 488 488 PHE PHE A . n A 1 112 ASN 112 489 489 ASN ASN A . n A 1 113 VAL 113 490 490 VAL VAL A . n A 1 114 LYS 114 491 491 LYS LYS A . n A 1 115 ASP 115 492 492 ASP ASP A . n A 1 116 GLN 116 493 493 GLN GLN A . n A 1 117 THR 117 494 494 THR THR A . n A 1 118 VAL 118 495 495 VAL VAL A . n A 1 119 MET 119 496 496 MET MET A . n A 1 120 PHE 120 497 497 PHE PHE A . n A 1 121 LEU 121 498 498 LEU LEU A . n A 1 122 SER 122 499 499 SER SER A . n A 1 123 ARG 123 500 500 ARG ARG A . n A 1 124 THR 124 501 501 THR THR A . n A 1 125 THR 125 502 502 THR THR A . n A 1 126 TYR 126 503 503 TYR TYR A . n A 1 127 SER 127 504 504 SER SER A . n A 1 128 LEU 128 505 505 LEU LEU A . n A 1 129 GLN 129 506 506 GLN GLN A . n A 1 130 GLU 130 507 507 GLU GLU A . n A 1 131 LEU 131 508 508 LEU LEU A . n A 1 132 GLY 132 509 509 GLY GLY A . n A 1 133 ALA 133 510 510 ALA ALA A . n A 1 134 MET 134 511 511 MET MET A . n A 1 135 GLY 135 512 512 GLY GLY A . n A 1 136 MET 136 513 513 MET MET A . n A 1 137 GLY 137 514 514 GLY GLY A . n A 1 138 ASP 138 515 515 ASP ASP A . n A 1 139 LEU 139 516 516 LEU LEU A . n A 1 140 LEU 140 517 517 LEU LEU A . n A 1 141 SER 141 518 518 SER SER A . n A 1 142 ALA 142 519 519 ALA ALA A . n A 1 143 MET 143 520 520 MET MET A . n A 1 144 PHE 144 521 521 PHE PHE A . n A 1 145 ASP 145 522 522 ASP ASP A . n A 1 146 PHE 146 523 523 PHE PHE A . n A 1 147 SER 147 524 524 SER SER A . n A 1 148 GLU 148 525 525 GLU GLU A . n A 1 149 LYS 149 526 526 LYS LYS A . n A 1 150 LEU 150 527 527 LEU LEU A . n A 1 151 ASN 151 528 528 ASN ASN A . n A 1 152 SER 152 529 529 SER SER A . n A 1 153 LEU 153 530 530 LEU LEU A . n A 1 154 ALA 154 531 531 ALA ALA A . n A 1 155 LEU 155 532 532 LEU LEU A . n A 1 156 THR 156 533 533 THR THR A . n A 1 157 GLU 157 534 534 GLU GLU A . n A 1 158 GLU 158 535 535 GLU GLU A . n A 1 159 GLU 159 536 536 GLU GLU A . n A 1 160 LEU 160 537 537 LEU LEU A . n A 1 161 GLY 161 538 538 GLY GLY A . n A 1 162 LEU 162 539 539 LEU LEU A . n A 1 163 PHE 163 540 540 PHE PHE A . n A 1 164 THR 164 541 541 THR THR A . n A 1 165 ALA 165 542 542 ALA ALA A . n A 1 166 VAL 166 543 543 VAL VAL A . n A 1 167 VAL 167 544 544 VAL VAL A . n A 1 168 LEU 168 545 545 LEU LEU A . n A 1 169 VAL 169 546 546 VAL VAL A . n A 1 170 SER 170 547 547 SER SER A . n A 1 171 ALA 171 548 548 ALA ALA A . n A 1 172 ASP 172 549 549 ASP ASP A . n A 1 173 ARG 173 550 550 ARG ARG A . n A 1 174 SER 174 551 551 SER SER A . n A 1 175 GLY 175 552 552 GLY GLY A . n A 1 176 MET 176 553 553 MET MET A . n A 1 177 GLU 177 554 554 GLU GLU A . n A 1 178 ASN 178 555 555 ASN ASN A . n A 1 179 SER 179 556 556 SER SER A . n A 1 180 ALA 180 557 557 ALA ALA A . n A 1 181 SER 181 558 558 SER SER A . n A 1 182 VAL 182 559 559 VAL VAL A . n A 1 183 GLU 183 560 560 GLU GLU A . n A 1 184 GLN 184 561 561 GLN GLN A . n A 1 185 LEU 185 562 562 LEU LEU A . n A 1 186 GLN 186 563 563 GLN GLN A . n A 1 187 GLU 187 564 564 GLU GLU A . n A 1 188 THR 188 565 565 THR THR A . n A 1 189 LEU 189 566 566 LEU LEU A . n A 1 190 LEU 190 567 567 LEU LEU A . n A 1 191 ARG 191 568 568 ARG ARG A . n A 1 192 ALA 192 569 569 ALA ALA A . n A 1 193 LEU 193 570 570 LEU LEU A . n A 1 194 ARG 194 571 571 ARG ARG A . n A 1 195 ALA 195 572 572 ALA ALA A . n A 1 196 LEU 196 573 573 LEU LEU A . n A 1 197 VAL 197 574 574 VAL VAL A . n A 1 198 LEU 198 575 575 LEU LEU A . n A 1 199 LYS 199 576 576 LYS LYS A . n A 1 200 ASN 200 577 577 ASN ASN A . n A 1 201 ARG 201 578 578 ARG ARG A . n A 1 202 PRO 202 579 579 PRO PRO A . n A 1 203 LEU 203 580 580 LEU LEU A . n A 1 204 GLU 204 581 581 GLU GLU A . n A 1 205 THR 205 582 582 THR THR A . n A 1 206 SER 206 583 583 SER SER A . n A 1 207 ARG 207 584 584 ARG ARG A . n A 1 208 PHE 208 585 585 PHE PHE A . n A 1 209 THR 209 586 586 THR THR A . n A 1 210 LYS 210 587 587 LYS LYS A . n A 1 211 LEU 211 588 588 LEU LEU A . n A 1 212 LEU 212 589 589 LEU LEU A . n A 1 213 LEU 213 590 590 LEU LEU A . n A 1 214 LYS 214 591 591 LYS LYS A . n A 1 215 LEU 215 592 592 LEU LEU A . n A 1 216 PRO 216 593 593 PRO PRO A . n A 1 217 ASP 217 594 594 ASP ASP A . n A 1 218 LEU 218 595 595 LEU LEU A . n A 1 219 ARG 219 596 596 ARG ARG A . n A 1 220 THR 220 597 597 THR THR A . n A 1 221 LEU 221 598 598 LEU LEU A . n A 1 222 ASN 222 599 599 ASN ASN A . n A 1 223 ASN 223 600 600 ASN ASN A . n A 1 224 MET 224 601 601 MET MET A . n A 1 225 HIS 225 602 602 HIS HIS A . n A 1 226 SER 226 603 603 SER SER A . n A 1 227 GLU 227 604 604 GLU GLU A . n A 1 228 LYS 228 605 605 LYS LYS A . n A 1 229 LEU 229 606 606 LEU LEU A . n A 1 230 LEU 230 607 607 LEU LEU A . n A 1 231 SER 231 608 608 SER SER A . n A 1 232 PHE 232 609 609 PHE PHE A . n A 1 233 ARG 233 610 610 ARG ARG A . n A 1 234 VAL 234 611 611 VAL VAL A . n A 1 235 ASP 235 612 ? ? ? A . n A 1 236 ALA 236 613 ? ? ? A . n A 1 237 GLN 237 614 ? ? ? A . n B 2 1 THR 1 2045 2045 THR THR B . n B 2 2 HIS 2 2046 2046 HIS HIS B . n B 2 3 ARG 3 2047 2047 ARG ARG B . n B 2 4 LEU 4 2048 2048 LEU LEU B . n B 2 5 ILE 5 2049 2049 ILE ILE B . n B 2 6 THR 6 2050 2050 THR THR B . n B 2 7 LEU 7 2051 2051 LEU LEU B . n B 2 8 ALA 8 2052 2052 ALA ALA B . n B 2 9 ASP 9 2053 2053 ASP ASP B . n B 2 10 HIS 10 2054 2054 HIS HIS B . n B 2 11 ILE 11 2055 2055 ILE ILE B . n B 2 12 ALA 12 2056 2056 ALA ALA B . n B 2 13 GLN 13 2057 2057 GLN GLN B . n B 2 14 ILE 14 2058 2058 ILE ILE B . n B 2 15 ILE 15 2059 2059 ILE ILE B . n B 2 16 THR 16 2060 2060 THR THR B . n B 2 17 GLN 17 2061 2061 GLN GLN B . n B 2 18 ASP 18 2062 2062 ASP ASP B . n B 2 19 PHE 19 2063 2063 PHE PHE B . n B 2 20 ALA 20 2064 2064 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 QFX 1 4000 4000 QFX LIG A . D 4 HOH 1 4101 20 HOH HOH A . D 4 HOH 2 4102 12 HOH HOH A . D 4 HOH 3 4103 6 HOH HOH A . D 4 HOH 4 4104 11 HOH HOH A . D 4 HOH 5 4105 21 HOH HOH A . D 4 HOH 6 4106 24 HOH HOH A . D 4 HOH 7 4107 2 HOH HOH A . D 4 HOH 8 4108 25 HOH HOH A . D 4 HOH 9 4109 15 HOH HOH A . D 4 HOH 10 4110 22 HOH HOH A . D 4 HOH 11 4111 5 HOH HOH A . D 4 HOH 12 4112 16 HOH HOH A . D 4 HOH 13 4113 7 HOH HOH A . D 4 HOH 14 4114 13 HOH HOH A . D 4 HOH 15 4115 14 HOH HOH A . D 4 HOH 16 4116 3 HOH HOH A . D 4 HOH 17 4117 19 HOH HOH A . D 4 HOH 18 4118 1 HOH HOH A . D 4 HOH 19 4119 17 HOH HOH A . D 4 HOH 20 4120 4 HOH HOH A . D 4 HOH 21 4121 9 HOH HOH A . D 4 HOH 22 4122 26 HOH HOH A . D 4 HOH 23 4123 23 HOH HOH A . D 4 HOH 24 4124 18 HOH HOH A . D 4 HOH 25 4125 10 HOH HOH A . D 4 HOH 26 4126 8 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.11.8 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 'jan 10, 2022' 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? STARANISO ? ? ? 2.3.77 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? 2.8.3 5 # _cell.angle_alpha 90 _cell.angle_alpha_esd ? _cell.angle_beta 90 _cell.angle_beta_esd ? _cell.angle_gamma 120 _cell.angle_gamma_esd ? _cell.entry_id 8D8I _cell.details ? _cell.formula_units_Z ? _cell.length_a 115.073 _cell.length_a_esd ? _cell.length_b 115.073 _cell.length_b_esd ? _cell.length_c 107.32 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 18 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8D8I _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8D8I _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '80mM Na Hepes pH7.5, 200mM proline, 8% glycerol and 18% PEG3350' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-03-15 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9786 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9786 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8D8I _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.504 _reflns.d_resolution_low 73.027 _reflns.details ;Some remarks regarding the mmCIF items written, the PDB Exchange Dictionary (PDBx/mmCIF) Version 5.0 supporting the data files in the current PDB archive (dictionary version 5.325, last updated 2020-04-13: http://mmcif.wwpdb.org/dictionaries/mmcif_pdbx_v50.dic/Index/) and the actual quantities provided by MRFANA (https://github.com/githubgphl/MRFANA) from the autoPROC package (https://www.globalphasing.com/autoproc/). In general, the mmCIF categories here should provide items that are currently used in the PDB archive. If there are alternatives, the one recommended by the PDB developers has been selected. The distinction between *_all and *_obs quantities is not always clear: often only one version is actively used within the PDB archive (or is the one recommended by PDB developers). The intention of distinguishing between classes of reflections before and after some kind of observation criterion was applied, can in principle be useful - but such criteria change in various ways throughout the data processing steps (rejection of overloaded or too partial reflections, outlier/misfit rejections during scaling etc) and there is no retrospect computation of data scaling/merging statistics for the reflections used in the final refinement (where another observation criterion might have been applied). Typical data processing will usually only provide one version of statistics at various stages and these are given in the recommended item here, irrespective of the "_all" and "_obs" connotation, see e.g. the use of _reflns.pdbx_Rmerge_I_obs, _reflns.pdbx_Rrim_I_all and _reflns.pdbx_Rpim_I_all. Please note that all statistics related to "merged intensities" (or "merging") are based on inverse-variance weighting of the individual measurements making up a symmetry-unique reflection. This is standard for several decades now, even if some of the dictionary definitions seem to suggest that a simple "mean" or "average" intensity is being used instead. R-values are always given for all symmetry-equivalent reflections following Friedel's law, i.e. Bijvoet pairs are not treated separately (since we want to describe the overall mean intensity and not the mean I(+) and I(-) here). The Rrim metric is identical to the Rmeas R-value and only differs in name. _reflns.pdbx_number_measured_all is the number of measured intensities just before the final merging step (at which point no additional rejection takes place). _reflns.number_obs is the number of symmetry-unique observations, i.e. the result of merging those measurements via inverse-variance weighting. _reflns.pdbx_netI_over_sigmaI is based on the merged intensities (_reflns.number_obs) as expected. _reflns.pdbx_redundancy is synonymous with "multiplicity". The per-shell item _reflns_shell.number_measured_all corresponds to the overall value _reflns.pdbx_number_measured_all. The per-shell item _reflns_shell.number_unique_all corresponds to the overall value _reflns.number_obs. The per-shell item _reflns_shell.percent_possible_all corresponds to the overall value _reflns.percent_possible_obs. The per-shell item _reflns_shell.meanI_over_sigI_obs corresponds to the overall value given as _reflns.pdbx_netI_over_sigmaI. But be aware of the incorrect definition of the former in the current dictionary! ; _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7248 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 85.5 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 8.11 _reflns.pdbx_Rmerge_I_obs 0.0691 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.44 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.0741 _reflns.pdbx_Rpim_I_all 0.0258 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 58812 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] 1.00000 _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] 1.00000 _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] 0.00000 _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] 1.00000 _reflns.pdbx_aniso_diffraction_limit_1 2.70400 _reflns.pdbx_aniso_diffraction_limit_2 2.70400 _reflns.pdbx_aniso_diffraction_limit_3 2.41300 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] 0.0000 _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] 1.0000 _reflns.pdbx_aniso_B_tensor_eigenvalue_1 86.5 _reflns.pdbx_aniso_B_tensor_eigenvalue_2 86.5 _reflns.pdbx_aniso_B_tensor_eigenvalue_3 68.8 _reflns.pdbx_orthogonalization_convention pdb _reflns.pdbx_percent_possible_ellipsoidal 85.5 _reflns.pdbx_percent_possible_spherical 75.7 _reflns.pdbx_percent_possible_ellipsoidal_anomalous 83.2 _reflns.pdbx_percent_possible_spherical_anomalous 73.2 _reflns.pdbx_redundancy_anomalous 4.33 _reflns.pdbx_CC_half_anomalous -0.069 _reflns.pdbx_absDiff_over_sigma_anomalous 0.779 _reflns.pdbx_percent_possible_anomalous 83.2 _reflns.pdbx_observed_signal_threshold 1.20 _reflns.pdbx_signal_type 'local ' _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? _reflns.pdbx_CC_split_method ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 7.458 73.027 ? 51.19 2682 2682 ? 385 385 96.0 ? ? ? ? 0.0285 ? ? ? ? ? ? ? ? 6.97 ? ? ? ? 0.0307 0.0110 ? 1 ? 0.999 ? ? 96.0 96.0 91.0 91.0 4.09 -0.113 0.725 91.0 5.930 7.458 ? 40.14 2873 2873 ? 373 373 99.2 ? ? ? ? 0.0397 ? ? ? ? ? ? ? ? 7.70 ? ? ? ? 0.0426 0.0148 ? 2 ? 0.999 ? ? 99.2 99.2 95.9 95.9 4.26 0.056 0.755 95.9 5.167 5.930 ? 37.40 2888 2888 ? 374 374 100.0 ? ? ? ? 0.0462 ? ? ? ? ? ? ? ? 7.72 ? ? ? ? 0.0496 0.0174 ? 3 ? 0.998 ? ? 100.0 100.0 97.2 97.2 4.20 -0.040 0.816 97.2 4.696 5.167 ? 39.48 2990 2990 ? 368 368 99.7 ? ? ? ? 0.0445 ? ? ? ? ? ? ? ? 8.12 ? ? ? ? 0.0477 0.0165 ? 4 ? 0.999 ? ? 99.7 99.7 97.5 97.5 4.38 -0.040 0.726 97.5 4.358 4.696 ? 35.58 2890 2890 ? 364 364 100.0 ? ? ? ? 0.0484 ? ? ? ? ? ? ? ? 7.94 ? ? ? ? 0.0520 0.0182 ? 5 ? 0.999 ? ? 100.0 100.0 97.5 97.5 4.25 0.105 0.778 97.5 4.103 4.358 ? 33.10 2963 2963 ? 369 369 100.0 ? ? ? ? 0.0559 ? ? ? ? ? ? ? ? 8.03 ? ? ? ? 0.0599 0.0209 ? 6 ? 0.998 ? ? 100.0 100.0 97.6 97.6 4.28 -0.123 0.784 97.6 3.894 4.103 ? 26.84 2849 2849 ? 369 369 100.0 ? ? ? ? 0.0750 ? ? ? ? ? ? ? ? 7.72 ? ? ? ? 0.0809 0.0292 ? 7 ? 0.997 ? ? 100.0 100.0 97.6 97.6 4.14 -0.033 0.812 97.6 3.724 3.894 ? 23.02 2916 2916 ? 359 359 100.0 ? ? ? ? 0.0918 ? ? ? ? ? ? ? ? 8.12 ? ? ? ? 0.0984 0.0345 ? 8 ? 0.995 ? ? 100.0 100.0 98.2 98.2 4.27 -0.028 0.831 98.2 3.578 3.724 ? 18.79 2933 2933 ? 361 361 100.0 ? ? ? ? 0.1318 ? ? ? ? ? ? ? ? 8.12 ? ? ? ? 0.1414 0.0494 ? 9 ? 0.989 ? ? 100.0 100.0 98.2 98.2 4.28 -0.134 0.790 98.2 3.363 3.578 ? 13.41 2917 2917 ? 372 372 54.9 ? ? ? ? 0.1809 ? ? ? ? ? ? ? ? 7.84 ? ? ? ? 0.1942 0.0683 ? 10 ? 0.989 ? ? 54.9 54.9 53.7 53.7 4.19 0.057 0.772 53.7 3.264 3.363 ? 9.56 2880 2880 ? 363 363 99.7 ? ? ? ? 0.2540 ? ? ? ? ? ? ? ? 7.93 ? ? ? ? 0.2722 0.0954 ? 11 ? 0.978 ? ? 99.7 99.7 97.0 97.0 4.20 0.025 0.869 97.0 3.180 3.264 ? 7.36 2938 2938 ? 360 360 99.7 ? ? ? ? 0.3274 ? ? ? ? ? ? ? ? 8.16 ? ? ? ? 0.3502 0.1210 ? 12 ? 0.961 ? ? 99.7 99.7 96.1 96.1 4.34 -0.057 0.768 96.1 3.100 3.180 ? 6.25 2984 2984 ? 360 360 99.7 ? ? ? ? 0.4020 ? ? ? ? ? ? ? ? 8.29 ? ? ? ? 0.4294 0.1474 ? 13 ? 0.964 ? ? 99.7 99.7 97.0 97.0 4.38 0.053 0.775 97.0 3.028 3.100 ? 4.95 2774 2774 ? 362 362 100.0 ? ? ? ? 0.4554 ? ? ? ? ? ? ? ? 7.66 ? ? ? ? 0.4887 0.1731 ? 14 ? 0.933 ? ? 100.0 100.0 96.7 96.7 4.07 -0.060 0.779 96.7 2.965 3.028 ? 3.68 2860 2860 ? 354 354 100.0 ? ? ? ? 0.5988 ? ? ? ? ? ? ? ? 8.08 ? ? ? ? 0.6399 0.2206 ? 15 ? 0.901 ? ? 100.0 100.0 97.5 97.5 4.28 -0.058 0.786 97.5 2.905 2.965 ? 2.82 2951 2951 ? 357 357 100.0 ? ? ? ? 0.7717 ? ? ? ? ? ? ? ? 8.27 ? ? ? ? 0.8241 0.2818 ? 16 ? 0.833 ? ? 100.0 100.0 97.0 97.0 4.33 -0.027 0.790 97.0 2.851 2.905 ? 2.52 2963 2963 ? 354 354 97.8 ? ? ? ? 0.8740 ? ? ? ? ? ? ? ? 8.37 ? ? ? ? 0.9315 0.3159 ? 17 ? 0.801 ? ? 97.8 97.8 96.1 96.1 4.39 -0.029 0.734 96.1 2.793 2.851 ? 2.24 3024 3024 ? 348 348 88.8 ? ? ? ? 0.9844 ? ? ? ? ? ? ? ? 8.69 ? ? ? ? 1.0468 0.3488 ? 18 ? 0.768 ? ? 88.8 88.8 87.8 87.8 4.52 0.088 0.780 87.8 2.734 2.793 ? 2.13 3263 3263 ? 346 346 74.9 ? ? ? ? 1.0827 ? ? ? ? ? ? ? ? 9.43 ? ? ? ? 1.1449 0.3681 ? 19 ? 0.698 ? ? 74.9 74.9 75.3 75.3 4.85 0.030 0.791 75.3 2.504 2.734 ? 1.42 3274 3274 ? 350 350 32.6 ? ? ? ? 1.5137 ? ? ? ? ? ? ? ? 9.35 ? ? ? ? 1.6020 0.5169 ? 20 ? 0.559 ? ? 32.6 16.1 31.5 15.2 4.99 -0.110 0.704 31.5 # _refine.aniso_B[1][1] 0.7349 _refine.aniso_B[1][2] 0 _refine.aniso_B[1][3] 0 _refine.aniso_B[2][2] 0.7349 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] -1.4697 _refine.B_iso_max ? _refine.B_iso_mean 77.83 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.957 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8D8I _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.504 _refine.ls_d_res_low 73.03 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7248 _refine.ls_number_reflns_R_free 363 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 75.8 _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2069 _refine.ls_R_factor_R_free 0.2395 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2052 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'In house structure' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI 0.321 _refine.pdbx_overall_SU_R_Blow_DPI 3.057 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_analyze.entry_id 8D8I _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_coordinate_error_obs 0.38 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_sigma_a_free_details ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_obs_details ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.RG_d_res_high ? _refine_analyze.RG_d_res_low ? _refine_analyze.RG_free ? _refine_analyze.RG_work ? _refine_analyze.RG_free_work_ratio ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.504 _refine_hist.d_res_low 73.03 _refine_hist.number_atoms_solvent 26 _refine_hist.number_atoms_total 1810 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1761 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1824 ? t_bond_d 2 HARMONIC 'X-RAY DIFFRACTION' ? 0.93 ? 2469 ? t_angle_deg 2 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 648 ? t_dihedral_angle_d 2 SINUSOIDAL 'X-RAY DIFFRACTION' ? ? ? 341 ? t_gen_planes 5 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 1813 ? t_it 10 HARMONIC 'X-RAY DIFFRACTION' ? ? ? 240 ? t_chiral_improper_torsion 5 SEMIHARMONIC 'X-RAY DIFFRACTION' ? ? ? 1471 ? t_ideal_dist_contact 4 SEMIHARMONIC 'X-RAY DIFFRACTION' ? 2.46 ? ? ? t_omega_torsion ? ? 'X-RAY DIFFRACTION' ? 20.42 ? ? ? t_other_torsion ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.504 _refine_ls_shell.d_res_low 2.74 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 18 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.percent_reflns_obs 17.95 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.2015 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2832 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_R_complete ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 8D8I _struct.title 'Crystal structure of Reverb alpha in complex with synthetic agonist' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8D8I _struct_keywords.text 'REV-ERB, Nuclear receptor, Agonist, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP NR1D1_HUMAN P20393 ? 1 PEPTVEDVISQVARAHREIFTYAHDKLGSSPGNFNANHASGSP 281 2 UNP NR1D1_HUMAN P20393 ? 1 ;HGRSGRTVQEIWEDFSMSFTPAVREVVEFAKHIPGFRDLSQHDQVTLLKAGTFEVLMVRFASLFNVKDQTVMFLSRTTYS LQELGAMGMGDLLSAMFDFSEKLNSLALTEEELGLFTAVVLVSADRSGMENSASVEQLQETLLRALRALVLKNRPLETSR FTKLLLKLPDLRTLNNMHSEKLLSFRVDAQ ; 425 3 UNP NCOR1_HUMAN O75376 ? 2 THRLITLADHICQIITQDFA 2045 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8D8I A 5 ? 47 ? P20393 281 ? 323 ? 281 424 2 2 8D8I A 48 ? 237 ? P20393 425 ? 614 ? 425 614 3 3 8D8I B 1 ? 20 ? O75376 2045 ? 2064 ? 2045 2064 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 8D8I GLY A 1 ? UNP P20393 ? ? 'expression tag' 277 1 1 8D8I SER A 2 ? UNP P20393 ? ? 'expression tag' 278 2 1 8D8I HIS A 3 ? UNP P20393 ? ? 'expression tag' 279 3 1 8D8I MET A 4 ? UNP P20393 ? ? 'expression tag' 280 4 3 8D8I ALA B 12 ? UNP O75376 CYS 2056 'engineered mutation' 2056 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2130 ? 1 MORE -18 ? 1 'SSA (A^2)' 10520 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'mass spectrometry' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 THR A 8 ? PHE A 24 ? THR A 284 PHE A 300 1 ? 17 HELX_P HELX_P2 AA2 THR A 54 ? HIS A 79 ? THR A 431 HIS A 456 1 ? 26 HELX_P HELX_P3 AA3 SER A 87 ? ALA A 108 ? SER A 464 ALA A 485 1 ? 22 HELX_P HELX_P4 AA4 GLN A 129 ? MET A 134 ? GLN A 506 MET A 511 5 ? 6 HELX_P HELX_P5 AA5 GLY A 137 ? SER A 152 ? GLY A 514 SER A 529 1 ? 16 HELX_P HELX_P6 AA6 THR A 156 ? SER A 170 ? THR A 533 SER A 547 1 ? 15 HELX_P HELX_P7 AA7 ASN A 178 ? ARG A 201 ? ASN A 555 ARG A 578 1 ? 24 HELX_P HELX_P8 AA8 SER A 206 ? LEU A 213 ? SER A 583 LEU A 590 1 ? 8 HELX_P HELX_P9 AA9 LEU A 213 ? SER A 226 ? LEU A 590 SER A 603 1 ? 14 HELX_P HELX_P10 AB1 LEU B 7 ? PHE B 19 ? LEU B 2051 PHE B 2063 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 111 ? ASN A 112 ? PHE A 488 ASN A 489 AA1 2 THR A 117 ? MET A 119 ? THR A 494 MET A 496 AA1 3 THR A 125 ? SER A 127 ? THR A 502 SER A 504 AA2 1 LEU A 229 ? ARG A 233 ? LEU A 606 ARG A 610 AA2 2 HIS B 2 ? THR B 6 ? HIS B 2046 THR B 2050 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 112 ? N ASN A 489 O THR A 117 ? O THR A 494 AA1 2 3 N VAL A 118 ? N VAL A 495 O TYR A 126 ? O TYR A 503 AA2 1 2 N PHE A 232 ? N PHE A 609 O ARG B 3 ? O ARG B 2047 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 300 ? ? -85.20 -72.61 2 1 PRO A 458 ? ? -52.42 107.29 3 1 LEU A 498 ? ? -59.98 -6.43 4 1 MET A 513 ? ? 9.84 -101.48 5 1 PHE B 2063 ? ? -95.19 34.77 # _pdbx_entry_details.entry_id 8D8I _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 277 ? A GLY 1 2 1 Y 1 A SER 278 ? A SER 2 3 1 Y 1 A HIS 279 ? A HIS 3 4 1 Y 1 A MET 280 ? A MET 4 5 1 Y 1 A PRO 281 ? A PRO 5 6 1 Y 1 A GLU 282 ? A GLU 6 7 1 Y 1 A TYR 403 ? A TYR 26 8 1 Y 1 A ALA 404 ? A ALA 27 9 1 Y 1 A HIS 405 ? A HIS 28 10 1 Y 1 A ASP 406 ? A ASP 29 11 1 Y 1 A LYS 407 ? A LYS 30 12 1 Y 1 A LEU 408 ? A LEU 31 13 1 Y 1 A GLY 409 ? A GLY 32 14 1 Y 1 A SER 410 ? A SER 33 15 1 Y 1 A SER 411 ? A SER 34 16 1 Y 1 A PRO 412 ? A PRO 35 17 1 Y 1 A GLY 413 ? A GLY 36 18 1 Y 1 A ASN 414 ? A ASN 37 19 1 Y 1 A PHE 415 ? A PHE 38 20 1 Y 1 A ASN 416 ? A ASN 39 21 1 Y 1 A ALA 417 ? A ALA 40 22 1 Y 1 A ASN 418 ? A ASN 41 23 1 Y 1 A HIS 419 ? A HIS 42 24 1 Y 1 A ALA 420 ? A ALA 43 25 1 Y 1 A SER 421 ? A SER 44 26 1 Y 1 A GLY 422 ? A GLY 45 27 1 Y 1 A SER 423 ? A SER 46 28 1 Y 1 A PRO 424 ? A PRO 47 29 1 Y 1 A HIS 425 ? A HIS 48 30 1 Y 1 A GLY 426 ? A GLY 49 31 1 Y 1 A ARG 427 ? A ARG 50 32 1 Y 1 A SER 428 ? A SER 51 33 1 Y 1 A GLY 429 ? A GLY 52 34 1 Y 1 A ASP 612 ? A ASP 235 35 1 Y 1 A ALA 613 ? A ALA 236 36 1 Y 1 A GLN 614 ? A GLN 237 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 QFX N1 N Y N 290 QFX N3 N Y N 291 QFX C4 C Y N 292 QFX C5 C Y N 293 QFX C6 C Y N 294 QFX C7 C Y N 295 QFX C8 C Y N 296 QFX C10 C Y N 297 QFX C13 C Y N 298 QFX C15 C Y N 299 QFX C17 C Y N 300 QFX C1 C Y N 301 QFX C2 C Y N 302 QFX C3 C Y N 303 QFX N2 N Y N 304 QFX N4 N Y N 305 QFX O1 O N N 306 QFX C9 C Y N 307 QFX C11 C Y N 308 QFX C12 C Y N 309 QFX C14 C Y N 310 QFX C16 C Y N 311 QFX CL1 CL N N 312 QFX H3 H N N 313 QFX H5 H N N 314 QFX H7 H N N 315 QFX H9 H N N 316 QFX H11 H N N 317 QFX H1 H N N 318 QFX H2 H N N 319 QFX H4 H N N 320 QFX H6 H N N 321 QFX H8 H N N 322 QFX H10 H N N 323 SER N N N N 324 SER CA C N S 325 SER C C N N 326 SER O O N N 327 SER CB C N N 328 SER OG O N N 329 SER OXT O N N 330 SER H H N N 331 SER H2 H N N 332 SER HA H N N 333 SER HB2 H N N 334 SER HB3 H N N 335 SER HG H N N 336 SER HXT H N N 337 THR N N N N 338 THR CA C N S 339 THR C C N N 340 THR O O N N 341 THR CB C N R 342 THR OG1 O N N 343 THR CG2 C N N 344 THR OXT O N N 345 THR H H N N 346 THR H2 H N N 347 THR HA H N N 348 THR HB H N N 349 THR HG1 H N N 350 THR HG21 H N N 351 THR HG22 H N N 352 THR HG23 H N N 353 THR HXT H N N 354 TRP N N N N 355 TRP CA C N S 356 TRP C C N N 357 TRP O O N N 358 TRP CB C N N 359 TRP CG C Y N 360 TRP CD1 C Y N 361 TRP CD2 C Y N 362 TRP NE1 N Y N 363 TRP CE2 C Y N 364 TRP CE3 C Y N 365 TRP CZ2 C Y N 366 TRP CZ3 C Y N 367 TRP CH2 C Y N 368 TRP OXT O N N 369 TRP H H N N 370 TRP H2 H N N 371 TRP HA H N N 372 TRP HB2 H N N 373 TRP HB3 H N N 374 TRP HD1 H N N 375 TRP HE1 H N N 376 TRP HE3 H N N 377 TRP HZ2 H N N 378 TRP HZ3 H N N 379 TRP HH2 H N N 380 TRP HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 VAL N N N N 406 VAL CA C N S 407 VAL C C N N 408 VAL O O N N 409 VAL CB C N N 410 VAL CG1 C N N 411 VAL CG2 C N N 412 VAL OXT O N N 413 VAL H H N N 414 VAL H2 H N N 415 VAL HA H N N 416 VAL HB H N N 417 VAL HG11 H N N 418 VAL HG12 H N N 419 VAL HG13 H N N 420 VAL HG21 H N N 421 VAL HG22 H N N 422 VAL HG23 H N N 423 VAL HXT H N N 424 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 QFX N3 N4 sing Y N 277 QFX N3 C4 doub Y N 278 QFX N4 C5 doub Y N 279 QFX C4 C3 sing Y N 280 QFX C4 N2 sing Y N 281 QFX C3 C2 doub Y N 282 QFX C5 N2 sing Y N 283 QFX C5 CL1 sing N N 284 QFX N2 N1 sing Y N 285 QFX C2 C1 sing Y N 286 QFX N1 C1 doub Y N 287 QFX C1 O1 sing N N 288 QFX C11 C10 doub Y N 289 QFX C11 C6 sing Y N 290 QFX O1 C6 sing N N 291 QFX C10 C9 sing Y N 292 QFX C6 C7 doub Y N 293 QFX C9 C8 doub Y N 294 QFX C7 C8 sing Y N 295 QFX C7 C12 sing N N 296 QFX C12 C17 doub Y N 297 QFX C12 C13 sing Y N 298 QFX C17 C16 sing Y N 299 QFX C13 C14 doub Y N 300 QFX C16 C15 doub Y N 301 QFX C14 C15 sing Y N 302 QFX C8 H3 sing N N 303 QFX C10 H5 sing N N 304 QFX C13 H7 sing N N 305 QFX C15 H9 sing N N 306 QFX C17 H11 sing N N 307 QFX C2 H1 sing N N 308 QFX C3 H2 sing N N 309 QFX C9 H4 sing N N 310 QFX C11 H6 sing N N 311 QFX C14 H8 sing N N 312 QFX C16 H10 sing N N 313 SER N CA sing N N 314 SER N H sing N N 315 SER N H2 sing N N 316 SER CA C sing N N 317 SER CA CB sing N N 318 SER CA HA sing N N 319 SER C O doub N N 320 SER C OXT sing N N 321 SER CB OG sing N N 322 SER CB HB2 sing N N 323 SER CB HB3 sing N N 324 SER OG HG sing N N 325 SER OXT HXT sing N N 326 THR N CA sing N N 327 THR N H sing N N 328 THR N H2 sing N N 329 THR CA C sing N N 330 THR CA CB sing N N 331 THR CA HA sing N N 332 THR C O doub N N 333 THR C OXT sing N N 334 THR CB OG1 sing N N 335 THR CB CG2 sing N N 336 THR CB HB sing N N 337 THR OG1 HG1 sing N N 338 THR CG2 HG21 sing N N 339 THR CG2 HG22 sing N N 340 THR CG2 HG23 sing N N 341 THR OXT HXT sing N N 342 TRP N CA sing N N 343 TRP N H sing N N 344 TRP N H2 sing N N 345 TRP CA C sing N N 346 TRP CA CB sing N N 347 TRP CA HA sing N N 348 TRP C O doub N N 349 TRP C OXT sing N N 350 TRP CB CG sing N N 351 TRP CB HB2 sing N N 352 TRP CB HB3 sing N N 353 TRP CG CD1 doub Y N 354 TRP CG CD2 sing Y N 355 TRP CD1 NE1 sing Y N 356 TRP CD1 HD1 sing N N 357 TRP CD2 CE2 doub Y N 358 TRP CD2 CE3 sing Y N 359 TRP NE1 CE2 sing Y N 360 TRP NE1 HE1 sing N N 361 TRP CE2 CZ2 sing Y N 362 TRP CE3 CZ3 doub Y N 363 TRP CE3 HE3 sing N N 364 TRP CZ2 CH2 doub Y N 365 TRP CZ2 HZ2 sing N N 366 TRP CZ3 CH2 sing Y N 367 TRP CZ3 HZ3 sing N N 368 TRP CH2 HH2 sing N N 369 TRP OXT HXT sing N N 370 TYR N CA sing N N 371 TYR N H sing N N 372 TYR N H2 sing N N 373 TYR CA C sing N N 374 TYR CA CB sing N N 375 TYR CA HA sing N N 376 TYR C O doub N N 377 TYR C OXT sing N N 378 TYR CB CG sing N N 379 TYR CB HB2 sing N N 380 TYR CB HB3 sing N N 381 TYR CG CD1 doub Y N 382 TYR CG CD2 sing Y N 383 TYR CD1 CE1 sing Y N 384 TYR CD1 HD1 sing N N 385 TYR CD2 CE2 doub Y N 386 TYR CD2 HD2 sing N N 387 TYR CE1 CZ doub Y N 388 TYR CE1 HE1 sing N N 389 TYR CE2 CZ sing Y N 390 TYR CE2 HE2 sing N N 391 TYR CZ OH sing N N 392 TYR OH HH sing N N 393 TYR OXT HXT sing N N 394 VAL N CA sing N N 395 VAL N H sing N N 396 VAL N H2 sing N N 397 VAL CA C sing N N 398 VAL CA CB sing N N 399 VAL CA HA sing N N 400 VAL C O doub N N 401 VAL C OXT sing N N 402 VAL CB CG1 sing N N 403 VAL CB CG2 sing N N 404 VAL CB HB sing N N 405 VAL CG1 HG11 sing N N 406 VAL CG1 HG12 sing N N 407 VAL CG1 HG13 sing N N 408 VAL CG2 HG21 sing N N 409 VAL CG2 HG22 sing N N 410 VAL CG2 HG23 sing N N 411 VAL OXT HXT sing N N 412 # _pdbx_audit_support.funding_organization 'Not funded' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number W81XWH-19-1-0632 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id QFX _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id QFX _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'In house structure' # _atom_sites.entry_id 8D8I _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.fract_transf_matrix[1][1] 0.008690 _atom_sites.fract_transf_matrix[1][2] 0.005017 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010035 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009318 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CL H N O S # loop_