HEADER OXIDOREDUCTASE 23-JUN-22 8DG0 TITLE CRYSTAL STRUCTURE OF ECDSBA IN A COMPLEX WITH UREA COMPND MOL_ID: 1; COMPND 2 MOLECULE: THIOL:DISULFIDE INTERCHANGE PROTEIN DSBA; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI K-12; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: DSBA, DSF, PPFA, B3860, JW3832; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: B0013 KEYWDS DISULFIDE OXIDOREDUCTASE, REDOX PROTEIN, MICROFRAG SCREENING, FBDD, KEYWDS 2 FRAGMENT, ANTIMICROBIAL PROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.L.WHITEHOUSE,O.V.ILYICHOVA,A.J.TAYLOR REVDAT 4 13-NOV-24 8DG0 1 REMARK REVDAT 3 25-OCT-23 8DG0 1 REMARK REVDAT 2 22-FEB-23 8DG0 1 JRNL REVDAT 1 07-DEC-22 8DG0 0 JRNL AUTH R.L.WHITEHOUSE,W.S.ALWAN,O.V.ILYICHOVA,A.J.TAYLOR, JRNL AUTH 2 I.R.CHANDRASHEKARAN,B.MOHANTY,B.C.DOAK,M.J.SCANLON JRNL TITL FRAGMENT SCREENING LIBRARIES FOR THE IDENTIFICATION OF JRNL TITL 2 PROTEIN HOT SPOTS AND THEIR MINIMAL BINDING PHARMACOPHORES. JRNL REF RSC MED CHEM V. 14 135 2023 JRNL REFN ESSN 2632-8682 JRNL PMID 36760747 JRNL DOI 10.1039/D2MD00253A REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19_4092 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 15860 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 807 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4600 - 4.5400 1.00 2557 150 0.1595 0.2048 REMARK 3 2 4.5400 - 3.6100 1.00 2521 132 0.1709 0.2436 REMARK 3 3 3.6100 - 3.1500 1.00 2525 94 0.2337 0.2894 REMARK 3 4 3.1500 - 2.8600 1.00 2474 167 0.2570 0.2976 REMARK 3 5 2.8600 - 2.6600 1.00 2463 144 0.2711 0.3478 REMARK 3 6 2.6600 - 2.5000 1.00 2513 120 0.2932 0.3426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.405 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.387 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 47.12 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2849 REMARK 3 ANGLE : 0.926 3876 REMARK 3 CHIRALITY : 0.052 437 REMARK 3 PLANARITY : 0.007 509 REMARK 3 DIHEDRAL : 4.168 385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 7 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6693 -5.6123 -9.3659 REMARK 3 T TENSOR REMARK 3 T11: 1.1346 T22: 0.7247 REMARK 3 T33: 0.6923 T12: -0.2615 REMARK 3 T13: 0.2138 T23: -0.1662 REMARK 3 L TENSOR REMARK 3 L11: 6.5604 L22: 5.8765 REMARK 3 L33: 6.9554 L12: -0.2422 REMARK 3 L13: 2.2764 L23: -0.8337 REMARK 3 S TENSOR REMARK 3 S11: -0.5183 S12: 0.3696 S13: -0.5408 REMARK 3 S21: -2.2661 S22: 0.5571 S23: -1.2063 REMARK 3 S31: -0.9481 S32: 0.7341 S33: -0.0034 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 22 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.8467 -10.8601 6.7951 REMARK 3 T TENSOR REMARK 3 T11: 0.4635 T22: 0.4008 REMARK 3 T33: 0.4373 T12: -0.0676 REMARK 3 T13: -0.0017 T23: -0.0496 REMARK 3 L TENSOR REMARK 3 L11: 1.6651 L22: 4.1052 REMARK 3 L33: 3.0034 L12: 1.1779 REMARK 3 L13: 0.9753 L23: 1.0252 REMARK 3 S TENSOR REMARK 3 S11: 0.1192 S12: -0.2889 S13: -0.0946 REMARK 3 S21: 0.1207 S22: -0.0088 S23: -0.2268 REMARK 3 S31: 0.3038 S32: -0.0485 S33: -0.1001 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 56 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2200 0.0812 16.1442 REMARK 3 T TENSOR REMARK 3 T11: 0.3427 T22: 0.2417 REMARK 3 T33: 0.3459 T12: -0.0381 REMARK 3 T13: -0.0002 T23: -0.0330 REMARK 3 L TENSOR REMARK 3 L11: 2.3432 L22: 1.2369 REMARK 3 L33: 3.6984 L12: 0.4096 REMARK 3 L13: 0.2589 L23: -0.2433 REMARK 3 S TENSOR REMARK 3 S11: 0.0116 S12: 0.0006 S13: 0.1659 REMARK 3 S21: -0.0594 S22: -0.0230 S23: -0.0576 REMARK 3 S31: -0.1595 S32: 0.1616 S33: 0.0204 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3085 -12.1873 -3.2818 REMARK 3 T TENSOR REMARK 3 T11: 0.6716 T22: 0.5297 REMARK 3 T33: 0.5029 T12: -0.0621 REMARK 3 T13: 0.0140 T23: -0.0621 REMARK 3 L TENSOR REMARK 3 L11: 2.2288 L22: 4.7380 REMARK 3 L33: 2.7061 L12: 1.8360 REMARK 3 L13: -0.2347 L23: 0.9564 REMARK 3 S TENSOR REMARK 3 S11: -0.3565 S12: 0.3817 S13: -0.4457 REMARK 3 S21: -1.0026 S22: 0.2330 S23: -0.1305 REMARK 3 S31: 0.2095 S32: 0.0638 S33: 0.0739 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 2 THROUGH 11 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4563 13.7750 23.8347 REMARK 3 T TENSOR REMARK 3 T11: 1.4043 T22: 0.6321 REMARK 3 T33: 1.3401 T12: 0.2665 REMARK 3 T13: 0.2526 T23: 0.1569 REMARK 3 L TENSOR REMARK 3 L11: 0.8341 L22: 0.5090 REMARK 3 L33: 3.6381 L12: 0.4909 REMARK 3 L13: 0.5163 L23: 0.7933 REMARK 3 S TENSOR REMARK 3 S11: -0.7518 S12: 0.3048 S13: 0.8370 REMARK 3 S21: -0.2955 S22: -0.6298 S23: 0.1783 REMARK 3 S31: -2.3769 S32: -0.5405 S33: 1.1914 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 12 THROUGH 21 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1950 5.6594 14.8234 REMARK 3 T TENSOR REMARK 3 T11: 0.9201 T22: 1.1292 REMARK 3 T33: 0.8184 T12: 0.4002 REMARK 3 T13: 0.0189 T23: 0.0155 REMARK 3 L TENSOR REMARK 3 L11: 3.4009 L22: 2.9836 REMARK 3 L33: 0.4899 L12: 1.7161 REMARK 3 L13: 0.2641 L23: 0.5154 REMARK 3 S TENSOR REMARK 3 S11: 0.3449 S12: 0.5461 S13: 1.0785 REMARK 3 S21: -0.2447 S22: -0.3324 S23: 0.8699 REMARK 3 S31: -0.6630 S32: -0.6556 S33: 0.0426 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 22 THROUGH 38 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.3004 -6.7099 19.4539 REMARK 3 T TENSOR REMARK 3 T11: 0.4229 T22: 0.4563 REMARK 3 T33: 0.4185 T12: -0.0405 REMARK 3 T13: 0.0263 T23: 0.0259 REMARK 3 L TENSOR REMARK 3 L11: 2.8977 L22: 2.8759 REMARK 3 L33: 4.5366 L12: 1.5425 REMARK 3 L13: 0.6912 L23: 0.4457 REMARK 3 S TENSOR REMARK 3 S11: 0.1716 S12: -0.0315 S13: -0.1315 REMARK 3 S21: 0.2685 S22: -0.0833 S23: 0.0744 REMARK 3 S31: -0.3149 S32: -0.4189 S33: -0.0799 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 39 THROUGH 49 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1118 -4.1830 31.1119 REMARK 3 T TENSOR REMARK 3 T11: 0.4919 T22: 0.5043 REMARK 3 T33: 0.5405 T12: -0.0395 REMARK 3 T13: 0.1456 T23: -0.0559 REMARK 3 L TENSOR REMARK 3 L11: 5.9954 L22: 2.9956 REMARK 3 L33: 2.7245 L12: 1.7676 REMARK 3 L13: -0.9373 L23: -0.2541 REMARK 3 S TENSOR REMARK 3 S11: 0.3108 S12: -0.7632 S13: -0.3673 REMARK 3 S21: 0.6167 S22: -0.1820 S23: 1.0458 REMARK 3 S31: 0.2280 S32: -0.3981 S33: 0.0271 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 50 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0048 -5.6538 18.1812 REMARK 3 T TENSOR REMARK 3 T11: 0.4226 T22: 0.5659 REMARK 3 T33: 0.5155 T12: -0.0213 REMARK 3 T13: -0.0629 T23: -0.0025 REMARK 3 L TENSOR REMARK 3 L11: 1.5978 L22: 5.8090 REMARK 3 L33: 2.7494 L12: 0.4163 REMARK 3 L13: 1.8104 L23: 2.4816 REMARK 3 S TENSOR REMARK 3 S11: -0.0250 S12: -0.2286 S13: 0.3622 REMARK 3 S21: 0.0384 S22: -0.3731 S23: 0.4439 REMARK 3 S31: 0.0066 S32: -0.5384 S33: 0.4641 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 67 THROUGH 145 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1571 -18.0560 13.7164 REMARK 3 T TENSOR REMARK 3 T11: 0.3309 T22: 0.4315 REMARK 3 T33: 0.2927 T12: -0.0523 REMARK 3 T13: 0.0146 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 3.3419 L22: 4.0582 REMARK 3 L33: 3.0847 L12: 1.7240 REMARK 3 L13: -2.0049 L23: -0.9087 REMARK 3 S TENSOR REMARK 3 S11: -0.0266 S12: 0.3140 S13: -0.3401 REMARK 3 S21: -0.0435 S22: -0.0869 S23: 0.0713 REMARK 3 S31: 0.0738 S32: -0.3117 S33: 0.1534 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 146 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3391 5.2163 20.7083 REMARK 3 T TENSOR REMARK 3 T11: 0.7417 T22: 0.5159 REMARK 3 T33: 0.8001 T12: 0.1351 REMARK 3 T13: 0.1964 T23: 0.0309 REMARK 3 L TENSOR REMARK 3 L11: 1.2242 L22: 3.0427 REMARK 3 L33: 5.5671 L12: 0.7484 REMARK 3 L13: -0.1815 L23: 0.7018 REMARK 3 S TENSOR REMARK 3 S11: -0.0359 S12: -0.2311 S13: 0.8696 REMARK 3 S21: 0.0059 S22: 0.1342 S23: 0.2630 REMARK 3 S31: -1.4320 S32: -0.8283 S33: -0.0214 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 171 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.2539 5.6348 30.2770 REMARK 3 T TENSOR REMARK 3 T11: 0.7056 T22: 0.6203 REMARK 3 T33: 0.7572 T12: 0.1547 REMARK 3 T13: 0.2250 T23: -0.1198 REMARK 3 L TENSOR REMARK 3 L11: 2.5482 L22: 2.8859 REMARK 3 L33: 4.9460 L12: 1.5175 REMARK 3 L13: 0.5599 L23: 0.2144 REMARK 3 S TENSOR REMARK 3 S11: 0.5373 S12: -0.0176 S13: 1.0283 REMARK 3 S21: 0.1741 S22: -0.3247 S23: 0.0947 REMARK 3 S31: -0.8896 S32: -0.7827 S33: -0.2609 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "A" and (resid 7 through 15 or REMARK 3 (resid 16 through 17 and (name N or name REMARK 3 CA or name C or name O or name CB )) or REMARK 3 resid 18 through 37 or (resid 38 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 39 through 69 or REMARK 3 (resid 70 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 71 REMARK 3 through 117 or (resid 118 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 119 through 131 or (resid 132 REMARK 3 and (name N or name CA or name C or name REMARK 3 O or name CB )) or resid 133 through 139 REMARK 3 or (resid 140 and (name N or name CA or REMARK 3 name C or name O or name CB or name CG )) REMARK 3 or resid 141 through 188 or resid 504)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and (resid 7 through 20 or REMARK 3 (resid 21 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 22 REMARK 3 through 46 or (resid 47 through 48 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 49 through 102 or REMARK 3 (resid 103 and (name N or name CA or name REMARK 3 C or name O or name CB or name CG or name REMARK 3 CD )) or resid 104 through 182 or (resid REMARK 3 183 and (name N or name CA or name C or REMARK 3 name O or name CB )) or resid 184 through REMARK 3 188 or resid 302)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 8DG0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-JUN-22. REMARK 100 THE DEPOSITION ID IS D_1000266576. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-AUG-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95372 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17916 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 48.850 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 1.49700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1FVK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.72 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-13 % PEG 8000, 5-7.5% GLYCEROL, REMARK 280 100MM NA CACODYLATE PH6.1, 1MM CUCL2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.17050 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.16200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.17050 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.16200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 GLN A 2 REMARK 465 TYR A 3 REMARK 465 GLU A 4 REMARK 465 ASP A 5 REMARK 465 GLY A 6 REMARK 465 LYS A 189 REMARK 465 ALA B 1 REMARK 465 LYS B 189 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 7 CG CD CE NZ REMARK 470 GLU A 13 CG CD OE1 OE2 REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 GLN A 21 CG CD OE1 NE2 REMARK 470 LYS A 47 CG CD CE NZ REMARK 470 LYS A 48 CG CD CE NZ REMARK 470 GLU A 52 CG CD OE1 OE2 REMARK 470 LYS A 55 CG CD CE NZ REMARK 470 ARG A 103 NE CZ NH1 NH2 REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 470 GLN A 146 CG CD OE1 NE2 REMARK 470 ARG A 148 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 158 CG CD CE NZ REMARK 470 GLN A 164 CG CD OE1 NE2 REMARK 470 LYS A 183 CG CD CE NZ REMARK 470 GLN B 2 CG CD OE1 NE2 REMARK 470 GLU B 4 CG CD OE1 OE2 REMARK 470 LYS B 7 CG CD CE NZ REMARK 470 GLU B 13 CG CD OE1 OE2 REMARK 470 LYS B 14 CG CD CE NZ REMARK 470 VAL B 16 CG1 CG2 REMARK 470 GLU B 38 CG CD OE1 OE2 REMARK 470 GLU B 52 CG CD OE1 OE2 REMARK 470 LYS B 55 CG CD CE NZ REMARK 470 LYS B 70 CG CD CE NZ REMARK 470 LYS B 118 CG CD CE NZ REMARK 470 GLU B 120 CG CD OE1 OE2 REMARK 470 LYS B 132 CG CD CE NZ REMARK 470 LYS B 140 CD CE NZ REMARK 470 GLN B 146 CG CD OE1 NE2 REMARK 470 ARG B 148 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 158 CG CD CE NZ REMARK 470 GLN B 164 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 30 CA - CB - SG ANGL. DEV. = 8.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 49 30.01 -90.18 REMARK 500 GLU A 52 0.34 -65.24 REMARK 500 LYS A 98 -65.45 -94.52 REMARK 500 LYS A 158 -39.63 -131.93 REMARK 500 TYR B 3 60.81 -156.36 REMARK 500 GLU B 52 1.12 -66.33 REMARK 500 LYS B 98 -65.26 -97.95 REMARK 500 LYS B 158 -40.86 -132.76 REMARK 500 REMARK 500 REMARK: NULL DBREF 8DG0 A 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 DBREF 8DG0 B 1 189 UNP P0AEG4 DSBA_ECOLI 20 208 SEQRES 1 A 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU SEQRES 2 A 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE SEQRES 3 A 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL SEQRES 4 A 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU SEQRES 5 A 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY SEQRES 6 A 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL SEQRES 7 A 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO SEQRES 8 A 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER SEQRES 9 A 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE SEQRES 10 A 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL SEQRES 11 A 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA SEQRES 12 A 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN SEQRES 13 A 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER SEQRES 14 A 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL SEQRES 15 A 189 LYS TYR LEU SER GLU LYS LYS SEQRES 1 B 189 ALA GLN TYR GLU ASP GLY LYS GLN TYR THR THR LEU GLU SEQRES 2 B 189 LYS PRO VAL ALA GLY ALA PRO GLN VAL LEU GLU PHE PHE SEQRES 3 B 189 SER PHE PHE CYS PRO HIS CYS TYR GLN PHE GLU GLU VAL SEQRES 4 B 189 LEU HIS ILE SER ASP ASN VAL LYS LYS LYS LEU PRO GLU SEQRES 5 B 189 GLY VAL LYS MET THR LYS TYR HIS VAL ASN PHE MET GLY SEQRES 6 B 189 GLY ASP LEU GLY LYS ASP LEU THR GLN ALA TRP ALA VAL SEQRES 7 B 189 ALA MET ALA LEU GLY VAL GLU ASP LYS VAL THR VAL PRO SEQRES 8 B 189 LEU PHE GLU GLY VAL GLN LYS THR GLN THR ILE ARG SER SEQRES 9 B 189 ALA SER ASP ILE ARG ASP VAL PHE ILE ASN ALA GLY ILE SEQRES 10 B 189 LYS GLY GLU GLU TYR ASP ALA ALA TRP ASN SER PHE VAL SEQRES 11 B 189 VAL LYS SER LEU VAL ALA GLN GLN GLU LYS ALA ALA ALA SEQRES 12 B 189 ASP VAL GLN LEU ARG GLY VAL PRO ALA MET PHE VAL ASN SEQRES 13 B 189 GLY LYS TYR GLN LEU ASN PRO GLN GLY MET ASP THR SER SEQRES 14 B 189 ASN MET ASP VAL PHE VAL GLN GLN TYR ALA ASP THR VAL SEQRES 15 B 189 LYS TYR LEU SER GLU LYS LYS HET URE A 201 4 HET URE A 202 4 HET URE A 203 4 HET URE A 204 4 HET CU B 201 1 HET CU B 202 1 HET URE B 203 4 HETNAM URE UREA HETNAM CU COPPER (II) ION FORMUL 3 URE 5(C H4 N2 O) FORMUL 7 CU 2(CU 2+) FORMUL 10 HOH *25(H2 O) HELIX 1 AA1 CYS A 30 VAL A 39 1 10 HELIX 2 AA2 HIS A 41 LYS A 49 1 9 HELIX 3 AA3 GLY A 66 GLY A 83 1 18 HELIX 4 AA4 VAL A 84 LYS A 98 1 15 HELIX 5 AA5 SER A 104 ALA A 115 1 12 HELIX 6 AA6 LYS A 118 SER A 128 1 11 HELIX 7 AA7 SER A 128 VAL A 145 1 18 HELIX 8 AA8 PRO A 163 MET A 166 5 4 HELIX 9 AA9 ASN A 170 GLU A 187 1 18 HELIX 10 AB1 CYS B 30 VAL B 39 1 10 HELIX 11 AB2 HIS B 41 LEU B 50 1 10 HELIX 12 AB3 GLY B 66 GLY B 83 1 18 HELIX 13 AB4 VAL B 84 LYS B 98 1 15 HELIX 14 AB5 SER B 104 ALA B 115 1 12 HELIX 15 AB6 LYS B 118 SER B 128 1 11 HELIX 16 AB7 SER B 128 VAL B 145 1 18 HELIX 17 AB8 PRO B 163 MET B 166 5 4 HELIX 18 AB9 ASN B 170 GLU B 187 1 18 SHEET 1 AA1 5 TYR A 9 THR A 11 0 SHEET 2 AA1 5 TYR A 159 LEU A 161 -1 O GLN A 160 N THR A 10 SHEET 3 AA1 5 ALA A 152 VAL A 155 -1 N VAL A 155 O TYR A 159 SHEET 4 AA1 5 VAL A 22 PHE A 26 -1 N LEU A 23 O PHE A 154 SHEET 5 AA1 5 MET A 56 HIS A 60 1 O THR A 57 N GLU A 24 SHEET 1 AA2 5 TYR B 9 THR B 11 0 SHEET 2 AA2 5 TYR B 159 LEU B 161 -1 O GLN B 160 N THR B 10 SHEET 3 AA2 5 ALA B 152 VAL B 155 -1 N VAL B 155 O TYR B 159 SHEET 4 AA2 5 VAL B 22 PHE B 26 -1 N LEU B 23 O PHE B 154 SHEET 5 AA2 5 MET B 56 HIS B 60 1 O THR B 57 N VAL B 22 SSBOND 1 CYS A 30 CYS A 33 1555 1555 2.06 SSBOND 2 CYS B 30 CYS B 33 1555 1555 2.09 LINK NE2 HIS B 41 CU CU B 202 1555 1555 2.14 LINK OD2 ASP B 44 CU CU B 201 1555 4546 2.36 CISPEP 1 VAL A 150 PRO A 151 0 -1.77 CISPEP 2 VAL B 150 PRO B 151 0 -1.19 CRYST1 116.341 64.324 75.346 90.00 125.32 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008595 0.000000 0.006090 0.00000 SCALE2 0.000000 0.015546 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016266 0.00000 MTRIX1 1 -0.959843 0.065368 0.272816 34.41261 1 MTRIX2 1 -0.276936 -0.065464 -0.958656 8.70136 1 MTRIX3 1 -0.044805 -0.995712 0.080938 14.05269 1